View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17651_high_103 (Length: 264)
Name: NF17651_high_103
Description: NF17651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17651_high_103 |
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Alignment Details
Target: chr8 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 31870411 - 31870666
Alignment:
| Q |
1 |
tcgccaatgaaccatctaaagctccccctttcttcttggccttctctgaaacctcctgaacagagaaattgctgcattccttcaaaacttcatcaagctc |
100 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31870411 |
tcgccaatgaaccatctaaagcttcccctttcttcttggccttctctgaaacctcctgaacagagaaattgctgcattccttcaaaacttcatcaagctc |
31870510 |
T |
|
| Q |
101 |
cttcaccaaatcctcttgtcctttcgacgcaatcgttaatccgtagctaagcaaatccgaattatcctcttctttccgacgatctttccgccggaaagat |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
31870511 |
cttcaccaaatcctcttgtcctttcgacgcaatcgttaatccgtagctaagcaaatccgaattatcctcttctttccgacgacctttccgccggaaagat |
31870610 |
T |
|
| Q |
201 |
aacttactcttttctttttcctcatcgcttgaatcagaatcggaatcattcttctc |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31870611 |
aacttactcttttctttttcctcatcgcttgaatcagaatcggaatcattcttctc |
31870666 |
T |
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