View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17651_high_100 (Length: 268)
Name: NF17651_high_100
Description: NF17651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17651_high_100 |
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Alignment Details
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 17 - 261
Target Start/End: Original strand, 48237118 - 48237362
Alignment:
| Q |
17 |
ttcatttgacaaacttaagagttcattctttcctaccatcacttaatttaaagcatcatgatcaataatgaaacttatttatgatttttataattacttg |
116 |
Q |
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| T |
48237118 |
ttcatttgacaaacttaagagttcattctttcctaccatcacttaatttaaagcatcatgatcaataatgaaacttatttatgatttttataattactta |
48237217 |
T |
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| Q |
117 |
gtattttgtttagtaattgttactagcactttgttcctattgcataattcacatcacctgattttttgctgatattgcttgtttgcaagctgagctgtac |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48237218 |
gtattttgtttagtaattgttactagcactttgttcctattgcataattcacatcacctgattttttgctgatattgcttgtttgcaagctgagctgtac |
48237317 |
T |
|
| Q |
217 |
atgtccatagtttgcttcaattcaagcctcaatcttttcatctca |
261 |
Q |
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| T |
48237318 |
atgtccatagtttgcttcaattcaagcctcaatcttttcatctca |
48237362 |
T |
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