View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17651_high_143 (Length: 209)

Name: NF17651_high_143
Description: NF17651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17651_high_143
NF17651_high_143
[»] chr3 (18 HSPs)
chr3 (1-209)||(53643584-53643792)
chr3 (1-71)||(53642919-53642989)
chr3 (19-71)||(36719354-36719406)
chr3 (80-146)||(53644340-53644405)
chr3 (19-71)||(4014657-4014709)
chr3 (19-71)||(4331664-4331716)
chr3 (19-71)||(6144190-6144242)
chr3 (19-71)||(10492252-10492304)
chr3 (19-71)||(40798822-40798874)
chr3 (19-71)||(42148885-42148937)
chr3 (19-71)||(51755367-51755419)
chr3 (19-71)||(52514913-52514965)
chr3 (20-71)||(47443593-47443644)
chr3 (19-71)||(22935535-22935588)
chr3 (19-71)||(4014958-4015010)
chr3 (19-71)||(34542939-34542991)
chr3 (19-71)||(40877669-40877721)
chr3 (19-71)||(55176244-55176296)
[»] chr7 (19 HSPs)
chr7 (78-209)||(22112617-22112748)
chr7 (78-209)||(40493703-40493834)
chr7 (80-146)||(40493094-40493160)
chr7 (104-146)||(22113291-22113333)
chr7 (80-189)||(43902766-43902875)
chr7 (80-144)||(43903349-43903413)
chr7 (76-143)||(10350626-10350693)
chr7 (19-71)||(7953632-7953684)
chr7 (19-71)||(25195403-25195455)
chr7 (19-71)||(28564431-28564483)
chr7 (19-71)||(29097722-29097774)
chr7 (19-71)||(30471401-30471453)
chr7 (19-71)||(31512463-31512515)
chr7 (19-71)||(35839534-35839586)
chr7 (19-71)||(5026699-5026751)
chr7 (19-71)||(26833330-26833382)
chr7 (19-71)||(27657189-27657241)
chr7 (19-71)||(29112971-29113023)
chr7 (19-71)||(32606935-32606987)
[»] chr4 (18 HSPs)
chr4 (80-146)||(5490566-5490632)
chr4 (19-71)||(11566684-11566736)
chr4 (19-71)||(16472692-16472744)
chr4 (19-71)||(16473539-16473591)
chr4 (19-71)||(21343231-21343283)
chr4 (19-71)||(28235395-28235447)
chr4 (19-71)||(51037265-51037317)
chr4 (73-141)||(54628417-54628485)
chr4 (19-71)||(56565946-56565998)
chr4 (19-71)||(56566514-56566566)
chr4 (19-71)||(28157744-28157795)
chr4 (19-71)||(28234608-28234660)
chr4 (19-71)||(28320666-28320718)
chr4 (19-71)||(29307315-29307367)
chr4 (19-71)||(36479955-36480007)
chr4 (19-71)||(37295396-37295448)
chr4 (19-71)||(45971652-45971704)
chr4 (19-71)||(50447216-50447268)
[»] chr8 (19 HSPs)
chr8 (19-71)||(10749521-10749573)
chr8 (19-71)||(23512624-23512676)
chr8 (19-71)||(2334951-2335003)
chr8 (19-71)||(2712567-2712619)
chr8 (19-71)||(4528292-4528344)
chr8 (19-71)||(30026118-30026170)
chr8 (19-71)||(34798692-34798744)
chr8 (19-71)||(44934071-44934123)
chr8 (19-69)||(3695964-3696014)
chr8 (19-71)||(4394886-4394938)
chr8 (19-71)||(23512210-23512262)
chr8 (19-71)||(34502994-34503046)
chr8 (19-71)||(36314054-36314106)
chr8 (19-71)||(38133335-38133387)
chr8 (19-71)||(41859062-41859114)
chr8 (19-71)||(43263141-43263193)
chr8 (19-71)||(45252455-45252507)
chr8 (19-71)||(45410041-45410093)
chr8 (19-71)||(45410806-45410858)
[»] chr6 (10 HSPs)
chr6 (19-71)||(3177683-3177735)
chr6 (74-141)||(9880566-9880633)
chr6 (19-69)||(117399-117449)
chr6 (19-71)||(6760681-6760733)
chr6 (19-71)||(15545895-15545947)
chr6 (19-71)||(32396714-32396766)
chr6 (76-141)||(25456518-25456583)
chr6 (19-71)||(17337816-17337868)
chr6 (19-71)||(26350924-26350976)
chr6 (19-71)||(32396074-32396126)
[»] chr5 (6 HSPs)
chr5 (19-71)||(5099502-5099554)
chr5 (19-71)||(35651474-35651526)
chr5 (19-71)||(42912299-42912351)
chr5 (81-138)||(38557804-38557861)
chr5 (19-71)||(8680099-8680151)
chr5 (19-71)||(18563791-18563843)
[»] scaffold1644 (1 HSPs)
scaffold1644 (19-71)||(1276-1328)
[»] chr2 (10 HSPs)
chr2 (19-71)||(2528819-2528871)
chr2 (19-71)||(4014431-4014483)
chr2 (19-71)||(10425051-10425103)
chr2 (19-71)||(15488028-15488080)
chr2 (19-71)||(28420009-28420061)
chr2 (19-71)||(38779511-38779563)
chr2 (19-72)||(39186610-39186663)
chr2 (76-141)||(40438414-40438479)
chr2 (19-71)||(7780195-7780247)
chr2 (19-71)||(40157343-40157395)
[»] chr1 (22 HSPs)
chr1 (19-71)||(4883440-4883492)
chr1 (19-71)||(6328752-6328804)
chr1 (19-71)||(7820264-7820316)
chr1 (19-71)||(7943768-7943820)
chr1 (19-71)||(9618881-9618933)
chr1 (19-71)||(18609320-18609372)
chr1 (19-71)||(21700702-21700754)
chr1 (19-71)||(37991785-37991837)
chr1 (19-71)||(39895123-39895175)
chr1 (19-71)||(45780355-45780407)
chr1 (19-71)||(49502264-49502316)
chr1 (19-71)||(7820697-7820749)
chr1 (19-71)||(19914684-19914736)
chr1 (19-71)||(23442432-23442484)
chr1 (19-71)||(26606938-26606990)
chr1 (19-71)||(26607352-26607403)
chr1 (19-71)||(35254704-35254756)
chr1 (19-71)||(35719365-35719417)
chr1 (19-71)||(46908535-46908587)
chr1 (19-71)||(47652903-47652955)
chr1 (19-71)||(49661614-49661666)
chr1 (19-71)||(51290489-51290540)


Alignment Details
Target: chr3 (Bit Score: 181; Significance: 5e-98; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 181; E-Value: 5e-98
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 53643584 - 53643792
Alignment:
Q  1 attcttattaaggtatatattgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatatatttgggaaaattgcactcacctacctta 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  53643584 attcttattaaggtatatattgtttgaaatgtaccaaaataatgattgaaacaatcaaaattaataaatatattagggaaaattgcactcacctacctta 53643683  T
Q  101 aggtttcattgaatatcaaatacaccccctctagttttaaactcaaaaataacctggcttaattaattttttaattgacacataccccctctagtctaac 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  53643684 aggtttcattgaatatcaaatacaccccctctagttttaaactcaacaataacctcgcttaattaatttttcaattgacacataccccttctagtctaac 53643783  T
Q  201 ggcgcttgc 209  Q
    |||||||||    
T  53643784 ggcgcttgc 53643792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 53642989 - 53642919
Alignment:
Q  1 attcttattaaggtatatattgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    |||||||||||||||||||| |||||||||||  | ||||||| |||||||||| |||||| |||||||||    
T  53642989 attcttattaaggtatatatcgtttgaaatgtgtcaaaataatgattgaaacaaccaaaatcaataaatat 53642919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 36719406 - 36719354
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||| |||||||||    
T  36719406 attgtttgaaacgtaccaaaataatgattgaaacaatcaaaatcaataaatat 36719354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 53644405 - 53644340
Alignment:
Q  80 aaattgcactcacctaccttaaggtttcattgaatatcaaatacaccccctctagttttaaactcaa 146  Q
    ||||||||| || ||  ||| |||||||||||||||||| ||||| |||||||||||||||||||||    
T  53644405 aaattgcacacaactcacttgaggtttcattgaatatcacataca-cccctctagttttaaactcaa 53644340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 4014709 - 4014657
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||||||||| ||||||| ||| ||||| ||||||| |||||||||    
T  4014709 attgtttgaaatgtaccaaaataatgatttaaacattcaaaatcaataaatat 4014657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 4331664 - 4331716
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  4331664 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 4331716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 6144190 - 6144242
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  6144190 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 6144242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 10492304 - 10492252
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  10492304 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 10492252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 40798822 - 40798874
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  40798822 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 40798874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 42148885 - 42148937
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  42148885 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 42148937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 51755367 - 51755419
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  51755367 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 51755419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 52514913 - 52514965
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  52514913 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 52514965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 47443644 - 47443593
Alignment:
Q  20 ttgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    |||||||||||||| | ||||||| ||| ||||||||||||| |||||||||    
T  47443644 ttgtttgaaatgtagcaaaataatgatttaaacaatcaaaatcaataaatat 47443593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 22935588 - 22935535
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaac-aatcaaaattaataaatat 71  Q
    |||| |||||||||||| ||||||| |||||||| ||||||||| |||||||||    
T  22935588 attgcttgaaatgtaccaaaataatgattgaaacaaatcaaaatcaataaatat 22935535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 4014958 - 4015010
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||  ||||||| ||||||||| ||||||| |||||||||    
T  4014958 attgtttgaaacgtactaaaataatgattgaaacattcaaaatcaataaatat 4015010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 34542939 - 34542991
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| | ||||||| ||||||| |||||||||    
T  34542939 attgtttgaaacgtaccaaaataatgagtgaaacattcaaaatcaataaatat 34542991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 40877669 - 40877721
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| |||||||||  |||||| |||||||||    
T  40877669 attgtttgaaacgtaccaaaataatgattgaaacatacaaaatcaataaatat 40877721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 55176244 - 55176296
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||| | ||||||| ||||||||| ||||||| |||||||||    
T  55176244 attgtttgaaacgtatcaaaataatcattgaaacattcaaaatcaataaatat 55176296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 2e-35; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 78 - 209
Target Start/End: Original strand, 22112617 - 22112748
Alignment:
Q  78 gaaaattgcactcacctaccttaaggtttcattgaatatcaaatacaccccctctagttttaaactcaaaaataacctggcttaattaattttttaattg 177  Q
    ||||||||||||||||| | |||| |||||||||||||||| |||||||||||||  |||||||||||| | | ||||  |||||||||||||| |||||    
T  22112617 gaaaattgcactcacctcctttaaagtttcattgaatatcacatacaccccctctgattttaaactcaacacttacctcccttaattaatttttcaattg 22112716  T
Q  178 acacataccccctctagtctaacggcgcttgc 209  Q
    |||||||||||||||  |||||||||||||||    
T  22112717 acacataccccctcttttctaacggcgcttgc 22112748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 78 - 209
Target Start/End: Complemental strand, 40493834 - 40493703
Alignment:
Q  78 gaaaattgcactcacctaccttaaggtttcattgaatatcaaatacaccccctctagttttaaactcaaaaataacctggcttaattaattttttaattg 177  Q
    ||||||||||||||||| | |||| |||||||||||||||| |||||||||||||  |||||||||||| | | ||||  |||||||||||||| |||||    
T  40493834 gaaaattgcactcacctcctttaaagtttcattgaatatcacatacaccccctctgattttaaactcaacacttacctcccttaattaatttttcaattg 40493735  T
Q  178 acacataccccctctagtctaacggcgcttgc 209  Q
    |||||||||||||||  |||||||||||||||    
T  40493734 acacataccccctcttttctaacggcgcttgc 40493703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 146
Target Start/End: Original strand, 40493094 - 40493160
Alignment:
Q  80 aaattgcactcacctaccttaaggtttcattgaatatcaaatacaccccctctagttttaaactcaa 146  Q
    |||||||| |||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  40493094 aaattgcattcacctcccttgaggtttcattgaatatcacatacaccccctctagttttaaactcaa 40493160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 146
Target Start/End: Complemental strand, 22113333 - 22113291
Alignment:
Q  104 tttcattgaatatcaaatacaccccctctagttttaaactcaa 146  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  22113333 tttcattgaatatcacatacaccccctctagttttaaactcaa 22113291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 189
Target Start/End: Original strand, 43902766 - 43902875
Alignment:
Q  80 aaattgcactcacctaccttaaggtttcattgaatatcaaatacaccccctctagttttaaactcaaaaataacctggcttaattaattttttaattgac 179  Q
    |||||||||| |||| ||||||| ||||| ||||||||| | ||| ||||||||||||||||||| | | | || |  |||||||||||||  |||||||    
T  43902766 aaattgcacttacctcccttaagatttcactgaatatcacaaacatcccctctagttttaaactcgacactcacatctcttaattaattttcaaattgac 43902865  T
Q  180 acataccccc 189  Q
    | | ||||||    
T  43902866 atagaccccc 43902875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 43903413 - 43903349
Alignment:
Q  80 aaattgcactcacctaccttaaggtttcattgaatatcaaatacaccccctctagttttaaactc 144  Q
    |||||||||| || | |||| |||||||||||||||||| | ||||| |||||||||||||||||    
T  43903413 aaattgcactaacttcccttgaggtttcattgaatatcacaaacacctcctctagttttaaactc 43903349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 10350626 - 10350693
Alignment:
Q  76 gggaaaattgcactcacctaccttaaggtttcattgaatatcaaatacaccccctctagttttaaact 143  Q
    ||||||||| || | |||| ||||||| ||||||||||| ||| | ||||||||||||||||||||||    
T  10350626 gggaaaattacattgacctcccttaagttttcattgaatgtcacaaacaccccctctagttttaaact 10350693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 7953632 - 7953684
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    |||||||||||  |||| ||||||| ||||||||| |||||||||||||||||    
T  7953632 attgtttgaaacataccaaaataatgattgaaacattcaaaattaataaatat 7953684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 25195455 - 25195403
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  25195455 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 25195403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 28564431 - 28564483
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  28564431 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 28564483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 29097722 - 29097774
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  29097722 attgtttgaaacgtaccaaaataatgattgaaacattcaaaataaataaatat 29097774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 30471401 - 30471453
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  30471401 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 30471453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 31512515 - 31512463
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  31512515 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 31512463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 35839586 - 35839534
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  35839586 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 35839534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 5026751 - 5026699
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||  ||||||||| ||||||| |||||||||    
T  5026751 attgtttgaaacgtaccaaaataacgattgaaacattcaaaatcaataaatat 5026699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 26833330 - 26833382
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||| | ||||||| ||||||||| ||||||| |||||||||    
T  26833330 attgtttgaaacgtatcaaaataatgattgaaacattcaaaatcaataaatat 26833382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 27657241 - 27657189
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||  ||||||| ||||||||| ||||||| |||||||||    
T  27657241 attgtttgaaacgtactaaaataatgattgaaacattcaaaatcaataaatat 27657189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 29112971 - 29113023
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||  |||||||||    
T  29112971 attgtttgaaacgtaccaaaataattattgaaacattcaaaaacaataaatat 29113023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 32606987 - 32606935
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||| ||||| ||||||| |||||||||    
T  32606987 attgtttgaaacgtaccaaaataatgatttaaacattcaaaatcaataaatat 32606935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 5490632 - 5490566
Alignment:
Q  80 aaattgcactcacctaccttaaggtttcattgaatatcaaatacaccccctctagttttaaactcaa 146  Q
    |||||||||||| || |||||||||||||||||||||||  || || ||||||||||||||||||||    
T  5490632 aaattgcactcaactcccttaaggtttcattgaatatcacgtaaactccctctagttttaaactcaa 5490566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 11566684 - 11566736
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  11566684 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 11566736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 16472744 - 16472692
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  16472744 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 16472692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 16473539 - 16473591
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  16473539 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 16473591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 21343231 - 21343283
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  21343231 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 21343283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 28235395 - 28235447
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  28235395 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 28235447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 51037265 - 51037317
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  51037265 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 51037317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 54628417 - 54628485
Alignment:
Q  73 tttgggaaaattgcactcacctaccttaaggtttcattgaatatcaaatacaccccctctagttttaaa 141  Q
    |||||||||||| || |||||| ||||||| |||| || |||  |||| ||||||||||||||||||||    
T  54628417 tttgggaaaattacagtcacctcccttaagttttctttaaattacaaagacaccccctctagttttaaa 54628485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 56565998 - 56565946
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||||||||||||| | ||||| |||||||||    
T  56565998 attgtttgaaacgtaccaaaataataattgaaacatttaaaatcaataaatat 56565946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 56566514 - 56566566
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  56566514 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 56566566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 28157795 - 28157744
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||  ||||||||||||||||| ||||||| |||||||||    
T  28157795 attgtttgaaacgtaca-aaataataattgaaacattcaaaatcaataaatat 28157744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 28234660 - 28234608
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| | ||||| |||||||||    
T  28234660 attgtttgaaacgtaccaaaataatgattgaaacatttaaaatcaataaatat 28234608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 28320718 - 28320666
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| || |||||| ||||||| |||||||||    
T  28320718 attgtttgaaacgtaccaaaataatgatggaaacattcaaaatcaataaatat 28320666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 29307315 - 29307367
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    |||||||||||  |||| ||||||| ||||||||| ||||||| |||||||||    
T  29307315 attgtttgaaacttaccaaaataatgattgaaacattcaaaatcaataaatat 29307367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 36480007 - 36479955
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||  ||||||| ||||||||| ||||||| |||||||||    
T  36480007 attgtttgaaacgtacaaaaataatgattgaaacattcaaaatcaataaatat 36479955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 37295448 - 37295396
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| || || ||||||| ||||||||| ||||||| |||||||||    
T  37295448 attgtttgaaacgttccaaaataatgattgaaacattcaaaatcaataaatat 37295396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 45971652 - 45971704
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||| | ||||||| ||||||||| ||||||| |||||||||    
T  45971652 attgtttgaaacgtatcaaaataatgattgaaacattcaaaatcaataaatat 45971704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 50447268 - 50447216
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||| | ||||||| ||||||||| ||||||| |||||||||    
T  50447268 attgtttgaaacgtatcaaaataatgattgaaacattcaaaatcaataaatat 50447216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 10749521 - 10749573
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| |||||||||    
T  10749521 attgtttgaaatgtaccgaaataatgattgaaacattcaaaatcaataaatat 10749573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 23512624 - 23512676
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||| |||||||||    
T  23512624 attgtttgaaatgtaccaaaataatgattgaaacattcaaaatcaataaatat 23512676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 2334951 - 2335003
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  2334951 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 2335003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 2712619 - 2712567
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  2712619 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 2712567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 4528344 - 4528292
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||| | ||||| ||||||||||||||||| ||||||| |||||||||    
T  4528344 attgtttgatacgtaccaaaataataattgaaacattcaaaatcaataaatat 4528292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 30026118 - 30026170
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  30026118 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 30026170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 34798692 - 34798744
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  34798692 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 34798744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 44934123 - 44934071
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  44934123 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 44934071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 3695964 - 3696014
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaat 69  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||    
T  3695964 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaat 3696014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 4394886 - 4394938
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||| | ||||||| ||||||| | |||||||||||||||||    
T  4394886 attgtttgaaacgtatcaaaataatgattgaaatattcaaaattaataaatat 4394938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 23512262 - 23512210
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||  ||||||| ||||||||| ||||||| |||||||||    
T  23512262 attgtttgaaacgtactaaaataatgattgaaacattcaaaatcaataaatat 23512210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 34502994 - 34503046
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||| ||| |||||||||    
T  34502994 attgtttgaaacgtaccaaaataatgattgaaacattcagaatcaataaatat 34503046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 36314106 - 36314054
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| | ||||| |||||||||    
T  36314106 attgtttgaaacgtaccaaaataatgattgaaacatttaaaatcaataaatat 36314054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 38133387 - 38133335
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    |||||||||||  |||| ||||||| ||||||||| ||||||| |||||||||    
T  38133387 attgtttgaaacataccaaaataattattgaaacattcaaaatcaataaatat 38133335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 41859062 - 41859114
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| | ||||| |||||||||    
T  41859062 attgtttgaaacgtaccaaaataattattgaaacatttaaaatcaataaatat 41859114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 43263141 - 43263193
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    |||||||||||   ||| ||||||| ||||||||||||||||| |||||||||    
T  43263141 attgtttgaaacacaccaaaataatgattgaaacaatcaaaatcaataaatat 43263193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 45252455 - 45252507
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||| | ||||||| |||||||||    
T  45252455 attgtttgaaacgtaccaaaataattattgaaaaattcaaaatcaataaatat 45252507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 45410093 - 45410041
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| |||| || |||||||||    
T  45410093 attgtttgaaacgtaccaaaataatgattgaaacattcaatatcaataaatat 45410041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 45410806 - 45410858
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||| | ||||||| |||||||||    
T  45410806 attgtttgaaacgtaccaaaataatgattgaaatattcaaaatcaataaatat 45410858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 3177735 - 3177683
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||| |||||||||    
T  3177735 attgtttgaaatgtaccaaaataatgattgaaacattcaaaatcaataaatat 3177683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 9880566 - 9880633
Alignment:
Q  74 ttgggaaaattgcactcacctaccttaaggtttcattgaatatcaaatacaccccctctagttttaaa 141  Q
    ||||||||||| ||||||||| |||| || |||| || |||| |||| ||||||||||||||||||||    
T  9880566 ttgggaaaattacactcacctcccttgagttttctttaaataacaaagacaccccctctagttttaaa 9880633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 117449 - 117399
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaat 69  Q
    ||||||||||| ||||| ||||||| ||||||||| |||||||||||||||    
T  117449 attgtttgaaacgtaccaaaataatgattgaaacattcaaaattaataaat 117399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 6760681 - 6760733
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  6760681 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 6760733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 15545947 - 15545895
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  15545947 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 15545895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 32396714 - 32396766
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  32396714 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 32396766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 141
Target Start/End: Complemental strand, 25456583 - 25456518
Alignment:
Q  76 gggaaaattgcactcacctaccttaaggtttcattgaatatcaaatacaccccctctagttttaaa 141  Q
    |||||||||||||| ||||   ||||||||||| | |||| |||| |||||||||||| |||||||    
T  25456583 gggaaaattgcactaacctcgtttaaggtttcagtaaataacaaagacaccccctctaattttaaa 25456518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 17337868 - 17337816
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    |||||||||||  |||| ||||||| ||||||||| ||||||| |||||||||    
T  17337868 attgtttgaaacataccaaaataatgattgaaacattcaaaatcaataaatat 17337816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 26350924 - 26350976
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| | ||||| |||||||||    
T  26350924 attgtttgaaacgtaccaaaataatgattgaaacatttaaaatcaataaatat 26350976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 32396126 - 32396074
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||| ||| |||||||||    
T  32396126 attgtttgaaacgtaccaaaataatgattgaaacattcataatcaataaatat 32396074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 5099554 - 5099502
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| |||| ||||    
T  5099554 attgtttgaaacgtaccaaaataataattgaaacaatcaaaatcaatacatat 5099502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 35651474 - 35651526
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||| |||||||||    
T  35651474 attgtttgaaatgtaccaaaataatgattgaaacattcaaaatcaataaatat 35651526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 42912351 - 42912299
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  42912351 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 42912299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 38557804 - 38557861
Alignment:
Q  81 aattgcactcacctaccttaaggtttcattgaatatcaaatacaccccctctagtttt 138  Q
    |||||||||||||| || | ||||||||||||||  || | |||||||||||||||||    
T  38557804 aattgcactcacctcccctgaggtttcattgaatgccacagacaccccctctagtttt 38557861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 8680099 - 8680151
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||  ||||||| ||||||||| ||||||| |||||||||    
T  8680099 attgtttgaaacgtactaaaataattattgaaacattcaaaatcaataaatat 8680151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 18563791 - 18563843
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||| | ||||||| |||||||||    
T  18563791 attgtttgaaacgtaccaaaataatgattgaaatattcaaaatcaataaatat 18563843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1644 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1644
Description:

Target: scaffold1644; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 1328 - 1276
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  1328 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 1276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 2528871 - 2528819
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  2528871 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 2528819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 4014483 - 4014431
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  4014483 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 4014431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 10425103 - 10425051
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  10425103 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 10425051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 15488028 - 15488080
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||| | ||||||||||||||||| ||||||| |||||||||    
T  15488028 attgtttgaaacgtatcaaaataataattgaaacattcaaaatcaataaatat 15488080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 28420009 - 28420061
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  28420009 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 28420061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 38779511 - 38779563
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||||||||| ||||||| ||||||| | ||||||| |||||||||    
T  38779511 attgtttgaaatgtaccaaaataatgattgaaatattcaaaatcaataaatat 38779563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 39186610 - 39186663
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatata 72  Q
    ||||||||||| ||||| ||||||| ||||| ||| ||||||| ||||||||||    
T  39186610 attgtttgaaacgtaccaaaataatgattgacacattcaaaatcaataaatata 39186663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 40438414 - 40438479
Alignment:
Q  76 gggaaaattgcactcacctaccttaaggtttcattgaatatcaaatacaccccctctagttttaaa 141  Q
    |||||||||||||| ||||   ||||||||||| | |||| |||| |||||||||||| |||||||    
T  40438414 gggaaaattgcactaacctcgtttaaggtttcactaaataacaaagacaccccctctaattttaaa 40438479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 7780195 - 7780247
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||| | ||||||| ||||||||| ||||||| |||||||||    
T  7780195 attgtttgaaacgtatcaaaataatgattgaaacattcaaaatcaataaatat 7780247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 40157343 - 40157395
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||  ||||||| ||||||||| ||||||| |||||||||    
T  40157343 attgtttgaaacgtacaaaaataatgattgaaacattcaaaatcaataaatat 40157395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000001; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 4883492 - 4883440
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  4883492 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 4883440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 6328752 - 6328804
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  6328752 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 6328804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 7820316 - 7820264
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  7820316 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 7820264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 7943768 - 7943820
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  7943768 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 7943820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 9618933 - 9618881
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  9618933 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 9618881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 18609372 - 18609320
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  18609372 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 18609320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 21700702 - 21700754
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  21700702 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 21700754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 37991837 - 37991785
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  37991837 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 37991785  T

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Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 39895175 - 39895123
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  39895175 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 39895123  T

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Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 45780407 - 45780355
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  45780407 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 45780355  T

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Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 49502316 - 49502264
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||    
T  49502316 attgtttgaaacgtaccaaaataatgattgaaacattcaaaatcaataaatat 49502264  T

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Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 7820697 - 7820749
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| | ||||| |||||||||    
T  7820697 attgtttgaaacgtaccaaaataatgattgaaacatttaaaatcaataaatat 7820749  T

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Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 19914736 - 19914684
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||| | ||||||| ||||||||| ||||||| |||||||||    
T  19914736 attgtttgaaacgtatcaaaataatgattgaaacattcaaaatcaataaatat 19914684  T

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Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 23442484 - 23442432
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||  ||||||| ||||||||| ||||||| |||||||||    
T  23442484 attgtttgaaacgtactaaaataatgattgaaacattcaaaatcaataaatat 23442432  T

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Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 26606990 - 26606938
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| ||||||||| | ||||| |||||||||    
T  26606990 attgtttgaaacgtaccaaaataatgattgaaacattaaaaatcaataaatat 26606938  T

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Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 26607352 - 26607403
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||  ||||||||||||||||| ||||||| |||||||||    
T  26607352 attgtttgaaacgtaca-aaataataattgaaacattcaaaatcaataaatat 26607403  T

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Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 35254756 - 35254704
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||  ||||||||| ||||||| |||||||||    
T  35254756 attgtttgaaacgtaccaaaataaagattgaaacattcaaaatcaataaatat 35254704  T

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Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 35719417 - 35719365
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||||||||  ||||||  |||||||| |||||||| |||||||||    
T  35719417 attgtttgaaatgtactaaaataaagattgaaactatcaaaatcaataaatat 35719365  T

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Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 46908587 - 46908535
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||| ||||||| |||||| || ||||||| |||||||||    
T  46908587 attgtttgaaacgtaccaaaataatgattgaagcattcaaaatcaataaatat 46908535  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 47652955 - 47652903
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| || || ||||||| ||||||||| ||||||| |||||||||    
T  47652955 attgtttgaaacgtcccaaaataatgattgaaacattcaaaatcaataaatat 47652903  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 49661614 - 49661666
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||| | ||||||| ||||||||| ||||||| |||||||||    
T  49661614 attgtttgaaacgtatcaaaataatgattgaaacattcaaaatcaataaatat 49661666  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 51290540 - 51290489
Alignment:
Q  19 attgtttgaaatgtaccgaaataataattgaaacaatcaaaattaataaatat 71  Q
    ||||||||||| ||||  ||||||||||||||||| ||||||| |||||||||    
T  51290540 attgtttgaaacgtaca-aaataataattgaaacattcaaaatcaataaatat 51290489  T

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