View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17651_low_126 (Length: 247)
Name: NF17651_low_126
Description: NF17651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17651_low_126 |
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Alignment Details
Target: chr3 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 27014853 - 27015067
Alignment:
| Q |
18 |
aataagctctcagaaaagttcagtttttgttacacacaaaaatcggacatgacaatcaaagttcaaatgttgtgatttttaatttgtaagagatgtgcat |
117 |
Q |
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| T |
27014853 |
aataagctctcagaaaagttcagtttttgttacacacaaaagtcggacatgaaaatcaaagttcaaatgttgtgatttttaatttgtaagagatgtgcat |
27014952 |
T |
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| Q |
118 |
ataagaaatacatataaattatgttgataacattcattggttgtcacctctttttactacagtaaggaaatgaaactcagaatcatccaaccatggtcct |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
27014953 |
ataagaaatacatataaattatgttgataacattcattggttgtcacctctttttactacagtaacgaaatgaaactcagaatcatccaaccatggtcct |
27015052 |
T |
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| Q |
218 |
ctttcgtcctctctg |
232 |
Q |
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||||||||||||||| |
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| T |
27015053 |
ctttcgtcctctctg |
27015067 |
T |
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