View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17649_low_18 (Length: 410)
Name: NF17649_low_18
Description: NF17649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17649_low_18 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 95 - 410
Target Start/End: Original strand, 47285286 - 47285601
Alignment:
| Q |
95 |
gcaaactatgacctacctaaaacttaaacaaaatacattctccatgataattaatttgcaaacatctaatctaacctaatacaatcctcctaacaaatca |
194 |
Q |
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| T |
47285286 |
gcaaactatgacctacctaaaacttaaacaaaatacattctccatgataattaatttgcaaacatctaatctaacctaatacaatcctcctaacaaatca |
47285385 |
T |
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| Q |
195 |
atctaatctaacaaaccaatatctgcaactacattattacatgagttgcacccactcacctgaactaggcacaccagcatgcaccaaaaacaaaaggtaa |
294 |
Q |
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| T |
47285386 |
atctaatctaacaaaccaatatctgcaactacattattacatgagttgcacccactcacctgaactaggcacaccagcatgcaccaaaaacaaaaggtaa |
47285485 |
T |
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| Q |
295 |
taacctggtggtgcaatctcttgagtagatggtccaaccacagtagcataataaatatccaaattcaccattgttacatcaatcaacttcaaaaccacca |
394 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
47285486 |
taacctggtggtgcaatctcttgagtagatggtccaaccacagtagcataataaatatccaaattcaccattgttacaccaatcaacttcaaaaccacca |
47285585 |
T |
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| Q |
395 |
tcctctgattcattcc |
410 |
Q |
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|||||||||||||||| |
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| T |
47285586 |
tcctctgattcattcc |
47285601 |
T |
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