View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17651_high_108 (Length: 258)
Name: NF17651_high_108
Description: NF17651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17651_high_108 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 17 - 240
Target Start/End: Original strand, 45458329 - 45458552
Alignment:
| Q |
17 |
taaatcaattttattcacttcagttccagtaaatatttatttactccatttatattcacttcatttacaatactttccaggtggtatttttgctttatac |
116 |
Q |
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| T |
45458329 |
taaatcaattttattcacttcagtttcagtaaatatttatttactccatttatattcacttcattgaaaatattttccaggtggtatttttgctttatac |
45458428 |
T |
|
| Q |
117 |
tcactgttgtgtagaaatgcaaaagttggcctactcccttgtgatagaaccactgatgaggtcgtgctttttgaggagacaacaactccttcttctaaga |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45458429 |
tcactgttgtgtagaaatgcaaaagttggcctactcccttgtgatagaaccactgatgaggtcgtgctttttgaggagacaacaactccttcttctaaga |
45458528 |
T |
|
| Q |
217 |
ttaatactgattccaaagcacgaa |
240 |
Q |
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|||||||||||||||||||||||| |
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| T |
45458529 |
ttaatactgattccaaagcacgaa |
45458552 |
T |
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