View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17649_high_17 (Length: 412)
Name: NF17649_high_17
Description: NF17649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17649_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 375; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 14 - 396
Target Start/End: Original strand, 30146910 - 30147292
Alignment:
| Q |
14 |
aaaatatatatgaatatagtgttggaaaccctagccgacttcactgcggctagattgggttgccagtttaatagacaaagtttgtcttatatgccatttt |
113 |
Q |
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| T |
30146910 |
aaaatatatatgaatatagtgttggaaaccctagccgacttcactgcggctagattgggttgccagtttaatagacaaagtttgtcttatatgccatttt |
30147009 |
T |
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| Q |
114 |
ttaggagagggtactgttttccaatataaatatatgtactcatcatcaaatgatgaatgatatttcttctccacacgtactttcaaactgtttatataat |
213 |
Q |
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| T |
30147010 |
ttaggagagggtactgttttccaatataaatatatgtactcatcatcaaatgatgaatgatatttcttctccacacatgctttcaaactgtttatataat |
30147109 |
T |
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| Q |
214 |
taaattaaatccatacataattttattcagatatggtcaagaataaaggcttcttgccatcaggaccttcagaaatacatttacaaagaagtcaaatcag |
313 |
Q |
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| T |
30147110 |
taaattaaatccatacataattttattcagatatggtcaagaataaaggcttcttgccatcaggaccttcagaaatacatttacaaagaagtcaaatcag |
30147209 |
T |
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| Q |
314 |
ggctattattcactctttgcttcctgcatgcaacagccggtacccagaatctaatgaaccatttaaagcagatgcaataattg |
396 |
Q |
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| T |
30147210 |
ggctattattcactctttgcttcctgcatgcaacagccggtacccagaatctaatgaaccatttaaagcagatgcaataattg |
30147292 |
T |
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