View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17649_high_55 (Length: 242)
Name: NF17649_high_55
Description: NF17649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17649_high_55 |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 47285589 - 47285811
Alignment:
| Q |
1 |
tctgattcattccaaaagaatgtgtagtaaacgacggtgccaataacctaacggaaacttcacttgccgaagcaaacttagctaccgtaaatgtcacata |
100 |
Q |
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| T |
47285589 |
tctgattcattccaaaagaatgtgtagtaaacgacggtgccaataacctaacggaaacttcacttgccgaagcaaacttagctaccgtaaatgtcacata |
47285688 |
T |
|
| Q |
101 |
ataaaacaccctataccctaaaattttattggtgacatgccaaatcgttggccgcaccagatcaaactccaacgacaaatagggcggagaaaatgcctct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
47285689 |
ataaaacaccctataccctaaaattttattggtgacatgccaaatcgttggccgcactagatcaaactccaacgacaaatagggcggagaaaatgcctct |
47285788 |
T |
|
| Q |
201 |
aagcttaaatcggttggaaattc |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
47285789 |
aagcttaaatcggttggaaattc |
47285811 |
T |
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