View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17651_high_106 (Length: 260)

Name: NF17651_high_106
Description: NF17651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17651_high_106
NF17651_high_106
[»] chr4 (16 HSPs)
chr4 (22-250)||(13594885-13595112)
chr4 (22-250)||(55461990-55462217)
chr4 (22-250)||(8104658-8104885)
chr4 (22-247)||(30239003-30239227)
chr4 (22-239)||(37367539-37367755)
chr4 (23-239)||(7781102-7781318)
chr4 (22-239)||(27591088-27591304)
chr4 (22-239)||(17457633-17457848)
chr4 (24-250)||(37355552-37355778)
chr4 (24-247)||(41373777-41373999)
chr4 (24-247)||(16406124-16406347)
chr4 (60-242)||(5659758-5659939)
chr4 (60-172)||(30210841-30210953)
chr4 (39-175)||(36754098-36754233)
chr4 (92-211)||(40975903-40976021)
chr4 (92-152)||(52182512-52182572)
[»] chr2 (18 HSPs)
chr2 (19-239)||(21341168-21341387)
chr2 (22-250)||(15853327-15853554)
chr2 (22-250)||(36781400-36781627)
chr2 (22-250)||(42930598-42930824)
chr2 (22-239)||(2020675-2020891)
chr2 (22-247)||(43268637-43268861)
chr2 (24-222)||(16816582-16816779)
chr2 (24-222)||(16855739-16855936)
chr2 (23-213)||(21067181-21067371)
chr2 (24-247)||(2158402-2158624)
chr2 (24-247)||(2164818-2165040)
chr2 (24-247)||(12951589-12951811)
chr2 (22-173)||(29485672-29485822)
chr2 (24-247)||(34840465-34840687)
chr2 (24-247)||(45012774-45012996)
chr2 (22-247)||(13901182-13901401)
chr2 (24-247)||(34834021-34834243)
chr2 (89-181)||(11909264-11909356)
[»] chr1 (24 HSPs)
chr1 (22-250)||(45023312-45023539)
chr1 (22-239)||(28996784-28997000)
chr1 (22-239)||(29002500-29002716)
chr1 (24-222)||(1175373-1175570)
chr1 (24-222)||(26622240-26622437)
chr1 (37-250)||(9869888-9870101)
chr1 (21-222)||(41304775-41304975)
chr1 (24-250)||(43687410-43687636)
chr1 (24-247)||(45016572-45016794)
chr1 (24-247)||(42092687-42092909)
chr1 (37-204)||(1115256-1115423)
chr1 (24-247)||(6239435-6239657)
chr1 (24-250)||(39052524-39052749)
chr1 (24-250)||(39058896-39059121)
chr1 (32-222)||(23761596-23761785)
chr1 (24-247)||(44242135-44242358)
chr1 (32-247)||(4600315-4600530)
chr1 (24-247)||(35085780-35086003)
chr1 (38-204)||(32798516-32798681)
chr1 (38-195)||(31073133-31073290)
chr1 (39-204)||(44917185-44917349)
chr1 (37-204)||(23252137-23252304)
chr1 (19-238)||(11912502-11912719)
chr1 (21-67)||(5444634-5444680)
[»] chr3 (17 HSPs)
chr3 (22-250)||(25894004-25894231)
chr3 (22-222)||(32747146-32747345)
chr3 (23-244)||(6037058-6037279)
chr3 (22-239)||(24179850-24180066)
chr3 (22-244)||(9569744-9569966)
chr3 (24-247)||(27501176-27501398)
chr3 (24-250)||(23069268-23069494)
chr3 (35-222)||(47441615-47441801)
chr3 (24-181)||(4310754-4310910)
chr3 (22-231)||(9576259-9576468)
chr3 (35-242)||(43995853-43996059)
chr3 (18-242)||(10940540-10940763)
chr3 (39-204)||(43932358-43932523)
chr3 (22-180)||(20650357-20650514)
chr3 (89-181)||(2786553-2786645)
chr3 (189-244)||(9576217-9576272)
chr3 (164-204)||(2786531-2786571)
[»] chr7 (29 HSPs)
chr7 (22-250)||(9642133-9642360)
chr7 (22-247)||(21643295-21643518)
chr7 (22-247)||(23613165-23613389)
chr7 (22-237)||(14288497-14288711)
chr7 (22-237)||(14299682-14299896)
chr7 (23-239)||(26602763-26602979)
chr7 (18-222)||(19090568-19090771)
chr7 (28-239)||(15949931-15950141)
chr7 (22-244)||(36876332-36876553)
chr7 (22-239)||(3923324-3923540)
chr7 (22-239)||(8192181-8192396)
chr7 (22-239)||(8184621-8184836)
chr7 (22-180)||(6020140-6020297)
chr7 (24-247)||(1379738-1379960)
chr7 (24-247)||(5049121-5049343)
chr7 (24-247)||(6796229-6796451)
chr7 (32-181)||(15915414-15915562)
chr7 (24-247)||(2447439-2447661)
chr7 (24-247)||(8141669-8141891)
chr7 (18-204)||(37026489-37026675)
chr7 (22-204)||(22853479-22853660)
chr7 (24-247)||(48346308-48346525)
chr7 (24-247)||(48352692-48352909)
chr7 (18-204)||(39433671-39433856)
chr7 (38-204)||(33849903-33850069)
chr7 (24-130)||(1947981-1948087)
chr7 (21-82)||(45434352-45434413)
chr7 (186-239)||(15925094-15925147)
chr7 (92-136)||(7412367-7412411)
[»] chr5 (19 HSPs)
chr5 (23-239)||(5876995-5877211)
chr5 (22-239)||(29413896-29414112)
chr5 (22-239)||(22360740-22360956)
chr5 (22-247)||(40957836-40958060)
chr5 (22-239)||(25893876-25894092)
chr5 (22-239)||(22314606-22314822)
chr5 (22-216)||(42151596-42151789)
chr5 (24-250)||(34356471-34356696)
chr5 (24-250)||(34358262-34358487)
chr5 (24-247)||(2958651-2958873)
chr5 (24-247)||(2967120-2967342)
chr5 (24-247)||(29974750-29974972)
chr5 (24-247)||(29981253-29981475)
chr5 (24-247)||(30021670-30021892)
chr5 (22-205)||(12505040-12505222)
chr5 (25-247)||(4974346-4974568)
chr5 (39-238)||(2439580-2439778)
chr5 (60-219)||(2823072-2823230)
chr5 (92-200)||(30579487-30579594)
[»] scaffold0510 (2 HSPs)
scaffold0510 (22-222)||(1801-2000)
scaffold0510 (21-222)||(8136-8336)
[»] chr8 (14 HSPs)
chr8 (22-239)||(36424958-36425174)
chr8 (22-247)||(36020957-36021181)
chr8 (24-247)||(6463785-6464007)
chr8 (24-247)||(7312138-7312360)
chr8 (24-250)||(16709887-16710113)
chr8 (24-173)||(11357467-11357615)
chr8 (24-247)||(8012529-8012751)
chr8 (24-247)||(36004693-36004915)
chr8 (24-247)||(36076756-36076978)
chr8 (39-203)||(15013184-15013348)
chr8 (38-200)||(45067692-45067854)
chr8 (25-250)||(1238993-1239218)
chr8 (60-205)||(12769713-12769858)
chr8 (120-203)||(15013429-15013512)
[»] chr6 (21 HSPs)
chr6 (23-239)||(4737608-4737823)
chr6 (21-247)||(4187473-4187698)
chr6 (22-247)||(32327702-32327926)
chr6 (20-247)||(7061724-7061950)
chr6 (20-247)||(7068910-7069136)
chr6 (22-250)||(9863978-9864206)
chr6 (31-247)||(34710778-34710993)
chr6 (19-250)||(31128505-31128735)
chr6 (22-205)||(31548684-31548866)
chr6 (24-247)||(1427632-1427854)
chr6 (24-247)||(4019444-4019666)
chr6 (24-247)||(4025870-4026092)
chr6 (24-247)||(4717749-4717971)
chr6 (24-247)||(34649591-34649813)
chr6 (24-247)||(34656042-34656264)
chr6 (60-239)||(4668625-4668803)
chr6 (18-181)||(27670815-27670977)
chr6 (24-247)||(13671034-13671257)
chr6 (64-242)||(1166715-1166892)
chr6 (25-247)||(21261792-21262014)
chr6 (92-181)||(9847338-9847427)
[»] scaffold0513 (1 HSPs)
scaffold0513 (21-222)||(11390-11590)
[»] scaffold0060 (1 HSPs)
scaffold0060 (61-204)||(15975-16118)
[»] scaffold0053 (2 HSPs)
scaffold0053 (24-247)||(50481-50703)
scaffold0053 (35-222)||(71228-71414)
[»] scaffold0043 (1 HSPs)
scaffold0043 (24-247)||(4214-4436)
[»] scaffold0475 (1 HSPs)
scaffold0475 (60-239)||(8608-8786)
[»] scaffold0343 (2 HSPs)
scaffold0343 (88-204)||(3507-3622)
scaffold0343 (41-84)||(3442-3485)
[»] scaffold1487 (1 HSPs)
scaffold1487 (92-211)||(1360-1478)
[»] scaffold0202 (1 HSPs)
scaffold0202 (92-181)||(6945-7034)


Alignment Details
Target: chr4 (Bit Score: 165; Significance: 2e-88; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 22 - 250
Target Start/End: Original strand, 13594885 - 13595112
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||| |||    
T  13594885 aatgaaatggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcgcca 13594984  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||    
T  13594985 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaaatcattcgccatggcgagtgggctcgccttccactcgc 13595083  T
Q  222 cgtagcgagttggtggcgtgtaatctctg 250  Q
    | | |||||||||||||||||||||||||    
T  13595084 cattgcgagttggtggcgtgtaatctctg 13595112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 22 - 250
Target Start/End: Complemental strand, 55462217 - 55461990
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||| |||    
T  55462217 aatgaaatggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcgcca 55462118  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| |||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||| ||||    
T  55462117 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaaatcatttgccatggcgagtgggctcgccttccactcgc 55462019  T
Q  222 cgtagcgagttggtggcgtgtaatctctg 250  Q
    | | |||||||||||||||||||||||||    
T  55462018 cattgcgagttggtggcgtgtaatctctg 55461990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 22 - 250
Target Start/End: Original strand, 8104658 - 8104885
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||| |||    
T  8104658 aatgtaatggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcgcca 8104757  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||    
T  8104758 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaaatcattcgccatggcgagtgggctcgccttccactcgc 8104856  T
Q  222 cgtagcgagttggtggcgtgtaatctctg 250  Q
    | | ||||| |||||||||||||||||||    
T  8104857 cattgcgagctggtggcgtgtaatctctg 8104885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 22 - 247
Target Start/End: Original strand, 30239003 - 30239227
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  30239003 aatgaaatggttgagtgggctatttatagaattccgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 30239102  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| | |||||| |||||||||||||| |   || ||||||||||||||| |||||||||||| ||||    
T  30239103 ttgggtttgtgccacgtcagctgtga-gaggctaaactgccctagctcgcctcgcgagtcattccactcgccatggcgagtttgctcgccttccactcgc 30239201  T
Q  222 cgtagcgagttggtggcgtgtaatct 247  Q
    | | ||||||||||||||||||||||    
T  30239202 cattgcgagttggtggcgtgtaatct 30239227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 37367755 - 37367539
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  37367755 aatgaaatggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 37367656  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| ||||||||||||||||||||||| |   || ||||||||||||||| |||||||||||| ||||    
T  37367655 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtcattccactcgccatggcgagtttgctcgccttccactcgc 37367557  T
Q  222 cgtagcgagttggtggcg 239  Q
    | | ||||||||||||||    
T  37367556 cattgcgagttggtggcg 37367539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 23 - 239
Target Start/End: Original strand, 7781102 - 7781318
Alignment:
Q  23 atgaaatggttgagtgggct-atttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  7781102 atgaaatggttaagtgggcttatttatagaattctgattctgcatcaactcgcctcacgagctccttcattcgccatggcgagttgaggttccttcacca 7781201  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| ||||||||| |||| | |||| ||| |||||||||||||| || |||||| |  |||||||||||||||||| |||||||||||| ||||    
T  7781202 ttgggtttgtgccacgtcatctgtgaagagt-taaaccgccctaactcgcttcacgagtagacacattcgccatggcgagttcgctcgccttccactcgc 7781300  T
Q  222 cgtagcgagttggtggcg 239  Q
    | | ||||||||||||||    
T  7781301 cattgcgagttggtggcg 7781318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 22 - 239
Target Start/End: Original strand, 27591088 - 27591304
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  27591088 aatgaaatggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 27591187  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| ||||||||||||||||||||||| |   || |||||||||||||||  ||||||||||| ||||    
T  27591188 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtcattccactcgccatggcgagttttctcgccttccactcgc 27591286  T
Q  222 cgtagcgagttggtggcg 239  Q
    | | ||||||||||||||    
T  27591287 cattgcgagttggtggcg 27591304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 22 - 239
Target Start/End: Original strand, 17457633 - 17457848
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  17457633 aatgaaatggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 17457732  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| ||||||| ||||||||||||||| |   || ||||||||||||||   ||||||||||| ||||    
T  17457733 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccct-actcgcctcgcgagtcattccactcgccatggcgagtgttctcgccttccactcgc 17457830  T
Q  222 cgtagcgagttggtggcg 239  Q
    | | ||||||||||||||    
T  17457831 cattgcgagttggtggcg 17457848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 24 - 250
Target Start/End: Complemental strand, 37355778 - 37355552
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||| ||||||||||||||||||||| ||| |||| ||| |    
T  37355778 tgaaatggttgagtgggctatttatagaattctgagtctgcattcactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccatt 37355679  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    |||||||||||| ||||||  | || ||  ||| ||||||||||||||||||||||||   ||  ||||||||||||     ||||||||| | |||||     
T  37355678 gggtttgcgccatgtcagcaatgagaagcttaaaccgccctaactcgcctcgcgagtactttccctcgccatggcgaacaaactcgccttctactcgcca 37355579  T
Q  224 tagcgagttggtggcgtgtaatctctg 250  Q
    | |||||||||||||||||||||||||    
T  37355578 ttgcgagttggtggcgtgtaatctctg 37355552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 41373777 - 41373999
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||| ||||||||||| ||| |||| ||| |    
T  41373777 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccgtggcgagttgaagtttcttccccatt 41373876  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  41373877 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 41373975  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  41373976 ttgcgagttggtggcgtgtgatct 41373999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 16406124 - 16406347
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||| ||||||| ||||||||||||||||| | | |||||| |||||||||||||||| | ||||||||||||||||||||| |||||||||||| |    
T  16406124 tgaaatgattgagtgagctatttatagaattctaaatttgcatccactcgcctcgcgagcttcttcattcgccatggcgagttgaagttccttcaccatt 16406223  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| ||||||||| | || || ||  ||| |||||||||||||||||| |||||    || ||||||||||||   | ||||||||  | | |||     
T  16406224 gggtttgtgccacgtcatcagtgagaagcttaaaccgccctaactcgcctcgtgagtacttgcactcgccatggcgaacagactcgccttatacttgcca 16406323  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||||||||    
T  16406324 ttgcgagttggtggcgtgtaatct 16406347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 60 - 242
Target Start/End: Complemental strand, 5659939 - 5659758
Alignment:
Q  60 tctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgtcagctgtaaggagtctaagcc 159  Q
    |||||||||||||||||||||||  || ||||| ||| ||||||||| |||||||||||||||| |||||| |||||||||  | | |||||| |  |||    
T  5659939 tctgcatcaactcgcctcgcgagtaacttcatttgccttggcgagttaaggttccttcaccagtaggtttgtgccacgtcacttttgaggagttttggcc 5659840  T
Q  160 gccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccgtagcgagttggtggcgtgt 242  Q
     |||||||||||||||||||||||  |||| ||||| ||||||| |||||||||||||||||| | ||||||||  |||||||    
T  5659839 accctaactcgcctcgcgagtaaatgcatttgccattgcgagtt-gctcgccttccattcgcctttgcgagttgagggcgtgt 5659758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 30210953 - 30210841
Alignment:
Q  60 tctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgtcagctgtaaggagtctaagcc 159  Q
    ||||| ||||||||||||||||| | | ||||||||||||||||||| | |||||||||||||| |||||| ||||||||| |||| ||||||||| |||    
T  30210953 tctgcttcaactcgcctcgcgagttccttcattcgccatggcgagtttaagttccttcaccagtaggtttgtgccacgtcatctgtgaggagtctaggcc 30210854  T
Q  160 gccctaactcgcc 172  Q
    |||||||||||||    
T  30210853 gccctaactcgcc 30210841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 39 - 175
Target Start/End: Complemental strand, 36754233 - 36754098
Alignment:
Q  39 ggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgt 138  Q
    |||||||||||||||||   |||||| ||||||||||||| |||  || ||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  36754233 ggctatttatagaattcctgttctgcctcaactcgcctcgtgagtaacttcattcgccatggcgagttgaggttacttcaccagtgggtttgtgccacgt 36754134  T
Q  139 cagctgtaaggagtctaagccgccctaactcgcctcg 175  Q
    || || | |||||| | |||||| |||||||||||||    
T  36754133 cacctctgaggagtat-agccgctctaactcgcctcg 36754098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 211
Target Start/End: Complemental strand, 40976021 - 40975903
Alignment:
Q  92 tcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcg 191  Q
    ||||||||| |||||||| || |||  ||||||| |||  |||||||||||| |||||  | || |||||| |||||||||||||||||||  | | |||    
T  40976021 tcgccatggtgagttgagctttctttcccagtggatttctgccacgtcagctttaagggat-taggccgccttaactcgcctcgcgagtaattttactcg 40975923  T
Q  192 ccatggcgagttggctcgcc 211  Q
    ||||||| |||| |||||||    
T  40975922 ccatggcaagttagctcgcc 40975903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 52182572 - 52182512
Alignment:
Q  92 tcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgtcagctgtaaggagt 152  Q
    ||||||||| ||||||| ||| ||||||||||||||||  |||| ||||||| | ||||||    
T  52182572 tcgccatggtgagttgatgtttcttcaccagtgggtttctgccatgtcagctctgaggagt 52182512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 161; Significance: 6e-86; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 21341387 - 21341168
Alignment:
Q  19 cttaatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttca 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||    
T  21341387 cttaatgaaatggttgagtgggctatttatagaattctgattctgcatcaattcgcctcgcgagcttcttcattcgccatggcgagttgaggttccttca 21341288  T
Q  119 ccagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccatt 218  Q
    ||| ||| |||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| | |    
T  21341287 ccattggttttgtgccacgtcagctgtgaggagtctaagtcgccctaactcgcctcgcgagtacaatcattcgccatggcgagttggctcgccttcaact 21341188  T
Q  219 cgccgtagcgagttggtggcg 239  Q
    |||| | ||||||||||||||    
T  21341187 cgccat-gcgagttggtggcg 21341168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 22 - 250
Target Start/End: Original strand, 15853327 - 15853554
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||| ||||||||||||||||||| |||    
T  15853327 aatgaaatggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccagggcgagttgaggttccttcgcca 15853426  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| |||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| ||||    
T  15853427 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaaatcattcaccatggcgagtgggctcgccttccactcgc 15853525  T
Q  222 cgtagcgagttggtggcgtgtaatctctg 250  Q
    | | |||||||||||||||||||||||||    
T  15853526 cattgcgagttggtggcgtgtaatctctg 15853554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 22 - 250
Target Start/End: Complemental strand, 36781627 - 36781400
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||| ||||||||||||||||||| |||    
T  36781627 aatgaaatggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccagggcgagttgaggttccttcgcca 36781528  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | |||  ||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||    
T  36781527 ttgggtttgtgccacgtcagctgtga-gagggtaaaccgccctaactcgcctcgcgagtaaaatcattcgccatggcgagtgggctcgccttccactcgc 36781429  T
Q  222 cgtagcgagttggtggcgtgtaatctctg 250  Q
    | | |||||||||||||||||||||||||    
T  36781428 cattgcgagttggtggcgtgtaatctctg 36781400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 22 - 250
Target Start/End: Complemental strand, 42930824 - 42930598
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||| ||||||||||||||||||| |||    
T  42930824 aatgaaatggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccagggcgagttgaggttccttcgcca 42930725  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||    
T  42930724 ttgggtttgtgccacgtcagctgtga-gaggctaa-ccgccctaactcgcctcgcgagtaaaatcattcgccatggcgagtgggctcgccttccactcgc 42930627  T
Q  222 cgtagcgagttggtggcgtgtaatctctg 250  Q
    | | |||||||||||||||||||||||||    
T  42930626 cattgcgagttggtggcgtgtaatctctg 42930598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 2020891 - 2020675
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||   ||||||| ||||||||||||||||||||||||||    
T  2020891 aatgaaatggttgagtgggctatttatagaattctgattctgcattaacttgcctcgcgagctctttcattcgtcatggcgagttgaggttccttcacca 2020792  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| ||||||||| |||| | |||| ||| |||||||||||||||||||||||| |   ||||||||||||||||| |||||||||||| | ||    
T  2020791 ttgggtttgtgccacgtcatctgtgaagagt-taaaccgccctaactcgcctcgcgagtatacatattcgccatggcgagttcgctcgccttccactagc 2020693  T
Q  222 cgtagcgagttggtggcg 239  Q
    | | ||||||||||||||    
T  2020692 cattgcgagttggtggcg 2020675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 22 - 247
Target Start/End: Original strand, 43268637 - 43268861
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||   ||| |||||||||||||||||||||||||| |||    
T  43268637 aatgaaatggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcaatcgccatggcgagttgaggttccttcgcca 43268736  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||||| ||| |||| ||||| | ||||||||||||||| |   || ||||||||||||||  |||||||||||| ||||    
T  43268737 ttgggtttgtgccacgtcagctgtaa-gaggctaaaccgccttcactcgcctcgcgagtcattccactcgccatggcgagtaagctcgccttccactcgc 43268835  T
Q  222 cgtagcgagttggtggcgtgtaatct 247  Q
    | | ||||||||||||||||| ||||    
T  43268836 cattgcgagttggtggcgtgtgatct 43268861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 24 - 222
Target Start/End: Complemental strand, 16816779 - 16816582
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| | |||||||||||||||||||||||||||||||||| |    
T  16816779 tgaaatggttgagtgggctatttatagaattctgattctgcatgaactcgcctcgtgagctccttcattcgccatggcgagttgaggttccttcaccatt 16816680  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgcc 222  Q
    ||||||| ||||||||| |||| | |||| ||  ||||||||||||||||||| |||| |  |||||||||||||||||  |||||||||||| |||||    
T  16816679 gggtttgtgccacgtcatctgtgaagagt-tagaccgccctaactcgcctcgcaagtacatccattcgccatggcgagtatgctcgccttccactcgcc 16816582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 24 - 222
Target Start/End: Complemental strand, 16855936 - 16855739
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| | |||||||||||||||||||||||||||||||||| |    
T  16855936 tgaaatggttgagtgggctatttatagaattctgattctgcatgaactcgcctcgtgagctccttcattcgccatggcgagttgaggttccttcaccatt 16855837  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgcc 222  Q
    ||||||| ||||||||| |||| | |||| ||  ||||||||||||||||||| |||| |  |||||||||||||||||  |||||||||||| |||||    
T  16855836 gggtttgtgccacgtcatctgtgaagagt-tagaccgccctaactcgcctcgcaagtacatccattcgccatggcgagtatgctcgccttccactcgcc 16855739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 23 - 213
Target Start/End: Complemental strand, 21067371 - 21067181
Alignment:
Q  23 atgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccag 122  Q
    ||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||| | |||||||||||||||||||| |||||||||||||     
T  21067371 atgaaatggttgagtgggctatttataaaattctgactctgtatcaactcgcctcgcgagctccttcattcgccatggcgagttgcggttccttcaccat 21067272  T
Q  123 tgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgcctt 213  Q
    |||||||| |||||||||||||| | |||| ||  ||||| |||||||||||||||| | |  |||||||||||||||||  |||||||||    
T  21067271 tgggtttgtgccacgtcagctgtgaagagtttagaccgccataactcgcctcgcgagcacatccattcgccatggcgagtgtgctcgcctt 21067181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 2158402 - 2158624
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  2158402 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 2158501  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  2158502 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 2158600  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  2158601 ttgcgagttggtggcgtgtgatct 2158624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 2164818 - 2165040
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  2164818 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 2164917  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  2164918 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 2165016  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  2165017 ttgcgagttggtggcgtgtgatct 2165040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 12951589 - 12951811
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||| ||||||||||||| ||| |||| ||| |    
T  12951589 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgtcatggcgagttgaagtttcttccccatt 12951688  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  12951689 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 12951787  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  12951788 ttgcgagttggtggcgtgtgatct 12951811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 22 - 173
Target Start/End: Original strand, 29485672 - 29485822
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  29485672 aatgaaatggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 29485771  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcct 173  Q
     |||||||| |||||||||||||| | ||| |||| | ||||||||||||||    
T  29485772 ttgggtttgtgccacgtcagctgtga-gaggctaaactgccctaactcgcct 29485822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 34840687 - 34840465
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  34840687 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 34840588  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     ||||||||| |||||||  |||||||||| | |||||     
T  34840587 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccacggcgagtaagctcgccttctactcgcca 34840489  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  34840488 ttgcgagttggtggcgtgtgatct 34840465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 45012774 - 45012996
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  45012774 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 45012873  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||| ||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  45012874 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcccctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 45012972  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  45012973 ttgcgagttggtggcgtgtgatct 45012996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 22 - 247
Target Start/End: Complemental strand, 13901401 - 13901182
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||     ||||||||||| |||||| |||||||||||||| ||| |||| |||    
T  13901401 aatgaaatggttgagtgggctatttatagaattctgactctgcatcaac-----tcgcgagctacttcattcaccatggcgagttgaagttacttcccca 13901307  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| ||| | |||| ||||| | ||||||||||||||| |   || ||||||||||||||  |||||||||| | |||     
T  13901306 ttgggtttgtgccacgtcagctgtgagg-ggctaaaccgccttcactcgcctcgcgagtcattccactcgccatggcgagtaagctcgccttctactcgt 13901208  T
Q  222 cgtagcgagttggtggcgtgtaatct 247  Q
    | | ||||||||||||||||| ||||    
T  13901207 cattgcgagttggtggcgtgtgatct 13901182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 34834243 - 34834021
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  34834243 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 34834144  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     ||||||||| |||||||  |||||||||| | |||||     
T  34834143 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccacggcgagtaagctcgccttctactcgcca 34834045  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | || |||||||||||||| ||||    
T  34834044 ttgctagttggtggcgtgtgatct 34834021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 181
Target Start/End: Complemental strand, 11909356 - 11909264
Alignment:
Q  89 cattcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagta 181  Q
    |||||||||||| ||||||  ||| ||||| ||||||||||  |||||||||||| | |||||| | ||||||||||||||||||||||||||    
T  11909356 cattcgccatggtgagttgctgttacttcatcagtgggtttctgccacgtcagctctgaggagttttagccgccctaactcgcctcgcgagta 11909264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 161; Significance: 6e-86; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 22 - 250
Target Start/End: Original strand, 45023312 - 45023539
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||| |||    
T  45023312 aatgaaatggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcgcca 45023411  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||    
T  45023412 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaaatcattcgccatggcgagtgggctcgccttccactcgc 45023510  T
Q  222 cgtagcgagttggtggcgtgtaatctctg 250  Q
    | | ||||| |||||||||||||||||||    
T  45023511 cattgcgagctggtggcgtgtaatctctg 45023539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 22 - 239
Target Start/End: Original strand, 28996784 - 28997000
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  28996784 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctccttcattcgccatggcgagttgaagttccttcacca 28996883  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| ||||||||| |||| | |||| ||| ||||||| |||||||||||||||| |  |||||| |||||||||||||||||||||||| ||||    
T  28996884 ttgggtttgtgccacgtcatctgtgaagagt-taaaccgccctcactcgcctcgcgagtagacacattcgtcatggcgagttggctcgccttccactcgc 28996982  T
Q  222 cgtagcgagttggtggcg 239  Q
    | | ||||||||||||||    
T  28996983 cattgcgagttggtggcg 28997000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 22 - 239
Target Start/End: Original strand, 29002500 - 29002716
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||  ||||||||||||    
T  29002500 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctccttcattcgccatggcgagttggagttccttcacca 29002599  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| ||||||||| |||| | |||| ||| ||||||| |||||||||||||||| |  |||||| |||||||||||||||||||||||| ||||    
T  29002600 ttgggtttgtgccacgtcatctgtgaagagt-taaaccgccctcactcgcctcgcgagtagacacattcgtcatggcgagttggctcgccttccactcgc 29002698  T
Q  222 cgtagcgagttggtggcg 239  Q
    | | ||||||||||||||    
T  29002699 cattgcgagttggtggcg 29002716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 24 - 222
Target Start/End: Original strand, 1175373 - 1175570
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||| |    
T  1175373 tgaaatggttgagtgggctatttatagaattctgattctgcatgaactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccatt 1175472  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgcc 222  Q
    ||||||| ||||||||| |||| | |||| ||  ||||||||||||||||||| |||| |  |||||||||||||||||  |||||||||||| |||||    
T  1175473 gggtttgtgccacgtcatctgtgaagagt-tagaccgccctaactcgcctcgcaagtacatccattcgccatggcgagtatgctcgccttccactcgcc 1175570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 24 - 222
Target Start/End: Original strand, 26622240 - 26622437
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||| |||||||||||||||||||| |    
T  26622240 tgaaatggttgagtgggctatttatagaattctgattctgcatgaactcgcctcgcgagctccttcattcgccatggtgagttgaggttccttcaccatt 26622339  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgcc 222  Q
    ||||||| ||||||||| |||| | |||| ||  |||||||||||| ||||||||||| |  |||||||||||||||||  |||||||||||| |||||    
T  26622340 gggtttgtgccacgtcatctgtgaagagt-tagaccgccctaactcacctcgcgagtacatccattcgccatggcgagtatgctcgccttccactcgcc 26622437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 37 - 250
Target Start/End: Original strand, 9869888 - 9870101
Alignment:
Q  37 tgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccac 136  Q
    ||||||||||||| ||||||  ||||||||| |||||||||||||||| | ||||||||||||||||||||| ||| |||||||| ||| |||| |||||    
T  9869888 tgggctatttataaaattctcgttctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaagtttcttcaccattggttttgtgccac 9869987  T
Q  137 gtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccgtagcgagttggtg 236  Q
    || | || |||||||||||| |||||||||||||||| ||||||| | |||||||||||||||||||   |||||||| | ||||| | |||||||||||    
T  9869988 gtaacctctaaggagtctaaaccgccctaactcgccttgcgagtacattcattcgccatggcgagttcagtcgccttctactcgccattgcgagttggtg 9870087  T
Q  237 gcgtgtaatctctg 250  Q
    |||||| |||||||    
T  9870088 gcgtgtgatctctg 9870101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 41304975 - 41304775
Alignment:
Q  21 taatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacc 120  Q
    |||||||||| |||| ||||||||||||||||||||||||| ||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||    
T  41304975 taatgaaatgcttgactgggctatttatagaattctgattcagcatcaaatcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcacc 41304876  T
Q  121 agtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcg 220  Q
    | |||||||| ||||| ||| |||| | |||| ||| |||||||||||| ||||||||||| |  ||||| |||||||||||  |||||||||||| |||    
T  41304875 attgggtttgtgccacatcatctgtgaagagt-taaaccgccctaactcccctcgcgagtacatccattctccatggcgagtatgctcgccttccactcg 41304777  T
Q  221 cc 222  Q
    ||    
T  41304776 cc 41304775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 24 - 250
Target Start/End: Original strand, 43687410 - 43687636
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||| |||  |||||||||||||||||| ||||||||||||||||||||| ||| |||| ||| |    
T  43687410 tgaaatggttgagtgggctatttatagaattctgaatctacattcactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccatt 43687509  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| ||||||||||| || || ||  ||| ||||||||||||||||||||||||   ||  ||||| ||||||     ||||||||| | |||||     
T  43687510 gggtttgtgccacgtcagcagtgagaagcttaaaccgccctaactcgcctcgcgagtactttccctcgccgtggcgaacaaactcgccttctactcgcca 43687609  T
Q  224 tagcgagttggtggcgtgtaatctctg 250  Q
    | |||||||||||||||||||||||||    
T  43687610 ttgcgagttggtggcgtgtaatctctg 43687636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 45016572 - 45016794
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  45016572 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 45016671  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  45016672 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 45016770  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  45016771 ttgcgagttggtggcgtgtgatct 45016794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 42092687 - 42092909
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||| ||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  42092687 tgaaatggttgagtgggctctttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 42092786  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  42092787 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 42092885  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  42092886 ttgcgagttggtggcgtgtgatct 42092909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 37 - 204
Target Start/End: Complemental strand, 1115423 - 1115256
Alignment:
Q  37 tgggctatttatagaa-ttctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgcca 135  Q
    ||||||||||||| || ||||||| |||| ||||||||||||||||||| | ||||||||||||||||||| | |||||||||| |||||||||| ||||    
T  1115423 tgggctatttatataaattctgat-ctgcttcaactcgcctcgcgagctccttcattcgccatggcgagtttaagttccttcactagtgggtttgtgcca 1115325  T
Q  136 cgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttg 204  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||| |  || ||||||||||||||||    
T  1115324 cgtcatctgtgaggagtctaggccgccctaactcgcctcgcgagtacatgcactcgccatggcgagttg 1115256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 6239435 - 6239657
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | |||||||||| |||||||||| ||| |||| ||| |    
T  6239435 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccaaggcgagttgaagtttcttccccatt 6239534  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     ||||||||| |||||||  |||||||||| | |||||     
T  6239535 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccacggcgagtaagctcgccttctactcgcca 6239633  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  6239634 ttgcgagttggtggcgtgtgatct 6239657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 24 - 250
Target Start/End: Complemental strand, 39052749 - 39052524
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||||||| ||||||||||||||||||||| ||| |||| ||| |    
T  39052749 tgaaatggttgagtgggctatttataggattctgagtctgccttaactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccatt 39052650  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||| | ||||||||||||||| |   || ||||||||||||     ||||||||| | |||||     
T  39052649 gggtttgtgccacgtcagcattga-gaggctaaaccgcctttactcgcctcgcgagtcattccactcgccatggcgaacacactcgccttctactcgcca 39052551  T
Q  224 tagcgagttggtggcgtgtaatctctg 250  Q
      |||||||||||||||||||||||||    
T  39052550 ctgcgagttggtggcgtgtaatctctg 39052524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 24 - 250
Target Start/End: Complemental strand, 39059121 - 39058896
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||||||| ||||||||||||||||||||| ||| |||| ||| |    
T  39059121 tgaaatggttgagtgggctatttataggattctgagtctgccttaactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccatt 39059022  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||| | ||||||||||||||| |   || ||||||||||||     ||||||||| | |||||     
T  39059021 gggtttgtgccacgtcagcattga-gaggctaaaccgcctttactcgcctcgcgagtcattccactcgccatggcgaacacactcgccttctactcgcca 39058923  T
Q  224 tagcgagttggtggcgtgtaatctctg 250  Q
      |||||||||||||||||||||||||    
T  39058922 ctgcgagttggtggcgtgtaatctctg 39058896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 32 - 222
Target Start/End: Complemental strand, 23761785 - 23761596
Alignment:
Q  32 ttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgc 131  Q
    ||||||||||||||||||||||| ||| |||||||| ||||||||||||||||   ||||||||||||||||||||||||| |||||||| ||||||||     
T  23761785 ttgagtgggctatttatagaattttgactctgcatccactcgcctcgcgagctcattcattcgccatggcgagttgaggttacttcaccattgggtttgt 23761686  T
Q  132 gccacgtcagctgtaaggagtctaag-ccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgcc 222  Q
    ||||||||| |  || | ||  |||| ||||||||||||||||||||||||||  |||||||||||| ||||  |||| ||||||| |||||    
T  23761685 gccacgtcaac--tatgaagcttaagaccgccctaactcgcctcgcgagtaaatccattcgccatggtgagtaagctcaccttccactcgcc 23761596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 44242135 - 44242358
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||| ||||||| ||||||||||||||||| | | |||||| |||||||||||||||| | ||||||||||||||||||||| |||||||||||| |    
T  44242135 tgaaatgattgagtgagctatttatagaattctaaatatgcatccactcgcctcgcgagcttcttcattcgccatggcgagttgaagttccttcaccatt 44242234  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| ||||||||| | || || ||  ||| ||||||||||||||||| ||||||    || ||||||||||||   | ||||||||  | |||||     
T  44242235 gggtttgtgccacgtcatcagtgagaagcttaaaccgccctaactcgcctcacgagtacttgcactcgccatggcgaacagactcgccttttactcgcca 44242334  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | |||||||||||||||| |||||    
T  44242335 ttgcgagttggtggcgtgcaatct 44242358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 32 - 247
Target Start/End: Original strand, 4600315 - 4600530
Alignment:
Q  32 ttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgc 131  Q
    ||||||| ||||||||||||||| | | ||| |||| |||||||||||||||||| ||||||||||||||||||||| ||||||||| || ||||||||     
T  4600315 ttgagtgagctatttatagaattataaatctacatccactcgcctcgcgagctacttcattcgccatggcgagttgaagttccttcatcattgggtttgt 4600414  T
Q  132 gccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccgtagcgagt 231  Q
    |||| |||| | || || ||  ||| ||||||||||||||||||||||||    || ||||||||||||   | ||||||||| | ||||| | ||| ||    
T  4600415 gccatgtcatcagtgagaagcttaaaccgccctaactcgcctcgcgagtacttgcactcgccatggcgaacagactcgccttctactcgccattgcgtgt 4600514  T
Q  232 tggtggcgtgtaatct 247  Q
    ||||||||||||||||    
T  4600515 tggtggcgtgtaatct 4600530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 35085780 - 35086003
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||| ||||||| ||||||||||||||||| | |||||||| |||||||||||||||| | ||||||||||||||||||||  |||||||||||| |    
T  35085780 tgaaatgattgagtgagctatttatagaattctaaatctgcatccactcgcctcgcgagctccttcattcgccatggcgagttggagttccttcaccatt 35085879  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    | ||||| ||||||||| | || || ||  ||| || |||||||||||||||||||||    || | ||||||||||     ||||||||| | |||||     
T  35085880 gagtttgtgccacgtcatcagtgagaagcttaaaccaccctaactcgcctcgcgagtacttgcacttgccatggcgaacatactcgccttctactcgcca 35085979  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||| ||||||||||    
T  35085980 ttgcgagttggtgacgtgtaatct 35086003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 204
Target Start/End: Original strand, 32798516 - 32798681
Alignment:
Q  38 gggctatttatagaa-ttctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccac 136  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||| | |||||||| ||||| ||| || |||||||||| | |||||||| |||||    
T  32798516 gggctatttatagaacttctgat-ctgcttcaactcgcctcgcgagctccttcattcgctatggcaagt-gaagttccttcacgattgggtttgtgccac 32798613  T
Q  137 gtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttg 204  Q
    |||| |||| |||||| || ||||||||||||||||||||||||| |  || ||||||||||||||||    
T  32798614 gtcatctgtgaggagtttaggccgccctaactcgcctcgcgagtacatgcactcgccatggcgagttg 32798681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 38 - 195
Target Start/End: Original strand, 31073133 - 31073290
Alignment:
Q  38 gggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccacg 137  Q
    |||||||||||||| |||| | |||||||||||||||||| ||||  ||  |||||||||||||||||||| ||| |||||||| |  ||||| ||||||    
T  31073133 gggctatttatagatttcttaatctgcatcaactcgcctcacgagtaactccattcgccatggcgagttgatgtttcttcaccattaagtttgagccacg 31073232  T
Q  138 tcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccat 195  Q
    ||| |  | |||||| || ||||||||||||||||||||||||||| ||| |||||||    
T  31073233 tcacccttgaggagtttaggccgccctaactcgcctcgcgagtaaattcactcgccat 31073290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 204
Target Start/End: Original strand, 44917185 - 44917349
Alignment:
Q  39 ggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgt 138  Q
    |||||||||||||| | |  |||||| |||||||||||||||||  || |||||| |||||||||||||||||| ||||||||||||| ||| ||||| |    
T  44917185 ggctatttatagaagtattgttctgcctcaactcgcctcgcgagtaacttcattctccatggcgagttgaggttacttcaccagtgggattgtgccacat 44917284  T
Q  139 cagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttg 204  Q
    || || |||||||| | |||||||||||||| ||||||| ||||  ||| ||||||| ||||||||    
T  44917285 cacctctaaggagt-ttagccgccctaactcacctcgcgggtaatatcactcgccattgcgagttg 44917349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 204
Target Start/End: Original strand, 23252137 - 23252304
Alignment:
Q  37 tgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccac 136  Q
    ||||||||||||||||||||  |||||| |||||||| ||||||||  ||  |||||||| ||||||||||| ||| |||||||| |   |||| |||||    
T  23252137 tgggctatttatagaattcttgttctgcctcaactcgtctcgcgagtaacaccattcgccttggcgagttgaagtttcttcaccattaattttgagccac 23252236  T
Q  137 gtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttg 204  Q
    |||| || |||||||| || ||||||||||||||||||||||||||  ||| ||||| | ||||||||    
T  23252237 gtcacctctaaggagtttaggccgccctaactcgcctcgcgagtaatatcactcgcctttgcgagttg 23252304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 238
Target Start/End: Complemental strand, 11912719 - 11912502
Alignment:
Q  19 cttaatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttca 118  Q
    |||||||||||| || | |||||||||| |||| ||||  |||||| |||||||||||||||||  ||  |||||||| ||||||||||| ||| |||||    
T  11912719 cttaatgaaatgattaaatgggctatttctaga-ttcttgttctgcctcaactcgcctcgcgagtaacaccattcgccttggcgagttgaagtttcttca 11912621  T
Q  119 ccagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccatt 218  Q
    ||| |   |||| ||||||||| || | |||||| || ||| |||||||||||||| |||||||  ||| ||||||| ||||||| ||||||||    ||    
T  11912620 ccattaaatttgagccacgtcacctctgaggagtttaggccaccctaactcgcctcacgagtaatttcactcgccattgcgagtt-gctcgcctctggtt 11912522  T
Q  219 cgccgtagcgagttggtggc 238  Q
    |||| | |||||||||||||    
T  11912521 cgcctttgcgagttggtggc 11912502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 5444680 - 5444634
Alignment:
Q  21 taatgaaatggttgagtgggctatttatagaattctgattctgcatc 67  Q
    |||||||||| ||||||| ||||||||||||||||| | ||||||||    
T  5444680 taatgaaatgattgagtgagctatttatagaattctaaatctgcatc 5444634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 22 - 250
Target Start/End: Original strand, 25894004 - 25894231
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||  ||    
T  25894004 aatgaaatggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcttca 25894103  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| ||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| ||||    
T  25894104 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaaagcattcgccatggcgagtgggctcgccttccactcgc 25894202  T
Q  222 cgtagcgagttggtggcgtgtaatctctg 250  Q
    | | |||||||||||||||||||||||||    
T  25894203 cattgcgagttggtggcgtgtaatctctg 25894231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 32747146 - 32747345
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||| |||    
T  32747146 aatgaaatggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcgcca 32747245  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| |||||||||||||||||||||||||| ||||||||||||| ||||  |||||||||||| ||||    
T  32747246 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtaaattcattcgccatggagagtaagctcgccttccactcgc 32747344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 23 - 244
Target Start/End: Original strand, 6037058 - 6037279
Alignment:
Q  23 atgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccag 122  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||     
T  6037058 atgaaatggttgagtgggctatttatagaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccat 6037157  T
Q  123 tgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgcc 222  Q
    |||||||| |||||||||||||| ||| | |||| |||||||| |||||||||||||| |   || || |||||||||||  |||||||||||| |||||    
T  6037158 tgggtttgtgccacgtcagctgtgagggggctaaaccgccctagctcgcctcgcgagtcattccactcaccatggcgagtaagctcgccttccactcgcc 6037257  T
Q  223 gtagcgagttggtggcgtgtaa 244  Q
     | |||||||||||||||||||    
T  6037258 attgcgagttggtggcgtgtaa 6037279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 22 - 239
Target Start/End: Original strand, 24179850 - 24180066
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  24179850 aatgaaatggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 24179949  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| ||||||||||||||||||||||| |   || ||||||||||||||| |||||||||||| | ||    
T  24179950 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtcattccactcgccatggcgagtttgctcgccttccactagc 24180048  T
Q  222 cgtagcgagttggtggcg 239  Q
    | | ||||||||||||||    
T  24180049 cattgcgagttggtggcg 24180066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 22 - 244
Target Start/End: Complemental strand, 9569966 - 9569744
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||| | || |||||||||||||||||| ||| |||| |||    
T  9569966 aatgaaatggttgagtgggctatttatagaattctgattctgtactaactcgcctcgcgagctccttccttcgccatggcgagttgaagtttcttcccca 9569867  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||  |   ||| |||| ||||| | ||||||||||||||| ||  || ||||||||| ||||  |||||||||||| ||||    
T  9569866 ttgggtttgtgccacgtcagcatttgagaggctaaaccgccttcactcgcctcgcgagtcaatccactcgccatggtgagtaagctcgccttccactcgc 9569767  T
Q  222 cgtagcgagttggtggcgtgtaa 244  Q
    | | |||||||||||||||||||    
T  9569766 cattgcgagttggtggcgtgtaa 9569744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 27501398 - 27501176
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  27501398 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcatcattcgccatggcgagttgaagtttcttccccatt 27501299  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  27501298 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 27501200  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  27501199 ttgcgagttggtggcgtgtgatct 27501176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 24 - 250
Target Start/End: Original strand, 23069268 - 23069494
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| |||||||  |||||||| ||||||||| ||||||||||||||||||||| ||| |||| ||| |    
T  23069268 tgaaatggttgagtgggctatttatagaattctgagtctgcattcactcgccttgcgagctacttcattcgccatggcgagttgaagtttcttccccatt 23069367  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    |||||||  ||| ||||||  | || ||  ||| ||||||||||||||||||||||||   ||  |||||||||| |     ||||||||| | |||||     
T  23069368 gggtttgaaccatgtcagcaatgagaagcttaaaccgccctaactcgcctcgcgagtactttccctcgccatggcaaccaaactcgccttctactcgcca 23069467  T
Q  224 tagcgagttggtggcgtgtaatctctg 250  Q
    | |||||||||||||||||||||||||    
T  23069468 ttgcgagttggtggcgtgtaatctctg 23069494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 35 - 222
Target Start/End: Original strand, 47441615 - 47441801
Alignment:
Q  35 agtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgcc 134  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||  || |||||||| |||||||||||||||| |||||||| |||||||| |||    
T  47441615 agtgggctatttatagaattcatgttctgcatcaactcgcctcgcgagtaacttcattcgcaatggcgagttgaggttacttcaccactgggtttgagcc 47441714  T
Q  135 acgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgcc 222  Q
    |||||| || | |||| | || | ||||||||||||||| | |||||||  || ||||||| ||||||| ||||||||||||||||||    
T  47441715 acgtcatctttgaggaatttaggtcgccctaactcgccttgtgagtaaatgcactcgccattgcgagtt-gctcgccttccattcgcc 47441801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 24 - 181
Target Start/End: Complemental strand, 4310910 - 4310754
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| |||||||  ||||||||| |||||||| ||||||||| ||||||||||| ||| |||| ||| |    
T  4310910 tgaaatggttgagtgggctatttatagaattctgagtctgcatgcactcgcctcacgagctacttcattcgcc-tggcgagttgaagtttcttccccatt 4310812  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagta 181  Q
    ||||||| ||||||||||| || || ||  ||| ||||||||||||||||||||||||    
T  4310811 gggtttgtgccacgtcagcagtgagaagcttaaaccgccctaactcgcctcgcgagta 4310754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 9576468 - 9576259
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||| | || || ||||||||||||||| ||| |||| |||    
T  9576468 aatgaaatggttgagtgggctatttatagaattctgattctgtactaactcgcctcgcgagctccttcctttgccatggcgagttgaagtttcttcccca 9576369  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||  |   ||| |||| ||||| | ||||||||||||||| |   || ||||||||||||||  |||||||||||| ||||    
T  9576368 ttgggtttgtgccacgtcagcatttgagaggctaaaccgccttcactcgcctcgcgagtcattccactcgccatggcgagtaagctcgccttccactcgc 9576269  T
Q  222 cgtagcgagt 231  Q
    | | ||||||    
T  9576268 catggcgagt 9576259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 35 - 242
Target Start/End: Original strand, 43995853 - 43996059
Alignment:
Q  35 agtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgcc 134  Q
    |||||||||||||||| ||||   |||||||| |||||||||||||||  || ||| |||| |||||||||||||||| ||||||||||||||||| |||    
T  43995853 agtgggctatttataggattcatgttctgcattaactcgcctcgcgagtaacttcactcgcaatggcgagttgaggttacttcaccagtgggtttgagcc 43995952  T
Q  135 acgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccgtagcgagttgg 234  Q
    |||||| || | |||||| ||  ||||||||||||||||||||||||||  || || |||  ||||||| |||||||||| ||||||| | ||||||||     
T  43995953 acgtcacctttgaggagtttagaccgccctaactcgcctcgcgagtaaatgcactcaccagtgcgagtt-gctcgccttcaattcgcctttgcgagttga 43996051  T
Q  235 tggcgtgt 242  Q
     |||||||    
T  43996052 gggcgtgt 43996059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 242
Target Start/End: Complemental strand, 10940763 - 10940540
Alignment:
Q  18 ccttaatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctc-attcgccatggcgagttgaggttcctt 116  Q
    |||||||| |||| || | ||||||||||||||||||||   ||||||||||||||||||||||| || ||| ||||||||||||||||||| ||| |||    
T  10940763 ccttaatgtaatgattaaatgggctatttatagaattcttgatctgcatcaactcgcctcgcgag-taactctattcgccatggcgagttgatgtttctt 10940665  T
Q  117 caccagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttcca 216  Q
    ||||| |  ||||| ||||||||  || | |||||| || |||||||||||||||||| ||| |||| ||| ||||||| ||||||| ||||||||| ||    
T  10940664 caccattaagtttgagccacgtcgcctttgaggagtttaggccgccctaactcgcctcacgattaaattcactcgccattgcgagtt-gctcgcctttca 10940566  T
Q  217 ttcgccgtagcgagttggtggcgtgt 242  Q
     ||||||| | ||||||  |||||||    
T  10940565 ctcgccgttgtgagttgagggcgtgt 10940540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 204
Target Start/End: Original strand, 43932358 - 43932523
Alignment:
Q  39 ggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgt 138  Q
    ||||||||||||||||||   |||||||||||||||||||||||  ||  |||||||||||||||||||| ||| |||||||| |  ||||| |||||||    
T  43932358 ggctatttatagaattcttgatctgcatcaactcgcctcgcgagtaactccattcgccatggcgagttgatgtttcttcaccattaagtttgagccacgt 43932457  T
Q  139 cagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttg 204  Q
    || || |||||||| || |||||||||||||||||| |||||||  ||| ||||||| ||||||||    
T  43932458 cacctctaaggagtttaggccgccctaactcgcctcacgagtaatttcactcgccattgcgagttg 43932523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 20650514 - 20650357
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    ||||||||| |  |||||||| ||||||||| | |  ||||||||||||||||||||||||   | |||||||||||| |||||||||||| |||||| |    
T  20650514 aatgaaatgatcaagtgggct-tttatagaaattttgttctgcatcaactcgcctcgcgagtagcttcattcgccatgccgagttgaggttacttcacta 20650416  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagt 180  Q
    ||||||||| | ||||||| || | |||||  | |||||||||||||||||||||||||    
T  20650415 gtgggtttgtgacacgtcacctctgaggagatttagccgccctaactcgcctcgcgagt 20650357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 2786553 - 2786645
Alignment:
Q  89 cattcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagta 181  Q
    |||||||||||||||||||| ||| ||||||||||||||||  |||||||||||| | |||||| | ||||||||||||||||||||| ||||    
T  2786553 cattcgccatggcgagttgatgtttcttcaccagtgggtttctgccacgtcagctttgaggagttttagccgccctaactcgcctcgcaagta 2786645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 9576272 - 9576217
Alignment:
Q  189 tcgccatggcgagttggctcgccttccattcgccgtagcgagttggtggcgtgtaa 244  Q
    ||||||||||||||  |||||||||||| ||||| | |||||||||||||||||||    
T  9576272 tcgccatggcgagtaagctcgccttccactcgccattgcgagttggtggcgtgtaa 9576217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 2786531 - 2786571
Alignment:
Q  164 taactcgcctcgcgagtaaagtcattcgccatggcgagttg 204  Q
    ||||||||||||| ||||||  |||||||||||||||||||    
T  2786531 taactcgcctcgcaagtaaatgcattcgccatggcgagttg 2786571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 4e-81; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 22 - 250
Target Start/End: Complemental strand, 9642360 - 9642133
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||| ||||||||||||||||||| |||    
T  9642360 aatgaaatggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccagggcgagttgaggttccttcgcca 9642261  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| |||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||||||| ||||    
T  9642260 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgtgagtaaaatcattcgccatgacgagtgggctcgccttccactcgc 9642162  T
Q  222 cgtagcgagttggtggcgtgtaatctctg 250  Q
    | | |||||||||||||||||||||||||    
T  9642161 cattgcgagttggtggcgtgtaatctctg 9642133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 22 - 247
Target Start/End: Original strand, 21643295 - 21643518
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  21643295 aatgaaatggttgagtgggctatttatagaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 21643394  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| |||||||| ||||||||||||| |||  || ||||||||||||||  |||||||||||| | ||    
T  21643395 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccctagctcgcctcgcgag-aaatgcactcgccatggcgagtaagctcgccttccactagc 21643492  T
Q  222 cgtagcgagttggtggcgtgtaatct 247  Q
    | | ||||||||||||||||||||||    
T  21643493 cattgcgagttggtggcgtgtaatct 21643518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 22 - 247
Target Start/End: Original strand, 23613165 - 23613389
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  23613165 aatgaaatggttgagtgggctatttatagaattccgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 23613264  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| || ||||| |||||||||||||| |   || ||||||||||||||| |||||||||||| ||||    
T  23613265 ttgggtttgtgccacgtcagctgtga-gaggctaaacctccctagctcgcctcgcgagtcattccactcgccatggcgagtttgctcgccttccactcgc 23613363  T
Q  222 cgtagcgagttggtggcgtgtaatct 247  Q
    | |  |||||||||||||||||||||    
T  23613364 catttcgagttggtggcgtgtaatct 23613389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 22 - 237
Target Start/End: Original strand, 14288497 - 14288711
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  14288497 aatgaaatggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 14288596  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| ||||||||||||||||||||||| |   || |||||||||||||||  ||||||||||| ||||    
T  14288597 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtcattccactcgccatggcgagttttctcgccttccactcgc 14288695  T
Q  222 cgtagcgagttggtgg 237  Q
    | | ||||||||||||    
T  14288696 cattgcgagttggtgg 14288711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 22 - 237
Target Start/End: Original strand, 14299682 - 14299896
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  14299682 aatgaaatggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 14299781  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| ||||||||||||||||||||||| |   || |||||||||||||||  ||||||||||| ||||    
T  14299782 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtcattccactcgccatggcgagttttctcgccttccactcgc 14299880  T
Q  222 cgtagcgagttggtgg 237  Q
    | | ||||||||||||    
T  14299881 cattgcgagttggtgg 14299896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 23 - 239
Target Start/End: Original strand, 26602763 - 26602979
Alignment:
Q  23 atgaaatggttgagtgggct-atttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | | ||||||||||| ||||||||||||||||||||    
T  26602763 atgaaatggttgagtgggcttatttatagaattctgattctgcatcaactcgcctcgcgagctccttaattcgccatggtgagttgaggttccttcacca 26602862  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| ||||||||| |||| | |||| ||| |||||||||||| |||||||| || |  |||||||||||||||||| |||||||||||| ||||    
T  26602863 ttgggtttgtgccacgtcatctgtgaagagt-taaaccgccctaactcccctcgcgaatagacacattcgccatggcgagttcgctcgccttccactcgc 26602961  T
Q  222 cgtagcgagttggtggcg 239  Q
    | | || |||||||||||    
T  26602962 cattgcaagttggtggcg 26602979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 19090568 - 19090771
Alignment:
Q  18 ccttaatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  19090568 ccttaatgaaatggttgagtgggctatttatagaattctgattctgcatgaactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttc 19090667  T
Q  118 accagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccat 217  Q
    |||| |||||||| ||||||||| |||| | |||| ||  | ||||||||||||||||| |||| |  || ||||||||||||||  ||||||||||||     
T  19090668 accattgggtttgtgccacgtcatctgtgaagagt-tagactgccctaactcgcctcgcaagtacatccactcgccatggcgagtatgctcgccttccac 19090766  T
Q  218 tcgcc 222  Q
    |||||    
T  19090767 tcgcc 19090771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 28 - 239
Target Start/End: Original strand, 15949931 - 15950141
Alignment:
Q  28 atggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggt 127  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||    
T  15949931 atggttgagtgggctatttatagaattctgactctacatcaactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggt 15950030  T
Q  128 ttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccgtagc 227  Q
    ||| ||||| ||| || | | |||| ||| |||||||||||||||||||||||| |  |||||||||||||||||| ||| ||||| || ||||| | ||    
T  15950031 ttgtgccacatcatctatgaagagt-taaaccgccctaactcgcctcgcgagtagacacattcgccatggcgagttcgcttgcctttcactcgccattgc 15950129  T
Q  228 gagttggtggcg 239  Q
    ||||||||||||    
T  15950130 gagttggtggcg 15950141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 22 - 244
Target Start/End: Original strand, 36876332 - 36876553
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  36876332 aatgaaatggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 36876431  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | | | |||| |||||||| ||||||||||| || |   || ||||||||||||||  |||||||| ||| ||||    
T  36876432 ttgggtttgtgccacgtcagctgtga-gcggctaaaccgccctagctcgcctcgcgggtcattccactcgccatggcgagtaagctcgcctgccactcgc 36876530  T
Q  222 cgtagcgagttggtggcgtgtaa 244  Q
    | | |||||||||||||||||||    
T  36876531 cattgcgagttggtggcgtgtaa 36876553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 3923540 - 3923324
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||| |||||||||| |||    
T  3923540 aatgaactcgttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttaaggttccttcgcca 3923441  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| ||||||||||| || | ||| |||| | || || |||||||||||||||| |  |||||||||||||||||| | |||||||||| ||||    
T  3923440 ttgggtttgtgccacgtcagcggtga-gaggctaaactgctcttactcgcctcgcgagtagacacattcgccatggcgagtttgttcgccttccactcgc 3923342  T
Q  222 cgtagcgagttggtggcg 239  Q
    | | ||||||||||||||    
T  3923341 cattgcgagttggtggcg 3923324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 8192396 - 8192181
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  8192396 aatgaaatggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 8192297  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| ||||||| ||||||||||||||| |   || ||||||||||||||   ||||||||||| ||||    
T  8192296 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccct-actcgcctcgcgagtcattccactcgccatggcgagtgttctcgccttccactcgc 8192199  T
Q  222 cgtagcgagttggtggcg 239  Q
    | | ||||||||||||||    
T  8192198 cattgcgagttggtggcg 8192181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 8184836 - 8184621
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  8184836 aatgaaatggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 8184737  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| ||||||| ||||||||||||||| |   || |||||||||| |||   ||||||||||| ||||    
T  8184736 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccct-actcgcctcgcgagtcattccactcgccatggctagtgttctcgccttccactcgc 8184639  T
Q  222 cgtagcgagttggtggcg 239  Q
    | | ||||||||||||||    
T  8184638 cattgcgagttggtggcg 8184621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 6020297 - 6020140
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  6020297 aatgaaatggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 6020198  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagt 180  Q
     |||||||| |||||||||| ||| | ||| |||| |||||||||||||||||||||||    
T  6020197 ttgggtttgtgccacgtcagatgtga-gaggctaaaccgccctaactcgcctcgcgagt 6020140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 1379738 - 1379960
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  1379738 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 1379837  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  1379838 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 1379936  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  1379937 ttgcgagttggtggcgtgtgatct 1379960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 5049343 - 5049121
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  5049343 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 5049244  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  5049243 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 5049145  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  5049144 ttgcgagttggtggcgtgtgatct 5049121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 6796229 - 6796451
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  6796229 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 6796328  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  6796329 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 6796427  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  6796428 ttgcgagttggtggcgtgtgatct 6796451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 15915414 - 15915562
Alignment:
Q  32 ttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgc 131  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||| ||||||||     
T  15915414 ttgagtgggctatttatagaattctgactctgcatcaactcgcctcgcaagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgt 15915513  T
Q  132 gccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagta 181  Q
    |||| |||| |||| | |||| ||| ||||||||||||||||||||||||    
T  15915514 gccatgtcatctgtgaagagt-taaaccgccctaactcgcctcgcgagta 15915562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 2447439 - 2447661
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  2447439 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 2447538  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | | |||     
T  2447539 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactagcca 2447637  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  2447638 ttgcgagttggtggcgtgtgatct 2447661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 8141891 - 8141669
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||| ||||||||||||||||| ||| |||| ||| |    
T  8141891 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcaatcgccatggcgagttgaagtttcttccccatt 8141792  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  8141791 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 8141693  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  8141692 ttgcgagttggtggcgtgtgatct 8141669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 37026489 - 37026675
Alignment:
Q  18 ccttaatgaaatggttgagtgggctatttatagaa-ttctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttcctt 116  Q
    ||||||||||||| |||| || ||||||||||||| |||| |||||| |||||||||||||||||||| | |||||||||| |||||||  || ||||||    
T  37026489 ccttaatgaaatgattgaatgagctatttatagaaattctaattctgtatcaactcgcctcgcgagctccttcattcgccagggcgagtgcag-ttcctt 37026587  T
Q  117 caccagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttg 204  Q
    ||||| |||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| | ||  ||||||||||||||||    
T  37026588 caccattgggtttgtgccacgtcagctgtgagaagcctaagccgccctaactcgcctcgcgagtacattccctcgccatggcgagttg 37026675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 204
Target Start/End: Complemental strand, 22853660 - 22853479
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    ||||||||| |||| || |||||||||| |||| | ||||||||||||||||||||||||||| | |||||||||| ||||||| || ||||||||||||    
T  22853660 aatgaaatgattgaatgagctatttataaaattttaattctgcatcaactcgcctcgcgagctccttcattcgccagggcgagt-gaagttccttcacca 22853562  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttg 204  Q
     |||||||| |||||||||||||| || || ||||||||||||||||||||||||||||| | ||  ||||||||| ||||||    
T  22853561 ttgggtttgtgccacgtcagctgtgagaagcctaagccgccctaactcgcctcgcgagtacattccctcgccatggtgagttg 22853479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 48346525 - 48346308
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  48346525 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 48346426  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | || || |||| ||||||| |||||||||||||||     | ||||||| |||||||  |||||||||| | |||||     
T  48346425 gggtttgtgccacgtcagcatttag-aggctaaaccgcccttactcgcctcgcgagt-----ccttcgccacggcgagtaagctcgccttctactcgcca 48346332  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  48346331 ttgcgagttggtggcgtgtgatct 48346308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 48352909 - 48352692
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  48352909 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 48352810  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | || || |||| ||||||| |||||||||||||||     | ||||||| |||||||  |||||||||| | |||||     
T  48352809 gggtttgtgccacgtcagcatttag-aggctaaaccgcccttactcgcctcgcgagt-----ccttcgccacggcgagtaagctcgccttctactcgcca 48352716  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  48352715 ttgcgagttggtggcgtgtgatct 48352692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 39433671 - 39433856
Alignment:
Q  18 ccttaatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttc 117  Q
    ||||||||||||| |||| || ||||| |||||| |||| |||||| |||||||||||||||||||| | |||||||||| |||||||  || |||||||    
T  39433671 ccttaatgaaatgattgaatgagctatatatagacttctaattctgtatcaactcgcctcgcgagctccttcattcgccaaggcgagtaaag-ttccttc 39433769  T
Q  118 accagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttg 204  Q
    |||| | |||||| |||||||||||||| || || ||||||||||||||||||||||||||||| | ||  | ||||||||||||||    
T  39433770 accattaggtttgtgccacgtcagctgtgagaagcctaagccgccctaactcgcctcgcgagtacattccctagccatggcgagttg 39433856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 38 - 204
Target Start/End: Complemental strand, 33850069 - 33849903
Alignment:
Q  38 gggctatttatagaa-ttctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccac 136  Q
    |||||||||||| || ||||||| |||  ||| ||||||||||||||| | |||||| |||||||||||| | ||||||||||||||||||||| |||||    
T  33850069 gggctatttatataaattctgat-ctgattcacctcgcctcgcgagctccttcattctccatggcgagtttaagttccttcaccagtgggtttgtgccac 33849971  T
Q  137 gtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttg 204  Q
    ||||  ||| ||||||||| ||||||||||||||||||||||||| |  || ||||||||||||||||    
T  33849970 gtcatttgtgaggagtctaggccgccctaactcgcctcgcgagtacatgcactcgccatggcgagttg 33849903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 130
Target Start/End: Complemental strand, 1948087 - 1947981
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    |||||||||||||||| |||||||||| ||||||||||||||| ||||| ||||| ||||| | |||||||||||||||||||||||||||||||||| |    
T  1948087 tgaaatggttgagtggtctatttatagtattctgattctgcatgaactcacctcgtgagctccttcattcgccatggcgagttgaggttccttcaccatt 1947988  T
Q  124 gggtttg 130  Q
    |||||||    
T  1947987 gggtttg 1947981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 45434352 - 45434413
Alignment:
Q  21 taatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgag 82  Q
    |||||||||| || |  ||||||||||||||||||| | ||||||| |||||||||||||||    
T  45434352 taatgaaatgattaaaagggctatttatagaattcttaatctgcataaactcgcctcgcgag 45434413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 15925094 - 15925147
Alignment:
Q  186 cattcgccatggcgagttggctcgccttccattcgccgtagcgagttggtggcg 239  Q
    |||||||||||||||||| ||||||||| || ||||| | ||| ||||||||||    
T  15925094 cattcgccatggcgagttcgctcgcctttcactcgccattgcgtgttggtggcg 15925147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 136
Target Start/End: Complemental strand, 7412411 - 7412367
Alignment:
Q  92 tcgccatggcgagttgaggttccttcaccagtgggtttgcgccac 136  Q
    ||||||||| ||||||| ||| |||||||||||||||| ||||||    
T  7412411 tcgccatggagagttgatgtttcttcaccagtgggtttccgccac 7412367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 3e-72; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 23 - 239
Target Start/End: Original strand, 5876995 - 5877211
Alignment:
Q  23 atgaaatggttgagtgggct-atttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  5876995 atgaaatggttgagtgggcttatttatagaattctgattctgcatcaactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcacca 5877094  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||| |||| |||| | |||| ||| |||||||||||||||||||||||| |  |||||||||||||||||| |||||||||||| ||||    
T  5877095 ttgggtttgtgccatgtcatctgtgaagagt-taaaccgccctaactcgcctcgcgagtagacacattcgccatggcgagttcgctcgccttccactcgc 5877193  T
Q  222 cgtagcgagttggtggcg 239  Q
    | | ||||||||||||||    
T  5877194 cattgcgagttggtggcg 5877211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 29414112 - 29413896
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  29414112 aatgaaatggttgagtgggctatttatagaattctgattctgcatccactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcacca 29414013  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| ||||||||| |||| | |||| ||| ||||||| |||||||||||||||| |  | |||||||||||||||| |||||||||||| ||||    
T  29414012 ttgggtttgtgccacgtcatctgtgaagagt-taaaccgccctcactcgcctcgcgagtagacacgttcgccatggcgagtttgctcgccttccactcgc 29413914  T
Q  222 cgtagcgagttggtggcg 239  Q
    | | ||||||||||||||    
T  29413913 cattgcgagttggtggcg 29413896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 22 - 239
Target Start/End: Original strand, 22360740 - 22360956
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  22360740 aatgaaatggttgagtgagctatttatagaattctgattctgtatcaactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcacca 22360839  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||  ||| | |||| ||| |||||||||||||||||||||||| |  ||||||||||||||||||  ||||||||||| ||||    
T  22360840 ttgggtttgtgccacgtcatatgtgaagagt-taaaccgccctaactcgcctcgcgagtagacacattcgccatggcgagttctctcgccttccactcgc 22360938  T
Q  222 cgtagcgagttggtggcg 239  Q
    | | ||||||||||||||    
T  22360939 cattgcgagttggtggcg 22360956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 22 - 247
Target Start/End: Complemental strand, 40958060 - 40957836
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  40958060 aatgaaatggttgagtgggctatttatagaattttgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 40957961  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| |||||||| |||||||||||||| |   || ||||||||||||||| |||||||||||| ||||    
T  40957960 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccctagctcgcctcgcgagtcattccactcgccatggcgagtttgctcgccttccactcgc 40957862  T
Q  222 cgtagcgagttggtggcgtgtaatct 247  Q
    | | | ||||||||||||||||||||    
T  40957861 cattgtgagttggtggcgtgtaatct 40957836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 25894092 - 25893876
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  25894092 aatgaaatggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 25893993  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| ||||||||||||||||||||||| |   || |||||||||||||||  ||||||||||| ||||    
T  25893992 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtcattccactcgccatggcgagttttctcgccttccactcgc 25893894  T
Q  222 cgtagcgagttggtggcg 239  Q
    | | ||||||||||||||    
T  25893893 cattgcgagttggtggcg 25893876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 22 - 239
Target Start/End: Original strand, 22314606 - 22314822
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  22314606 aatgaaatggttgagtgggctatttatagaattctgattttgtatcaactcacctcgcgagctccttcattcgccatggcgagttgaggttccttcacca 22314705  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||| |||| |||| | |||| ||| |||||||||||||||||||||||| |  |||| |||||||||||||  ||||||||||| ||||    
T  22314706 ttgggtttgtgccaagtcatctgtgaagagt-taaaccgccctaactcgcctcgcgagtacacacatttgccatggcgagttctctcgccttccactcgc 22314804  T
Q  222 cgtagcgagttggtggcg 239  Q
    | |  |||||||||||||    
T  22314805 cattacgagttggtggcg 22314822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 22 - 216
Target Start/End: Original strand, 42151596 - 42151789
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||| | ||| ||||||||||||||||||||||||||||||    
T  42151596 aatgaaatggttgagtggactatttatagaattctgattctgtatccactcgcctcgcgagctccttcagtcgccatggcgagttgaggttccttcacca 42151695  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttcca 216  Q
     |||||||| ||||||||| |||| | |||| ||| ||||||| |||||||||||||||| |  ||||| |||||||||||  ||||||||||||    
T  42151696 ttgggtttgtgccacgtcatctgtgaagagt-taaaccgccctcactcgcctcgcgagtacatccattcaccatggcgagtatgctcgccttcca 42151789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 24 - 250
Target Start/End: Complemental strand, 34356696 - 34356471
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||||||| ||||||||||||||||||||| ||| |||| ||| |    
T  34356696 tgaaatggttgagtgggctatttataggattctgagtctgccttaactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccatt 34356597  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||| | ||||||||||||||| |   || ||||||||||||     ||||||||| | ||||||    
T  34356596 gggtttgtgccacgtcagcattga-gaggctaaaccgcctttactcgcctcgcgagtcattccactcgccatggcgaacacactcgccttctactcgccg 34356498  T
Q  224 tagcgagttggtggcgtgtaatctctg 250  Q
    | |||||||||||||||||||||||||    
T  34356497 ttgcgagttggtggcgtgtaatctctg 34356471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 24 - 250
Target Start/End: Complemental strand, 34358487 - 34358262
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||| ||||| ||||||||||||||||||||| ||| |||| ||| |    
T  34358487 tgaaatggttgagtgggctatttataggattctgagtctgccttaactcgcctcgcgggctacttcattcgccatggcgagttgaagtttcttccccatt 34358388  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||| | ||||||||||||||| |   || ||||||||||||     ||||||||| | ||||||    
T  34358387 gggtttgtgccacgtcagcattga-gaggctaaaccgcctttactcgcctcgcgagtcattccactcgccatggcgaacacactcgccttctactcgccg 34358289  T
Q  224 tagcgagttggtggcgtgtaatctctg 250  Q
    | |||||||||||||||||||||||||    
T  34358288 ttgcgagttggtggcgtgtaatctctg 34358262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 2958651 - 2958873
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | |||||||||| |||||||||| ||| |||| ||| |    
T  2958651 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccaaggcgagttgaagtttcttccccatt 2958750  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     ||||||||| |||||||  |||||||||| | |||||     
T  2958751 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccacggcgagtaagctcgccttctactcgcca 2958849  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  2958850 ttgcgagttggtggcgtgtgatct 2958873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 2967120 - 2967342
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | |||||||||| |||||||||| ||| |||| ||| |    
T  2967120 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccaaggcgagttgaagtttcttccccatt 2967219  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     ||||||||| |||||||  |||||||||| | |||||     
T  2967220 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccacggcgagtaagctcgccttctactcgcca 2967318  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  2967319 ttgcgagttggtggcgtgtgatct 2967342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 29974750 - 29974972
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | |||||||||| |||||||||| ||| |||| ||| |    
T  29974750 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccaaggcgagttgaagtttcttccccatt 29974849  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     ||||||||| |||||||  |||||||||| | |||||     
T  29974850 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccacggcgagtaagctcgccttctactcgcca 29974948  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  29974949 ttgcgagttggtggcgtgtgatct 29974972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 29981253 - 29981475
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | |||||||||| |||||||||| ||| |||| ||| |    
T  29981253 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccaaggcgagttgaagtttcttccccatt 29981352  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     ||||||||| |||||||  |||||||||| | |||||     
T  29981353 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccacggcgagtaagctcgccttctactcgcca 29981451  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  29981452 ttgcgagttggtggcgtgtgatct 29981475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 30021892 - 30021670
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | |||||||||| |||||||||| ||| |||| ||| |    
T  30021892 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccaaggcgagttgaagtttcttccccatt 30021793  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     ||||||||| |||||||  |||||||||| | |||||     
T  30021792 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccacggcgagtaagctcgccttctactcgcca 30021694  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  30021693 ttgcgagttggtggcgtgtgatct 30021670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 205
Target Start/End: Complemental strand, 12505222 - 12505040
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    ||||||||| |  |||||||||||||||||||||  ||| | |||||||||||||||||||  || |||||||| ||||||||| |||||| ||||||||    
T  12505222 aatgaaatgatcaagtgggctatttatagaattcccattattcatcaactcgcctcgcgagtaacttcattcgcaatggcgagt-gaggttacttcacca 12505124  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttgg 205  Q
    ||||||||| ||||| ||| || | |||||| || |||||||||||||||||||||||||||  |||||||||| |||||||||    
T  12505123 gtgggtttgagccacatcacctttgaggagtttaggccgccctaactcgcctcgcgagtaaatgcattcgccattgcgagttgg 12505040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 25 - 247
Target Start/End: Original strand, 4974346 - 4974568
Alignment:
Q  25 gaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtg 124  Q
    |||||| |||| ||||||||||||| |||||| | |||| ||| |||||||||||||||| | |||||||||||||| |||||| ||||||| |||| ||    
T  4974346 gaaatgattgaatgggctatttataaaattctaaatctgtatccactcgcctcgcgagctccttcattcgccatggcaagttgaagttcctttaccattg 4974445  T
Q  125 ggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccgt 224  Q
    |||||| ||||||||| | || || ||  ||| ||||||||||||||||||||||||   || |||||||||| ||     ||||||||| | ||||| |    
T  4974446 ggtttgtgccacgtcatcagtgagaagcttaaaccgccctaactcgcctcgcgagtactttccttcgccatggtgaacaaactcgccttctactcgccat 4974545  T
Q  225 agcgagttggtggcgtgtaatct 247  Q
     ||||||||||||||||| ||||    
T  4974546 tgcgagttggtggcgtgtgatct 4974568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 39 - 238
Target Start/End: Original strand, 2439580 - 2439778
Alignment:
Q  39 ggctatttatagaattc-tgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccacg 137  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||  ||  |||||||||||| ||||||| ||| |||||||| |  ||||| ||||||    
T  2439580 ggctatttatagaattcctgatt-tgcatcaactcgcctcgcgagtaactccattcgccatggtgagttgatgtttcttcaccattaagtttgagccacg 2439678  T
Q  138 tcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccgtagcgagttggtgg 237  Q
    ||| || | |||||| || | |||||||||| |||||||||||||  ||| ||||||| ||||||| ||||||||    |||||| | ||||||||||||    
T  2439679 tcacctctgaggagtttagggcgccctaacttgcctcgcgagtaatttcactcgccattgcgagtt-gctcgcctctggttcgcctttgcgagttggtgg 2439777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 60 - 219
Target Start/End: Original strand, 2823072 - 2823230
Alignment:
Q  60 tctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgtcagctgtaaggagtctaagcc 159  Q
    |||||||||||||| || ||||   || |||||||||||||||||||||| || |||||||||||| | || | ||||||| || | |||||| | ||||    
T  2823072 tctgcatcaactcgtcttgcgaataacttcattcgccatggcgagttgagatttcttcaccagtggatctgtgacacgtcacctctgaggagttttagcc 2823171  T
Q  160 gccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattc 219  Q
    |||||||||||||| | |||||||  || ||||||| ||||||| ||||||||| |||||    
T  2823172 gccctaactcgccttgtgagtaaatccactcgccattgcgagtt-gctcgccttacattc 2823230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 30579594 - 30579487
Alignment:
Q  92 tcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcg 191  Q
    ||||||||||||||||| ||| ||||||||||||||||  |||||||||||| | |||||| |  |||||| |||||||||||||||||| | | |||||    
T  30579594 tcgccatggcgagttgatgtttcttcaccagtgggtttctgccacgtcagctctgaggagttttggccgccttaactcgcctcgcgagtata-ttattcg 30579496  T
Q  192 ccatggcga 200  Q
    |||||||||    
T  30579495 ccatggcga 30579487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 129; Significance: 7e-67; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 22 - 222
Target Start/End: Original strand, 1801 - 2000
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  1801 aatgaaatggttgagtgggctatttatagaattctgactctgcataaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 1900  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| ||||| |||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||    
T  1901 ttgggtttgtgccacgtcagctgtta-gagactaaaccgccttaactcgcctcgcgagtaaattcattcgccatggcgagtaagctcgccttccactcgc 1999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 8336 - 8136
Alignment:
Q  21 taatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacc 120  Q
    |||||||||| |||| ||||||||||||||||||||||||| ||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||    
T  8336 taatgaaatgcttgactgggctatttatagaattctgattcagcatcaaatcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcacc 8237  T
Q  121 agtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcg 220  Q
    | |||||||| ||||| ||| |||| | |||| ||| |||||||||||| ||||||||||| |  ||||| |||||||||||  |||||||||||| |||    
T  8236 attgggtttgtgccacatcatctgtgaagagt-taaaccgccctaactcccctcgcgagtacatccattctccatggcgagtatgctcgccttccactcg 8138  T
Q  221 cc 222  Q
    ||    
T  8137 cc 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 5e-65; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 36425174 - 36424958
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  36425174 aatgaaatggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 36425075  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||| | ||| |||| ||||||||||||||||||||||| |   || |||||||||||||||  ||||||||||| ||||    
T  36425074 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtcattccactcgccatggcgagttttctcgccttccactcgc 36424976  T
Q  222 cgtagcgagttggtggcg 239  Q
    | | ||||||||||||||    
T  36424975 cattgcgagttggtggcg 36424958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 22 - 247
Target Start/End: Complemental strand, 36021181 - 36020957
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||   ||||| |||||||||||||||||||||||| |||    
T  36021181 aatgaaatggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcatttgccatggcgagttgaggttccttcgcca 36021082  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||||| ||| |||| ||||| | ||||||||||||||| |   || ||||||||||||||  |||||||||||| ||||    
T  36021081 ttgggtttgtgccacgtcagctgtaa-gaggctaaaccgccttcactcgcctcgcgagtcattccactcgccatggcgagtaagctcgccttccactcgc 36020983  T
Q  222 cgtagcgagttggtggcgtgtaatct 247  Q
    | | ||||||||||||||||| ||||    
T  36020982 cattgcgagttggtggcgtgtgatct 36020957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 6464007 - 6463785
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  6464007 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 6463908  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  6463907 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 6463809  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  6463808 ttgcgagttggtggcgtgtgatct 6463785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 7312138 - 7312360
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  7312138 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 7312237  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  7312238 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 7312336  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  7312337 ttgcgagttggtggcgtgtgatct 7312360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 24 - 250
Target Start/End: Complemental strand, 16710113 - 16709887
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| | |||||  |||||||||||||||||| ||||||||||||||||||||| ||| |||| ||| |    
T  16710113 tgaaatggttgagtgggctatttatagaattctgagtatgcattcactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccccatt 16710014  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | || ||  ||| ||||||||||||||||||||||||   ||  |||||| |||||     ||||||||| | |||||     
T  16710013 gggtttgtgccacgtcagcaatgagaagcttaaaccgccctaactcgcctcgcgagtactttccctcgccacggcgaacaaactcgccttctactcgcca 16709914  T
Q  224 tagcgagttggtggcgtgtaatctctg 250  Q
    | |||||||||||||||||||||||||    
T  16709913 ttgcgagttggtggcgtgtaatctctg 16709887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 24 - 173
Target Start/End: Complemental strand, 11357615 - 11357467
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||| ||||||||||||||||||| |||||||  |||||||||||||||||| |||||||||||||||||||||||||||||| ||| |    
T  11357615 tgaaatggttgagtgagctatttatagaattctgagtctgcattcactcgcctcgcgagctacttcattcgccatggcgagttgaggttccttcgccatt 11357516  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcct 173  Q
    ||||||| |||||||||||||| | ||| |||| ||||||||||||||||    
T  11357515 gggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcct 11357467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 8012751 - 8012529
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||| ||||||||||||||| ||| |||| ||| |    
T  8012751 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcatttgccatggcgagttgaagtttcttccccatt 8012652  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  8012651 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 8012553  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  8012552 ttgcgagttggtggcgtgtgatct 8012529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 36004915 - 36004693
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  36004915 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 36004816  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | ||| |     
T  36004815 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgtca 36004717  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  36004716 ttgcgagttggtggcgtgtgatct 36004693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 36076756 - 36076978
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | |||||| |||||||||||||| ||| ||||  || |    
T  36076756 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcaccatggcgagttgaagtttcttcctcatt 36076855  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  36076856 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 36076954  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  36076955 ttgcgagttggtggcgtgtgatct 36076978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 203
Target Start/End: Original strand, 15013184 - 15013348
Alignment:
Q  39 ggctatttatagaa-ttctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccacg 137  Q
    ||||||||||| || ||||||| |||| ||||||||||||||||||| | ||||||||||||||||||| |  |||||||||||||||||||| ||||||    
T  15013184 ggctatttatataaattctgat-ctgcttcaactcgcctcgcgagctccttcattcgccatggcgagtttaaattccttcaccagtgggtttgtgccacg 15013282  T
Q  138 tcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagtt 203  Q
    ||| |||| |||||||||  ||||||||||||||||||| |||| |  || |||||||||| ||||    
T  15013283 tcatctgtgaggagtctagaccgccctaactcgcctcgcaagtacatgcactcgccatggcaagtt 15013348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 38 - 200
Target Start/End: Complemental strand, 45067854 - 45067692
Alignment:
Q  38 gggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccacg 137  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||  ||  |||||||||||||||||||| ||| |||||||| |  ||||| ||||||    
T  45067854 gggctatttatagaattcttaatctacatcaactcgcctcgcgagtaactccattcgccatggcgagttgatgtttcttcaccattaagtttgagccacg 45067755  T
Q  138 tcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcga 200  Q
    ||| |  | || ||| || ||||||||||||||||||||||||||| ||| ||||||||||||    
T  45067754 tcacccttgagaagtttaggccgccctaactcgcctcgcgagtaaattcactcgccatggcga 45067692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 25 - 250
Target Start/End: Original strand, 1238993 - 1239218
Alignment:
Q  25 gaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtg 124  Q
    |||||| |||| ||||||||||||||| |||| | ||||  || |||||||||||||||| | ||||||||||||||||||||| |||||||||||| ||    
T  1238993 gaaatgattgaatgggctatttatagagttctaaatctgtgtctactcgcctcgcgagcttcttcattcgccatggcgagttgaagttccttcaccattg 1239092  T
Q  125 ggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccgt 224  Q
    |||||| ||||||||| | || |  ||  ||| ||||| ||||||||||||||||||   ||| ||||||||||||     ||||||||| | || || |    
T  1239093 ggtttgtgccacgtcatcagtgaaaagcttaaaccgccttaactcgcctcgcgagtactttcactcgccatggcgaacatactcgccttctactcaccat 1239192  T
Q  225 agcgagttggtggcgtgtaatctctg 250  Q
     |||||||||||||| || |||||||    
T  1239193 tgcgagttggtggcgcgtgatctctg 1239218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 60 - 205
Target Start/End: Original strand, 12769713 - 12769858
Alignment:
Q  60 tctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgtcagctgtaaggagtctaagcc 159  Q
    |||||||| |||| ||||||||||| | ||||||||||||||||||||| |||||||||||| |||||||| ||||||||| |||| ||  | |||| ||    
T  12769713 tctgcatccactcacctcgcgagctccttcattcgccatggcgagttgaagttccttcaccattgggtttgtgccacgtcatctgtgagaggcctaaacc 12769812  T
Q  160 gccctaactcgcctcgcgagtaaagtcattcgccatggcgagttgg 205  Q
     |||||||||||||||||||||   ||| ||||||| |||||||||    
T  12769813 accctaactcgcctcgcgagtactttcactcgccattgcgagttgg 12769858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 203
Target Start/End: Original strand, 15013429 - 15013512
Alignment:
Q  120 cagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagtt 203  Q
    ||||||||||| ||||||||| |||| |||||||||  ||||||||||||||||||| |||| |  || |||||||||| ||||    
T  15013429 cagtgggtttgtgccacgtcatctgtgaggagtctagaccgccctaactcgcctcgcaagtacatgcactcgccatggcaagtt 15013512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 23 - 239
Target Start/End: Complemental strand, 4737823 - 4737608
Alignment:
Q  23 atgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccag 122  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||     
T  4737823 atgaaatggttgagtgggctatttatataattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccat 4737724  T
Q  123 tgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgcc 222  Q
    |||||||| |||||||||||||| | ||| |||| ||||||||||||||||||||||| |   || ||||||||||||||| |||||||||||| | |||    
T  4737723 tgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtcattccactcgccatggcgagtttgctcgccttccactagcc 4737625  T
Q  223 gtagcgagttggtggcg 239  Q
     | ||||||||||||||    
T  4737624 attgcgagttggtggcg 4737608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 21 - 247
Target Start/End: Original strand, 4187473 - 4187698
Alignment:
Q  21 taatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacc 120  Q
    |||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||| | |||||| |||||||||||||| |||||||| ||    
T  4187473 taatgaaatggttgagtgggctatttatagaattctgattctgtcctaactcgcctcgcgagctccttcattcaccatggcgagttgaagttccttcgcc 4187572  T
Q  121 agtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcg 220  Q
    | |||||||| |||||||||||||| | ||| |||| ||||||||||||||||||||||| |   || ||||||||||||||  |||||||||||| |||    
T  4187573 attgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtcattccactcgccatggcgagtaagctcgccttccactcg 4187671  T
Q  221 ccgtagcgagttggtggcgtgtaatct 247  Q
    || | ||||||||||||||||||||||    
T  4187672 ccattgcgagttggtggcgtgtaatct 4187698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 22 - 247
Target Start/End: Complemental strand, 32327926 - 32327702
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||    
T  32327926 aatgaaatggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgcca 32327827  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| |||||||||||||||| ||| |||| ||||| | ||||||||||||||| |    | ||||||||||||||  |||||||||||| ||||    
T  32327826 ttgggtttgtgccacgtcagctgtaa-gaggctaaaccgccttcactcgcctcgcgagtcattctactcgccatggcgagtaagctcgccttccactcgc 32327728  T
Q  222 cgtagcgagttggtggcgtgtaatct 247  Q
    | | ||||||||||||||||| ||||    
T  32327727 cattgcgagttggtggcgtgtgatct 32327702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 247
Target Start/End: Complemental strand, 7061950 - 7061724
Alignment:
Q  20 ttaatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcac 119  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||| |    
T  7061950 ttaatgaaatgattgagtgggctatttatagaattctgactctgcatcaactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccc 7061851  T
Q  120 cagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattc 219  Q
    || |||||||| |||||||||||||| | ||| |||| ||||| | |||||||||||||||     || ||||||||||||||  |||||||||||| ||    
T  7061850 cattgggtttgtgccacgtcagctgtga-gaggctaaaccgccttcactcgcctcgcgagtccttccactcgccatggcgagtaagctcgccttccactc 7061752  T
Q  220 gccgtagcgagttggtggcgtgtaatct 247  Q
    ||| | ||||||||||||||||| ||||    
T  7061751 gccattgcgagttggtggcgtgtgatct 7061724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 247
Target Start/End: Complemental strand, 7069136 - 7068910
Alignment:
Q  20 ttaatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcac 119  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||| |    
T  7069136 ttaatgaaatgattgagtgggctatttatagaattctgactctgcatcaactcgcctcgcgagctacttcattcgccatggcgagttgaagtttcttccc 7069037  T
Q  120 cagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattc 219  Q
    || |||||||| |||||||||||||| | ||| |||| ||||| | |||||||||||||||     || ||||||||||||||  |||||||||||| ||    
T  7069036 cattgggtttgtgccacgtcagctgtga-gaggctaaaccgccttcactcgcctcgcgagtccttccactcgccatggcgagtaagctcgccttccactc 7068938  T
Q  220 gccgtagcgagttggtggcgtgtaatct 247  Q
    ||| | ||||||||||||||||| ||||    
T  7068937 gccattgcgagttggtggcgtgtgatct 7068910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 22 - 250
Target Start/End: Complemental strand, 9864206 - 9863978
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||| ||| |||| |||    
T  9864206 aatgaaatggttgagtgggctatttatagaattctgattctgcatctactcgcctcgcgagctccttcattcgccatggcgagttgaagtttcttcccca 9864107  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgc 221  Q
     |||||||| ||||||||||| || || ||  ||| ||||||||||||||||||||||||   ||  ||||||||||||     ||||||||| | ||||    
T  9864106 ttgggtttgtgccacgtcagcagtgagaagcttaaaccgccctaactcgcctcgcgagtactttccctcgccatggcgaacaaactcgccttctactcgc 9864007  T
Q  222 cgtagcgagttggtggcgtgtaatctctg 250  Q
    | | |||||||||||||||||||||||||    
T  9864006 cattgcgagttggtggcgtgtaatctctg 9863978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 31 - 247
Target Start/End: Complemental strand, 34710993 - 34710778
Alignment:
Q  31 gttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttg 130  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| ||| ||||||||    
T  34710993 gttgagtgggctatttatagaattctgactctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttg 34710894  T
Q  131 cgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccgtagcgag 230  Q
     |||||||||||||| | ||| |||| ||||| | ||||||||||||||| |   || ||||||||||||||  |||||||||||| ||||| | || ||    
T  34710893 tgccacgtcagctgtga-gaggctaaaccgccttcactcgcctcgcgagtcattccactcgccatggcgagtaagctcgccttccactcgccattgcaag 34710795  T
Q  231 ttggtggcgtgtaatct 247  Q
    |||||||||||| ||||    
T  34710794 ttggtggcgtgtgatct 34710778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 19 - 250
Target Start/End: Complemental strand, 31128735 - 31128505
Alignment:
Q  19 cttaatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttca 118  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||| ||| ||||     
T  31128735 cttaatgaaatggttgagtgggctatttatagaattctgactctgcatcaactcgcctcgcgagctacttccttcgccatggcgagttgaagtttcttcc 31128636  T
Q  119 ccagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccatt 218  Q
    ||| |||||||| |||||||||||  | | ||| |||| ||||| | ||||||||||||||| |   || ||||||||||||   | ||||||||  | |    
T  31128635 ccattgggtttgtgccacgtcagcattga-gaggctaaaccgcctttactcgcctcgcgagtcattccactcgccatggcgaacagactcgccttttact 31128537  T
Q  219 cgccgtagcgagttggtggcgtgtaatctctg 250  Q
    |||| |  ||||||||||||||||||||||||    
T  31128536 cgccattccgagttggtggcgtgtaatctctg 31128505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 22 - 205
Target Start/End: Original strand, 31548684 - 31548866
Alignment:
Q  22 aatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacca 121  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||   |||||||||||||||||||||||||||||| |||    
T  31548684 aatgaaatggttgagtgggctatttatacaattctgactctgcatcaactcgcctcgcgggctcattcattcgccatggcgagttgaggttccttcgcca 31548783  T
Q  122 gtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttgg 205  Q
     |||||||| |||||||||||||| | ||| |||| ||||||||||||||||||||||| |   || ||||||| |||||||||    
T  31548784 ttgggtttgtgccacgtcagctgtga-gaggctaaaccgccctaactcgcctcgcgagtcattccactcgccattgcgagttgg 31548866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 1427854 - 1427632
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  1427854 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 1427755  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  1427754 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 1427656  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  1427655 ttgcgagttggtggcgtgtgatct 1427632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 4019666 - 4019444
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  4019666 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 4019567  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  4019566 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 4019468  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  4019467 ttgcgagttggtggcgtgtgatct 4019444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 4026092 - 4025870
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  4026092 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 4025993  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  4025992 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 4025894  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  4025893 ttgcgagttggtggcgtgtgatct 4025870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 4717971 - 4717749
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  4717971 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 4717872  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  4717871 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 4717773  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  4717772 ttgcgagttggtggcgtgtgatct 4717749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 34649591 - 34649813
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||| ||||||| ||| |||| ||| |    
T  34649591 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggtgagttgaagtttcttccccatt 34649690  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  34649691 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 34649789  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  34649790 ttgcgagttggtggcgtgtgatct 34649813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 34656042 - 34656264
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||  ||| |    
T  34656042 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttctttcccatt 34656141  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  34656142 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 34656240  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  34656241 ttgcgagttggtggcgtgtgatct 34656264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 60 - 239
Target Start/End: Complemental strand, 4668803 - 4668625
Alignment:
Q  60 tctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgtcagctgtaaggagtctaagcc 159  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||| | ||| |||| ||    
T  4668803 tctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtga-gaggctaaacc 4668705  T
Q  160 gccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccgtagcgagttggtggcg 239  Q
    |||||||||||||| |||||| |   || ||||||||||||||| |||||||||||| | ||| | ||||||||||||||    
T  4668704 gccctaactcgccttgcgagtcattccactcgccatggcgagtttgctcgccttccactagccattgcgagttggtggcg 4668625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 27670815 - 27670977
Alignment:
Q  18 ccttaatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttc 117  Q
    ||||||||||||| |||| || ||||||||||||||||| |||||||||||| ||| |||||||||| | |||||||||| |||||| ||| ||||||||    
T  27670815 ccttaatgaaatgattgaatgagctatttatagaattctaattctgcatcaaatcgtctcgcgagctccttcattcgccagggcgag-tgaagttccttc 27670913  T
Q  118 accagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagta 181  Q
    |||| |||||||| ||||||||||| || || || |||||||||||||||||||||||||||||    
T  27670914 accattgggtttgtgccacgtcagccgtgagaagcctaagccgccctaactcgcctcgcgagta 27670977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 13671257 - 13671034
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||| ||||||| ||||||||||||||||| | |||||||| ||||||||| |||||| | ||||||| ||||||||||||| |||||||||||| |    
T  13671257 tgaaatgattgagtgagctatttatagaattctaaatctgcatccactcgcctcccgagctccttcattcgtcatggcgagttgaagttccttcaccatt 13671158  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| ||||||||| |  | || ||  ||| ||||||||||||||||||||||||    || ||||||||||||     ||| ||||| | |||||     
T  13671157 gggtttgtgccacgtcatcactgagaagcttaaaccgccctaactcgcctcgcgagtacttgcactcgccatggcgaacaaactcaccttctactcgcca 13671058  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | |||||||||||| |||||||||    
T  13671057 ttgcgagttggtggtgtgtaatct 13671034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 64 - 242
Target Start/End: Complemental strand, 1166892 - 1166715
Alignment:
Q  64 catcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgtcagctgtaaggagtctaagccgccc 163  Q
    |||||||||||||||||||   | |||||| || ||||||||||||||| ||||||||||||||||| | ||||||| || | |||||| | ||||||||    
T  1166892 catcaactcgcctcgcgagtagcttcattcaccttggcgagttgaggtttcttcaccagtgggtttgtgacacgtcacctctgaggagttttagccgccc 1166793  T
Q  164 taactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccgtagcgagttggtggcgtgt 242  Q
    ||||||||||||||||||||  || || |||| ||||||| |||||||||||||||||| | ||||||||  |||||||    
T  1166792 taactcgcctcgcgagtaaatgcactcaccattgcgagtt-gctcgccttccattcgcctttgcgagttgagggcgtgt 1166715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 247
Target Start/End: Complemental strand, 21262014 - 21261792
Alignment:
Q  25 gaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtg 124  Q
    |||||| |||| ||||||||||||||| |||| | |||| ||| || ||||||||||||| | ||||||||||||||||  ||| |||||||||||| ||    
T  21262014 gaaatgattgaatgggctatttatagatttctaaatctgtatccacccgcctcgcgagctccttcattcgccatggcgaaatgaagttccttcaccattg 21261915  T
Q  125 ggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccgt 224  Q
    |||||  ||||||||| | || || ||| ||| ||||||||||||||||||||||||    || ||||||||||||     ||||||||| | ||||| |    
T  21261914 ggtttatgccacgtcatcagtgagaagtttaaaccgccctaactcgcctcgcgagtacttccactcgccatggcgaacatactcgccttctactcgccat 21261815  T
Q  225 agcgagttggtggcgtgtaatct 247  Q
     | ||||||||||||||||||||    
T  21261814 tgtgagttggtggcgtgtaatct 21261792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 9847338 - 9847427
Alignment:
Q  92 tcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagta 181  Q
    |||||||| |||||||| ||| ||||| ||||||||||  ||||||| |||| | || ||| | ||||||| || |||||||||||||||    
T  9847338 tcgccatgacgagttgatgtttcttcatcagtgggtttctgccacgttagctttgagaagttttagccgccttagctcgcctcgcgagta 9847427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 21 - 222
Target Start/End: Complemental strand, 11590 - 11390
Alignment:
Q  21 taatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcacc 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | || | |||||||||||||||||||| ||||||||||||    
T  11590 taatgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcacaaactccttcattcgccatggcgagttgtggttccttcacc 11491  T
Q  121 agtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcg 220  Q
    |||||||||  |||||||||  ||| | |||| ||| ||||||||||| |||| ||||||| |  ||||||||||||||| |  |||||||||||| |||    
T  11490 agtgggtttatgccacgtcatatgtgaagagt-taaaccgccctaacttgccttgcgagtacatccattcgccatggcgactatgctcgccttccactcg 11392  T
Q  221 cc 222  Q
    ||    
T  11391 cc 11390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 61 - 204
Target Start/End: Original strand, 15975 - 16118
Alignment:
Q  61 ctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgtcagctgtaaggagtctaagccg 160  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  15975 ctgcttcaactcgcctcgcgagctccttcattcgccatggcgagttgaagttccttcaccagtgggtttgtgccacgtcatctgtaaggagtctaggccg 16074  T
Q  161 ccctaactcgcctcgcgagtaaagtcattcgccatggcgagttg 204  Q
    ||||||||||||||||||||| |  || ||||||||||||||||    
T  16075 ccctaactcgcctcgcgagtacatgcactcgccatggcgagttg 16118  T

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Target: scaffold0053 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 50481 - 50703
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  50481 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 50580  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  50581 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 50679  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  50680 ttgcgagttggtggcgtgtgatct 50703  T

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Target: scaffold0053; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 35 - 222
Target Start/End: Original strand, 71228 - 71414
Alignment:
Q  35 agtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgcc 134  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||| |||    
T  71228 agtgggctatttatagaattctgattctgcatgcactcgcctcgcgagctccttcattcgccatggcgagttgaggttccttcaccattgggtttgtgcc 71327  T
Q  135 acgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgcc 222  Q
    |||||| |||| | |||| ||   ||| ||||||||||||||||||| |  |||| ||||||| ||||  |||||||||||| |||||    
T  71328 acgtcatctgtgaagagt-tagatcgcgctaactcgcctcgcgagtacatccatttgccatggtgagtatgctcgccttccactcgcc 71414  T

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Target: scaffold0043 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 247
Target Start/End: Complemental strand, 4436 - 4214
Alignment:
Q  24 tgaaatggttgagtgggctatttatagaattctgattctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagt 123  Q
    ||||||||||||||||||||||||||||||||||| ||||| |  |||||||||||||||| | ||||||||||||||||||||| ||| |||| ||| |    
T  4436 tgaaatggttgagtgggctatttatagaattctgagtctgccttcactcgcctcgcgagctgcttcattcgccatggcgagttgaagtttcttccccatt 4337  T
Q  124 gggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccg 223  Q
    ||||||| |||||||||||  | | ||| |||| ||||||| |||||||||||||||     |||||||||||||||||  |||||||||| | |||||     
T  4336 gggtttgtgccacgtcagcattta-gaggctaaaccgcccttactcgcctcgcgagtccttccattcgccatggcgagtaagctcgccttctactcgcca 4238  T
Q  224 tagcgagttggtggcgtgtaatct 247  Q
    | ||||||||||||||||| ||||    
T  4237 ttgcgagttggtggcgtgtgatct 4214  T

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Target: scaffold0475 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 60 - 239
Target Start/End: Original strand, 8608 - 8786
Alignment:
Q  60 tctgcatcaactcgcctcgcgagctacctcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgtcagctgtaaggagtctaagcc 159  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||| | ||| |||| ||    
T  8608 tctgcatcaactcgcctcgcgagctcattcattcgccatggcgagttgaggttccttcgccattgggtttgtgccacgtcagctgtga-gaggctaaacc 8706  T
Q  160 gccctaactcgcctcgcgagtaaagtcattcgccatggcgagttggctcgccttccattcgccgtagcgagttggtggcg 239  Q
    |||||||||||||| |||||| |   || ||||||||||||||| |||||||||||| | ||| | ||||||||||||||    
T  8707 gccctaactcgccttgcgagtcattccactcgccatggcgagtttgctcgccttccactagccattgcgagttggtggcg 8786  T

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Target: scaffold0343 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 88 - 204
Target Start/End: Original strand, 3507 - 3622
Alignment:
Q  88 tcattcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtca 187  Q
    |||||||||| ||||||| || |||||||||||| |||||||| |||||||||||||| || || ||||||||||||||||||||||||| ||| | ||     
T  3507 tcattcgccagggcgagt-gaagttccttcaccattgggtttgtgccacgtcagctgtgagaagcctaagccgccctaactcgcctcgcgggtacattcc 3605  T
Q  188 ttcgccatggcgagttg 204  Q
     ||||||||| ||||||    
T  3606 ctcgccatggtgagttg 3622  T

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Target: scaffold0343; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 3442 - 3485
Alignment:
Q  41 ctatttatagaattctgattctgcatcaactcgcctcgcgagct 84  Q
    |||||||||||||||| |||||  ||||||||||||||||||||    
T  3442 ctatttatagaattctaattctatatcaactcgcctcgcgagct 3485  T

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Target: scaffold1487 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1487
Description:

Target: scaffold1487; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 211
Target Start/End: Complemental strand, 1478 - 1360
Alignment:
Q  92 tcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagtaaagtcattcg 191  Q
    |||||||||||||||||| || ||| ||||||||||||  |||||||||| | | ||| |  || |||||| |||||||||||||||||||  |   |||    
T  1478 tcgccatggcgagttgagctttctttaccagtgggtttctgccacgtcagatttgagg-gattaggccgccttaactcgcctcgcgagtaattttgctcg 1380  T
Q  192 ccatggcgagttggctcgcc 211  Q
    ||||||| |||| |||||||    
T  1379 ccatggctagttagctcgcc 1360  T

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Target: scaffold0202 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 6945 - 7034
Alignment:
Q  92 tcgccatggcgagttgaggttccttcaccagtgggtttgcgccacgtcagctgtaaggagtctaagccgccctaactcgcctcgcgagta 181  Q
    ||||||||||||||||| ||| |||||||||||| |||   ||||||| ||| | | |||| |  |||||| || |||||||||||||||    
T  6945 tcgccatggcgagttgatgtttcttcaccagtggatttcttccacgtcggctatgaagagttttggccgccttagctcgcctcgcgagta 7034  T

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