View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17651_high_18 (Length: 497)
Name: NF17651_high_18
Description: NF17651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17651_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 441; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 441; E-Value: 0
Query Start/End: Original strand, 1 - 480
Target Start/End: Original strand, 46072232 - 46072708
Alignment:
| Q |
1 |
tattttcggcaagatccaccactgcggcaacaaggcccatgcttttacttcttttgaactaaccagctatgttaaggatcaacattaaagaatgaacaat |
100 |
Q |
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| T |
46072232 |
tattttcggcaagatccaccactgcggcaacaaggcccatgcttttacttcttt-gaactaaccagctatgttaaggatcaacattaaagaatgaacaat |
46072330 |
T |
|
| Q |
101 |
gatgaaatcaattgcatcaactattagtatgttaacttttttgaaaagaaaatagaaaaacatgattcattaggtatatacatacaaaaacaattaaatt |
200 |
Q |
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| T |
46072331 |
gatgaaatcaattgcatcaactattagtatgttaacttttttgaaaagaaaatagaaaaacatgattcatgaggtata--catacaaaaacaattaaatt |
46072428 |
T |
|
| Q |
201 |
caatcaaccacaattacaaggaaaaggacacagtctgattattattcagttgcttaagacctgcgtttttctattactcaattaacagtgtaatactcaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46072429 |
caatcaaccacaattacaaggaaaaggacacagtctgattattattcagttgcttaagacctgcgtttttctattactcaattaacagtgtaatactcaa |
46072528 |
T |
|
| Q |
301 |
ctactgtccagttgtgtagttttcaacaatagatcagtgggatatgtacttccaatttgttgatattgttgttgtcaacaatatatcttccaaaagacag |
400 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
46072529 |
ctactgtccagttgtgtagttttcaacaaaagatcagtgggatatgtacttccaatttgttgatattgttgttgtctacaatatatcttccaaaagacag |
46072628 |
T |
|
| Q |
401 |
tggtacaataacaaattttcaaggaaatgatatttggatgtaatttaatagcgagatcatctccttcaccatcatccatg |
480 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |
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| T |
46072629 |
tggtacaataacaaattttcaaggaaatgatatttgcatgtaatttaatagtgagatcatctccttcaccatcatccatg |
46072708 |
T |
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