View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17651_high_69 (Length: 336)
Name: NF17651_high_69
Description: NF17651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17651_high_69 |
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Alignment Details
Target: chr2 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 10769290 - 10769610
Alignment:
| Q |
1 |
aacctctaagataccttggactacaatagattgtgtcaatgcttcttcaatgagaggatcacccggagagttcaaccaagctttggtaatgacacgaata |
100 |
Q |
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| T |
10769290 |
aacctctaagataccttggactacaatagattgtgtcaatgcttcttcaatgagaggatcacccggagagttcaaccaagctttggtaacgacacgaata |
10769389 |
T |
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| Q |
101 |
gcgaattcacattcggttagaatatcggatgaacatatagtagtaatagcttcaactaagtcacttgaaagaacacttgaggaagcattcttagatttaa |
200 |
Q |
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| T |
10769390 |
gcgaattcacattcggttagaatatcggatgaacatatagtagtaatagcttcaactaagtcacttgaaagaacacttgaggaagcattcttagatttaa |
10769489 |
T |
|
| Q |
201 |
catagttgatttttgacatggtttctgttggtatgaacctgcaagataagcactgaaaatagtccaatctttggtgagctttattcttatcaatttggtt |
300 |
Q |
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| T |
10769490 |
tatagttgatttttgacatggtttctgttggtatgaacctgcaagataagcactgaaaatagtccaatctttggtgagctttattcttatcaatttggtt |
10769589 |
T |
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| Q |
301 |
tgatgatcttccaaaagattt |
321 |
Q |
| |
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||||||||||||||||||||| |
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| T |
10769590 |
tgatgatcttccaaaagattt |
10769610 |
T |
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