View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17651_high_63 (Length: 360)
Name: NF17651_high_63
Description: NF17651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17651_high_63 |
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Alignment Details
Target: chr5 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 10 - 346
Target Start/End: Original strand, 12120929 - 12121265
Alignment:
| Q |
10 |
cataggacaccaacaaaaggaagaaagggaaaaataagcaataaaaagatgaaatttttaatctcatgggaagaatgaagaaatacaacatgttcataga |
109 |
Q |
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| T |
12120929 |
cataggacaccaacaaaaggaagaaagggaaaaataagcgataaaaagatgaactttttaatctcatgggaagaatggagaaatacaacatgttcataga |
12121028 |
T |
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| Q |
110 |
cctcatgggagaaatacaagttacctctaatttcttagcaatgttagaaaaaggtacattagaaacttttggtggcatcgtaaagtacattttggtatta |
209 |
Q |
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| T |
12121029 |
cctcacgggagaaatacaagttacctctaacttcttagcaatgttagaaaaagttacattggaaacttttggtcgcatggtaaagtacattttggtaata |
12121128 |
T |
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| Q |
210 |
attggcacttttgtgtttcttatagacgtggtggtcatggagattagtgatgtggaagagggtcctctgattctgagaagatcattctttgcaacttttc |
309 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||| |
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| T |
12121129 |
attggcacttttgtgtttcttatagacgtagtggtcatggagattagtgatgtggaagagggtcctctgattttgagaagatcattcctcgcaacttttc |
12121228 |
T |
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| Q |
310 |
gagcactagttgatgttgaacaaggtgatgtaatatt |
346 |
Q |
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| T |
12121229 |
gagcacttgttgatgttgaacaaggtgatgtaatatt |
12121265 |
T |
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