View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17651_low_5 (Length: 605)

Name: NF17651_low_5
Description: NF17651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17651_low_5
NF17651_low_5
[»] chr6 (20 HSPs)
chr6 (2-302)||(21424252-21424549)
chr6 (406-605)||(28997203-28997401)
chr6 (406-605)||(34948277-34948475)
chr6 (400-605)||(399092-399297)
chr6 (467-605)||(29743758-29743896)
chr6 (467-605)||(33228891-33229029)
chr6 (403-604)||(28931483-28931683)
chr6 (405-555)||(23217452-23217600)
chr6 (334-391)||(21424643-21424700)
chr6 (406-605)||(13838271-13838472)
chr6 (338-394)||(21419308-21419364)
chr6 (403-604)||(10231775-10231975)
chr6 (334-391)||(10026140-10026197)
chr6 (475-604)||(31373247-31373376)
chr6 (334-394)||(10027124-10027184)
chr6 (24-87)||(10026471-10026534)
chr6 (334-396)||(33595608-33595670)
chr6 (543-604)||(4335257-4335318)
chr6 (330-390)||(3218152-3218212)
chr6 (334-402)||(3922827-3922895)
[»] chr8 (39 HSPs)
chr8 (2-300)||(14161102-14161397)
chr8 (403-605)||(9175607-9175808)
chr8 (406-605)||(42231410-42231608)
chr8 (406-604)||(9877694-9877891)
chr8 (406-605)||(3648288-3648486)
chr8 (467-605)||(7278496-7278634)
chr8 (406-605)||(378897-379094)
chr8 (406-605)||(2728689-2728887)
chr8 (406-605)||(16787521-16787719)
chr8 (414-605)||(34136305-34136495)
chr8 (467-605)||(4404481-4404619)
chr8 (400-605)||(39914989-39915194)
chr8 (404-604)||(19061-19262)
chr8 (334-394)||(14161495-14161555)
chr8 (406-605)||(23402581-23402779)
chr8 (406-598)||(3435726-3435917)
chr8 (405-605)||(40401001-40401200)
chr8 (467-605)||(29727938-29728074)
chr8 (405-605)||(32539972-32540158)
chr8 (394-601)||(29351839-29352045)
chr8 (488-605)||(40470118-40470235)
chr8 (338-392)||(14156163-14156217)
chr8 (467-604)||(32964064-32964201)
chr8 (540-605)||(36409021-36409086)
chr8 (392-605)||(29892039-29892248)
chr8 (436-593)||(15541743-15541899)
chr8 (330-399)||(20178363-20178432)
chr8 (330-399)||(20223091-20223160)
chr8 (433-562)||(33639154-33639282)
chr8 (549-605)||(15838760-15838816)
chr8 (468-552)||(35852495-35852579)
chr8 (334-397)||(14577154-14577217)
chr8 (406-552)||(17479956-17480101)
chr8 (333-395)||(30928309-30928371)
chr8 (334-396)||(35482990-35483052)
chr8 (332-389)||(17844167-17844224)
chr8 (334-391)||(30928601-30928658)
chr8 (334-394)||(27912386-27912446)
chr8 (334-394)||(27958805-27958865)
[»] chr7 (41 HSPs)
chr7 (2-300)||(29706486-29706781)
chr7 (392-605)||(49010207-49010420)
chr7 (406-605)||(38637878-38638076)
chr7 (406-605)||(43183964-43184162)
chr7 (406-605)||(3113616-3113814)
chr7 (406-605)||(5555937-5556135)
chr7 (406-605)||(33686036-33686234)
chr7 (400-605)||(14776594-14776799)
chr7 (406-605)||(8867227-8867425)
chr7 (406-605)||(40919517-40919715)
chr7 (406-605)||(26625218-26625416)
chr7 (467-605)||(7003198-7003336)
chr7 (467-605)||(7049069-7049207)
chr7 (467-605)||(11020585-11020723)
chr7 (334-393)||(29706877-29706936)
chr7 (467-605)||(34388636-34388774)
chr7 (406-604)||(36631292-36631488)
chr7 (468-604)||(20606099-20606235)
chr7 (406-574)||(37001736-37001903)
chr7 (406-605)||(8394600-8394797)
chr7 (475-604)||(13072424-13072553)
chr7 (338-392)||(29701543-29701597)
chr7 (403-604)||(23582442-23582642)
chr7 (392-483)||(8722827-8722917)
chr7 (453-604)||(20609392-20609542)
chr7 (475-604)||(20611881-20612010)
chr7 (406-525)||(36658721-36658839)
chr7 (172-223)||(41172215-41172266)
chr7 (330-392)||(31894257-31894319)
chr7 (433-592)||(12224506-12224661)
chr7 (330-399)||(44307603-44307672)
chr7 (403-503)||(31252295-31252394)
chr7 (330-392)||(31894539-31894601)
chr7 (330-391)||(1511190-1511251)
chr7 (334-397)||(1511475-1511538)
chr7 (334-393)||(10878623-10878682)
chr7 (536-603)||(32199162-32199229)
chr7 (538-605)||(45709987-45710054)
chr7 (334-396)||(28408529-28408591)
chr7 (535-601)||(28837412-28837478)
chr7 (557-605)||(36658652-36658700)
[»] chr1 (25 HSPs)
chr1 (400-605)||(41971746-41971951)
chr1 (400-605)||(3829456-3829659)
chr1 (406-605)||(11957845-11958043)
chr1 (406-605)||(35908001-35908199)
chr1 (467-605)||(7433895-7434033)
chr1 (406-605)||(17445767-17445965)
chr1 (467-605)||(23313468-23313606)
chr1 (467-605)||(42310495-42310633)
chr1 (406-605)||(32981551-32981749)
chr1 (487-581)||(32944405-32944499)
chr1 (475-604)||(5715373-5715502)
chr1 (488-605)||(33490179-33490296)
chr1 (508-583)||(7350228-7350303)
chr1 (432-605)||(28463421-28463582)
chr1 (170-223)||(19832206-19832259)
chr1 (334-394)||(12115240-12115300)
chr1 (467-562)||(42412370-42412464)
chr1 (487-561)||(18716322-18716396)
chr1 (400-604)||(17744599-17744802)
chr1 (330-393)||(7113863-7113926)
chr1 (334-397)||(19897170-19897233)
chr1 (337-392)||(40290073-40290128)
chr1 (334-396)||(17611713-17611775)
chr1 (330-396)||(25780173-25780239)
chr1 (467-552)||(3604778-3604863)
[»] chr4 (52 HSPs)
chr4 (406-605)||(3292392-3292590)
chr4 (406-605)||(28876810-28877008)
chr4 (435-605)||(29995507-29995676)
chr4 (406-605)||(6235983-6236181)
chr4 (467-605)||(10352439-10352577)
chr4 (406-605)||(6689731-6689929)
chr4 (406-605)||(42333270-42333468)
chr4 (406-605)||(33135940-33136138)
chr4 (406-605)||(35546426-35546623)
chr4 (406-605)||(43143080-43143278)
chr4 (400-605)||(13012663-13012868)
chr4 (400-605)||(20129788-20129993)
chr4 (400-605)||(26438766-26438971)
chr4 (467-605)||(30077191-30077329)
chr4 (400-605)||(34406771-34406976)
chr4 (400-605)||(43356379-43356584)
chr4 (400-605)||(47501248-47501453)
chr4 (406-605)||(25931183-25931381)
chr4 (406-605)||(17510723-17510925)
chr4 (400-605)||(36381836-36382039)
chr4 (406-601)||(48989806-48990000)
chr4 (432-602)||(29134152-29134321)
chr4 (438-605)||(48130451-48130617)
chr4 (406-605)||(30110436-30110634)
chr4 (467-605)||(30216301-30216437)
chr4 (468-604)||(26546856-26546992)
chr4 (405-604)||(13502113-13502310)
chr4 (495-605)||(40529490-40529600)
chr4 (540-605)||(13394870-13394935)
chr4 (432-604)||(56225778-56225950)
chr4 (469-604)||(4038262-4038397)
chr4 (406-525)||(13390943-13391061)
chr4 (334-397)||(21360451-21360514)
chr4 (330-397)||(30055488-30055555)
chr4 (411-585)||(49062453-49062626)
chr4 (540-605)||(1818191-1818256)
chr4 (419-604)||(31853701-31853885)
chr4 (467-605)||(50204643-50204771)
chr4 (468-604)||(9415373-9415509)
chr4 (406-520)||(44157182-44157295)
chr4 (543-604)||(29094622-29094683)
chr4 (334-390)||(30799612-30799668)
chr4 (549-604)||(5290915-5290970)
chr4 (24-87)||(21360788-21360851)
chr4 (400-503)||(26449291-26449393)
chr4 (334-397)||(37872761-37872824)
chr4 (467-514)||(40529651-40529698)
chr4 (330-397)||(46143555-46143622)
chr4 (334-396)||(13294891-13294953)
chr4 (334-392)||(25297679-25297737)
chr4 (331-391)||(30055208-30055268)
chr4 (330-394)||(42856801-42856865)
[»] chr5 (41 HSPs)
chr5 (406-605)||(15959441-15959639)
chr5 (467-605)||(23034448-23034586)
chr5 (406-605)||(13818452-13818650)
chr5 (406-605)||(31680840-31681038)
chr5 (406-605)||(33430794-33430992)
chr5 (468-605)||(192380-192517)
chr5 (406-605)||(39657022-39657223)
chr5 (406-605)||(31501214-31501412)
chr5 (400-605)||(26282805-26283010)
chr5 (467-605)||(31271880-31272018)
chr5 (400-605)||(36293108-36293313)
chr5 (406-605)||(16333395-16333593)
chr5 (467-605)||(36291844-36291982)
chr5 (467-605)||(37255078-37255216)
chr5 (467-605)||(43069330-43069468)
chr5 (406-605)||(1775871-1776068)
chr5 (406-605)||(17332115-17332313)
chr5 (487-605)||(10034377-10034495)
chr5 (467-605)||(12278412-12278550)
chr5 (434-605)||(38268944-38269103)
chr5 (400-605)||(39435171-39435376)
chr5 (403-601)||(24792894-24793096)
chr5 (467-601)||(27750712-27750846)
chr5 (392-605)||(16155472-16155683)
chr5 (488-567)||(28801712-28801791)
chr5 (467-604)||(18266162-18266303)
chr5 (10-81)||(24867935-24868008)
chr5 (432-550)||(30297492-30297606)
chr5 (334-402)||(35362206-35362274)
chr5 (510-604)||(11779160-11779254)
chr5 (563-605)||(30297604-30297646)
chr5 (334-391)||(27843023-27843080)
chr5 (443-562)||(8788334-8788452)
chr5 (334-393)||(15179078-15179137)
chr5 (549-604)||(20368518-20368573)
chr5 (334-393)||(32994443-32994502)
chr5 (334-392)||(32458075-32458133)
chr5 (334-396)||(35363278-35363340)
chr5 (505-590)||(1050565-1050650)
chr5 (334-391)||(19558161-19558218)
chr5 (533-605)||(23034279-23034351)
[»] chr3 (35 HSPs)
chr3 (406-605)||(6930389-6930587)
chr3 (406-605)||(40081235-40081433)
chr3 (435-603)||(27935652-27935818)
chr3 (400-605)||(6268913-6269118)
chr3 (467-605)||(19565056-19565194)
chr3 (400-605)||(22967931-22968136)
chr3 (406-605)||(5135761-5135959)
chr3 (403-514)||(8257407-8257517)
chr3 (406-605)||(45183454-45183651)
chr3 (467-605)||(45336347-45336485)
chr3 (406-601)||(11017765-11017959)
chr3 (436-605)||(29564674-29564846)
chr3 (400-605)||(39772265-39772470)
chr3 (406-605)||(6503065-6503263)
chr3 (467-605)||(19390621-19390760)
chr3 (467-605)||(33041425-33041561)
chr3 (406-605)||(34083615-34083812)
chr3 (467-604)||(27912478-27912615)
chr3 (494-604)||(35937696-35937806)
chr3 (334-393)||(52091714-52091773)
chr3 (334-392)||(52090881-52090939)
chr3 (392-489)||(3159292-3159388)
chr3 (330-395)||(3612591-3612656)
chr3 (487-562)||(7468824-7468899)
chr3 (549-605)||(8257301-8257357)
chr3 (334-397)||(5048383-5048446)
chr3 (24-87)||(5048720-5048783)
chr3 (403-450)||(16094646-16094693)
chr3 (558-605)||(38282889-38282936)
chr3 (333-396)||(44506331-44506394)
chr3 (496-602)||(219189-219295)
chr3 (330-392)||(17574372-17574434)
chr3 (330-396)||(22975629-22975695)
chr3 (334-394)||(8851801-8851861)
chr3 (334-398)||(28830041-28830105)
[»] chr2 (31 HSPs)
chr2 (406-605)||(45419056-45419254)
chr2 (392-605)||(7072016-7072228)
chr2 (406-605)||(4554689-4554886)
chr2 (406-605)||(35963165-35963363)
chr2 (400-605)||(17444528-17444733)
chr2 (467-605)||(31581175-31581313)
chr2 (400-605)||(41251121-41251326)
chr2 (406-605)||(32126683-32126881)
chr2 (467-605)||(2957700-2957838)
chr2 (400-605)||(6403291-6403496)
chr2 (467-605)||(12756393-12756531)
chr2 (467-605)||(18982064-18982202)
chr2 (435-592)||(45121695-45121851)
chr2 (406-605)||(26162198-26162396)
chr2 (403-604)||(26591517-26591716)
chr2 (468-604)||(37621618-37621754)
chr2 (406-605)||(2286263-2286460)
chr2 (488-605)||(26238414-26238531)
chr2 (416-604)||(18829331-18829518)
chr2 (467-605)||(42442459-42442597)
chr2 (495-605)||(44084185-44084295)
chr2 (467-604)||(816613-816750)
chr2 (515-604)||(21556570-21556659)
chr2 (468-603)||(17373394-17373530)
chr2 (334-393)||(8322471-8322530)
chr2 (438-525)||(8058871-8058957)
chr2 (489-604)||(25391454-25391568)
chr2 (334-397)||(27360410-27360473)
chr2 (334-394)||(30337717-30337777)
chr2 (334-392)||(17846007-17846065)
chr2 (334-391)||(30337424-30337481)
[»] scaffold0069 (1 HSPs)
scaffold0069 (400-605)||(18033-18238)
[»] scaffold0134 (1 HSPs)
scaffold0134 (405-605)||(17781-17978)
[»] scaffold0041 (1 HSPs)
scaffold0041 (406-605)||(53380-53578)
[»] scaffold0002 (2 HSPs)
scaffold0002 (400-605)||(479944-480149)
scaffold0002 (334-394)||(330194-330254)
[»] scaffold0166 (1 HSPs)
scaffold0166 (403-601)||(35277-35479)
[»] scaffold0495 (1 HSPs)
scaffold0495 (403-604)||(8495-8695)
[»] scaffold0831 (1 HSPs)
scaffold0831 (433-573)||(3383-3521)
[»] scaffold0311 (1 HSPs)
scaffold0311 (334-394)||(12885-12945)
[»] scaffold0029 (1 HSPs)
scaffold0029 (334-394)||(136913-136973)
[»] scaffold0347 (2 HSPs)
scaffold0347 (330-391)||(11940-12001)
scaffold0347 (335-392)||(12223-12280)


Alignment Details
Target: chr6 (Bit Score: 251; Significance: 1e-139; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 2 - 302
Target Start/End: Original strand, 21424252 - 21424549
Alignment:
Q  2 gtaataagatgtatgaatactcaccacaaagttcctacaaccccaaaatttccttcctctattaggacccattttcgtcactgttctaataacatgtcgc 101  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21424252 gtaataatatgtatgaatactcaccacaaagttcctacaaccccaaaatttacttcctctattaggacccattttcgtcactgttctaataacatgtagc 21424351  T
Q  102 atcttacagaaccattctcgcgtgaacaggttacgtcccccagaaatgaaggaaccgaaaaatgattgtgtgtgtgaaccttgtgtgcgtgaggatgcca 201  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21424352 atcttacagaaacattctcgcgtgaacaggttgcgtcccccagaaatgaaagaaccgaaaaatgattgtgtgtgtgaaccttgtgtgcgtaaggatgcca 21424451  T
Q  202 tgaattttgagatttgattttttagggttcttgcaggttgaagggtgactgagaagaagaagcttgtgtgaacattggagaagatgaacataaagttaaa 301  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||| ||||||    
T  21424452 tgaattttgagatttgattttttagggttcttgcaggttgaagggtgattg---agaagaagcttgtgtgaacattggagaagatgaacataacgttaaa 21424548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 28997401 - 28997203
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  28997401 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaatgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 28997303  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| || |||| ||||| ||| ||||||||||| ||||||||||||||    
T  28997302 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcgcagtgaaattttgtagtctttaaacgagatacaaattaattata 28997203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 34948277 - 34948475
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  34948277 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 34948375  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  34948376 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 34948475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 400 - 605
Target Start/End: Complemental strand, 399297 - 399092
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  399297 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 399199  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  399198 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 399099  T
Q  599 aattata 605  Q
    |||||||    
T  399098 aattata 399092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 29743896 - 29743758
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||| ||||||||||  |||||||||  ||||||||| || || ||||| || |||||| |||||||  |||||||||    
T  29743896 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttaattccctaattttgtaggcatgattggaacatgataagaacattcacaatg 29743797  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| ||||||||||||||| ||||||||||||||    
T  29743796 aaattttgtagtttttaaacgagatacaaattaattata 29743758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 33228891 - 33229029
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||| ||| ||||||  ||||||||| |||||||||| ||  | |||||  |||||||| ||||||| ||||||||||    
T  33228891 aaaattgaaattttgttccgcgtaagtgtacactcacaagtcaaatttagttccctaattttgcaggcatgactagaacatgataagaaccttcacaatg 33228990  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| ||||||||||||||| ||||||||||||||    
T  33228991 aaattttgtagtttttaaacgagatacaaattaattata 33229029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 403 - 604
Target Start/End: Complemental strand, 28931683 - 28931483
Alignment:
Q  403 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 502  Q
    ||||||||||  ||||||||||| |||  ||| ||||||||| |||||  ||| |||| |||| ||| ||| |||||||||||  ||||||||||||| |    
T  28931683 tgcaaagtttcgtagcatttcaaagacatttcgatttattttaatttttgaaccaaaatgtgcgaaa-ttgcaattttgttccgtgtaagcgtatactta 28931585  T
Q  503 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 602  Q
    | ||||||||||||||| ||||| || || ||||||||||||  | |||| ||||||||  ||| | ||||| ||||||||||| ||| | |||||||||    
T  28931584 cgggtcaaatttcgttctctaattttgtaggcatggttagaaggtcataacaatcttcaacatgcaattttgaagtttttaaacaagataaaaattaatt 28931485  T
Q  603 at 604  Q
    ||    
T  28931484 at 28931483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 405 - 555
Target Start/End: Complemental strand, 23217600 - 23217452
Alignment:
Q  405 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 504  Q
    |||||||| ||| |||||| | || | || |||||||||||||||| || ||||| | || ||||||||||||||||||||||||||  ||||||||       
T  23217600 caaagtttcatatcatttcgaagatgttttaatttatttttatttttaaccaaaacg-tg-aaaaattgaaattttgttcctagtaattgtatactctta 23217503  T
Q  505 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaa 555  Q
    |||||||||||||||| |||| || || |||||||||||||||||||||||    
T  23217502 ggtcaaatttcgttccttaattttgtaggcatggttagaacataataagaa 23217452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 334 - 391
Target Start/End: Original strand, 21424643 - 21424700
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21424643 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 21424700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 13838472 - 13838271
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcac-- 503  Q
    ||||||| ||| |||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  13838472 aaagtttcataacatttcgaagtcgtttaaatttattttgatttttcaactaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 13838374  T
Q  504 -tggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 602  Q
     || || ||||| |||||||||| || ||  ||||  | ||||   ||||||| |||||||||||| ||||| | ||||||||||| | |||||||||||    
T  13838373 gtgatcgaatttagttccctaattttgtagacatgactggaactagataagaaccttcacaatgaaattttgtaatttttaaacgatatacaaattaatt 13838274  T
Q  603 ata 605  Q
    |||    
T  13838273 ata 13838271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 338 - 394
Target Start/End: Complemental strand, 21419364 - 21419308
Alignment:
Q  338 aggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 394  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  21419364 aggacgaaaacgttacctaaaaataagttataggaccatttgtgtaattttgcctaa 21419308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 403 - 604
Target Start/End: Complemental strand, 10231975 - 10231775
Alignment:
Q  403 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 502  Q
    |||||| ||| |||| ||||||| || | ||| |||| ||||||||||  ||| |||| |||  ||| ||| ||||||||||  ||||| | |||| |||    
T  10231975 tgcaaaatttcatagtatttcaaagatgtttcgatttctttttatttttcaaccaaaacgtgtgaaa-ttgcaattttgttctgagtaaacatatattca 10231877  T
Q  503 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 602  Q
    |  |||||||||||||  ||||| || || ||||||||||||||  ||||||| |||||| ||||| ||||| || ||||||| |||| || ||||||||    
T  10231876 cgagtcaaatttcgttttctaattttctaggcatggttagaacaacataagaaccttcaccatgaaattttgaagattttaaatgagatacgaattaatt 10231777  T
Q  603 at 604  Q
    ||    
T  10231776 at 10231775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 334 - 391
Target Start/End: Complemental strand, 10026197 - 10026140
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 391  Q
    ||||||||| |||||||||||||||| ||||||| ||||| |||| ||||||||||||    
T  10026197 ataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgcc 10026140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 475 - 604
Target Start/End: Original strand, 31373247 - 31373376
Alignment:
Q  475 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 574  Q
    ||||||||| | |||| || |||||| || | |||||||  |||||||||| || || ||| ||||| ||||| ||||||| ||||||||  || |||||    
T  31373247 aattttgtttcgagtaggcatatactaacggatcaaattcagttccctaattttgtaggcaaggttaaaacatcataagaaccttcacaacaaaattttg 31373346  T
Q  575 cagtttttaaacgagagacaaattaattat 604  Q
     |||||||||||||| ||  ||||||||||    
T  31373347 aagtttttaaacgagtgatgaattaattat 31373376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 394
Target Start/End: Original strand, 10027124 - 10027184
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 394  Q
    ||||||||| |||| ||||||||||| ||||||| ||||| |||| ||||||| |||||||    
T  10027124 ataaaggaccaaaatgttacctaaaattaagttaagggactatttatgtaattatgcctaa 10027184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 10026534 - 10026471
Alignment:
Q  24 accacaaagttcctacaaccccaaaatttccttcctctattaggacccattttcgtcactgttc 87  Q
    |||||| | |||||||||| ||||||||| ||| ||||||  ||||||||||| ||||||||||    
T  10026534 accacacaattcctacaacaccaaaattttctttctctatagggacccatttttgtcactgttc 10026471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 396
Target Start/End: Original strand, 33595608 - 33595670
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 396  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  33595608 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 33595670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 543 - 604
Target Start/End: Complemental strand, 4335318 - 4335257
Alignment:
Q  543 aacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 604  Q
    ||||| |||| || |||||| || || ||||| ||||||||||||||||| |||||||||||    
T  4335318 aacatcataataaacttcaccattaaattttgtagtttttaaacgagagataaattaattat 4335257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 390
Target Start/End: Complemental strand, 3218212 - 3218152
Alignment:
Q  330 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgc 390  Q
    |||||||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||    
T  3218212 aaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgc 3218152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 402
Target Start/End: Original strand, 3922827 - 3922895
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaacaatt 402  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||| ||||| ||||    
T  3922827 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgccaaaaaaaaatt 3922895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 245; Significance: 1e-135; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 2 - 300
Target Start/End: Original strand, 14161102 - 14161397
Alignment:
Q  2 gtaataagatgtatgaatactcaccacaaagttcctacaaccccaaaatttccttcctctattaggacccattttcgtcactgttctaataacatgtcgc 101  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14161102 gtaataatatgtatgaatactcaccacaaagttcctacaaccccaaaatttccttcctctattaggacccattttcgtcactgttctaataacatgtagc 14161201  T
Q  102 atcttacagaaccattctcgcgtgaacaggttacgtcccccagaaatgaaggaaccgaaaaatgattgtgtgtgtgaaccttgtgtgcgtgaggatgcca 201  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
T  14161202 atcttacagaaacattctcgcgtgaacaggttgcgtcccccagaaatgaaagaaccggaaaatgattgtgtgtgtgaaccttgtgtgcgtaaggatgcca 14161301  T
Q  202 tgaattttgagatttgattttttagggttcttgcaggttgaagggtgactgagaagaagaagcttgtgtgaacattggagaagatgaacataaagttaa 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||| |||||||||||||||| |||||    
T  14161302 tgaattttgagatttgattttttagggttcttgcaggttgaagggtgattg---agaagaagcttgtgtgaacattagagaagatgaacataacgttaa 14161397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 403 - 605
Target Start/End: Complemental strand, 9175808 - 9175607
Alignment:
Q  403 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 502  Q
    ||||||||||||||||||||| | || ||||| ||||  |||||||||  ||| |||| |||||||| || |||||||||||||||||||| | ||||||    
T  9175808 tgcaaagttttatagcatttcgaagatgattctattttattttatttttcaactaaaatgtgcaaaa-ttaaaattttgttcctagtaagcatttactca 9175710  T
Q  503 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 602  Q
      |||||||||| |||||||||| || || |||  |||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||    
T  9175709 tgggtcaaattttgttccctaattttgtaggcaatgttagaacataataagatccttcactatgaagttttgcagtttttaaacgagagacaaattaatt 9175610  T
Q  603 ata 605  Q
    |||    
T  9175609 ata 9175607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 42231608 - 42231410
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    |||||||||||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  42231608 aaagttttatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 42231510  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||| ||||| ||||| | ||||||||||||| ||||||||||||||    
T  42231509 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacgatgaaattttgtaatttttaaacgagatacaaattaattata 42231410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 406 - 604
Target Start/End: Complemental strand, 9877891 - 9877694
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  |||||| |||||||||      
T  9877891 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcatatactcacaa 9877793  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 604  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||| ||||||||||| |||||||||||||    
T  9877792 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtctttaaacgagatacaaattaattat 9877694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 3648288 - 3648486
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| ||| |||||||| | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  3648288 aaagtttcataacatttcaaagtcgtttaaatttattttgatttttcaactaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 3648386  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| | ||||||||||||    
T  3648387 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagataaaaattaattata 3648486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 7278634 - 7278496
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  7278634 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 7278535  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| ||| ||||||||||| ||||||||||||||    
T  7278534 aaattttgtagtctttaaacgagatacaaattaattata 7278496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 379094 - 378897
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || ||||||||||||| ||||| || ||||| | ||||||| ||||| ||||||||| |||||| |||||||||  |    
T  379094 aaagtttcatagcatttcgaagtcgtttcaatttattttaattttgaaccaaaacg-tgcaaaa-ttgaatttttgttccgagtaagtgtatactcatag 378997  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    |||||||||  ||||||||| ||  | |||||  |||||||| ||||||| ||||||||| || ||||| ||||||||||||||| ||||||||||||||    
T  378996 gtcaaatttaattccctaattttgcaggcatgactagaacatgataagaaacttcacaataaaattttgtagtttttaaacgagatacaaattaattata 378897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 2728689 - 2728887
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| || ||||| ||||||||||||||   ||||| ||||||||||      
T  2728689 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgttcaaaa-ttgaaattttgttctgcgtaagtgtatactcacaa 2728787  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || |||||| |||||||||| ||||| |||||  |||||||| ||||||| ||||||| |||| ||||  ||||||||||||||| ||||||||||||||    
T  2728788 gttaaatttagttccctaattttataggcatgactagaacatgataagaaccttcacagtgaaattttatagtttttaaacgagatacaaattaattata 2728887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 16787521 - 16787719
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  16787521 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 16787619  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||| ||| |||||||  |||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  16787620 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaactttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 16787719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 414 - 605
Target Start/End: Original strand, 34136305 - 34136495
Alignment:
Q  414 atagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatt 513  Q
    |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||  ||||||||    
T  34136305 atagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaagtcaaatt 34136403  T
Q  514 tcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    | |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  34136404 tagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 34136495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 4404619 - 4404481
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||| ||| ||    
T  4404619 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaacctttacagtg 4404520  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| ||| ||||||||||| ||||||||||||||    
T  4404519 aaattttgtagtctttaaacgagatacaaattaattata 4404481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 400 - 605
Target Start/End: Complemental strand, 39915194 - 39914989
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  39915194 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 39915096  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  39915095 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 39914996  T
Q  599 aattata 605  Q
    |||||||    
T  39914995 aattata 39914989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 404 - 604
Target Start/End: Complemental strand, 19262 - 19061
Alignment:
Q  404 gcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcac 503  Q
    ||||||||| ||||||||||||  | || |||||||| ||| |||||  | | ||||| | ||||| ||| ||||||||||| | ||| | |||||||||    
T  19262 gcaaagtttcatagcatttcaaaaatgactcaatttagtttgatttttcatccaaaagtttcaaaatttgcaattttgttccaaataaccatatactcac 19163  T
Q  504 tggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttca-caatgaagttttgcagtttttaaacgagagacaaattaatt 602  Q
    ||||||||||| |||||||||| || |  |||||||||||| |  ||||||||||||| | | ||| ||||| ||||||||||| || ||||||||||||    
T  19162 tggtcaaattttgttccctaattttgtttgcatggttagaataccataagaatcttcaccgacgaaattttgaagtttttaaaccagggacaaattaatt 19063  T
Q  603 at 604  Q
    ||    
T  19062 at 19061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 334 - 394
Target Start/End: Original strand, 14161495 - 14161555
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 394  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14161495 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 14161555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 23402779 - 23402581
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| |   || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  |||||||||| |||||      
T  23402779 aaagtttcatagcatttcgaaatcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatgctcacaa 23402681  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||| | |||| ||||| ||| ||||||| ||| ||||||||||||||    
T  23402680 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcatagtgaaattttgtagtctttaaacaagatacaaattaattata 23402581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 406 - 598
Target Start/End: Complemental strand, 3435917 - 3435726
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| ||| |||||||| | || || |||||||||| |||||  ||| |||| | |||||| | |||||||||||||  |||||| |||||||||      
T  3435917 aaagtttcataacatttcaaagtcgtttaaatttattttgatttttcaaccaaaacgcgcaaaact-gaaattttgttccgcgtaagcatatactcacaa 3435819  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||||||| ||||||||||  | || |||||  |||||||| |||||||  |||||||| || ||||| ||||||||||||||| |||||||    
T  3435818 gtcaaatttagttccctaattatgtaggcatgactagaacatgataagaacattcacaattaaattttgtagtttttaaacgagatacaaatt 3435726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 405 - 605
Target Start/End: Original strand, 40401001 - 40401200
Alignment:
Q  405 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 504  Q
    |||||||| ||| |||||  | |||| ||| |||||||||||||||  ||| ||||  | | ||||||| |||||| |||| |||||||||||||||||     
T  40401001 caaagtttcatatcattttgaagacgtttcgatttatttttatttttcaaccaaaacatac-aaaattgcaattttattccgagtaagcgtatactcaca 40401099  T
Q  505 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 604  Q
    | ||||||||| ||||||||| |||   |||| |||||||||| ||||||| |||||  ||||  || || ||||||| |||||||||| ||||||||||    
T  40401100 gctcaaatttcattccctaattttacgggcatagttagaacatcataagaaccttcaacatgacattctggagtttttgaacgagagacgaattaattat 40401199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 29727938 - 29728074
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| ||  | |||||  ||||||  |  ||||| ||||||||||    
T  29727938 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgcaggcatgactagaac--acgaagaaccttcacaatg 29728035  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| | ||||||||||||| ||||||||||||||    
T  29728036 aaattttgtaatttttaaacgagatacaaattaattata 29728074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 405 - 605
Target Start/End: Original strand, 32539972 - 32540158
Alignment:
Q  405 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 504  Q
    |||||||| |||||||||| | |||| |||||||||||||||||||  ||| ||||  ||  ||||||||||||||||||||||||||| ||||||||      
T  32539972 caaagtttcatagcatttcgaagacgtttcaatttatttttatttttcaaccaaaacatg-taaaattgaaattttgttcctagtaagcatatactcatg 32540070  T
Q  505 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 604  Q
     ||||||||             || || ||||||||||||||||||||||| ||||| |||||| ||||  | |||||||| ||||||| ||||||||||    
T  32540071 tgtcaaatt-------------ttgtaggcatggttagaacataataagaaccttcaaaatgaaattttataatttttaaatgagagacgaattaattat 32540157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 394 - 601
Target Start/End: Complemental strand, 29352045 - 29351839
Alignment:
Q  394 aaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagc 493  Q
    |||| ||| |||||| |||  ||||||||||| |||| || ||||| ||||||||||  ||| |||| |||| ||| ||| ||||||||||||||||| |    
T  29352045 aaaaaaatctgcaaattttcgtagcatttcaaagacgttttaatttgtttttatttttcaaccaaaacgtgcgaaa-ttgcaattttgttcctagtaaac 29351947  T
Q  494 gtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagac 593  Q
    |||||||||   ||||||||  |||||||||  || || ||||||||||||||  |||| ||  ||||| ||||  ||||| ||||||||  ||||| ||    
T  29351946 gtatactcatgagtcaaattatgttccctaactttgtaggcatggttagaacagcataaaaactttcaccatgagattttggagtttttactcgagatac 29351847  T
Q  594 aaattaat 601  Q
    ||||||||    
T  29351846 aaattaat 29351839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 488 - 605
Target Start/End: Original strand, 40470118 - 40470235
Alignment:
Q  488 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacg 587  Q
    ||||||||||| ||||  | ||||||| |||||||||| || || |||||  || ||||| |||||||| ||||||||||| ||||| |||||||||| |    
T  40470118 gtaagcgtataatcacaaggcaaatttagttccctaattttgtaggcatgactaaaacatgataagaatattcacaatgaaattttgtagtttttaaatg 40470217  T
Q  588 agagacaaattaattata 605  Q
    ||| ||||||||||||||    
T  40470218 agatacaaattaattata 40470235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 338 - 392
Target Start/End: Complemental strand, 14156217 - 14156163
Alignment:
Q  338 aggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 392  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  14156217 aggacgaaaacgttacctaaaaataagttataggaccatttgtgtaattttgcct 14156163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 467 - 604
Target Start/End: Original strand, 32964064 - 32964201
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    ||||||| | ||||||||  ||||||| | || |||| ||||||||||||||||||||| || | |||||| ||| ||||| ||||| | |||||| ||     
T  32964064 aaaattgcatttttgttcagagtaagcatttaatcacgggtcaaatttcgttccctaattttgttagcatgtttataacatcataaggaccttcaccatt 32964163  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattat 604  Q
    |||||||  ||||||||||||| |  ||||||||||||    
T  32964164 aagttttagagtttttaaacgataagcaaattaattat 32964201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 540 - 605
Target Start/End: Complemental strand, 36409086 - 36409021
Alignment:
Q  540 tagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    |||||||| || |||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  36409086 tagaacatgattagaaccttcacaatgaaattttgtagtttttaaacgagatacaaattaattata 36409021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 392 - 605
Target Start/End: Original strand, 29892039 - 29892248
Alignment:
Q  392 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaa 491  Q
    |||||| |||||||||| |||| ||||||||||| || | || ||||  ||||||||||  ||| |||| ||||  |||||| |||||||||   |||||    
T  29892039 taaaaagaatttgcaaaattttgtagcatttcaaagatg-tttaatt--tttttatttttcaaccaaaacgtgc-gaaattgcaattttgttatgagtaa 29892134  T
Q  492 gcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagag 591  Q
      |||||||||| ||||||||||| ||| ||||| || ||||||||  || ||||| |||||||  |||    |||| ||||  |||||||||||||||     
T  29892135 atgtatactcacgggtcaaatttctttctctaattttctaagcatgtatataacatcataagaactttcctcgtgaatttttagagtttttaaacgagat 29892234  T
Q  592 acaaattaattata 605  Q
    || |||||||||||    
T  29892235 acgaattaattata 29892248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 436 - 593
Target Start/End: Original strand, 15541743 - 15541899
Alignment:
Q  436 atttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagca 535  Q
    ||||||||| |||||  |||||||| |||||||| || || ||||||||  | ||||| ||||||||   ||||||||  |||||||||| || ||  ||    
T  15541743 atttattttaattttccaacaaaaatgtgcaaaattttaa-ttttgttcacattaagcatatactcaggagtcaaattatgttccctaattttgtataca 15541841  T
Q  536 tggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagac 593  Q
    ||||||||||||| |||||| |||||| || || ||| | ||||| ||||| ||||||    
T  15541842 tggttagaacatagtaagaaccttcaccattaaatttgggagtttctaaacaagagac 15541899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 20178432 - 20178363
Alignment:
Q  330 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaaca 399  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||| ||||||    
T  20178432 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaaca 20178363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 20223160 - 20223091
Alignment:
Q  330 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaaca 399  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||| ||||||    
T  20223160 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaaca 20223091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 562
Target Start/End: Complemental strand, 33639282 - 33639154
Alignment:
Q  433 tcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataa 532  Q
    |||||||||||| |||||  ||| |||| |||| ||||||| ||||||  ||| ||||||| |||||||||   |||||||| |||||||||| || ||     
T  33639282 tcaatttattttgatttttcaaccaaaacgtgc-aaaattgcaatttttctccaagtaagcatatactcacacatcaaattttgttccctaattttgtag 33639184  T
Q  533 gcatggttagaacataataagaatcttcac 562  Q
    ||||||||| ||||| ||| |||| |||||    
T  33639183 gcatggttacaacattataggaatattcac 33639154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 15838816 - 15838760
Alignment:
Q  549 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||| ||||||||| || ||||| | ||||||||||||| ||||||||||||||    
T  15838816 ataagaaccttcacaataaaattttgtaatttttaaacgagatacaaattaattata 15838760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 468 - 552
Target Start/End: Original strand, 35852495 - 35852579
Alignment:
Q  468 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataa 552  Q
    |||||| ||||||||||| | |||||  ||||||||  || |||||| |||| ||||| ||||| ||||||||||||||| ||||    
T  35852495 aaattgcaattttgttccgaataagcaaatactcacgagtaaaattttgttctctaattttataggcatggttagaacatcataa 35852579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 14577154 - 14577217
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 397  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || ||||||||||||||||||    
T  14577154 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaaa 14577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 552
Target Start/End: Complemental strand, 17480101 - 17479956
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    |||||||||||||||||||   | | || |||||||||| |||||  ||| |||| |||  ||||||| |||||| |||  ||||| | |||||||||      
T  17480101 aaagttttatagcatttcataaaagcttgaatttattttgatttttcaaccaaaatgtg-taaaattgcaattttcttctgagtaaacatatactcacga 17480003  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataa 552  Q
    ||||||||| |||||||||| || || |||| ||| |||||| ||||    
T  17480002 gtcaaattttgttccctaattttgtaggcatagttggaacatcataa 17479956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 333 - 395
Target Start/End: Complemental strand, 30928371 - 30928309
Alignment:
Q  333 aataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaa 395  Q
    |||||||||| |||| ||||||||||| ||||||| ||||| | || |||||||||| |||||    
T  30928371 aataaaggacaaaaatgttacctaaaattaagttaagggactaattgtgtaattttgtctaaa 30928309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 396
Target Start/End: Original strand, 35482990 - 35483052
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 396  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  35482990 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 35483052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 389
Target Start/End: Original strand, 17844167 - 17844224
Alignment:
Q  332 aaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttg 389  Q
    |||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||    
T  17844167 aaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttg 17844224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 391
Target Start/End: Original strand, 30928601 - 30928658
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 391  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||    
T  30928601 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 30928658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 394
Target Start/End: Original strand, 27912386 - 27912446
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 394  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||    
T  27912386 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 27912446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 394
Target Start/End: Original strand, 27958805 - 27958865
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 394  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||    
T  27958805 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 27958865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 2 - 300
Target Start/End: Original strand, 29706486 - 29706781
Alignment:
Q  2 gtaataagatgtatgaatactcaccacaaagttcctacaaccccaaaatttccttcctctattaggacccattttcgtcactgttctaataacatgtcgc 101  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  29706486 gtaataatatgtatgaatactcaccacaaagttcctacaaccccaaaattttcttcctctattaggacccattttcgtcactgttctaataacatgtagc 29706585  T
Q  102 atcttacagaaccattctcgcgtgaacaggttacgtcccccagaaatgaaggaaccgaaaaatgattgtgtgtgtgaaccttgtgtgcgtgaggatgcca 201  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||    
T  29706586 atcttacagaaacattctcgcgtgaacaggttgcgtcccccagaaatgaaagaaccggaaaatgattgtgtgtgtgaaccttgtgtgcgtaaggatgcca 29706685  T
Q  202 tgaattttgagatttgattttttagggttcttgcaggttgaagggtgactgagaagaagaagcttgtgtgaacattggagaagatgaacataaagttaa 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||| |||||||||||||||| |||||    
T  29706686 tgaattttgagatttgattttttagggttcttgcaggttgaagggtgattg---agaagaagcttgtgtgaacattagagaagatgaacataacgttaa 29706781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 392 - 605
Target Start/End: Complemental strand, 49010420 - 49010207
Alignment:
Q  392 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaa 491  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||    
T  49010420 taaaaacgatttgcaaagttttatagcatttcaatgacgattctatttatttttatttttaaacaaaaacgtgcaaaaattgaaattttgttcctaataa 49010321  T
Q  492 gcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagag 591  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  49010320 gcgtatactcacaggtcaaatttcgttccctaattttataagcatggttagaacataataagaatcttcacaatgaagttttgcaatttttaaacgagag 49010221  T
Q  592 acaaattaattata 605  Q
    ||||||||||||||    
T  49010220 acaaattaattata 49010207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 38637878 - 38638076
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  38637878 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 38637976  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  38637977 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaatttttgtagtctttaaacgagatacaaattaattata 38638076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 43183964 - 43184162
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  43183964 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 43184062  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  43184063 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 43184162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 3113616 - 3113814
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  3113616 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 3113714  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  3113715 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 3113814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 5556135 - 5555937
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| ||| ||| |||| | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  5556135 aaagtttcataacatatcaaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 5556037  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  5556036 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 5555937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 33686234 - 33686036
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||  | | || || |||||||||| |||||  ||| ||||  ||||||| || ||||||||||||  ||||||||||||||||      
T  33686234 aaagtttcatagcattttgaagtcgtttaaatttattttgatttttcaaccaaaacatgcaaaa-ttaaaattttgttccgcgtaagcgtatactcacaa 33686136  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||| | || || |||||  |||||||| ||||||||||||||||| || ||||| ||||||||||||||| ||||||||||||||    
T  33686135 gtcaaatttagttccctacttttgtaggcatgactagaacatgataagaatcttcacaataaaattttgtagtttttaaacgagatacaaattaattata 33686036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 400 - 605
Target Start/End: Original strand, 14776594 - 14776799
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||||| | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  14776594 atttgtaaagtttcatagcatttcaaagtcgtttaaatttattttaatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 14776692  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| |||||||||| || || |||||  ||||| || ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  14776693 tcacaagtcaaatttagttccctaattttgtaggcatgactagaatatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 14776792  T
Q  599 aattata 605  Q
    |||||||    
T  14776793 aattata 14776799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 8867227 - 8867425
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || |  |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  8867227 aaagtttcatagcatttcgaagtcgttaaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 8867325  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||| ||| ||||||||||||||    
T  8867326 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacaagatacaaattaattata 8867425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 40919517 - 40919715
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  40919517 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 40919615  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  40919616 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 40919715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 26625416 - 26625218
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | |  | || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  26625416 aaagtttcatagcatttcgaagttgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 26625318  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || |||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| |||||| |||| ||||||||||||||    
T  26625317 gttaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaatgagatacaaattaattata 26625218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 7003336 - 7003198
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||||||||||| ||  ||||| ||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  7003336 aaaattgaaattttgttccgtgtaagcgtatactaacaagtcaagtttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 7003237  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| ||| ||||||||| | ||||||||||||||    
T  7003236 aaattttgtagtctttaaacgatatacaaattaattata 7003198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 7049207 - 7049069
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||||||||||| ||  ||||| ||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  7049207 aaaattgaaattttgttccgtgtaagcgtatactaacaagtcaagtttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 7049108  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| ||| ||||||||| | ||||||||||||||    
T  7049107 aaattttgtagtctttaaacgatatacaaattaattata 7049069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 11020585 - 11020723
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||||||||| |||   ||||||||| ||||||||||||| || |||||  ||||  || ||||||| |||||||| |    
T  11020585 aaaattgaaattttgttccgcgtaagcgtataatcataagtcaaatttagttccctaatcttgtaggcatgactagacaatgataagaaccttcacaacg 11020684  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| ||||||||||||||| ||||||||||||||    
T  11020685 aaattttggagtttttaaacgagatacaaattaattata 11020723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 334 - 393
Target Start/End: Original strand, 29706877 - 29706936
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29706877 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 29706936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 34388636 - 34388774
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  |||||| |||| ||||  ||||||||| |||||||||| || || |||||  | |||||| ||||||| ||||||| ||    
T  34388636 aaaattgaaattttgttccgcgtaagcatatattcacaagtcaaatttagttccctaattttgtaggcatgactggaacatgataagaaccttcacagtg 34388735  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| ||| ||||||||||| ||||||||||||||    
T  34388736 aaattttgtagtctttaaacgagatacaaattaattata 34388774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 406 - 604
Target Start/End: Complemental strand, 36631488 - 36631292
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  36631488 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 36631390  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 604  Q
    | ||||||| |||| ||||| || || |||||  |||||||| |||||||  ||||||||||| ||||| | ||||||||||||| |||| ||||||||    
T  36631389 g-caaatttagttctctaattttgtaggcatgactagaacatgataagaactttcacaatgaaattttgtaatttttaaacgagatacaatttaattat 36631292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 468 - 604
Target Start/End: Complemental strand, 20606235 - 20606099
Alignment:
Q  468 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 567  Q
    |||||| ||||||||||| ||||||| |||||| || | ||||||||||||   ||||  | || ||||||||||||||| ||||||| |||||| ||||    
T  20606235 aaattgcaattttgttccgagtaagcatatactgacggatcaaatttcgttatataattctgtaggcatggttagaacatgataagaaccttcaccatga 20606136  T
Q  568 agttttgcagtttttaaacgagagacaaattaattat 604  Q
    | ||||| |||||||||| |||| |||||||||||||    
T  20606135 aattttgaagtttttaaatgagatacaaattaattat 20606099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 406 - 574
Target Start/End: Original strand, 37001736 - 37001903
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  37001736 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaatgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 37001834  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 574  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| |||||    
T  37001835 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttg 37001903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 8394797 - 8394600
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||| ||| |||||||||||||||  ||||||||||||||||      
T  8394797 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgccaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 8394699  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    |  |||||| |||||||||| || || |||||  |||||||| ||||||| |||||| ||||| ||||| | |||||||| |||| | ||||||||||||    
T  8394698 ga-aaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacgatgaaattttgtaatttttaaatgagatataaattaattata 8394600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 475 - 604
Target Start/End: Original strand, 13072424 - 13072553
Alignment:
Q  475 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 574  Q
    ||||||||||  ||||||||||||||||| |||||||||| |||| ||||| ||  | | ||| |||||| || ||||||| |||||| ||||| |||||    
T  13072424 aattttgttcagagtaagcgtatactcacgggtcaaattttgttctctaattttggaggtatgtttagaatatcataagaaccttcaccatgaaattttg 13072523  T
Q  575 cagtttttaaacgagagacaaattaattat 604  Q
     || |||||||||||| || ||||||||||    
T  13072524 gagattttaaacgagatactaattaattat 13072553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 338 - 392
Target Start/End: Complemental strand, 29701597 - 29701543
Alignment:
Q  338 aggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 392  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  29701597 aggacgaaaacgttacctaaaaataagttataggaccatttgtgtaattttgcct 29701543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 403 - 604
Target Start/End: Complemental strand, 23582642 - 23582442
Alignment:
Q  403 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 502  Q
    ||||||||||| ||||| ||||| |||  ||| ||||||||| |||||  ||| ||||  ||| ||| ||| ||||||||||| |||||| ||||| |||    
T  23582642 tgcaaagttttgtagcaattcaaagacatttctatttattttaatttttcaactaaaacttgctaaa-ttgcaattttgttccgagtaagagtataatca 23582544  T
Q  503 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 602  Q
    | |||||||||| |||  ||||| || || ||||||||||||||| |||| ||  |||||  |||| ||| | |||||||||| |||| |  ||||||||    
T  23582543 cgggtcaaattttgttatctaattttttaggcatggttagaacatcataataacattcaccgtgaaatttggtagtttttaaatgagatatgaattaatt 23582444  T
Q  603 at 604  Q
    ||    
T  23582443 at 23582442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 392 - 483
Target Start/End: Original strand, 8722827 - 8722917
Alignment:
Q  392 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgtt 483  Q
    |||||| |||||||||||||| |||||||||| |  |||||||||||||||||||||||  ||| |||  |||| |||||||||||||||||    
T  8722827 taaaaataatttgcaaagtttcatagcatttcgaatacgattcaatttatttttatttttcaaccaaaccgtgc-aaaattgaaattttgtt 8722917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 453 - 604
Target Start/End: Complemental strand, 20609542 - 20609392
Alignment:
Q  453 aacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataa 552  Q
    |||||||| |||||||| | | |||||| |||| | ||||||||||||||| ||||||||| ||||   ||||  | || ||||||||||||||  ||||    
T  20609542 aacaaaaacgtgcaaaa-tagcaatttttttccgaataagcgtatactcacgggtcaaattccgttatataattctgtaggcatggttagaacaagataa 20609444  T
Q  553 gaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 604  Q
    ||| |||||| ||| | ||||| || ||||||| |||| |||||||||||||    
T  20609443 gaaccttcaccatgcaattttgaagattttaaatgagatacaaattaattat 20609392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 475 - 604
Target Start/End: Complemental strand, 20612010 - 20611881
Alignment:
Q  475 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 574  Q
    |||||| |||| |||||||||||||||||  |||||||| ||||   ||||  | || |||| |||||||||| ||||||| |||||| ||| | |||||    
T  20612010 aatttttttccgagtaagcgtatactcacgcgtcaaattccgttatataattctgtaggcatagttagaacatgataagaaccttcaccatgcaattttg 20611911  T
Q  575 cagtttttaaacgagagacaaattaattat 604  Q
     || ||||||| |||| |||||||||||||    
T  20611910 aagattttaaatgagatacaaattaattat 20611881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 525
Target Start/End: Complemental strand, 36658839 - 36658721
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  36658839 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 36658741  T
Q  506 gtcaaatttcgttccctaat 525  Q
    || ||||||  |||||||||    
T  36658740 gtgaaatttaattccctaat 36658721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 41172215 - 41172266
Alignment:
Q  172 tgtgtgaaccttgtgtgcgtgaggatgccatgaattttgagatttgattttt 223  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  41172215 tgtgtgaaccttgtgtgcgtgaggatgccatggatttcaagatttgattttt 41172266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 31894319 - 31894257
Alignment:
Q  330 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 392  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| |||| |||||||||||||    
T  31894319 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactatttgtgtaattttgcct 31894257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 433 - 592
Target Start/End: Original strand, 12224506 - 12224661
Alignment:
Q  433 tcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataa 532  Q
    |||||| ||||| |||||  ||| |||| |||||||| ||| |||||||||   ||||| | |||||||||  ||||||| ||| |||||||| |||||     
T  12224506 tcaattgattttgatttttcaaccaaaacgtgcaaaa-ttgcaattttgttatgagtaatcatatactcacatgtcaaatgtcgctccctaattttatag 12224604  T
Q  533 gcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagaga 592  Q
    ||||| ||||||||| ||||||   ||||| || || ||||  |||||||||||||||||    
T  12224605 gcatgattagaacatcataaga---ttcaccataaaattttagagtttttaaacgagaga 12224661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 330 - 399
Target Start/End: Complemental strand, 44307672 - 44307603
Alignment:
Q  330 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaaca 399  Q
    |||||||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||| ||||||    
T  44307672 aaaaataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaaca 44307603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 503
Target Start/End: Original strand, 31252295 - 31252394
Alignment:
Q  403 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 502  Q
    |||||||||| ||| ||||||||||| | |||||||||||||||||||  ||  |||| ||||  |||||| ||||||||||| || ||||||||| |||    
T  31252295 tgcaaagtttcataacatttcaatgatgtttcaatttatttttatttttgaatcaaaacgtgc-taaattgcaattttgttccgagcaagcgtatattca 31252393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 392
Target Start/End: Original strand, 31894539 - 31894601
Alignment:
Q  330 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 392  Q
    |||||||||||||||||| |||| |||||| ||||||| ||||| | || |||||||||||||    
T  31894539 aaaaataaaggacgaaaatgttatctaaaattaagttaagggactaattgtgtaattttgcct 31894601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 1511251 - 1511190
Alignment:
Q  330 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 391  Q
    ||||||||||||||||||  |||||||||| ||||||| ||||| | || ||||||||||||    
T  1511251 aaaaataaaggacgaaaatattacctaaaattaagttaagggactaattgtgtaattttgcc 1511190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 1511475 - 1511538
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 397  Q
    |||||||||||||  ||||||||||  ||||||| ||||| | || ||||||||||||||||||    
T  1511475 ataaaggacgaaagtgttacctaaatttaagttaagggactaattgtgtaattttgcctaaaaa 1511538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 393
Target Start/End: Complemental strand, 10878682 - 10878623
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 393  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||||    
T  10878682 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccta 10878623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 536 - 603
Target Start/End: Complemental strand, 32199229 - 32199162
Alignment:
Q  536 tggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatta 603  Q
    |||||| |||||  |||||||||||||  || | ||||  ||||||||||||||||||||||||||||    
T  32199229 tggttataacatcgtaagaatcttcaccgtggaattttatagtttttaaacgagagacaaattaatta 32199162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 538 - 605
Target Start/End: Complemental strand, 45710054 - 45709987
Alignment:
Q  538 gttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    |||||||||| |||||||||||||| ||||| ||||  ||||||| |||||| ||  |||||||||||    
T  45710054 gttagaacattataagaatcttcaccatgaaattttagagtttttgaacgagggaagaattaattata 45709987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 396
Target Start/End: Original strand, 28408529 - 28408591
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 396  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  28408529 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 28408591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 535 - 601
Target Start/End: Original strand, 28837412 - 28837478
Alignment:
Q  535 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaat 601  Q
    |||||||||| || |||| || |||||||||||| ||||  ||||||| ||||||| ||||||||||    
T  28837412 atggttagaatatcataaaaaccttcacaatgaaattttagagttttttaacgagaaacaaattaat 28837478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 557 - 605
Target Start/End: Complemental strand, 36658700 - 36658652
Alignment:
Q  557 cttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| || ||||| ||| ||||||||||| ||||||||||||||    
T  36658700 cttcacaataaaattttgtagtctttaaacgagatacaaattaattata 36658652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 5e-39; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 400 - 605
Target Start/End: Original strand, 41971746 - 41971951
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaac-aaaaaggtgcaaaaattgaaattttgttcctagtaagcgtata 498  Q
    ||||| |||||||||||||||||||| | || || |||||||||| |||||  ||| ||||| |||||||| ||||||||||||||   |||||||||||    
T  41971746 atttgtaaagttttatagcatttcaaagtcgtttaaatttattttgatttttcaaccaaaaacgtgcaaaa-ttgaaattttgttcagcgtaagcgtata 41971844  T
Q  499 ctcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||| ||||||||||  ||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||||||||||||||  | |||||    
T  41971845 ctcacaggtcaaatttaattccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgaggtataaatt 41971944  T
Q  599 aattata 605  Q
    |||||||    
T  41971945 aattata 41971951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 400 - 605
Target Start/End: Complemental strand, 3829659 - 3829456
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||    
T  3829659 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 3829561  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatta 599  Q
    ||||  ||||||||| |||||||||  || || |||||  |||||||| ||||||| ||||||||||||  |||| ||||||||||||||| ||||||||    
T  3829560 tcacaagtcaaatttagttccctaactttgtaggcatgactagaacatgataagaaccttcacaatgaa-atttgtagtttttaaacgagatacaaatta 3829462  T
Q  600 attata 605  Q
    ||||||    
T  3829461 attata 3829456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 11957845 - 11958043
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||||||| |||||||| ||| |||||||||||   |||||||||||||||      
T  11957845 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaacaaaaacgtgcaaaa-ttgcaattttgttccgcataagcgtatactcacaa 11957943  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||   ||| ||||| || || ||||| ||||||||| ||||||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  11957944 gtcaaattcaattcactaattttctaggcatgattagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgagatacaaattaattata 11958043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 35908199 - 35908001
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| |   || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  35908199 aaagtttcatagcatttcgaaatcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 35908101  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  35908100 gtcaaatttagttccctaattttgtatgcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 35908001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 7434033 - 7433895
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| | ||||| ||||||||||    
T  7434033 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatg 7433934  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| | ||||||||||||| ||||||||||||||    
T  7433933 aaattttgtaatttttaaacgagatacaaattaattata 7433895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 17445965 - 17445767
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| ||| |||||| | | || || |||||||||| |||||  ||| ||||  ||||||| |||||||||||||||  ||||||||||||||||      
T  17445965 aaagtttcataacatttcgaagtcgtttaaatttattttgatttttcaaccaaaacttgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 17445867  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| ||||| |||| || || |||||  |||||||| ||||||| ||||| |||||| ||||| ||| ||||||||||| ||||||||||||||    
T  17445866 gtcaaatttagttccttaattttgtaggcatgactagaacatgataagaaccttcataatgaaattttgtagtctttaaacgagatacaaattaattata 17445767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 23313606 - 23313468
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    ||||||||||||||||||   |||||||||||||||   ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  23313606 aaaattgaaattttgttctgcgtaagcgtatactcataagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 23313507  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| | ||||||||||||| ||||||||||||||    
T  23313506 aaattttgtaatttttaaacgagatacaaattaattata 23313468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 42310495 - 42310633
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    ||||||||||||||||| |  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  42310495 aaaattgaaattttgtttcgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 42310594  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| | ||||||||| ||| ||||||||||||||    
T  42310595 aaattttgtaatttttaaactagatacaaattaattata 42310633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 32981551 - 32981749
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||||||| |||||||| |||||||||||||||  |||||| | |||||||      
T  32981551 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaacaaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcatttactcacaa 32981649  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||| ||| || || |||||  |||||||| ||||||| ||||||||| || ||||  | ||||| ||||||| ||||||||||||||    
T  32981650 gtcaaatttagttcccaaattttgtaggcatgactagaacatgataagaaccttcacaataaaattttataatttttcaacgagatacaaattaattata 32981749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 487 - 581
Target Start/End: Complemental strand, 32944499 - 32944405
Alignment:
Q  487 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttt 581  Q
    ||||||| ||||||||||| |||||||| |||||||||| ||||||||||| ||||||||| |||||||  ||||| ||||||||||| ||||||    
T  32944499 agtaagcatatactcactgatcaaattttgttccctaattttataagcatgcttagaacatcataagaacattcaccatgaagttttggagtttt 32944405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 475 - 604
Target Start/End: Original strand, 5715373 - 5715502
Alignment:
Q  475 aattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttg 574  Q
    ||||||||||| ||||||  |||| ||||||||||||||| ||||  |||| || || ||||||||| ||||| ||||||| |||||| || || |||||    
T  5715373 aattttgttccgagtaagtatatattcactggtcaaattttgttctataattttgtaggcatggttaaaacatcataagaaacttcaccataaaattttg 5715472  T
Q  575 cagtttttaaacgagagacaaattaattat 604  Q
     | ||||||||||||| || ||||||||||    
T  5715473 gaatttttaaacgagatacgaattaattat 5715502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 488 - 605
Target Start/End: Complemental strand, 33490296 - 33490179
Alignment:
Q  488 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacg 587  Q
    |||||||||||| | |  ||||||||| |||||||||| || || |||||  |||||||| |||| || |||||||||||| ||||| ||||||||||||    
T  33490296 gtaagcgtatacccgcaagtcaaatttagttccctaattttgtaggcatgactagaacatgataataaccttcacaatgaaattttgtagtttttaaacg 33490197  T
Q  588 agagacaaattaattata 605  Q
    ||| || |||||||||||    
T  33490196 agatacgaattaattata 33490179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 508 - 583
Target Start/End: Original strand, 7350228 - 7350303
Alignment:
Q  508 caaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagttttta 583  Q
    |||||||||||| ||||| || ||||||||||||||| || |||||||||||||| ||||| ||||  ||||||||    
T  7350228 caaatttcgttcactaattttgtaagcatggttagaatatcataagaatcttcaccatgaaattttagagttttta 7350303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 432 - 605
Target Start/End: Complemental strand, 28463582 - 28463421
Alignment:
Q  432 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttata 531  Q
    ||||||||||||| |||||  ||| ||||  ||||||| ||||||||||||||| | ||||||||||||||| ||||||| ||  ||||||||| ||  |    
T  28463582 ttcaatttattttgatttttcaaccaaaacatgcaaaa-ttgaaattttgttccgaataagcgtatactcacaggtcaaaattaattccctaattttgca 28463484  T
Q  532 agcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
     |||||  ||||||           |||||||||||| ||||| ||||||||||||| | ||||||||||||||    
T  28463483 ggcatgactagaac-----------cttcacaatgaaattttgtagtttttaaacgaaatacaaattaattata 28463421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 19832206 - 19832259
Alignment:
Q  170 tgtgtgtgaaccttgtgtgcgtgaggatgccatgaattttgagatttgattttt 223  Q
    ||||||||||||||||||||||||||||||||||  |||  |||||||||||||    
T  19832206 tgtgtgtgaaccttgtgtgcgtgaggatgccatgtctttcaagatttgattttt 19832259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 394
Target Start/End: Original strand, 12115240 - 12115300
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 394  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || |||||||||||||||    
T  12115240 ataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcctaa 12115300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 467 - 562
Target Start/End: Complemental strand, 42412464 - 42412370
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcac 562  Q
    ||||||| ||||||||||| | || |||||||||||| |||||||||||||| ||||||  | ||   ||||||| ||||| ||||||||||||||    
T  42412464 aaaattgcaattttgttccgaata-gcgtatactcacaggtcaaatttcgtttcctaattctgtagatatggttaaaacatcataagaatcttcac 42412370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 561
Target Start/End: Original strand, 18716322 - 18716396
Alignment:
Q  487 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttca 561  Q
    ||||||| |||| |||| ||||||||||  ||||||||| |||||  |||||||||||||| ||||||| |||||    
T  18716322 agtaagcatatattcacgggtcaaattttattccctaattttatagacatggttagaacatcataagaaccttca 18716396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 604
Target Start/End: Complemental strand, 17744802 - 17744599
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||| ||| |||||||||||| ||   ||| |||||||||||||||  | | |||| |||| ||| ||| |||| | |||  ||||||| |||||    
T  17744802 atttgaaaaatttcatagcatttcaaagatttttcgatttatttttattttttagccaaaacgtgcgaaa-ttgcaattctattcagagtaagcatatac 17744704  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatta 599  Q
    | || |||||||||| ||||  |||| || || | ||||||||||||| ||||||| |||||  ||||| ||||| | |||| ||| |||| |  |||||    
T  17744703 tgacgggtcaaattttgttctataattttgtaggaatggttagaacatcataagaaacttcaacatgaaattttggaattttaaaatgagatatgaatta 17744604  T
Q  600 attat 604  Q
    |||||    
T  17744603 attat 17744599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 7113926 - 7113863
Alignment:
Q  330 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 393  Q
    |||||||||||||||||  |||||||||||  |||||| ||||| | || ||||||||||||||    
T  7113926 aaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgccta 7113863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 19897233 - 19897170
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 397  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || | |||||||||| |||||    
T  19897233 ataaaggacgaaaatgttacctaaaattaagttaagggactaattgtataattttgccaaaaaa 19897170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 392
Target Start/End: Original strand, 40290073 - 40290128
Alignment:
Q  337 aaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 392  Q
    ||||||||||| ||||||||||| ||||||| ||||| | || |||||||||||||    
T  40290073 aaggacgaaaatgttacctaaaattaagttaagggactaattatgtaattttgcct 40290128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 396
Target Start/End: Original strand, 17611713 - 17611775
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 396  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  17611713 ataaaggacgaaagtgttacctaaaataaagttaagggactaattatgtaattttgcctaaaa 17611775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 396
Target Start/End: Original strand, 25780173 - 25780239
Alignment:
Q  330 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 396  Q
    |||||||||||||||||  |||||||||||  |||||| ||||| | || ||||||||| |||||||    
T  25780173 aaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttacctaaaa 25780239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 552
Target Start/End: Complemental strand, 3604863 - 3604778
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataa 552  Q
    |||||||  |||||||| | ||||||  ||||||||  ||||||||||  ||||||||| || || ||||||||||||||| ||||    
T  3604863 aaaattgctattttgtttcgagtaagtatatactcaagggtcaaattttattccctaattttgtaggcatggttagaacatcataa 3604778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 3e-37; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 3292392 - 3292590
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | ||||| |||||||| | |||||  ||| |||| ||| |||| |||||||||||||||  ||||||||||||||||      
T  3292392 aaagtttcatagcatttcgaagtcgattaaatttattatgatttttcaaccaaaacgtggaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 3292490  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || ||||| ||||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  3292491 gtcaaatttagttccctaattttgtaggcatgattagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 3292590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 28876810 - 28877008
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||||| | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  |||||| |||||||||      
T  28876810 aaagtttcatagcatttcaaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcttatactcacaa 28876908  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||| ||||||||||| | ||||||||||||    
T  28876909 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtctttaaacgagatagaaattaattata 28877008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 435 - 605
Target Start/End: Original strand, 29995507 - 29995676
Alignment:
Q  435 aatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagc 534  Q
    |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || ||    
T  29995507 aatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttccctaattttgtaggc 29995605  T
Q  535 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    |||  |||||||| ||||||| |||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  29995606 atgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgagatacaaattaattata 29995676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 6236181 - 6235983
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | |  | || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  6236181 aaagtttcatagcatttcgaagtggtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6236083  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  6236082 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 6235983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 10352439 - 10352577
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || ||||| ||||||||| ||||||| ||||||||||    
T  10352439 aaaattgaaattttgttccgtgtaagtgtatactcacaagtcaaatttagttccctaattttgtaggcatgattagaacatgataagaaccttcacaatg 10352538  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| | ||||||||||||| ||||||||||||||    
T  10352539 aaattttgtactttttaaacgagatacaaattaattata 10352577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 6689731 - 6689929
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | ||||| |||||||| | |||||  ||| |||| ||| |||| |||||||||||||||  ||||||||||||||||      
T  6689731 aaagtttcatagcatttcgaagtcgattaaatttattatgatttttcaaccaaaacgtggaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6689829  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    |||||||||  ||||||||| || || ||||| ||||||||| ||||||| ||||||| |||| ||||| ||| |||||||||||  |||||||||||||    
T  6689830 gtcaaatttaattccctaattttgtaggcatgattagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagattcaaattaattata 6689929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 42333270 - 42333468
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  42333270 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 42333368  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  42333369 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 42333468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 33135940 - 33136138
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| ||| |||||||| | || || || ||||||| |||||  ||| |||| |||||||| |||||||||||||||  |||| ||||||||||       
T  33135940 aaagtttcatatcatttcaaagtcgtttaaaattattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaaacgtatactcataa 33136038  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||| | ||||||||||| ||| ||||||||||||||    
T  33136039 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaatttcgtagtttttaaacaagatacaaattaattata 33136138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 35546623 - 35546426
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  35546623 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 35546525  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  || ||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  35546524 gtcaaatttagttccctaat-ttgtaggcatgactaaaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 35546426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 43143080 - 43143278
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || |  |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  43143080 aaagtttcatagcatttcgaagtcgttaaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 43143178  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  43143179 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 43143278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 400 - 605
Target Start/End: Complemental strand, 13012868 - 13012663
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  13012868 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 13012770  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  13012769 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 13012670  T
Q  599 aattata 605  Q
    |||||||    
T  13012669 aattata 13012663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 400 - 605
Target Start/End: Complemental strand, 20129993 - 20129788
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  20129993 atttgtaaagtttcatagcatttcgaaatcgttttaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 20129895  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  20129894 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 20129795  T
Q  599 aattata 605  Q
    |||||||    
T  20129794 aattata 20129788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 400 - 605
Target Start/End: Original strand, 26438766 - 26438971
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  26438766 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 26438864  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  26438865 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 26438964  T
Q  599 aattata 605  Q
    |||||||    
T  26438965 aattata 26438971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 30077191 - 30077329
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||| ||||| ||||  ||||||||| |||||| ||| || || ||||| ||| ||||| ||||||| ||||||||||    
T  30077191 aaaattgaaattttgttccgcgtaagtgtatattcacaagtcaaatttagttcccaaattttgtaggcatgattataacatgataagaaccttcacaatg 30077290  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| ||||||||||||||| ||||||||||||||    
T  30077291 aaattttgtagtttttaaacgagatacaaattaattata 30077329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 400 - 605
Target Start/End: Original strand, 34406771 - 34406976
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  34406771 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 34406869  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  34406870 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 34406969  T
Q  599 aattata 605  Q
    |||||||    
T  34406970 aattata 34406976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 400 - 605
Target Start/End: Complemental strand, 43356584 - 43356379
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  43356584 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 43356486  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  43356485 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 43356386  T
Q  599 aattata 605  Q
    |||||||    
T  43356385 aattata 43356379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 400 - 605
Target Start/End: Complemental strand, 47501453 - 47501248
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  47501453 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 47501355  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  47501354 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 47501255  T
Q  599 aattata 605  Q
    |||||||    
T  47501254 aattata 47501248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 25931381 - 25931183
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  |||||||||| |||||      
T  25931381 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtattctcacaa 25931283  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  || ||||| ||||||| ||||||| | || ||||| | ||||||||||||| ||||||||||||||    
T  25931282 gtcaaatttagttccctaattttgtaggcatgactaaaacatgataagaaccttcacagttaaattttgtaatttttaaacgagatacaaattaattata 25931183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 17510723 - 17510925
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || ||||||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  17510723 aaagtttcatagcatttcgaagtcgtttcaatttattttgatttttgaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 17510821  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttag----aacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaat 601  Q
    ||||||||| |||||||||| || || | |||  |||    ||||| ||||||| |||||||||||| ||||  | ||||||||||||| ||||||||||    
T  17510822 gtcaaatttagttccctaattttgtaggtatgactagaacaaacatgataagaaccttcacaatgaaattttataatttttaaacgagatacaaattaat 17510921  T
Q  602 tata 605  Q
    ||||    
T  17510922 tata 17510925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 400 - 605
Target Start/End: Original strand, 36381836 - 36382039
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||| ||||  ||||||||||||    
T  36381836 atttgtaaagtttcatagcatttcgaattcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttattccgcgtaagcgtatac 36381934  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaatta 599  Q
    ||||  | ||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||| || ||||| | ||||||||||||| ||||||||    
T  36381935 tcacaag-caaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaataaaattttgtaatttttaaacgagatacaaatta 36382033  T
Q  600 attata 605  Q
    ||||||    
T  36382034 attata 36382039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 406 - 601
Target Start/End: Complemental strand, 48990000 - 48989806
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||  | | || || |||||||||| |||||  ||| |||| |||| ||| |||||||||||||||  |||||||||||| |||      
T  48990000 aaagtttcatagcattttgaagtcgtttaaatttattttgatttttcaaccaaaacgtgccaaa-ttgaaattttgttccgcgtaagcgtatacccacaa 48989902  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaat 601  Q
    |||||||||  ||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||  ||||||||||||||| ||||||||||    
T  48989901 gtcaaatttaattccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttttagtttttaaacgagatacaaattaat 48989806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 432 - 602
Target Start/End: Original strand, 29134152 - 29134321
Alignment:
Q  432 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttata 531  Q
    |||||||||||||||||||  ||| |||| ||   ||||||||||||||||||||||||   |||||||||  |||||||||| |||| ||||| || ||    
T  29134152 ttcaatttatttttatttttcaaccaaaacgt-ttaaaattgaaattttgttcctagtatttgtatactcataggtcaaattttgttctctaattttgta 29134250  T
Q  532 agcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 602  Q
     ||| | |||||||||||||||||  ||||||||||| |||||| |||| |||||| || | |||||||||    
T  29134251 ggcaagattagaacataataagaaatttcacaatgaaattttgctgtttataaacgtgacaaaaattaatt 29134321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 438 - 605
Target Start/End: Complemental strand, 48130617 - 48130451
Alignment:
Q  438 ttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatg 537  Q
    ||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||  |||||| || |||||||||| || || |||      
T  48130617 ttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaagtcaaaattagttccctaattttgtaggcaat 48130519  T
Q  538 gttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
      |||||||| ||||||| ||||||||| || | ||| ||||||||||||| | ||||||||||||||    
T  48130518 actagaacatgataagaaccttcacaataaaatattgtagtttttaaacgacatacaaattaattata 48130451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 30110634 - 30110436
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | |  || |||||||||| |||||  ||| |||| |||||||| |||||||||| |||   ||||||| |||||||| |    
T  30110634 aaagtttcatagcatttcgaagtcatttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttattctgcgtaagcgcatactcacag 30110536  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| ||||| |||| || || |||||   | ||||| |||| ||  ||||||||||| ||||| ||||||||||||||| |||||||| |||||    
T  30110535 gtcaaatttagttccttaattttgtaggcatgacaataacatgataataacattcacaatgaaattttgtagtttttaaacgagatacaaattagttata 30110436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 30216301 - 30216437
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||  || ||    
T  30216301 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaacctt--cagtg 30216398  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| ||| |||||| |||| |||| |||||||||    
T  30216399 aaattttgtagtctttaaatgagatacaagttaattata 30216437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 468 - 604
Target Start/End: Original strand, 26546856 - 26546992
Alignment:
Q  468 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 567  Q
    |||||| ||||||||||  ||||||||||||||||| ||||||||| ||||| ||||| || || |||| |||||||||| |||||||  || || ||||    
T  26546856 aaattgcaattttgttctgagtaagcgtatactcacgggtcaaattccgttctctaattttgtaggcattgttagaacatcataagaacatttaccatga 26546955  T
Q  568 agttttgcagtttttaaacgagagacaaattaattat 604  Q
    | ||||  |||||||||| ||   |||||||||||||    
T  26546956 aattttagagtttttaaaagacgtacaaattaattat 26546992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 405 - 604
Target Start/End: Original strand, 13502113 - 13502310
Alignment:
Q  405 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 504  Q
    |||||||| |||||||||||| || | || |||||| |||  |||| || ||||| | ||||||| ||| ||||||||||| ||||||| ||||| ||      
T  13502113 caaagtttcatagcatttcaaagatgttttaatttactttatttttcaatcaaaacg-tgcaaaa-ttgcaattttgttccaagtaagcatatacacatg 13502210  T
Q  505 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 604  Q
    | ||||||||| ||||||||| || || ||||| | ||||||| |||||||  | ||| ||||| ||||| |||||||||| |||||||  |||||||||    
T  13502211 gatcaaatttccttccctaattttgtaggcatgctcagaacatcataagaacttacaccatgaaattttggagtttttaaatgagagacggattaattat 13502310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 495 - 605
Target Start/End: Complemental strand, 40529600 - 40529490
Alignment:
Q  495 tatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagaca 594  Q
    |||||||||  ||||||||| ||||| |||| || || |||||  |||||||| |||| || |||||||||||| ||||| | ||||||||| ||| |||    
T  40529600 tatactcacaagtcaaatttagttccataattttgtaggcatgactagaacatgataaaaaccttcacaatgaaattttgtaatttttaaacaagataca 40529501  T
Q  595 aattaattata 605  Q
    |||||||||||    
T  40529500 aattaattata 40529490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 540 - 605
Target Start/End: Original strand, 13394870 - 13394935
Alignment:
Q  540 tagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    |||||||| ||||||| |||||||||||| ||||| ||| ||||||||||| ||||||||||||||    
T  13394870 tagaacatgataagaaccttcacaatgaaattttgtagtctttaaacgagatacaaattaattata 13394935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 432 - 604
Target Start/End: Complemental strand, 56225950 - 56225778
Alignment:
Q  432 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaatttt-gttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttat 530  Q
    |||||||||||||||||||  ||| |||| |||||||| ||| |||||| ||| |  |||| | ||||||||  |||||||||||||||| |||| || |    
T  56225950 ttcaatttatttttatttttcaaccaaaacgtgcaaaa-ttgcaattttcgtttcgggtaaacatatactcatgggtcaaatttcgttccataattttgt 56225852  T
Q  531 aagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 604  Q
    | ||||||||||||||| | ||||| |||||| |     ||||  |||||||||| ||||||||| ||||||||    
T  56225851 aggcatggttagaacatcacaagaaccttcaccaaatttttttatagtttttaaatgagagacaatttaattat 56225778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 469 - 604
Target Start/End: Original strand, 4038262 - 4038397
Alignment:
Q  469 aattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaa 568  Q
    ||||| ||||||||||| ||||| | ||||||||| |||| |||||||||| ||||| || || | ||||||  ||| | |||||||  ||||| |||||    
T  4038262 aattgcaattttgttccgagtaaacctatactcacaggtctaatttcgttctctaattttgtaggtatggttttaacttcataagaactttcaccatgaa 4038361  T
Q  569 gttttgcagtttttaaacgagagacaaattaattat 604  Q
     ||||| || |||||||||||| | |||||| ||||    
T  4038362 attttggaggttttaaacgagatataaattagttat 4038397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 525
Target Start/End: Original strand, 13390943 - 13391061
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || ||||| |||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||| ||      
T  13390943 aaagtttcatagcatttcgaagtcgtttaaatttcttttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactaacaa 13391041  T
Q  506 gtcaaatttcgttccctaat 525  Q
    ||||||||| ||||||||||    
T  13391042 gtcaaatttagttccctaat 13391061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 21360514 - 21360451
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 397  Q
    ||||||||| |||||||||||||||| ||||||| ||||| |||| |||||||||||| |||||    
T  21360514 ataaaggactaaaacgttacctaaaattaagttaagggactatttatgtaattttgccaaaaaa 21360451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 397
Target Start/End: Original strand, 30055488 - 30055555
Alignment:
Q  330 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 397  Q
    ||||| |||||||||||| ||||||||||| ||||||| ||||| | || ||||||||||||||||||    
T  30055488 aaaaaaaaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcctaaaaa 30055555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 411 - 585
Target Start/End: Original strand, 49062453 - 49062626
Alignment:
Q  411 tttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaa 510  Q
    ||||||||||||| | ||||  |||||||||||| |||||  ||| |||| |||| ||||||| ||||| ||||| ||| | ||||||||||| ||||||    
T  49062453 tttatagcatttcgaagacgcctcaatttattttgatttttcaactaaaatgtgc-aaaattgcaatttcgttccaagtgatcgtatactcacaggtcaa 49062551  T
Q  511 atttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaa 585  Q
     ||||| || ||| | ||  | ||| |||||||| || ||| ||| |||||| ||||| ||||  ||||||||||    
T  49062552 ttttcgctcactagttttgaaggcaaggttagaatattatatgaaccttcaccatgaaattttagagtttttaaa 49062626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 540 - 605
Target Start/End: Complemental strand, 1818256 - 1818191
Alignment:
Q  540 tagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    |||||||| || |||| |||||||||||| ||||| |||||| |||||||| ||||||||||||||    
T  1818256 tagaacatgattagaaccttcacaatgaaattttgtagttttcaaacgagatacaaattaattata 1818191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 419 - 604
Target Start/End: Complemental strand, 31853885 - 31853701
Alignment:
Q  419 atttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgtt 518  Q
    ||||||| |||| ||| ||||||||| |||||  ||| ||||  ||| ||| ||| |||||||| |  |||||| |||||||||| ||||||||| ||||    
T  31853885 atttcaaagacgtttctatttattttaatttttcaaccaaaacatgcgaaa-ttgcaattttgtactgagtaagtgtatactcacgggtcaaattacgtt 31853787  T
Q  519 ccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 604  Q
       |||| || || ||||||||||||| | ||||||| |||||| || ||  |||| ||| ||||| ||| | |||||||||||||    
T  31853786 ttttaattttgtaggcatggttagaacgtcataagaaccttcaccataaaaatttggagtgtttaaccgaaatacaaattaattat 31853701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 50204643 - 50204771
Alignment:
Q  467 aaaattgaaatttt-gttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaat 565  Q
    |||||||||||||| |||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||           ||||||| |||||||||    
T  50204643 aaaattgaaatttttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatg-----------ataagaaccttcacaat 50204731  T
Q  566 gaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||| ||||| ||| ||||||||||| | ||||||||||||    
T  50204732 gaaattttgtagtctttaaacgagatataaattaattata 50204771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 468 - 604
Target Start/End: Complemental strand, 9415509 - 9415373
Alignment:
Q  468 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 567  Q
    |||||| ||||||||| | |||||||||||||| ||  |||||||| ||||| ||||| || ||  |||||| |||| || |||| || |||| | || |    
T  9415509 aaattgcaattttgtttcgagtaagcgtatacttacgagtcaaattccgttctctaattttttagacatggtcagaatatcataaaaaccttcgccataa 9415410  T
Q  568 agttttgcagtttttaaacgagagacaaattaattat 604  Q
    | |||||  |||||||||||||| ||||||| |||||    
T  9415409 aattttggggtttttaaacgagatacaaatttattat 9415373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 520
Target Start/End: Complemental strand, 44157295 - 44157182
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||| ||||  ||||||| |||||||||| ||||  ||||||||||||||||      
T  44157295 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacatgcaaaa-ttgaaattttattccgcgtaagcgtatactcacaa 44157197  T
Q  506 gtcaaatttcgttcc 520  Q
    ||||||||| |||||    
T  44157196 gtcaaatttagttcc 44157182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 543 - 604
Target Start/End: Complemental strand, 29094683 - 29094622
Alignment:
Q  543 aacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 604  Q
    ||||| ||||||| |||||| ||||| ||||| ||||||||||||||| || ||||||||||    
T  29094683 aacatcataagaaccttcaccatgaaattttgaagtttttaaacgagatacgaattaattat 29094622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 390
Target Start/End: Original strand, 30799612 - 30799668
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgc 390  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || |||||||||||    
T  30799612 ataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgc 30799668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 549 - 604
Target Start/End: Complemental strand, 5290970 - 5290915
Alignment:
Q  549 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 604  Q
    ||||||| |||||||||||| ||||| ||||||||||||| | ||||||| |||||    
T  5290970 ataagaaccttcacaatgaaattttggagtttttaaacgataaacaaatttattat 5290915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 21360851 - 21360788
Alignment:
Q  24 accacaaagttcctacaaccccaaaatttccttcctctattaggacccattttcgtcactgttc 87  Q
    |||||| | |||||||||| ||||||||| ||| ||||||  ||||||||||| ||||||||||    
T  21360851 accacacaattcctacaacaccaaaattttctttctctatagggacccatttttgtcactgttc 21360788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 503
Target Start/End: Complemental strand, 26449393 - 26449291
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| | | || || ||||||||||  ||||  ||  |||| |||||||| |||||||||||||||  ||||||||||||    
T  26449393 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgttttttcaatcaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 26449295  T
Q  500 tcac 503  Q
    ||||    
T  26449294 tcac 26449291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 37872824 - 37872761
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 397  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||| |||||    
T  37872824 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgccaaaaaa 37872761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 467 - 514
Target Start/End: Complemental strand, 40529698 - 40529651
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaattt 514  Q
    |||||||||||||||||||  ||||||||||||||||  |||||||||    
T  40529698 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaattt 40529651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 397
Target Start/End: Original strand, 46143555 - 46143622
Alignment:
Q  330 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 397  Q
    |||||||||||||||||  |||||||||||  |||||| || || | || ||||||||||||||||||    
T  46143555 aaaaataaaggacgaaagtgttacctaaaataaagttaaggcactaattgtgtaattttgcctaaaaa 46143622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 396
Target Start/End: Original strand, 13294891 - 13294953
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 396  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  13294891 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 13294953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 392
Target Start/End: Complemental strand, 25297737 - 25297679
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 392  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || |||||||||||||    
T  25297737 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 25297679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 30055268 - 30055208
Alignment:
Q  331 aaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 391  Q
    |||||||||||| |||  ||||||||||| ||||||| ||||| | || ||||||||||||    
T  30055268 aaaataaaggacaaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 30055208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 42856865 - 42856801
Alignment:
Q  330 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 394  Q
    |||||||||||||||||  |||||||||||  || ||| ||||| | || |||||||||||||||    
T  42856865 aaaaataaaggacgaaagtgttacctaaaataaaattaagggactaattgtgtaattttgcctaa 42856801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 8e-35; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 15959441 - 15959639
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||||| |  | || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||   ||||||||||||||| |    
T  15959441 aaagtttcatagcatttcaaagttgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcataagcgtatactcacag 15959539  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||| ||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||||||||||||||   |||||||||||||    
T  15959540 gtcaaatttagttcccaaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaacgagctgcaaattaattata 15959639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 23034586 - 23034448
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||| |||| |||| || || ||||| ||| |||||||||||||  ||||||||     
T  23034586 aaaattaaaattttgttcctagtaagcgtatactcacaggtcaaatttcattccttaattttgtaggcatgattataacataataagaactttcacaatt 23034487  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||  |||||| |||||||||||||||||||||||    
T  23034486 aaattttatagttttaaaacgagagacaaattaattata 23034448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 13818650 - 13818452
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  ||   ||| |||||||| ||||| |||||||||  ||||||||||||||||      
T  13818650 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaattgaaacgtgcaaaa-ttgaagttttgttccgcgtaagcgtatactcacaa 13818552  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  13818551 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 13818452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 31681038 - 31680840
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  31681038 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 31680940  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| || |||| ||||| ||| ||||||||||| ||||||||||||||    
T  31680939 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcgcagtgaaattttgtagtctttaaacgagatacaaattaattata 31680840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 33430992 - 33430794
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  33430992 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 33430894  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| || |||| ||||| ||| ||||||||||| ||||||||||||||    
T  33430893 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcgcagtgaaattttgtagtctttaaacgagatacaaattaattata 33430794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 468 - 605
Target Start/End: Complemental strand, 192517 - 192380
Alignment:
Q  468 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 567  Q
    |||||||||||||||||| ||||| ||||||||||  |||||||||| |||||||||| ||||| |||||   ||||||| ||||||| ||| |||||||    
T  192517 aaattgaaattttgttccgagtaaacgtatactcataggtcaaatttagttccctaattttataggcatgacgagaacatgataagaaccttaacaatga 192418  T
Q  568 agttttgcagtttttaaacgagagacaaattaattata 605  Q
    | ||||| |||||||||| |||| ||||||||||||||    
T  192417 aattttgtagtttttaaatgagatacaaattaattata 192380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 39657022 - 39657223
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcac-- 503  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  39657022 aaagtttcatagcatttcgaagtcgtttaaatttattttgattttttaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 39657120  T
Q  504 -tggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 602  Q
     || |||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| |||||||||||    
T  39657121 gtgatcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaatt 39657220  T
Q  603 ata 605  Q
    |||    
T  39657221 ata 39657223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 31501214 - 31501412
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | |  | || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  31501214 aaagtttcatagcatttcgaagttgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 31501312  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| | |||||||||| || || ||| ||||||| ||| ||||||||||||||    
T  31501313 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccatcacaatgaaattatgtagtctttaaacaagatacaaattaattata 31501412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 400 - 605
Target Start/End: Original strand, 26282805 - 26283010
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  26282805 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 26282903  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  26282904 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 26283003  T
Q  599 aattata 605  Q
    |||||||    
T  26283004 aattata 26283010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 31272018 - 31271880
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||||| ||| ||||||||||  |||||| || |||| ||||| |  ||  ||||| |||||||||||||||| ||||| |||     
T  31272018 aaaattgaaattttgttcctagcaagtgtatactcacaagtcaaaatttgttcactaatttggtagccatggctagaacataataagaaccttcagaata 31271919  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  31271918 aagtttttcagttttgaaacgagagacaaattaattata 31271880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 400 - 605
Target Start/End: Original strand, 36293108 - 36293313
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  36293108 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 36293206  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataag-aatcttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| ||| |||||| || || |||||  |||||||| ||||| || |||||||||||| ||||| |  |||||||||||| |||||||    
T  36293207 tcacaagtcaaatttagtttcctaattttgtaggcatgactagaacatgataagaaaccttcacaatgaaattttgtaaattttaaacgagatacaaatt 36293306  T
Q  599 aattata 605  Q
    |||||||    
T  36293307 aattata 36293313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 16333395 - 16333593
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  16333395 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 16333493  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || ||||||||  || || || ||||||| |||| ||||||| ||||| | ||||||||| ||| ||||||||||||||    
T  16333494 gtcaaatttagttccctaattttgtaagcatgactaaaatatgataagaaccttcccaatgaaattttgtaatttttaaacaagatacaaattaattata 16333593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 36291982 - 36291844
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||| |||||||||   ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||     
T  36291982 aaaattgaaattttgttccgcgtaagtgtatactcataagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaata 36291883  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||  ||||||||||||||| ||||||||||||||    
T  36291882 aaattttatagtttttaaacgagatacaaattaattata 36291844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 37255216 - 37255078
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||  | ||    
T  37255216 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttccgagtg 37255117  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| ||| ||||||||||| ||||||||||||||    
T  37255116 aaattttgtagtctttaaacgagatacaaattaattata 37255078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 43069468 - 43069330
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| ||  |  ||||  |||||||| ||||||| ||||| ||||    
T  43069468 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttccctaattttgcagacatgactagaacatgataagaaccttcaaaatg 43069369  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| ||||||||||||||| ||||||||||||||    
T  43069368 aaattttgtagtttttaaacgagatacaaattaattata 43069330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 1775871 - 1776068
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  1775871 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactcaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 1775969  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    | |||||||  ||| ||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| ||| ||||||||||    
T  1775970 g-caaatttaattctctaattttttaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacagattaattata 1776068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 17332115 - 17332313
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||  | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  |||||| ||||||| |      
T  17332115 aaagtttcatagcattttgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcatatactcgcaa 17332213  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| ||||| |||| || || |||||  |||||||| ||||||| |||||||||||| ||||| ||| ||||||| ||| ||||||||||||||    
T  17332214 gtcaaatttagttccttaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtctttaaacaagatacaaattaattata 17332313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 487 - 605
Target Start/End: Complemental strand, 10034495 - 10034377
Alignment:
Q  487 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaac 586  Q
    |||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||  | |||||||||    
T  10034495 agtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttataatttttaaac 10034396  T
Q  587 gagagacaaattaattata 605  Q
    |||| ||||||||||||||    
T  10034395 gagatacaaattaattata 10034377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 12278412 - 12278550
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||| ||||||||||||  ||||||| ||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| ||    
T  12278412 aaaattaaaattttgttccgcgtaagcgaatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtg 12278511  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| | | ||||||||||| ||||||||||||||    
T  12278512 aaattttgtaatctttaaacgagatacaaattaattata 12278550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 434 - 605
Target Start/End: Original strand, 38268944 - 38269103
Alignment:
Q  434 caatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataag 533  Q
    ||||||||||| |||||  ||| |||| |||||||| ||||||||||||||| |||||||||||||| || |||||||||| |||||||||| || || |    
T  38268944 caatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgagtaagcgtatacttacaggtcaaatttagttccctaattttgtagg 38269042  T
Q  534 catggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||           ||||||| |||||||||||| ||||| |||||||| |||||| ||||||||||||||    
T  38269043 catg-----------ataagaaccttcacaatgaaattttgtagtttttatacgagatacaaattaattata 38269103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 400 - 605
Target Start/End: Complemental strand, 39435376 - 39435171
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  |||  ||||||| |||||||||||||||  |||||| |||||    
T  39435376 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacatgcaaaa-ttgaaattttgttccgcgtaagcttatac 39435278  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataag-aatcttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
     |||  ||||||||| |||||||||| || || | |||  |||||||| ||||| || |||||||||||| ||||| |  |||||||||||| |||||||    
T  39435277 ccacaagtcaaatttagttccctaattttgtaggtatgactagaacatgataagaaaccttcacaatgaaattttgtaaattttaaacgagatacaaatt 39435178  T
Q  599 aattata 605  Q
    |||||||    
T  39435177 aattata 39435171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 403 - 601
Target Start/End: Complemental strand, 24793096 - 24792894
Alignment:
Q  403 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 502  Q
    ||||||||||| ||| |||| || |||  |||| ||||||||||||||  || ||||| |||| ||| ||| ||||||||||| ||||| |||||| ||     
T  24793096 tgcaaagttttgtaggattttaaagacatttcattttatttttatttttcaagaaaaatgtgcgaaa-ttggaattttgttccgagtaaacgtatattcg 24792998  T
Q  503 ctggtcaaatttcgttccctaatcttat-----aagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaat 597  Q
      ||||||||| || || || || ||||     | ||||||||||||||| ||||||| |||||| ||||| ||||| |||||||||||||||  |||||    
T  24792997 tgggtcaaattccgctctcttattttattttataggcatggttagaacattataagaaccttcaccatgaaattttggagtttttaaacgagatgcaaat 24792898  T
Q  598 taat 601  Q
    ||||    
T  24792897 taat 24792894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 467 - 601
Target Start/End: Complemental strand, 27750846 - 27750712
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    ||||||| |||||| |||| ||||||| ||||||||  ||||||||||  |||||||||  | ||  |||||||||||||| |||| ||  ||||| | |    
T  27750846 aaaattgcaattttcttccgagtaagcatatactcatgggtcaaatttaattccctaattgtgtagccatggttagaacatcataaaaacattcaccaag 27750747  T
Q  567 aagttttgcagtttttaaacgagagacaaattaat 601  Q
    || ||||| |||||||||||||| |||||||||||    
T  27750746 aaattttgtagtttttaaacgagcgacaaattaat 27750712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 392 - 605
Target Start/End: Complemental strand, 16155683 - 16155472
Alignment:
Q  392 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgtt-cctagta 490  Q
    ||||||| || || ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| ||||| |||| || ||  ||     
T  16155683 taaaaacgatctgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaatttttttttccgtgtg 16155585  T
Q  491 agcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgaga 590  Q
    |||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||| |  ||||  | |||||||||  ||    
T  16155584 agcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaataatattttataatttttaaac--ga 16155487  T
Q  591 gacaaattaattata 605  Q
    |||||||||||||||    
T  16155486 gacaaattaattata 16155472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 488 - 567
Target Start/End: Complemental strand, 28801791 - 28801712
Alignment:
Q  488 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 567  Q
    ||||||||||||||||  ||||||||| |||||||||| || ||||||||  |||||||| ||||||| |||||||||||    
T  28801791 gtaagcgtatactcacaagtcaaatttagttccctaattttgtaagcatgactagaacatgataagaaccttcacaatga 28801712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 467 - 604
Target Start/End: Original strand, 18266162 - 18266303
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatgg----ttagaacataataagaatcttcac 562  Q
    ||||||| ||||||| ||  ||||||| |||| |||| |||||||||||  |||| ||| || || ||||||    |||||| || ||||||| ||||||    
T  18266162 aaaattgcaattttgctctgagtaagcatatagtcacaggtcaaatttcactcccaaattttgtaggcatggtcgattagaatatcataagaaccttcac 18266261  T
Q  563 aatgaagttttgcagtttttaaacgagagacaaattaattat 604  Q
     ||| | ||||| |||||||||| |||||||||| |||||||    
T  18266262 catggaattttgaagtttttaaatgagagacaaactaattat 18266303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 24868008 - 24867935
Alignment:
Q  10 atgtatgaatactcaccacaaagttcctacaaccccaaaatttccttcc---tctattaggacccattttcgtca 81  Q
    |||||||||||| ||||||||| ||||| |||| |||||||||||||||   |||||| ||||||||||||||||    
T  24868008 atgtatgaatacccaccacaaatttcct-caacaccaaaatttccttcctggtctattgggacccattttcgtca 24867935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 432 - 550
Target Start/End: Original strand, 30297492 - 30297606
Alignment:
Q  432 ttcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttata 531  Q
    |||||||||||||| ||||  ||| |||| |||||||| ||||||||||||| ||| ||||||   ||||||  |||||||||  ||||||||| || ||    
T  30297492 ttcaatttatttttgttttccaactaaaacgtgcaaaa-ttgaaattttgtttctattaagcg---actcacatgtcaaattttattccctaattttgta 30297587  T
Q  532 agcatggttagaacataat 550  Q
     ||||||| ||||||||||    
T  30297588 ggcatggtcagaacataat 30297606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 402
Target Start/End: Original strand, 35362206 - 35362274
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaacaatt 402  Q
    ||||||||||||| |||||||||||| ||||||| ||||| | || ||||||||||||| |||| ||||    
T  35362206 ataaaggacgaaagcgttacctaaaattaagttaagggactaattgtgtaattttgccttaaaagaatt 35362274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 510 - 604
Target Start/End: Original strand, 11779160 - 11779254
Alignment:
Q  510 aatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 604  Q
    |||||||||| | ||| ||||| ||||||||| ||||| |||| |  |||||  || || ||||| |||||||||||||| ||||||||||||||    
T  11779160 aatttcgttcgccaattttataggcatggttaaaacatcataaaagccttcatcataaacttttggagtttttaaacgagcgacaaattaattat 11779254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 563 - 605
Target Start/End: Original strand, 30297604 - 30297646
Alignment:
Q  563 aatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    |||||| |||| |||||||||||||||||||||||||||||||    
T  30297604 aatgaattttttcagtttttaaacgagagacaaattaattata 30297646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 334 - 391
Target Start/End: Complemental strand, 27843080 - 27843023
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 391  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | || ||||||||||||    
T  27843080 ataaaggacgaaaatgttacctaaaattaagttaagggactaattatgtaattttgcc 27843023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 562
Target Start/End: Complemental strand, 8788452 - 8788334
Alignment:
Q  443 tttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttag 542  Q
    |||||||| |||| |||| |||||||| | | ||||||||| | ||||||||||| ||||   |||||||| | ||| | ||| || || ||||||||||    
T  8788452 tttatttttaaaccaaaatgtgcaaaa-tggcaattttgtttcgagtaagcgtattctcataagtcaaattccattctccaattttgtaggcatggttag 8788354  T
Q  543 aacataataagaatcttcac 562  Q
    ||||| ||||||| ||||||    
T  8788353 aacatcataagaaacttcac 8788334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 393
Target Start/End: Original strand, 15179078 - 15179137
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 393  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||||    
T  15179078 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccta 15179137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 549 - 604
Target Start/End: Complemental strand, 20368573 - 20368518
Alignment:
Q  549 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 604  Q
    ||||||| |||||||||||| ||||| ||||||||||||| | ||||||| |||||    
T  20368573 ataagaaccttcacaatgaaattttggagtttttaaacgataaacaaatttattat 20368518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 393
Target Start/End: Original strand, 32994443 - 32994502
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 393  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||||    
T  32994443 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgccta 32994502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 392
Target Start/End: Original strand, 32458075 - 32458133
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 392  Q
    |||||||| ||||| ||||||||||| ||||||| ||||| | || |||||||||||||    
T  32458075 ataaaggatgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcct 32458133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 396
Target Start/End: Original strand, 35363278 - 35363340
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 396  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||||    
T  35363278 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaa 35363340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 590
Target Start/End: Complemental strand, 1050650 - 1050565
Alignment:
Q  505 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgaga 590  Q
    ||||||||||||||||||||| || |||| || ||||||||   |||||||  ||||| || || ||||  |||||||||||||||    
T  1050650 ggtcaaatttcgttccctaattttgtaagaatagttagaactacataagaacattcaccataaaattttagagtttttaaacgaga 1050565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 391
Target Start/End: Original strand, 19558161 - 19558218
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 391  Q
    |||||||||||||  ||||||||||| ||||||| ||||| | || ||||||||||||    
T  19558161 ataaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcc 19558218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 533 - 605
Target Start/End: Complemental strand, 23034351 - 23034279
Alignment:
Q  533 gcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||  || |||||||||| ||||| ||| || ||||  ||||||||||  ||||||||||||||||||    
T  23034351 gcatggttgtaatataataagaaccttcaaaattaaattttatagtttttaaataagagacaaattaattata 23034279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 8e-35; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 6930389 - 6930587
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  6930389 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6930487  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||| ||| ||||| ||| ||||||||||| ||||||||||||||    
T  6930488 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaaggaaattttgtagtctttaaacgagatacaaattaattata 6930587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 40081235 - 40081433
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  40081235 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 40081333  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||  | ||||||||||||| ||||||||||||||    
T  40081334 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttataatttttaaacgagatacaaattaattata 40081433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 435 - 603
Target Start/End: Complemental strand, 27935818 - 27935652
Alignment:
Q  435 aatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagc 534  Q
    |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || ||    
T  27935818 aatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttccctaattttgtaggc 27935720  T
Q  535 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatta 603  Q
    |||  |||||||| |||||||||||||||||||| ||||| |||||||||||| || ||||||||||||    
T  27935719 atgactagaacattataagaatcttcacaatgaaattttgtagtttttaaacg-gatacaaattaatta 27935652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 400 - 605
Target Start/End: Original strand, 6268913 - 6269118
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  6268913 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 6269011  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  6269012 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 6269111  T
Q  599 aattata 605  Q
    |||||||    
T  6269112 aattata 6269118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 19565056 - 19565194
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||| ||||| || || ||||| ||||||||| ||||||| ||||||||||    
T  19565056 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttctctaattttgtaggcatgattagaacatgataagaaccttcacaatg 19565155  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| |||||||||| |||| ||||||||||||||    
T  19565156 aaattttgtagtttttaaatgagatacaaattaattata 19565194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 400 - 605
Target Start/End: Original strand, 22967931 - 22968136
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  22967931 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 22968029  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  22968030 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 22968129  T
Q  599 aattata 605  Q
    |||||||    
T  22968130 aattata 22968136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 5135959 - 5135761
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | |  || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  5135959 aaagtttcatagcatttcgaagtcatttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 5135861  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||| | |  || |||||  || ||||| ||||||| |||||||||||| ||||| |||||||||| |||| ||||||||||||||    
T  5135860 gtcaaatttagttccctattttcgtaggcatgactataacatgataagaaccttcacaatgaaattttgtagtttttaaatgagatacaaattaattata 5135761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 403 - 514
Target Start/End: Complemental strand, 8257517 - 8257407
Alignment:
Q  403 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 502  Q
    |||||||||| |||||||||||| |||| |||||||||||||||||||  ||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  8257517 tgcaaagtttcatagcatttcaaagacgtttcaatttatttttatttttcaaccaaaacgtgcaaaa-ttgaaattttgttcctagtaagcgtatactca 8257419  T
Q  503 ctggtcaaattt 514  Q
    | | ||||||||    
T  8257418 cagatcaaattt 8257407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 45183651 - 45183454
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  45183651 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 45183553  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  || ||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  45183552 gtcaaatttagttccctaat-ttgtaggcatgactaaaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 45183454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 45336485 - 45336347
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||| ||| || || ||||| ||||||||| ||||||| ||| ||||||    
T  45336485 aaaattgaaattttgttccgcgtaagtgtatactcacaagtcaaatttagttcccaaattttgtaggcatgattagaacatgataagaacctttacaatg 45336386  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| |||||||||| |||| ||||||||||||||    
T  45336385 aaattttgtagtttttaaatgagatacaaattaattata 45336347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 406 - 601
Target Start/End: Original strand, 11017765 - 11017959
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||| ||      
T  11017765 aaagtttcatagcatttcgaagtcgtttaaatttattatgattttttaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatacttacaa 11017863  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaat 601  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||    
T  11017864 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaat 11017959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 436 - 605
Target Start/End: Original strand, 29564674 - 29564846
Alignment:
Q  436 atttatttttattttaaaac-aaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatt---tc--gttccctaatctta 529  Q
    |||||||||||||||  ||| ||||| |||||||| || ||||||||||||||||||||||||||||||  ||||||||   ||  ||||| |||| ||     
T  29564674 atttatttttatttttcaaccaaaaacgtgcaaaattt-aaattttgttcctagtaagcgtatactcacatgtcaaattaaatcatgttccttaattttg 29564772  T
Q  530 taagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||||||||||||||||||||| |||||||||||| ||||  ||||||||||   |||||||||||||||||    
T  29564773 taggcatggttagaacataataagaaccttcacaatgaaattttatagtttttaaa--tgagacaaattaattata 29564846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 400 - 605
Target Start/End: Complemental strand, 39772470 - 39772265
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  39772470 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 39772372  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataa-gaatcttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| |||| |||  ||||||||||| ||||| |  |||||||||||| |||||||    
T  39772371 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataaggaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 39772272  T
Q  599 aattata 605  Q
    |||||||    
T  39772271 aattata 39772265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 6503065 - 6503263
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| ||| |||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  6503065 aaagtttcatatcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 6503163  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  ||||  || ||||||| ||||||| |||| ||| | ||| ||||||||||| ||||||||||||||    
T  6503164 gtcaaatttagttccctaattttgtaggcatgactagagtatgataagaaccttcacagtgaaatttcgtagtctttaaacgagatacaaattaattata 6503263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 19390760 - 19390621
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataag-aatcttcacaat 565  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| ||| |||||| || || |||||  |||||||| ||||| || |||||||||    
T  19390760 aaaattgaaattttgttccgcgtaagcgtatactcaccagtcaaatttagtttcctaattttgtaggcatgactagaacatgataagaaaccttcacaat 19390661  T
Q  566 gaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||| ||||| |  |||||||||||| ||||||||||||||    
T  19390660 gaaattttgtaaattttaaacgagatacaaattaattata 19390621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 33041561 - 33041425
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  |||||||||||| ||  |||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| ||    
T  33041561 aaaattgaaattttgttccgcgtaagcgtatacaca--ggtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtg 33041464  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| ||| |||||| |||| ||||||||||||||    
T  33041463 aaattttgtagtctttaaatgagatacaaattaattata 33041425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 34083615 - 34083812
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  |||||||| ||||||       
T  34083615 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtgtactcagaa 34083713  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    | ||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| | ||||||||||||    
T  34083714 g-caaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatataaattaattata 34083812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 467 - 604
Target Start/End: Complemental strand, 27912615 - 27912478
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    ||||||| ||||||| ||  ||||||| ||||||||  |||||||||| |||||||||  ||  | |||||||| |||||| |||||||  | ||| |||    
T  27912615 aaaattgtaattttgatctgagtaagcatatactcataggtcaaattttgttccctaaatttgcaggcatggttggaacatgataagaacatgcaccatg 27912516  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattat 604  Q
    || ||||| |||||||||||||| ||||||||||||||    
T  27912515 aaattttggagtttttaaacgagggacaaattaattat 27912478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 494 - 604
Target Start/End: Complemental strand, 35937806 - 35937696
Alignment:
Q  494 gtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagac 593  Q
    |||||||||| ||||||||| | | |  |||| || || |||| |||||||||| ||||||| |||||| ||||||||||| |||||||||| |||| ||    
T  35937806 gtatactcacgggtcaaattccatcctgtaattttgtaggcatagttagaacatcataagaaccttcaccatgaagttttggagtttttaaaagagatac 35937707  T
Q  594 aaattaattat 604  Q
    |||||||||||    
T  35937706 aaattaattat 35937696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 393
Target Start/End: Original strand, 52091714 - 52091773
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 393  Q
    |||||||||||||| |||||| ||||||||||| |||||| |||| ||||||||||||||    
T  52091714 ataaaggacgaaaaagttaccaaaaaataagttgtgggactatttgtgtaattttgccta 52091773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 334 - 392
Target Start/End: Complemental strand, 52090939 - 52090881
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 392  Q
    ||||||||| |||||||||||||||||||||||| ||||| |||| | |||||||||||    
T  52090939 ataaaggactaaaacgttacctaaaaataagttaagggactatttatataattttgcct 52090881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 489
Target Start/End: Original strand, 3159292 - 3159388
Alignment:
Q  392 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagt 489  Q
    ||||||| || | |||| ||| |||||||||  | |||| |||||||||||||||||||  ||| |||| |||| |||||||||||||||||||||||    
T  3159292 taaaaacgatctacaaattttcatagcattttgaagacgtttcaatttatttttatttttcaaccaaaatgtgc-aaaattgaaattttgttcctagt 3159388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 330 - 395
Target Start/End: Complemental strand, 3612656 - 3612591
Alignment:
Q  330 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaa 395  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||| | || ||||||||| ||||||    
T  3612656 aaaaataaaggacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttacctaaa 3612591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 487 - 562
Target Start/End: Complemental strand, 7468899 - 7468824
Alignment:
Q  487 agtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcac 562  Q
    ||||||| ||||||||| | ||||||||||| | ||||| ||||| |||| ||||||||||||||| || ||||||    
T  7468899 agtaagcttatactcacggttcaaatttcgtcctctaattttataggcatagttagaacataataaaaaccttcac 7468824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 549 - 605
Target Start/End: Complemental strand, 8257357 - 8257301
Alignment:
Q  549 ataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||| |||||||||||| ||||  ||||||||||||| ||| ||||||||||||    
T  8257357 ataagaaccttcacaatgaaattttaaagtttttaaacgaaagaaaaattaattata 8257301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 397
Target Start/End: Complemental strand, 5048446 - 5048383
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 397  Q
    ||||||||  ||||||||| |||||| ||||||| | ||| |||| ||||||||||||||||||    
T  5048446 ataaaggattaaaacgttatctaaaattaagttaagagactatttatgtaattttgcctaaaaa 5048383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 5048783 - 5048720
Alignment:
Q  24 accacaaagttcctacaaccccaaaatttccttcctctattaggacccattttcgtcactgttc 87  Q
    |||||| | |||||||||| ||||||||| ||| ||||||  ||||||||||| ||||||||||    
T  5048783 accacacaattcctacaacaccaaaattttctttctctatagggacccatttttgtcactgttc 5048720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 450
Target Start/End: Original strand, 16094646 - 16094693
Alignment:
Q  403 tgcaaagttttatagcatttcaatgacgattcaatttatttttatttt 450  Q
    ||||||||||| ||||||||||| || | |||||||||||||||||||    
T  16094646 tgcaaagttttgtagcatttcaaagaagtttcaatttatttttatttt 16094693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 558 - 605
Target Start/End: Complemental strand, 38282936 - 38282889
Alignment:
Q  558 ttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||||| | ||| ||||||||||||||| ||||||||||||||    
T  38282936 ttcacaatgaaatcttgtagtttttaaacgagatacaaattaattata 38282889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 396
Target Start/End: Original strand, 44506331 - 44506394
Alignment:
Q  333 aataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 396  Q
    ||||||||||||||| ||||||||||| ||||||| ||||  | || |||||||||||| ||||    
T  44506331 aataaaggacgaaaatgttacctaaaattaagttaagggattaattgtgtaattttgcccaaaa 44506394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 496 - 602
Target Start/End: Original strand, 219189 - 219295
Alignment:
Q  496 atactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaa 595  Q
    |||||||  |||||||||| |||| ||||| || || ||||||||| ||||| | ||||| ||||||  | || ||||| || |||||||||||| | ||    
T  219189 atactcatgggtcaaattttgttctctaattttgtaggcatggttataacatcacaagaaacttcacctttaaattttggagattttaaacgagacaaaa 219288  T
Q  596 attaatt 602  Q
    |||||||    
T  219289 attaatt 219295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 17574434 - 17574372
Alignment:
Q  330 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 392  Q
    |||||||||||||||||  ||||||||||| |||||||  |||| | || |||||||||||||    
T  17574434 aaaaataaaggacgaaagtgttacctaaaattaagttaatggacgaattgtgtaattttgcct 17574372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 396
Target Start/End: Original strand, 22975629 - 22975695
Alignment:
Q  330 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaa 396  Q
    |||||||||||||||||  |||||||||||  |||||| ||||| | || |||||||||| ||||||    
T  22975629 aaaaataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgtctaaaa 22975695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 394
Target Start/End: Complemental strand, 8851861 - 8851801
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 394  Q
    |||||||||||||  |||||||||||  |||||| ||||| | || |||||||||||||||    
T  8851861 ataaaggacgaaagtgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 8851801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 398
Target Start/End: Original strand, 28830041 - 28830105
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaac 398  Q
    |||||||||||||  |||| ||||||  |||||| ||||| | || |||||||||||||||||||    
T  28830041 ataaaggacgaaagtgttagctaaaataaagttaagggactaattgtgtaattttgcctaaaaac 28830105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 8e-35; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 45419254 - 45419056
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||||||||      
T  45419254 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 45419156  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  45419155 gtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 45419056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 392 - 605
Target Start/End: Original strand, 7072016 - 7072228
Alignment:
Q  392 taaaaacaatttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaa 491  Q
    |||||| ||| || ||||||| |||||||||| |   ||||| |||||||||| |||||  ||| |||| |||||||| ||||||||||||||   ||||    
T  7072016 taaaaataatatgtaaagtttcatagcatttcgaaatcgattaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttcagcgtaa 7072114  T
Q  492 gcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagag 591  Q
    |||||||| |||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||| ||||||| ||||| |||| ||||||||||     
T  7072115 gcgtatacccacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcccaatgaaattttgtagttattaaacgagat 7072214  T
Q  592 acaaattaattata 605  Q
    ||||||||||||||    
T  7072215 acaaattaattata 7072228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 4554689 - 4554886
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| ||| |||||| ||| || || |||||||||||||||| || ||||||| ||||||| |||||||||||||||  | ||||||||||| ||      
T  4554689 aaagtttcataacatttcgatgtcgtttaaatttatttttattttcaaccaaaaag-tgcaaaa-ttgaaattttgttccacgcaagcgtatactaacaa 4554786  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    |||||||||  ||| ||||| || || |||||  |||||||| |||||||  ||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  4554787 gtcaaatttaattctctaattttgtaggcatgactagaacatgataagaacattcacaatgaaattttgtagtttttaaacgagatacaaattaattata 4554886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 35963363 - 35963165
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| ||||||| || | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  35963363 aaagtttcatagcatatcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatactcacaa 35963265  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| | ||||| |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  35963264 gtcaaatttagttccctaattttgtaggcatgactagaacatgacaagaaccttcacaatgaaattttgtaatttttaaacgagatacaaattaattata 35963165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 400 - 605
Target Start/End: Original strand, 17444528 - 17444733
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  17444528 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 17444626  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataag-aatcttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||| || |||||||||||| ||||| |  |||||||||||| |||||||    
T  17444627 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaaccttcacaatgaaattttgtaaattttaaacgagatacaaatt 17444726  T
Q  599 aattata 605  Q
    |||||||    
T  17444727 aattata 17444733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 31581175 - 31581313
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    ||||||||||||||||| |  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||||||    
T  31581175 aaaattgaaattttgtttcgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatg 31581274  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| | ||||||||||||| ||||||||||||||    
T  31581275 aaattttgtaatttttaaacgagatacaaattaattata 31581313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 400 - 605
Target Start/End: Original strand, 41251121 - 41251326
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  41251121 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 41251219  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  41251220 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 41251319  T
Q  599 aattata 605  Q
    |||||||    
T  41251320 aattata 41251326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 32126683 - 32126881
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| ||| ||||||||||||||||||||  ||||||||||||||||      
T  32126683 aaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtg-aaaaattgaaattttgttccgcgtaagcgtatactcacaa 32126781  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||||||| |||| || ||||| | |||| ||||| | ||||||||||||| ||||||||||||||    
T  32126782 gtcaaatttagttccctaattttgtaggcatgactagaacatgataataaccttcaaagtgaaattttgtaatttttaaacgagatacaaattaattata 32126881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 2957700 - 2957838
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||| ||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| || |||||||    
T  2957700 aaaattgaaattttgttccgcgtaagggtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaacctacacaatg 2957799  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| | ||||||||||||| ||||||||||||||    
T  2957800 aaattttgtaatttttaaacgagatacaaattaattata 2957838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 400 - 605
Target Start/End: Original strand, 6403291 - 6403496
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  6403291 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 6403389  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  6403390 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 6403489  T
Q  599 aattata 605  Q
    |||||||    
T  6403490 aattata 6403496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 467 - 605
Target Start/End: Original strand, 12756393 - 12756531
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||   |||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| ||||||| ||    
T  12756393 aaaattgaaattttgttccgcataagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacagtg 12756492  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| ||| ||||||||||| ||||||||||||||    
T  12756493 aaattttgtagtctttaaacgagatacaaattaattata 12756531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 18982202 - 18982064
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    |||||||||||||||||||  ||||||||||||||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| |||||| |||    
T  18982202 aaaattgaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacgatg 18982103  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||| | ||||||||||||| | ||||||||||||    
T  18982102 aaattttgtaatttttaaacgagataaaaattaattata 18982064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 435 - 592
Target Start/End: Complemental strand, 45121851 - 45121695
Alignment:
Q  435 aatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagc 534  Q
    |||||||||| |||||  ||| |||| ||| |||||||||||||||||||| |||||||||||||||||  ||||||||| |||||||||| || || |     
T  45121851 aatttattttgatttttcaaccaaaacgtg-aaaaattgaaattttgttccaagtaagcgtatactcacatgtcaaatttagttccctaattttgtacgt 45121753  T
Q  535 atggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagaga 592  Q
    |||  || ||||| ||||||| |||||||||||| ||||| ||||||||||| |||||    
T  45121752 atgactaaaacatgataagaaacttcacaatgaaattttgtagtttttaaacaagaga 45121695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 406 - 605
Target Start/End: Original strand, 26162198 - 26162396
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| ||| |||||| | | || || |||||||||| |||||  ||| |||| |||||||| |||||||||||||||  ||||||||||| ||||      
T  26162198 aaagtttcatatcatttcgaagtcgtttaaatttattttgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatagtcacaa 26162296  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || | |||  |||||||| ||||| | ||||| |||||| ||||| ||||||||||||||| |||||||| |||||    
T  26162297 gtcaaatttagttccctaattttgtaggtatgactagaacatgataaggaccttcagaatgaaattttgtagtttttaaacgagatacaaattagttata 26162396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 403 - 604
Target Start/End: Complemental strand, 26591716 - 26591517
Alignment:
Q  403 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 502  Q
    ||||||||||  ||||||||||| ||   |||||||||||||||||||  ||| |||| |||| ||| ||| ||||||| ||| ||||| ||||||||||    
T  26591716 tgcaaagtttcgtagcatttcaaagatatttcaatttatttttatttttcaaccaaaacgtgcgaaa-ttgcaattttgatccgagtaaacgtatactca 26591618  T
Q  503 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 602  Q
      ||||||||| | ||| ||||| || || ||||||||||| ||| ||||||| |||||| | ||| ||||  ||||||||||||||| |||||||||||    
T  26591617 tgggtcaaattccattctctaattttttaggcatggttagaccat-ataagaaccttcaccaagaaattttagagtttttaaacgagatacaaattaatt 26591519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 468 - 604
Target Start/End: Original strand, 37621618 - 37621754
Alignment:
Q  468 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatga 567  Q
    |||||| ||||||||||| ||||||| |||||||||   ||||| |  |||| ||||| || || ||||||||||||||| ||||||| |||||||||||    
T  37621618 aaattgcaattttgttccgagtaagcatatactcacgaatcaaagtctgttctctaattttgtaggcatggttagaacatcataagaaccttcacaatga 37621717  T
Q  568 agttttgcagtttttaaacgagagacaaattaattat 604  Q
    | ||||| ||||||||||||||| || ||||||||||    
T  37621718 aattttgaagtttttaaacgagatacgaattaattat 37621754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 2286460 - 2286263
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||  | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||||||      
T  2286460 aaagtttcatagcattttgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgtgtaagcgtatactcacaa 2286362  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    | ||||||| ||| |||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| | ||||||||||||| |||| |||||||||    
T  2286361 g-caaatttagtttcctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtaatttttaaacgagatacaacttaattata 2286263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 488 - 605
Target Start/End: Complemental strand, 26238531 - 26238414
Alignment:
Q  488 gtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacg 587  Q
    ||||||||||||||||  | ||||||| |||||||||| || || |||||  |||||||| ||||||| |||||||||||| ||||| |||||||||| |    
T  26238531 gtaagcgtatactcacaaggcaaatttagttccctaattttgtaggcatgactagaacatgataagaaccttcacaatgaaattttgtagtttttaaatg 26238432  T
Q  588 agagacaaattaattata 605  Q
    ||| ||||||||||||||    
T  26238431 agatacaaattaattata 26238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 416 - 604
Target Start/End: Complemental strand, 18829518 - 18829331
Alignment:
Q  416 agcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttc 515  Q
    |||||||||| |||| ||| ||||||||| |||||  ||| |||| |||| ||| ||| ||||||||||| |||||| |||||||||| ||||||||| |    
T  18829518 agcatttcaaagacgtttcgatttattttaatttttcaacgaaaacgtgcgaaa-ttgcaattttgttccgagtaagtgtatactcacgggtcaaattcc 18829420  T
Q  516 gttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 604  Q
    |||| ||||| || || |||| |||||||||| |||||||  |||||  |||| ||| | ||||||||||| | | || ||||||||||    
T  18829419 gttctctaattttgtaggcatagttagaacatcataagaacattcaccgtgaaatttagaagtttttaaacaatatacgaattaattat 18829331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 467 - 605
Target Start/End: Complemental strand, 42442597 - 42442459
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    ||||||||||||||||||   ||||||||||||||||  ||||||||| ||||| |||| || || |||||  |||||||| |||||||  |||||||||    
T  42442597 aaaattgaaattttgttctgcgtaagcgtatactcacaagtcaaatttagttccataattttgtaggcatgactagaacatgataagaacattcacaatg 42442498  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattata 605  Q
    || ||||  | ||||||||||||| | ||||||| ||||    
T  42442497 aaattttataatttttaaacgagatataaattaactata 42442459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 495 - 605
Target Start/End: Original strand, 44084185 - 44084295
Alignment:
Q  495 tatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagaca 594  Q
    |||||||||  ||||||||| |||||||||| || || |||||  ||||| || |||| || |||||||||||| ||||| ||||||||||||||| |||    
T  44084185 tatactcacaagtcaaatttagttccctaattttgtaggcatgactagaaaatgataataaccttcacaatgaaattttgtagtttttaaacgagataca 44084284  T
Q  595 aattaattata 605  Q
    |||||||||||    
T  44084285 aattaattata 44084295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 467 - 604
Target Start/End: Original strand, 816613 - 816750
Alignment:
Q  467 aaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatg 566  Q
    ||||||| |||||| || | |||||||||||||| || |||||||||| ||| |||||| || || |||||||  || ||| |||||||   ||||  ||    
T  816613 aaaattgcaattttatttcgagtaagcgtatacttacgggtcaaattttgtttcctaattttgtaggcatggtaggagcattataagaactatcactttg 816712  T
Q  567 aagttttgcagtttttaaacgagagacaaattaattat 604  Q
    || ||||| |||||||||| ||||||||||||||||||    
T  816713 aaattttggagtttttaaaggagagacaaattaattat 816750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 515 - 604
Target Start/End: Complemental strand, 21556659 - 21556570
Alignment:
Q  515 cgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 604  Q
    ||||| ||||| || || |||||||| |||||| ||||||| |||||| ||||| ||||| ||||||||||||||| |||||||||||||    
T  21556659 cgttctctaattttgtaggcatggttggaacatcataagaaccttcaccatgaaattttggagtttttaaacgagatacaaattaattat 21556570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 468 - 603
Target Start/End: Original strand, 17373394 - 17373530
Alignment:
Q  468 aaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataagcatggtt-agaacataataagaatcttcacaatg 566  Q
    |||||| ||||||||||| | ||||||||||||||| ||||||||||| ||| ||||| || || |||||||| | ||||| |||||||  ||||| |||    
T  17373394 aaattgcaattttgttccaaataagcgtatactcacgggtcaaatttcattctctaattttgtaggcatggttaaaaacatcataagaacattcaccatg 17373493  T
Q  567 aagttttgcagtttttaaacgagagacaaattaatta 603  Q
    || ||||| ||||| |||| | || || |||||||||    
T  17373494 aaattttggagtttctaaatgtgatacgaattaatta 17373530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 393
Target Start/End: Original strand, 8322471 - 8322530
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgccta 393  Q
    |||||||||||||| ||||||||||| ||||||| ||||| | |||||||||||||||||    
T  8322471 ataaaggacgaaaatgttacctaaaattaagttaagggacgaattctgtaattttgccta 8322530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 438 - 525
Target Start/End: Original strand, 8058871 - 8058957
Alignment:
Q  438 ttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaat 525  Q
    ||||||| |||||  ||| |||| |||||||| || ||||||||||||  ||||||||||||||||  ||||||||| ||||||||||    
T  8058871 ttattttgatttttcaaccaaaacgtgcaaaa-ttaaaattttgttccgcgtaagcgtatactcacaagtcaaatttagttccctaat 8058957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 489 - 604
Target Start/End: Complemental strand, 25391568 - 25391454
Alignment:
Q  489 taagcgtatactcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacga 588  Q
    ||||| |||||||| |||||||||||| ||| ||||| || || ||||||||||||||| ||||| |  ||||| || || ||||| |||||||||| ||    
T  25391568 taagcatatactca-tggtcaaatttcattcactaattttgtaggcatggttagaacatcataagtactttcaccataaaattttggagtttttaaagga 25391470  T
Q  589 gagacaaattaattat 604  Q
    || | || ||||||||    
T  25391469 gaaataagttaattat 25391454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 334 - 397
Target Start/End: Original strand, 27360410 - 27360473
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaaaaa 397  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || ||||||||||||||||||    
T  27360410 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcctaaaaa 27360473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 394
Target Start/End: Original strand, 30337717 - 30337777
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 394  Q
    ||||||||||| || |||| |||||| ||||||| ||||| | ||||||||||||||||||    
T  30337717 ataaaggacgataatgttatctaaaattaagttaagggactaattctgtaattttgcctaa 30337777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 334 - 392
Target Start/End: Complemental strand, 17846065 - 17846007
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 392  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||||    
T  17846065 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcct 17846007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 391
Target Start/End: Complemental strand, 30337481 - 30337424
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 391  Q
    |||||||||||||| ||||||||||| |||||||  |||| | || ||||||||||||    
T  30337481 ataaaggacgaaaatgttacctaaaattaagttaatggactaattgtgtaattttgcc 30337424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 71; Significance: 7e-32; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 400 - 605
Target Start/End: Complemental strand, 18238 - 18033
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| | | || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  18238 atttgtaaagtttcatagcatttcgaagtcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 18140  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataag-aatcttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| |||||||||| || ||||||||  |||||||| ||||| || |||||||||||| ||||| |  |||||||||| | |||||||    
T  18139 tcacaagtcaaatttagttccctaattttgtaagcatgactagaacatgataagaaaccttcacaatgaaattttgtaaattttaaacgatatacaaatt 18040  T
Q  599 aattata 605  Q
    |||||||    
T  18039 aattata 18033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 405 - 605
Target Start/End: Complemental strand, 17978 - 17781
Alignment:
Q  405 caaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcact 504  Q
    |||||||| ||| |||||| | |||| | |||||| ||||||||||  ||| ||| | ||||||| |||||||||||||||||||||  ||||||| |      
T  17978 caaagtttcatatcatttcgaagacgttgcaatttgtttttatttttcaaccaaacg-tgcaaaa-ttgaaattttgttcctagtaattgtatactaata 17881  T
Q  505 ggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattat 604  Q
    | |||||| ||||||| |||| || || ||||||||||||||||||| ||| |||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  17880 gatcaaatgtcgttccttaattttgtaggcatggttagaacataatatgaaccttcacaatgaaattttgctgtttttaaa-gagagacaaattacttat 17782  T

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Target: scaffold0041 (Bit Score: 68; Significance: 5e-30; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 406 - 605
Target Start/End: Complemental strand, 53578 - 53380
Alignment:
Q  406 aaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactg 505  Q
    ||||||| |||||||||| | | || || |||||||| | |||||  ||| |||| |||||||| |||||||||||||||  ||||| ||||||||||      
T  53578 aaagtttcatagcatttcgaagtcgtttaaatttattatgatttttcaaccaaaacgtgcaaaa-ttgaaattttgttccgcgtaagtgtatactcacaa 53480  T
Q  506 gtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaattata 605  Q
    ||||||||| |||||||||| || || |||||  |||| ||| ||||||| ||||||| |||| ||||| ||| ||||||||||| ||||||||||||||    
T  53479 gtcaaatttagttccctaattttgtaggcatgactagagcatgataagaaccttcacagtgaaattttgtagtctttaaacgagatacaaattaattata 53380  T

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Target: scaffold0002 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 400 - 605
Target Start/End: Original strand, 479944 - 480149
Alignment:
Q  400 atttgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatac 499  Q
    ||||| ||||||| |||||||||| |   || || |||||||||| |||||  |||  ||| |||||||| |||||||||||||||  ||||||||||||    
T  479944 atttgtaaagtttcatagcatttcgaaatcgtttaaatttattttgatttttcaactgaaacgtgcaaaa-ttgaaattttgttccgcgtaagcgtatac 480042  T
Q  500 tcactggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatc-ttcacaatgaagttttgcagtttttaaacgagagacaaatt 598  Q
    ||||  ||||||||| |||||||||| || || |||||  |||||||| ||||||| | ||||||||||| ||||| |  |||||||||||| |||||||    
T  480043 tcacaagtcaaatttagttccctaattttgtaggcatgactagaacatgataagaaacattcacaatgaaattttgtaaattttaaacgagatacaaatt 480142  T
Q  599 aattata 605  Q
    |||||||    
T  480143 aattata 480149  T

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Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 394
Target Start/End: Complemental strand, 330254 - 330194
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 394  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||||||    
T  330254 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 330194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 403 - 601
Target Start/End: Complemental strand, 35479 - 35277
Alignment:
Q  403 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 502  Q
    ||||||||||| ||| |||| || |||  |||| ||||||||||||||  || ||||| |||| ||| ||| ||||||||||| ||||| |||||| ||     
T  35479 tgcaaagttttgtaggattttaaagacatttcattttatttttatttttcaagaaaaatgtgcgaaa-ttggaattttgttccgagtaaacgtatattcg 35381  T
Q  503 ctggtcaaatttcgttccctaatcttat-----aagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaat 597  Q
      ||||||||| || || || || ||||     | ||||||||||||||| ||||||| |||||| ||||| ||||| |||||||||||||||  |||||    
T  35380 tgggtcaaattccgctctcttattttattttataggcatggttagaacattataagaaccttcaccatgaaattttggagtttttaaacgagatgcaaat 35281  T
Q  598 taat 601  Q
    ||||    
T  35280 taat 35277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 403 - 604
Target Start/End: Complemental strand, 8695 - 8495
Alignment:
Q  403 tgcaaagttttatagcatttcaatgacgattcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactca 502  Q
    |||||| ||| |||| ||||||| || | ||| |||| ||||||||||  ||| |||| |||  ||| ||| ||||||||||  ||||| | |||| |||    
T  8695 tgcaaaatttcatagtatttcaaagatgtttcgatttctttttatttttcaaccaaaacgtgtgaaa-ttgcaattttgttctgagtaaacatatattca 8597  T
Q  503 ctggtcaaatttcgttccctaatcttataagcatggttagaacataataagaatcttcacaatgaagttttgcagtttttaaacgagagacaaattaatt 602  Q
    |  |||||||||||||  ||||| || || ||||||||||||||  ||||||| |||||| ||||| ||||| || ||||||| |||| || ||||||||    
T  8596 cgagtcaaatttcgttttctaattttctaggcatggttagaacaacataagaaccttcaccatgaaattttgaagattttaaatgagatacgaattaatt 8497  T
Q  603 at 604  Q
    ||    
T  8496 at 8495  T

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Target: scaffold0831 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 433 - 573
Target Start/End: Complemental strand, 3521 - 3383
Alignment:
Q  433 tcaatttatttttattttaaaacaaaaaggtgcaaaaattgaaattttgttcctagtaagcgtatactcactggtcaaatttcgttccctaatcttataa 532  Q
    ||||||| ||||||||||  |||||||| |||||||| ||| ||||||||||| | ||| | ||||||||| | |||||| | |||||| ||| || ||     
T  3521 tcaatttgtttttatttttcaacaaaaatgtgcaaaa-ttgcaattttgttccgactaaccatatactcacggatcaaatgttgttccccaattttgtag 3423  T
Q  533 gcatggttagaacataataagaatcttcacaatgaagtttt 573  Q
    |||||||||||| ||  ||||||| ||||| ||||| ||||    
T  3422 gcatggttagaatat-gtaagaattttcaccatgaattttt 3383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 394
Target Start/End: Original strand, 12885 - 12945
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 394  Q
    |||||||||||||| |||| |||||| ||||||| ||||| | || |||||||||||||||    
T  12885 ataaaggacgaaaatgttatctaaaattaagttaagggactaattgtgtaattttgcctaa 12945  T

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Target: scaffold0029 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 394
Target Start/End: Complemental strand, 136973 - 136913
Alignment:
Q  334 ataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcctaa 394  Q
    |||||||||||||| |||||||||||  |||||| ||||| | || |||||||||||||||    
T  136973 ataaaggacgaaaatgttacctaaaataaagttaagggactaattgtgtaattttgcctaa 136913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 12001 - 11940
Alignment:
Q  330 aaaaataaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcc 391  Q
    ||||| |||| ||||||| ||||||||||| ||||||| ||||| | || ||||||||||||    
T  12001 aaaaaaaaagaacgaaaatgttacctaaaattaagttaagggactaattgtgtaattttgcc 11940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 392
Target Start/End: Original strand, 12223 - 12280
Alignment:
Q  335 taaaggacgaaaacgttacctaaaaataagttatgggaccatttctgtaattttgcct 392  Q
    ||||||||||||  ||||||||||| ||||||| ||||| | || |||||||||||||    
T  12223 taaaggacgaaagtgttacctaaaattaagttaagggactaattgtgtaattttgcct 12280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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