View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17651_low_7 (Length: 592)

Name: NF17651_low_7
Description: NF17651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17651_low_7
NF17651_low_7
[»] chr8 (42 HSPs)
chr8 (2-227)||(29382235-29382460)
chr8 (2-227)||(24114158-24114381)
chr8 (2-227)||(24269598-24269821)
chr8 (26-225)||(18448440-18448639)
chr8 (13-225)||(17101790-17101990)
chr8 (25-215)||(17509258-17509446)
chr8 (28-226)||(25226137-25226334)
chr8 (25-199)||(27659473-27659637)
chr8 (1-225)||(13314865-13315089)
chr8 (2-271)||(24110544-24110807)
chr8 (25-227)||(14528149-14528350)
chr8 (129-226)||(5850942-5851039)
chr8 (11-193)||(23893097-23893266)
chr8 (13-227)||(34497115-34497329)
chr8 (1-187)||(16403952-16404126)
chr8 (129-227)||(17976619-17976717)
chr8 (129-227)||(24904633-24904731)
chr8 (130-227)||(15238799-15238896)
chr8 (2-189)||(13697893-13698078)
chr8 (107-227)||(30806475-30806596)
chr8 (159-222)||(30783772-30783835)
chr8 (128-222)||(2637603-2637697)
chr8 (29-227)||(6884958-6885155)
chr8 (11-226)||(19786732-19786947)
chr8 (129-222)||(14075599-14075692)
chr8 (25-186)||(18569107-18569256)
chr8 (2-226)||(25182302-25182526)
chr8 (2-74)||(26394573-26394644)
chr8 (129-227)||(30122156-30122253)
chr8 (2-83)||(24644984-24645065)
chr8 (152-221)||(44011048-44011116)
chr8 (1-89)||(44010897-44010984)
chr8 (26-89)||(7983720-7983781)
chr8 (127-209)||(21314641-21314723)
chr8 (173-227)||(26008023-26008077)
chr8 (169-226)||(24119810-24119866)
chr8 (129-230)||(24644835-24644935)
chr8 (25-139)||(19264130-19264233)
chr8 (130-225)||(31288360-31288454)
chr8 (169-227)||(5052962-5053020)
chr8 (12-188)||(14626069-14626244)
chr8 (23-89)||(30122050-30122114)
[»] chr4 (60 HSPs)
chr4 (2-227)||(13908854-13909079)
chr4 (28-226)||(15164768-15164964)
chr4 (44-223)||(16730316-16730494)
chr4 (1-225)||(7582299-7582523)
chr4 (2-226)||(19492586-19492798)
chr4 (26-227)||(17216817-17217020)
chr4 (7-227)||(13692560-13692768)
chr4 (1-227)||(17709757-17709979)
chr4 (6-227)||(13128752-13128973)
chr4 (1-227)||(19562048-19562277)
chr4 (129-229)||(20314998-20315098)
chr4 (2-193)||(17337009-17337200)
chr4 (28-227)||(17672002-17672200)
chr4 (126-227)||(21323873-21323974)
chr4 (107-225)||(11490534-11490648)
chr4 (32-227)||(14648895-14649089)
chr4 (131-225)||(13992879-13992973)
chr4 (129-227)||(19882640-19882738)
chr4 (1-190)||(17026217-17026394)
chr4 (129-225)||(25121227-25121322)
chr4 (29-227)||(20829640-20829837)
chr4 (128-227)||(9052674-9052772)
chr4 (128-227)||(12578266-12578365)
chr4 (128-226)||(5679206-5679304)
chr4 (56-226)||(8969655-8969819)
chr4 (7-89)||(25097959-25098041)
chr4 (129-226)||(11700571-11700667)
chr4 (1-190)||(25094605-25094780)
chr4 (128-227)||(19929675-19929774)
chr4 (11-82)||(24639344-24639415)
chr4 (143-225)||(19374828-19374909)
chr4 (141-227)||(22175975-22176061)
chr4 (11-227)||(40227777-40227992)
chr4 (10-226)||(26115788-26116001)
chr4 (128-227)||(11933419-11933517)
chr4 (128-227)||(19092295-19092394)
chr4 (112-225)||(19636573-19636682)
chr4 (143-227)||(9737519-9737608)
chr4 (136-225)||(15047130-15047219)
chr4 (136-225)||(15107205-15107294)
chr4 (129-222)||(22526369-22526462)
chr4 (129-225)||(11093966-11094062)
chr4 (129-225)||(11521192-11521288)
chr4 (2-89)||(25121101-25121186)
chr4 (105-190)||(12406666-12406753)
chr4 (157-227)||(19900580-19900649)
chr4 (16-225)||(22357420-22357632)
chr4 (143-209)||(24639469-24639535)
chr4 (171-226)||(17951339-17951394)
chr4 (171-226)||(17955191-17955246)
chr4 (155-225)||(12839807-12839877)
chr4 (25-89)||(17951194-17951256)
chr4 (25-89)||(17955046-17955108)
chr4 (127-190)||(25097872-25097935)
chr4 (1-47)||(11935237-11935283)
chr4 (1-75)||(12406576-12406650)
chr4 (11-89)||(19374696-19374772)
chr4 (53-89)||(9264930-9264966)
chr4 (179-227)||(12318433-12318481)
chr4 (129-193)||(23080375-23080439)
[»] chr1 (62 HSPs)
chr1 (2-226)||(17610130-17610354)
chr1 (2-227)||(15543841-15544065)
chr1 (13-224)||(16179010-16179220)
chr1 (13-227)||(25405516-25405729)
chr1 (7-227)||(21449089-21449297)
chr1 (2-227)||(12208601-12208826)
chr1 (1-213)||(21666482-21666693)
chr1 (1-227)||(17359162-17359387)
chr1 (15-227)||(29242519-29242718)
chr1 (21-227)||(14779565-14779771)
chr1 (1-190)||(9401542-9401731)
chr1 (11-227)||(21987877-21988081)
chr1 (1-227)||(18736125-18736339)
chr1 (26-225)||(31235947-31236145)
chr1 (2-227)||(21334592-21334818)
chr1 (1-227)||(18825656-18825869)
chr1 (7-227)||(16069441-16069649)
chr1 (1-226)||(22622892-22623116)
chr1 (2-227)||(13345212-13345435)
chr1 (1-199)||(727495-727681)
chr1 (1-190)||(16916819-16916995)
chr1 (129-227)||(3591654-3591752)
chr1 (59-217)||(16787657-16787815)
chr1 (127-226)||(15813523-15813623)
chr1 (2-227)||(23037885-23038110)
chr1 (11-223)||(33190681-33190892)
chr1 (129-227)||(17837517-17837615)
chr1 (26-181)||(18830527-18830670)
chr1 (131-227)||(21847634-21847729)
chr1 (129-227)||(24306307-24306404)
chr1 (1-190)||(14781739-14781915)
chr1 (56-227)||(15813083-15813253)
chr1 (1-186)||(23179839-23180010)
chr1 (128-227)||(9787879-9787978)
chr1 (15-86)||(18529079-18529149)
chr1 (127-222)||(51473875-51473968)
chr1 (25-107)||(18100911-18100989)
chr1 (128-227)||(22664206-22664305)
chr1 (128-227)||(24281277-24281376)
chr1 (128-226)||(26648971-26649068)
chr1 (106-191)||(24054015-24054099)
chr1 (130-227)||(27117720-27117817)
chr1 (129-222)||(34480974-34481067)
chr1 (163-227)||(26540896-26540959)
chr1 (2-89)||(15807895-15807980)
chr1 (29-87)||(21973107-21973164)
chr1 (127-227)||(32383008-32383097)
chr1 (129-226)||(24267783-24267880)
chr1 (131-227)||(12012803-12012899)
chr1 (2-89)||(12012688-12012773)
chr1 (128-226)||(147632-147730)
chr1 (148-226)||(44795370-44795447)
chr1 (127-227)||(16359871-16359970)
chr1 (1-73)||(25403964-25404036)
chr1 (1-89)||(32382882-32382968)
chr1 (26-89)||(16360010-16360071)
chr1 (7-89)||(17121380-17121460)
chr1 (11-89)||(28008244-28008320)
chr1 (28-89)||(9787779-9787839)
chr1 (128-213)||(24214558-24214643)
chr1 (56-89)||(51473803-51473836)
chr1 (127-199)||(22620290-22620362)
[»] chr2 (50 HSPs)
chr2 (14-227)||(17743363-17743575)
chr2 (2-227)||(27908993-27909218)
chr2 (1-227)||(28925522-28925747)
chr2 (1-227)||(29719105-29719330)
chr2 (8-227)||(25196011-25196229)
chr2 (25-225)||(31804796-31804997)
chr2 (1-222)||(17349362-17349574)
chr2 (1-227)||(15339238-15339464)
chr2 (2-226)||(30411679-30411892)
chr2 (40-227)||(17635687-17635874)
chr2 (1-192)||(29142996-29143175)
chr2 (11-225)||(32085465-32085678)
chr2 (7-227)||(17675508-17675729)
chr2 (127-225)||(45621880-45621978)
chr2 (2-227)||(26603234-26603449)
chr2 (128-225)||(20174635-20174732)
chr2 (1-199)||(24090812-24090997)
chr2 (2-227)||(25618557-25618780)
chr2 (1-190)||(25920303-25920479)
chr2 (1-226)||(11382626-11382851)
chr2 (11-222)||(25885345-25885553)
chr2 (127-227)||(12953293-12953393)
chr2 (125-199)||(25535302-25535376)
chr2 (128-227)||(25888224-25888319)
chr2 (29-226)||(13776340-13776536)
chr2 (2-199)||(25530475-25530660)
chr2 (129-227)||(45553130-45553228)
chr2 (128-227)||(19200135-19200233)
chr2 (129-227)||(8503071-8503169)
chr2 (10-89)||(25887786-25887864)
chr2 (128-199)||(27418394-27418465)
chr2 (157-227)||(8447079-8447148)
chr2 (120-190)||(17197906-17197976)
chr2 (129-227)||(23011764-23011861)
chr2 (120-190)||(26667355-26667425)
chr2 (9-74)||(12953225-12953290)
chr2 (127-187)||(9774334-9774394)
chr2 (143-187)||(21078641-21078685)
chr2 (2-89)||(23933420-23933505)
chr2 (2-89)||(45553268-45553352)
chr2 (129-223)||(28770444-28770538)
chr2 (155-229)||(32440024-32440097)
chr2 (128-189)||(28606178-28606239)
chr2 (155-227)||(12557736-12557807)
chr2 (1-89)||(17197994-17198082)
chr2 (1-69)||(26667452-26667520)
chr2 (53-85)||(45621806-45621838)
chr2 (26-89)||(17890076-17890137)
chr2 (2-89)||(25535400-25535486)
chr2 (129-166)||(5777277-5777314)
[»] chr3 (63 HSPs)
chr3 (1-225)||(17438304-17438527)
chr3 (2-227)||(21301918-21302144)
chr3 (7-228)||(19908306-19908527)
chr3 (7-215)||(932754-932962)
chr3 (2-227)||(12411151-12411372)
chr3 (1-227)||(4650232-4650451)
chr3 (2-226)||(2167492-2167714)
chr3 (17-223)||(20429714-20429920)
chr3 (4-193)||(19925498-19925688)
chr3 (2-226)||(16245604-16245827)
chr3 (1-227)||(8770020-8770233)
chr3 (29-227)||(3116321-3116517)
chr3 (1-193)||(12754796-12754977)
chr3 (128-227)||(21325340-21325439)
chr3 (103-226)||(22349410-22349532)
chr3 (14-230)||(21303241-21303456)
chr3 (1-199)||(8765145-8765331)
chr3 (7-190)||(16229833-16230004)
chr3 (7-227)||(12805770-12805989)
chr3 (103-227)||(19171810-19171933)
chr3 (129-220)||(821515-821606)
chr3 (2-227)||(41508367-41508591)
chr3 (106-199)||(8889130-8889223)
chr3 (1-85)||(8170013-8170097)
chr3 (141-227)||(10917918-10918004)
chr3 (129-225)||(21825870-21825965)
chr3 (9-190)||(27413778-27413944)
chr3 (155-226)||(12759388-12759459)
chr3 (145-227)||(10744902-10744984)
chr3 (133-199)||(28728972-28729038)
chr3 (161-226)||(18458457-18458522)
chr3 (2-227)||(5508336-5508560)
chr3 (1-89)||(8882996-8883084)
chr3 (12-185)||(19576105-19576265)
chr3 (128-215)||(8319051-8319138)
chr3 (105-188)||(19909937-19910020)
chr3 (128-226)||(18736672-18736769)
chr3 (129-227)||(6289903-6290001)
chr3 (129-199)||(8557130-8557200)
chr3 (120-186)||(19167452-19167518)
chr3 (1-58)||(7494988-7495045)
chr3 (129-226)||(31286017-31286112)
chr3 (136-224)||(10923150-10923238)
chr3 (169-225)||(27542956-27543011)
chr3 (1-88)||(20023426-20023512)
chr3 (119-190)||(20023531-20023602)
chr3 (127-181)||(7478334-7478388)
chr3 (120-190)||(8169922-8169992)
chr3 (28-89)||(21825770-21825829)
chr3 (129-225)||(8143617-8143711)
chr3 (1-89)||(19909846-19909934)
chr3 (26-89)||(10745040-10745101)
chr3 (169-227)||(11518002-11518060)
chr3 (28-89)||(17155931-17155989)
chr3 (25-85)||(2723733-2723790)
chr3 (127-184)||(7495094-7495151)
chr3 (7-60)||(19171746-19171799)
chr3 (127-188)||(19532319-19532380)
chr3 (157-190)||(25756712-25756745)
chr3 (126-190)||(8445859-8445922)
chr3 (170-226)||(11533017-11533073)
chr3 (157-221)||(21019625-21019688)
chr3 (9-89)||(21325480-21325558)
[»] chr7 (94 HSPs)
chr7 (7-271)||(1848107-1848376)
chr7 (2-230)||(2563815-2564043)
chr7 (76-225)||(13759808-13759957)
chr7 (7-216)||(39273055-39273263)
chr7 (13-225)||(3329542-3329755)
chr7 (1-227)||(8053936-8054157)
chr7 (11-225)||(8978889-8979103)
chr7 (28-227)||(18368879-18369079)
chr7 (7-227)||(20582259-20582475)
chr7 (96-227)||(8054458-8054588)
chr7 (1-199)||(11803108-11803294)
chr7 (25-227)||(9731524-9731726)
chr7 (1-190)||(16058906-16059083)
chr7 (2-227)||(5108566-5108790)
chr7 (1-226)||(6042462-6042676)
chr7 (1-193)||(8877455-8877647)
chr7 (129-227)||(18662441-18662539)
chr7 (11-225)||(3734598-3734811)
chr7 (142-227)||(23099966-23100051)
chr7 (7-225)||(16365707-16365925)
chr7 (128-227)||(10587024-10587123)
chr7 (11-227)||(13418534-13418737)
chr7 (28-199)||(7492163-7492334)
chr7 (129-227)||(9864327-9864425)
chr7 (1-193)||(13277537-13277717)
chr7 (25-222)||(17077133-17077317)
chr7 (127-227)||(11221163-11221263)
chr7 (25-225)||(17153051-17153251)
chr7 (56-227)||(7318273-7318445)
chr7 (128-227)||(31492930-31493029)
chr7 (129-223)||(5530025-5530119)
chr7 (2-227)||(9574407-9574631)
chr7 (105-199)||(4449008-4449102)
chr7 (129-227)||(4579098-4579195)
chr7 (7-227)||(4785837-4786060)
chr7 (67-227)||(12329682-12329843)
chr7 (129-226)||(10584487-10584584)
chr7 (128-227)||(1872785-1872884)
chr7 (7-89)||(7397280-7397361)
chr7 (129-227)||(9245181-9245279)
chr7 (129-227)||(9500444-9500542)
chr7 (129-227)||(10937602-10937700)
chr7 (128-217)||(10648588-10648677)
chr7 (127-227)||(2350746-2350846)
chr7 (127-227)||(4818837-4818936)
chr7 (128-227)||(12181608-12181708)
chr7 (25-227)||(16297731-16297919)
chr7 (128-227)||(1584545-1584642)
chr7 (10-89)||(17191096-17191175)
chr7 (128-226)||(4986556-4986654)
chr7 (128-226)||(4990654-4990752)
chr7 (26-221)||(8313291-8313488)
chr7 (129-227)||(9916566-9916664)
chr7 (129-227)||(9924478-9924576)
chr7 (129-227)||(14195974-14196071)
chr7 (129-227)||(21230312-21230410)
chr7 (25-227)||(1587681-1587881)
chr7 (133-226)||(14755135-14755228)
chr7 (126-191)||(17203059-17203124)
chr7 (129-198)||(22339312-22339381)
chr7 (163-227)||(15869595-15869659)
chr7 (163-227)||(18661590-18661654)
chr7 (29-89)||(19153434-19153493)
chr7 (29-89)||(20752833-20752892)
chr7 (130-226)||(26134750-26134845)
chr7 (128-227)||(6013593-6013692)
chr7 (2-89)||(18662579-18662664)
chr7 (129-227)||(5797511-5797609)
chr7 (129-227)||(18449242-18449340)
chr7 (129-199)||(18467479-18467549)
chr7 (129-226)||(18495374-18495471)
chr7 (4-88)||(31493066-31493148)
chr7 (129-225)||(6005839-6005934)
chr7 (2-85)||(17829712-17829793)
chr7 (2-89)||(9131049-9131135)
chr7 (129-220)||(9261211-9261302)
chr7 (129-220)||(18466012-18466103)
chr7 (128-166)||(3191059-3191097)
chr7 (129-227)||(5047388-5047485)
chr7 (11-85)||(8293925-8293997)
chr7 (156-225)||(7397198-7397266)
chr7 (129-226)||(16306695-16306792)
chr7 (1-89)||(10586897-10586984)
chr7 (106-190)||(13289385-13289469)
chr7 (103-190)||(22067199-22067287)
chr7 (176-227)||(17151799-17151849)
chr7 (157-227)||(9866570-9866639)
chr7 (129-227)||(12391185-12391283)
chr7 (155-209)||(21102320-21102374)
chr7 (56-89)||(10648717-10648750)
chr7 (56-89)||(14195899-14195932)
chr7 (105-190)||(17191178-17191263)
chr7 (173-222)||(21227184-21227233)
chr7 (155-227)||(23093310-23093381)
[»] chr6 (69 HSPs)
chr6 (2-212)||(23231859-23232067)
chr6 (7-227)||(5624640-5624860)
chr6 (7-225)||(23844344-23844562)
chr6 (7-227)||(27737568-27737788)
chr6 (25-226)||(9516786-9516987)
chr6 (26-227)||(17826994-17827191)
chr6 (1-225)||(27124368-27124589)
chr6 (34-211)||(22410234-22410410)
chr6 (129-227)||(9726022-9726120)
chr6 (2-230)||(12183205-12183433)
chr6 (135-225)||(17729154-17729244)
chr6 (7-188)||(24475095-24475275)
chr6 (2-165)||(14636929-14637093)
chr6 (55-227)||(23143722-23143894)
chr6 (1-226)||(25781796-25782003)
chr6 (1-199)||(24657342-24657526)
chr6 (25-227)||(8241277-8241475)
chr6 (127-227)||(21672434-21672534)
chr6 (1-191)||(11135943-11136123)
chr6 (127-227)||(21679850-21679950)
chr6 (132-227)||(21907432-21907527)
chr6 (1-198)||(23009281-23009464)
chr6 (1-198)||(23778900-23779083)
chr6 (1-110)||(20005791-20005900)
chr6 (1-192)||(21841573-21841752)
chr6 (126-222)||(23645765-23645861)
chr6 (107-226)||(4339736-4339851)
chr6 (105-191)||(22413026-22413112)
chr6 (130-227)||(25927305-25927402)
chr6 (128-225)||(28933660-28933757)
chr6 (56-227)||(11176950-11177122)
chr6 (7-227)||(14079337-14079543)
chr6 (148-226)||(20005899-20005977)
chr6 (129-222)||(17299832-17299925)
chr6 (129-222)||(22566163-22566256)
chr6 (126-186)||(24252227-24252287)
chr6 (10-199)||(9838384-9838572)
chr6 (128-227)||(15466370-15466468)
chr6 (123-222)||(17883780-17883878)
chr6 (128-227)||(22567840-22567939)
chr6 (145-227)||(19244585-19244667)
chr6 (128-227)||(8039139-8039230)
chr6 (144-225)||(18075404-18075485)
chr6 (1-113)||(20144995-20145108)
chr6 (128-225)||(21688795-21688892)
chr6 (1-113)||(22187731-22187844)
chr6 (129-226)||(28586031-28586128)
chr6 (28-166)||(22813621-22813747)
chr6 (141-227)||(2586721-2586806)
chr6 (7-80)||(1635110-1635181)
chr6 (25-82)||(17382214-17382270)
chr6 (10-73)||(17883724-17883786)
chr6 (176-227)||(21932100-21932151)
chr6 (14-89)||(22566048-22566122)
chr6 (132-227)||(24251516-24251611)
chr6 (11-89)||(23645651-23645727)
chr6 (130-227)||(7542962-7543059)
chr6 (11-76)||(19244726-19244789)
chr6 (147-191)||(6630711-6630755)
chr6 (128-226)||(9898958-9899057)
chr6 (156-227)||(17382145-17382216)
chr6 (7-89)||(22412941-22413022)
chr6 (141-227)||(28589443-28589529)
chr6 (162-220)||(34478532-34478589)
chr6 (174-227)||(20145106-20145159)
chr6 (174-227)||(22187680-22187733)
chr6 (21-85)||(24252124-24252186)
chr6 (56-89)||(28933587-28933620)
chr6 (160-227)||(20722209-20722274)
[»] scaffold0638 (1 HSPs)
scaffold0638 (1-225)||(695-919)
[»] scaffold0035 (2 HSPs)
scaffold0035 (10-227)||(69913-70129)
scaffold0035 (105-166)||(98689-98749)
[»] chr5 (49 HSPs)
chr5 (7-159)||(20744549-20744699)
chr5 (54-227)||(19004153-19004325)
chr5 (7-226)||(17431884-17432102)
chr5 (2-226)||(24245418-24245642)
chr5 (7-227)||(20315309-20315528)
chr5 (7-226)||(39434464-39434674)
chr5 (2-227)||(34128637-34128860)
chr5 (2-227)||(15375769-15375981)
chr5 (70-225)||(19051551-19051704)
chr5 (103-226)||(23388813-23388935)
chr5 (10-227)||(24140443-24140652)
chr5 (109-227)||(25550487-25550603)
chr5 (128-227)||(24266955-24267053)
chr5 (128-227)||(24343586-24343684)
chr5 (7-190)||(20563971-20564142)
chr5 (7-199)||(20858713-20858892)
chr5 (28-227)||(18208151-18208347)
chr5 (11-226)||(36175135-36175348)
chr5 (2-225)||(15690780-15691000)
chr5 (56-226)||(22755522-22755694)
chr5 (1-190)||(16523676-16523852)
chr5 (142-227)||(15469936-15470021)
chr5 (128-225)||(17171553-17171650)
chr5 (128-225)||(34487640-34487736)
chr5 (1-199)||(28664802-28664987)
chr5 (124-190)||(20549700-20549766)
chr5 (129-227)||(24852173-24852271)
chr5 (118-199)||(17315090-17315171)
chr5 (128-227)||(18937748-18937846)
chr5 (130-225)||(19086181-19086276)
chr5 (128-227)||(25402337-25402436)
chr5 (129-226)||(17185464-17185561)
chr5 (126-225)||(26120867-26120965)
chr5 (143-225)||(19283870-19283952)
chr5 (126-183)||(24260560-24260617)
chr5 (1-89)||(20549591-20549679)
chr5 (127-227)||(26121323-26121422)
chr5 (129-227)||(24656854-24656952)
chr5 (128-181)||(17635325-17635378)
chr5 (127-227)||(26110461-26110560)
chr5 (2-85)||(26121198-26121280)
chr5 (174-227)||(15544051-15544103)
chr5 (29-86)||(18937889-18937945)
chr5 (174-227)||(23380303-23380356)
chr5 (144-225)||(24167600-24167681)
chr5 (56-89)||(24260655-24260688)
chr5 (169-230)||(28253278-28253338)
chr5 (202-230)||(17769469-17769497)
chr5 (230-270)||(39434405-39434445)
[»] scaffold0056 (2 HSPs)
scaffold0056 (7-227)||(21277-21484)
scaffold0056 (1-227)||(24987-25200)
[»] scaffold1869 (1 HSPs)
scaffold1869 (2-228)||(263-489)
[»] scaffold0155 (1 HSPs)
scaffold0155 (2-221)||(35868-36088)
[»] scaffold0016 (2 HSPs)
scaffold0016 (103-226)||(3533-3655)
scaffold0016 (174-227)||(12109-12162)
[»] scaffold0671 (1 HSPs)
scaffold0671 (1-187)||(482-656)
[»] scaffold0622 (1 HSPs)
scaffold0622 (128-227)||(728-828)
[»] scaffold0008 (4 HSPs)
scaffold0008 (80-227)||(48146-48289)
scaffold0008 (103-199)||(234369-234465)
scaffold0008 (156-225)||(54862-54931)
scaffold0008 (2-86)||(55003-55086)
[»] scaffold0005 (1 HSPs)
scaffold0005 (32-227)||(168203-168397)
[»] scaffold0263 (1 HSPs)
scaffold0263 (1-165)||(15708-15872)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-230)||(35534-35763)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-190)||(76455-76630)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-113)||(72123-72236)
[»] scaffold0650 (1 HSPs)
scaffold0650 (129-227)||(6287-6385)
[»] scaffold0019 (2 HSPs)
scaffold0019 (128-226)||(181706-181803)
scaffold0019 (129-226)||(11241-11338)
[»] scaffold0427 (2 HSPs)
scaffold0427 (128-191)||(2818-2881)
scaffold0427 (29-89)||(2720-2777)
[»] scaffold0062 (1 HSPs)
scaffold0062 (41-199)||(43140-43298)
[»] scaffold0838 (1 HSPs)
scaffold0838 (128-226)||(2371-2469)
[»] scaffold0832 (1 HSPs)
scaffold0832 (128-226)||(2402-2500)
[»] scaffold0653 (1 HSPs)
scaffold0653 (129-227)||(4484-4582)
[»] scaffold0043 (1 HSPs)
scaffold0043 (128-226)||(89854-89951)
[»] scaffold0386 (3 HSPs)
scaffold0386 (1-89)||(5978-6066)
scaffold0386 (1-89)||(6588-6676)
scaffold0386 (105-189)||(6680-6764)
[»] scaffold0024 (2 HSPs)
scaffold0024 (25-89)||(39724-39786)
scaffold0024 (148-227)||(39584-39663)
[»] scaffold0111 (1 HSPs)
scaffold0111 (10-89)||(3772-3851)
[»] scaffold0048 (1 HSPs)
scaffold0048 (129-227)||(78594-78692)
[»] scaffold0042 (1 HSPs)
scaffold0042 (127-225)||(29909-30006)
[»] scaffold0090 (1 HSPs)
scaffold0090 (138-222)||(7422-7506)
[»] scaffold0672 (1 HSPs)
scaffold0672 (142-225)||(1736-1819)
[»] scaffold0136 (1 HSPs)
scaffold0136 (157-227)||(15494-15564)
[»] scaffold0001 (3 HSPs)
scaffold0001 (11-89)||(69218-69296)
scaffold0001 (143-227)||(69082-69165)
scaffold0001 (136-227)||(81487-81577)
[»] scaffold0957 (2 HSPs)
scaffold0957 (143-227)||(3153-3236)
scaffold0957 (25-89)||(3283-3346)
[»] scaffold0351 (2 HSPs)
scaffold0351 (128-226)||(277-379)
scaffold0351 (11-89)||(5647-5724)
[»] scaffold0002 (1 HSPs)
scaffold0002 (56-166)||(94584-94695)


Alignment Details
Target: chr8 (Bit Score: 158; Significance: 9e-84; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 29382235 - 29382460
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||||  ||||| ||||||||||||||||||||||||||||||||||  ||||||||     
T  29382235 gggggtttgaagaatcctaaccactgcttacttttctgcaaccaaaaataggtacacttgctatgttgcaaacagataaaaattgcaagctttctaacca 29382334  T
Q  102 ttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatat 201  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||  ||||||||||||||||||||||||| |||||      
T  29382335 ttaacttttatatcgtcaaacttacaaaaataagtaacgcaaattgtttggatgaaacgacaatccctgtggatacgatactctacttatcactttatta 29382434  T
Q  202 cttggtaaacgatttggtacacttgc 227  Q
    ||||||||||||||||||||||||||    
T  29382435 cttggtaaacgatttggtacacttgc 29382460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 24114158 - 24114381
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||||||||||||||| | |||||||||||||    |||||||| ||||||||||||| || ||||||||||||||||||||||   || ||||||    
T  24114158 ggggattcgaagaatcctaaccgctgcttacttttcagataccaaaac-aggtaaacttgctctgctgcaaacagataaaaattgcaacctttataaccc 24114256  T
Q  102 ttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatat 201  Q
    ||| ||||||||||||||| |||||||||||||||||| | | ||||||||||||||||||||||  || |||||||||||||||||||||| |||||      
T  24114257 ttatcttttatatcgtcaa-cttacaaaaataagtaacgcaagttgtttggacgaaacgacaatccctgcggatacgatactctacttatcattttatta 24114355  T
Q  202 cttggtaaacgatttggtacacttgc 227  Q
    |||||||||| |||||||||||||||    
T  24114356 cttggtaaacaatttggtacacttgc 24114381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 24269821 - 24269598
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||||||||||||||| | |||||||||||||| ||||||||| ||||||||||  || ||||||||||||||||| |||||||   ||| ||| |    
T  24269821 ggggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacta-ctctgttgcaaacagataaagattgcaactattcaaactc 24269723  T
Q  102 ttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatat 201  Q
    |||  ||||||| |||||||||||||||||||| |||   |||||||||||||||||||||||||  |||||||||||||||||||||| || |||||      
T  24269722 ttattttttataccgtcaaacttacaaaaataaataatgtgaattgtttggacgaaacgacaatccctgtggatacgatactctactta-cactttatta 24269624  T
Q  202 cttggtaaacgatttggtacacttgc 227  Q
    |||||||||  |||||||||||||||    
T  24269623 cttggtaaataatttggtacacttgc 24269598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 26 - 225
Target Start/End: Original strand, 18448440 - 18448639
Alignment:
Q  26 tgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagactt-ctaacccttaa-cttttatatcgtcaaact 123  Q
    ||||||||||| | ||||||||| ||||||| |||||| ||||||||||||||||||| |||||||||| |||||| || | ||||||||||||||| ||    
T  18448440 tgcttacttttatgcaaccaaaaacaggtaa-cttgctctgttgcaaacagataaaaactgcaagactttctaaccatttatcttttatatcgtcaa-ct 18448537  T
Q  124 tacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacac 223  Q
    || |||||||||||||  ||||||||||||| |||||||||||| | | |||||||| ||||| |||| | |||||  ||||||||| ||||||||||||    
T  18448538 tataaaaataagtaacgagaattgtttggacaaaacgacaatctctattgatacgatgctctaattattactttattacttggtaaatgatttggtacac 18448637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 17101790 - 17101990
Alignment:
Q  13 gaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttat 112  Q
    ||||||||| |||||||||||||| | ||| ||||| |||||||||||||| |||||||||||||||||||||| ||           | || |||||||    
T  17101790 gaatcctaaccactgcttacttttttgcaatcaaaaacaggtaaacttgctctgttgcaaacagataaaaattggaa-----------cctatcttttat 17101878  T
Q  113 atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacg 212  Q
    | |||||| |||||||| |||||||||||  |||||||||| ||||||||||||  | ||||||||||||||||||||||| |||||  |||||||||||    
T  17101879 accgtcaa-cttacaaatataagtaacacatattgtttggatgaaacgacaatccctatggatacgatactctacttatcactttattacttggtaaacg 17101977  T
Q  213 atttggtacactt 225  Q
    ||||| |||||||    
T  17101978 atttgatacactt 17101990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 25 - 215
Target Start/End: Complemental strand, 17509446 - 17509258
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttatatcgtcaaactt 124  Q
    |||||||||||| | |||| ||||| ||||||||||||| | |||||||||| | ||||||||||| ||| |||||||||| ||||||| |||||| |||    
T  17509446 ctgcttacttttttgcaacaaaaac-aggtaaacttgctctattgcaaacaggtgaaaattgcaagtcttttaacccttaatttttataccgtcaa-ctt 17509349  T
Q  125 acaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatt 215  Q
    | ||||||||||||   |||||||||||||||||  ||||||  |||||||| |||||||||||||||| |||||  |||||| |||||||    
T  17509348 ataaaaataagtaaagagaattgtttggacgaaagaacaatccatgtggatatgatactctacttatcactttattacttggttaacgatt 17509258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 28 - 226
Target Start/End: Complemental strand, 25226334 - 25226137
Alignment:
Q  28 cttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagactt-ctaacccttaacttttatatcgtcaaacttac 126  Q
    ||||||||| ||||||||| || | ||||||||||| | ||||||||| |||||||||| ||||||| |||||||||| |||||||||| |||||||||     
T  25226334 cttacttttttacaaccaagac-atgtaaacttgctctattgcaaacatataaaaattggaagactttctaaccctta-cttttatatcttcaaacttat 25226237  T
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||| ||||| | ||||||||||| ||||| | ||||  |||  ||||||||||| |||||||| |||||  |||| |||||||||| |||||||||    
T  25226236 aaaaatatgtaacgcaaattgtttggaggaaacaataatccctgtatatacgatactcaacttatcactttattacttgataaacgatttagtacacttg 25226137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 25 - 199
Target Start/End: Complemental strand, 27659637 - 27659473
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttatatcgtcaaactt 124  Q
    ||||||| |||||| |||| |||| |||||||||||||| | ||||||| |||| ||||||||||         |||||| ||||||||||||||| |||    
T  27659637 ctgcttaattttctgcaacaaaaaacaggtaaacttgctcttttgcaaatagattaaaattgcaa---------cccttatcttttatatcgtcaa-ctt 27659548  T
Q  125 acaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||||||||||||||| || | ||||||||||||||||||||| |||| ||||||||||||||||||||| |||||    
T  27659547 acaaaaataagtaactcggaatgtttggacgaaacgacaatccttgtagatacgatactctacttatcactttat 27659473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 13314865 - 13315089
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||||||| ||| |  ||||||||||||| ||||||||| |||||||| ||| |  |||||||||| |||||||||||||  || |||||     
T  13314865 aggggattcgaagaatcttaaccgttgcttacttttctgcaaccaaaaacaggtaaatttgttcagttgcaaacatataaaaattgcaactct-ctaacg 13314963  T
Q  101 cttaacttttat---atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaattt 197  Q
     ||| |||||||   |||||||| |||| |||| |||||||| ||||||||||||||||||| | ||||  ||||||||||||||| ||||||||| |||    
T  13314964 tttatcttttattatatcgtcaa-cttataaaa-taagtaacgcgaattgtttggacgaaacaaaaatccatgtggatacgatactatacttatcacttt 13315061  T
Q  198 atatcttggtaaacgatttggtacactt 225  Q
    ||  ||||||||| ||| ||||||||||    
T  13315062 attacttggtaaatgatctggtacactt 13315089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 2 - 271
Target Start/End: Original strand, 24110544 - 24110807
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| |||||| |||||||| | |||||||||||||| ||||||||| ||| ||||||| || |||||||||||||| ||||||||||   |||||||||    
T  24110544 ggggattcgaataatcctaacccctgcttacttttctgcaaccaaaa-cagataaacttcctctgttgcaaacagat-aaaattgcaacttttctaaccc 24110641  T
Q  102 ttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatat 201  Q
    |||  |||||||||||| |||||||||||            | |||||||||| ||| || |||| |||||||||||||||||||||||||| |||||      
T  24110642 ttatgttttatatcgtc-aacttacaaaa------------acttgtttggacaaaatgaaaatcgttgtggatacgatactctacttatcattttatta 24110728  T
Q  202 cttggtaaacgatttggtacacttgcat---------atcaattttttggcgccgttgacgagtattgttgatattttc 271  Q
    ||||||||| |||||| |||||||||||         ||||| ||||||||||||||| || | |||||||||||||||    
T  24110729 cttggtaaatgatttgatacacttgcataatccgcacatcaagtttttggcgccgttgtcggggattgttgatattttc 24110807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 25 - 227
Target Start/End: Complemental strand, 14528350 - 14528149
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact-------tttatatcgt 117  Q
    |||||||||||||| |||||||| |||||||| |||||| |||||||||||| ||||||||||||    ||||||||||||||       ||||||||||    
T  14528350 ctgcttacttttctgcaaccaaa-ccaggtaa-cttgctttgttgcaaacagctaaaaattgcaatc--tctaacccttaactattttattttatatcgt 14528255  T
Q  118 caaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttg 217  Q
    ||   |    ||||||||||||  || ||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||  ||||||||||||||||    
T  14528254 cagttt----aaaataagtaacgtgagttgtttggacgaaacgacaatctatgtggatacgatactctacgtatcactttattacttggtaaacgatttg 14528159  T
Q  218 gtacacttgc 227  Q
    | ||||||||    
T  14528158 gcacacttgc 14528149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 5851039 - 5850942
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||||||||| |||||||||  ||||||||||||| ||||||||||||||||||||||||| |||||  |||||||||||||| ||||||||||    
T  5851039 aaataagtaacacggattgtttggttgaaacgacaatctatgtggatacgatactctacttatcactttattacttggtaaacgattaggtacacttg 5850942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 23893097 - 23893266
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaactttt 110  Q
    |||||||||||  |||  |||||||||| |||||||||| ||||||| ||||| |||||||||||||||||||||||||             || |||||    
T  23893097 aagaatcctaactactagttacttttctgcaaccaaaac-aggtaaatttgctttgttgcaaacagataaaaattgcaac------------tatctttt 23893183  T
Q  111 atatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatca 193  Q
    ||| |||||||||||||||||||||||||| |||||||| |||| |||  ||||||| ||| |||| ||||||||||||||||    
T  23893184 ataccgtcaaacttacaaaaataagtaacaagaattgttcggacaaaagaacaatctatgttgatatgatactctacttatca 23893266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 34497329 - 34497115
Alignment:
Q  13 gaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccctt-aact---- 107  Q
    ||||||||| | |||||||||||||| ||| |||| |||||||| | |||||||||||||| |||||||||||||||    |||||||||| ||||        
T  34497329 gaatcctaaccgctgcttacttttctgcaagcaaa-ccaggtaa-catgctatgttgcaaaaagataaaaattgcaatc--tctaaccctttaactcttt 34497234  T
Q  108 ---tttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatctt 204  Q
       |||||||||||||  |    ||||||||||||  | |||||||||||||||||||| ||| | |||||||||||||||||| |||| |||||  |||    
T  34497233 tattttatatcgtcaattt----aaaataagtaacgtggattgtttggacgaaacgacagtctctatggatacgatactctactaatcactttattactt 34497138  T
Q  205 ggtaaacgatttggtacacttgc 227  Q
    ||||||||||||| || ||||||    
T  34497137 ggtaaacgatttgatagacttgc 34497115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 16404126 - 16403952
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||||||||||| | ||||||| |||||| || ||||||  ||||||| | ||| ||||||||||| |||||||||||||  |            
T  16404126 aggggattcgaagaatcctaaccgctgcttatttttctgcagccaaaat-aggtaaattcgctctgttgcaaacaaataaaaattgcaactc-------- 16404036  T
Q  101 cttaacttttatatcgtcaaa-cttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctac 187  Q
        ||||||||| ||| ||| ||||||||||||||||||| |||||||| |||||||| |||||||  |||||||||||||||||||    
T  16404035 ----acttttataccgtgaaaacttacaaaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctac 16403952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 17976717 - 17976619
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||  |||| ||| | |||||||||| ||||||||||||||||||||||||||||||| |||||  |||| |||| ||||||| ||||||||    
T  17976717 aaataagtaatgcgaaatgtgtagacgaaacgaaaatctttgtggatacgatactctacttatcactttattacttgataaatgatttggcacacttgc 17976619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 24904731 - 24904633
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||   ||||||||| |||||||||||||||  |||||||| |||||||||||||||| |||||   |||||||| ||||||||||||||||    
T  24904731 aaataagtaatgtgaattgtttagacgaaacgacaatcactgtggatatgatactctacttatcactttattatttggtaaatgatttggtacacttgc 24904633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 227
Target Start/End: Complemental strand, 15238896 - 15238799
Alignment:
Q  130 aataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||| |||||||||| ||||||||||||||   ||||||||||||| ||||||||||| ||| |  |||||||||| ||||| |||||||||    
T  15238896 aataagtaacgcgaattgtttagacgaaacgacaattcatgtggatacgataatctacttatcattttcttacttggtaaacaatttgatacacttgc 15238799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 2 - 189
Target Start/End: Complemental strand, 13698078 - 13697893
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||| |||| || ||| |||||||||||||||| ||||||||  ||||||| |||||| ||||||||| |||||||||||||||    ||||||||    
T  13698078 ggggattcaaagagtcataatcactgcttacttttctgcaaccaaa--caggtaa-cttgctctgttgcaaagagataaaaattgcaatc--tctaaccc 13697984  T
Q  102 ttaact-------tttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactt 189  Q
    ||| ||       ||||||||||||| ||||   ||||||||||| |   ||||||||||||||||| |||| ||||||||||||||||||||||    
T  13697983 ttatctcttgtattttatatcgtcaa-ctta---aaataagtaacgcaggttgtttggacgaaacgaaaatccttgtggatacgatactctactt 13697893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 107 - 227
Target Start/End: Original strand, 30806475 - 30806596
Alignment:
Q  107 ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtgga-----tacgatactctacttatcaatttatat 201  Q
    |||||||||||||||||    |||||||||||| | ||||||||||| |||||||||||| |||||||     ||||||||||||||||||| |||||      
T  30806475 ttttatatcgtcaaact----aaaataagtaacgcaaattgtttggatgaaacgacaatccttgtggactggatacgatactctacttatcactttatta 30806570  T
Q  202 cttggtaaacgatttggtacacttgc 227  Q
    |||  ||||||||||| |||||||||    
T  30806571 cttaataaacgatttgatacacttgc 30806596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 30783772 - 30783835
Alignment:
Q  159 cgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtaca 222  Q
    ||||||||| ||||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  30783772 cgacaatctatgtggatacgatactctacttatcactttattacttggtaaacgatttggtaca 30783835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 2637697 - 2637603
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtaca 222  Q
    ||||||||||||  || |||||| |||||||||||||||  ||||||||||||||||||||||||| |||||  |||| ||||| ||||| ||||    
T  2637697 aaaataagtaacgggagttgtttagacgaaacgacaatccatgtggatacgatactctacttatcactttattacttgataaacaatttgataca 2637603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 29 - 227
Target Start/End: Complemental strand, 6885155 - 6884958
Alignment:
Q  29 ttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact-tttat---atcgtcaaactt 124  Q
    |||| ||||| ||||||||| ||||||| ||| || | || ||||||||||||||||||||  ||   |||||||| || |||||   ||||||||||||    
T  6885155 ttacatttctgcaaccaaaaacaggtaa-cttactctattacaaacagataaaaattgcaaatctctaaacccttatctctttattttatcgtcaaactt 6885057  T
Q  125 acaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacact 224  Q
    |   ||||||||| | | | ||||||||||||||||||||||  ||| |||||||||||| |||||||| |||||  || |||| ||||||| |||||||    
T  6885056 a---aaataagtagcgcaagttgtttggacgaaacgacaatccatgtagatacgatactc-acttatcactttattactgggtacacgatttagtacact 6884961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 226
Target Start/End: Complemental strand, 19786947 - 19786732
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa-----gacttctaacccttaa 105  Q
    |||| |||||| || || || ||||||||||| ||||| || |||| |||||| ||||||||||||||||||||| |||      |||| || | |||      
T  19786947 aagagtcctaaccattgtttccttttctacaatcaaaaacatgtaa-cttgctctgttgcaaacagataaaaattacaatctctaacttttatctctttt 19786849  T
Q  106 cttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttg 205  Q
     ||||||||| || |||||   |||| ||||||||||| ||||||||||||||||||| ||  | |||||| |||||| ||||| ||| |||||  ||||    
T  19786848 attttatatcatc-aactt---aaaacaagtaacacgagttgtttggacgaaacgacagtccctatggatatgatactttacttgtcactttattacttg 19786753  T
Q  206 gtaaacgatttggtacacttg 226  Q
    ||||||||||||||| |||||    
T  19786752 gtaaacgatttggtatacttg 19786732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 14075692 - 14075599
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtaca 222  Q
    ||||||||||| |  |||||||||  ||||||||||||  ||||||||||||| ||||||||||| ||| |  ||||||||| |||||||||||    
T  14075692 aaataagtaacgcacattgtttggttgaaacgacaatccatgtggatacgatagtctacttatcactttcttacttggtaaaagatttggtaca 14075599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 186
Target Start/End: Complemental strand, 18569256 - 18569107
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttatatcgtc-aaact 123  Q
    |||||||||||||| |||||||||| || |||||| |||||||||||||||||||||||| ||||             | ||||||||| |||| |||||    
T  18569256 ctgcttacttttctgcaaccaaaacaag-taaactcgctatgttgcaaacagataaaaatagcaa------------ctcacttttataccgtcaaaact 18569170  T
Q  124 tacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactcta 186  Q
    ||||||||||||||||| ||||| ||  ||||||| |||||||  | |||||| |||||||||    
T  18569169 tacaaaaataagtaacaagaatttttaagacgaaaggacaatccctatggatatgatactcta 18569107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 2 - 226
Target Start/End: Original strand, 25182302 - 25182526
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||| |||| |||||| ||||| || ||||||| ||||||||| ||||||| |||||| ||||||||| ||||||||||||||  |  ||||||||    
T  25182302 ggggattcaaagagtcctaaccactgtttccttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgca--atctctaaccc 25182398  T
Q  102 ttaac-------ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaa 194  Q
    ||| |       |||||||||||| |||||   |||||||||||| | |   |||| ||||||| |||||||  |||| |||||||||||||||| |||     
T  25182399 ttatctcttttattttatatcgtc-aactt---aaaataagtaacgcaagcagtttagacgaaatgacaatccatgtgaatacgatactctacttgtcac 25182494  T
Q  195 tttatatcttggtaaacgatttggtacacttg 226  Q
    |||||   ||||||||  ||||||| ||||||    
T  25182495 tttattatttggtaaataatttggtccacttg 25182526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 26394573 - 26394644
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaac 74  Q
    |||| ||||||||||||||| |  ||||||||||||| ||||||||| |||||||||||||| ||||||||||    
T  26394573 ggggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaa-caggtaaacttgctttgttgcaaac 26394644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 30122156 - 30122253
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||  |||||||||||||| ||| |||||||  |||||||| ||||||||||||| || |||||  ||||| ||  ||||||||||||||||    
T  30122156 aaataagtaatgcgaattgtttggacaaaatgacaatccatgtggatatgatactctactta-cactttattacttggaaagtgatttggtacacttgc 30122253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 24645065 - 24644984
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaa 83  Q
    |||| ||| |||| |||| || ||||||||||||||| ||||||||| |||||||  ||| ||||||||||| |||||||||    
T  24645065 ggggattcaaagattccttaaaactgcttacttttctgcaaccaaaaacaggtaactttgttatgttgcaaatagataaaaa 24644984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 221
Target Start/End: Original strand, 44011048 - 44011116
Alignment:
Q  152 gacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtac 221  Q
    |||||||||||||||  |||||||||||||||||||||| || |||||  ||| ||||||||||||||||    
T  44011048 gacgaaacgacaatccatgtggatacgatactctactta-cactttattacttcgtaaacgatttggtac 44011116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 44010897 - 44010984
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||||||||||||||| ||| | || |||||| |||| ||||||||| || || |||||| | ||||||||||| |||||||||||||    
T  44010897 agggggttcgaagaatcttaaccgctacttactcttctgcaaccaaaaacatgt-aacttgttctgttgcaaacatataaaaattgcaa 44010984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 7983781 - 7983720
Alignment:
Q  26 tgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||||||||||| |||||||| ||||| || |||||||||| |||||||||||||||||||||    
T  7983781 tgcttacttttctgcaaccaaa-ccaggcaa-cttgctatgtcgcaaacagataaaaattgcaa 7983720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 209
Target Start/End: Complemental strand, 21314723 - 21314641
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaa 209  Q
    |||||||||||||  | |||||||| ||||||||| ||||  ||| |||||||||| |||||||||| |||||  ||||||||    
T  21314723 aaaaataagtaacgagtattgtttgcacgaaacgaaaatccctgtagatacgatacactacttatcactttattacttggtaa 21314641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Complemental strand, 26008077 - 26008023
Alignment:
Q  173 gatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||| ||||||||||||||| |||||  ||||||||| ||||||||||||||||    
T  26008077 gataccatactctacttatcactttattacttggtaaatgatttggtacacttgc 26008023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 24119810 - 24119866
Alignment:
Q  169 tgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||||| |||||||||||| || |||||| ||||||||||||||||| |||||||    
T  24119810 tgtggatacaatactctactta-cactttataacttggtaaacgatttggcacacttg 24119866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 24644935 - 24644835
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgca 228  Q
    ||||||||||  |||||| ||||||  |||||| ||||  ||||||||| |||||||||||| || |||||  |||||||||  |||||| |||||||||    
T  24644935 aaataagtaatgcgaattatttggaaaaaacgataatccatgtggatacaatactctactta-cactttattacttggtaaataatttggcacacttgca 24644837  T
Q  229 ta 230  Q
    ||    
T  24644836 ta 24644835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 139
Target Start/End: Complemental strand, 19264233 - 19264130
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttatatcgtcaaactt 124  Q
    |||||||| ||| | |||||||||  || |||||||||| ||||||||| ||||||||||| |||           ||||||||||||| | ||||||||    
T  19264233 ctgcttaccttttttcaaccaaaaatagataaacttgctctgttgcaaaaagataaaaattacaa-----------cttaacttttataacatcaaactt 19264145  T
Q  125 acaaaaataagtaac 139  Q
    |||||||||||||||    
T  19264144 acaaaaataagtaac 19264130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 31288454 - 31288360
Alignment:
Q  130 aataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    ||||| |||| |||||  |||||  |||| |||||||  | ||||||||||||| |||||| || |||||  ||||||||||||||||||||||||    
T  31288454 aataattaacgcgaatgatttggttgaaaagacaatccctatggatacgatactttactta-cactttattacttggtaaacgatttggtacactt 31288360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 5052962 - 5053020
Alignment:
Q  169 tgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||| |||||||||||| || |||||  |  |||||||||||||||||||||||    
T  5052962 tgtggatacaatactctacttagcactttattacccggtaaacgatttggtacacttgc 5053020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 188
Target Start/End: Complemental strand, 14626244 - 14626069
Alignment:
Q  12 agaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaactt--- 108  Q
    ||||||||||   |||||||||||||| |||||||||  |||||||| |||| |  | |||||| |||||||||||||  | |||||||||||  ||       
T  14626244 agaatcctaactgctgcttacttttctgcaaccaaaaaaaggtaaacatgctctaatccaaacacataaaaattgcaactc-tctaacccttatatttta 14626146  T
Q  109 ttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctact 188  Q
    ||||||| || ||||   ||||||||||||||| | |||||||||||||| | |||||  | |||||| ||||| |||||    
T  14626145 ttatatcttc-aact--aaaaaataagtaacacaagttgtttggacgaaaagtcaatccctatggataggataccctact 14626069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 30122050 - 30122114
Alignment:
Q  23 cactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||||||||||||||| |||||||||  |||| ||||| || |||| ||||||||||||||||||||    
T  30122050 cactgcttacttttctgcaaccaaaa-taggt-aacttactctgttacaaacagataaaaattgcaa 30122114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 155; Significance: 5e-82; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 13909079 - 13908854
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagactt-ctaacc 100  Q
    |||| ||| ||||||||||| | |||||||||||| | ||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  13909079 ggggattcaaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaagactttctaacc 13908980  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttata 200  Q
     ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||     
T  13908979 ttta-cttttatatcgtcaaaattacaaaaataagtaacacgaattgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttatt 13908881  T
Q  201 tcttggtaaacgatttggtacacttgc 227  Q
     ||||||||||||||||||||||||||    
T  13908880 acttggtaaacgatttggtacacttgc 13908854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 28 - 226
Target Start/End: Complemental strand, 15164964 - 15164768
Alignment:
Q  28 cttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttatatcgtcaaacttaca 127  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||||| |||||||||||||  || |||||||||||||||||||||||||||||||||    
T  15164964 cttacttttctgcaaccaaaac-aggtaaacttgctctgttgcaaacaaataaaaattgcaactct-ctaacccttaacttttatatcgtcaaacttaca 15164867  T
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||||||| | |||||||||||||||| |||||||  ||||||||||||||||| ||||| |||| ||  |||||||||||||||||||||||||    
T  15164866 aaaataagtaacgcaaattgtttggacgaaatgacaatccctgtggatacgatactctgcttattaattgattacttggtaaacgatttggtacacttg 15164768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 44 - 223
Target Start/End: Original strand, 16730316 - 16730494
Alignment:
Q  44 caaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttatatcgtcaaacttacaaaaataagtaacacga 143  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||   |||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  16730316 caaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaact-ttctaacccttaacttttatattgtcaaacttacaaaaataagtaacgcga 16730414  T
Q  144 attgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacac 223  Q
     ||||||||||||||||| |||| || ||||||||||||||||||||||| ||| | |||| |||| |||||| ||||||    
T  16730415 gttgtttggacgaaacgaaaatccttttggatacgatactctacttatcactttctttcttcgtaagcgatttagtacac 16730494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 7582523 - 7582299
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||| ||||||||||| ||||||||| |||||| ||||||||| |||||||||||| | | |||||||||||| ||||||||||  |  |||| |    
T  7582523 aggggattcaaagaatcctaaccactgcttatttttctgcaaccaaaaacaggtaaacttgttctattgcaaacagatgaaaattgcaaatc--ctaagc 7582426  T
Q  101 ctt--aacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaattta 198  Q
    |||  | ||||||||||||||||||||| |||||||||||  |  |||||||||||||||| ||||||  |||||||| |||||||||||||||| ||||    
T  7582425 cttttatcttttatatcgtcaaacttaccaaaataagtaatgcagattgtttggacgaaacaacaatccatgtggatatgatactctacttatcacttta 7582326  T
Q  199 tatcttggtaaacgatttggtacactt 225  Q
    |  ||||||||| ||||||||||||||    
T  7582325 ttacttggtaaatgatttggtacactt 7582299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 2 - 226
Target Start/End: Original strand, 19492586 - 19492798
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||||||||||||||| | | |||||||||||| ||||||||| || ||||||||||| ||||||||||| ||||| |||||||           |    
T  19492586 ggggattcgaagaatcctaaccgccgcttacttttctgcaaccaaaaacatgtaaacttgctgtgttgcaaacaaataaatattgcaa-----------c 19492674  T
Q  102 ttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatat 201  Q
     |||||||||||| ||||| || ||||||||||||||| ||||||||||||| |||||||||||  |||||||||||||||||||||||||  |||||      
T  19492675 ctaacttttatattgtcaacct-acaaaaataagtaacgcgaattgtttggatgaaacgacaattcttgtggatacgatactctacttatccctttatta 19492773  T
Q  202 cttggtaaacgatttggtacacttg 226  Q
    |||||||||||||||||||||||||    
T  19492774 cttggtaaacgatttggtacacttg 19492798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 26 - 227
Target Start/End: Complemental strand, 17217020 - 17216817
Alignment:
Q  26 tgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccctt--aactt---ttatatcgtcaa 120  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||   |||||||||||  | |||   ||||||| ||||    
T  17217020 tgcttacttttctacaaccaaaac-atgtaaacttgctctgttgcaaacagataaaaattgcaact-ttctaacccttttatcttgtattatatcatcaa 17216923  T
Q  121 acttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggta 220  Q
     |||||||| |||||||||  |||||||||||||||||||||||||  |||||||| |||||||||||||||| |||||  |||||||||||||||||||    
T  17216922 -cttacaaatataagtaacgagaattgtttggacgaaacgacaatccatgtggatatgatactctacttatcactttattgcttggtaaacgatttggta 17216824  T
Q  221 cacttgc 227  Q
    || ||||    
T  17216823 catttgc 17216817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 7 - 227
Target Start/End: Original strand, 13692560 - 13692768
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac 106  Q
    |||||||||||||||  ||||||||||||||| ||||||||| |||||||||||||| | || |||||  |||||||||||||           | ||      
T  13692560 ttcgaagaatcctaactactgcttacttttctgcaaccaaaaacaggtaaacttgctcttttacaaactaataaaaattgcaa-----------cctata 13692648  T
Q  107 ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttgg 206  Q
    ||||||| | |||| || |||||||||||||||||||||||||||| |||||||||||||  |||||||| |||||||||||||||| |||||  |||||    
T  13692649 ttttataccttcaacct-acaaaaataagtaacacgaattgtttggtcgaaacgacaatccatgtggatatgatactctacttatcactttattacttgg 13692747  T
Q  207 taaacgatttggtacacttgc 227  Q
    |||||||||||||||||||||    
T  13692748 taaacgatttggtacacttgc 13692768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 17709979 - 17709757
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagac-ttctaac 99  Q
    ||||| |||||||||||||||   || ||||||||| | |||||||||| ||||||||||||| ||||||||||| ||||||||| |||| | || ||||    
T  17709979 aggggattcgaagaatcctaacagctacttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacatataaaaatttcaagtctttttaac 17709881  T
Q  100 ccttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||||| |||||||||||||||| ||| |||||||||||||  |||||||   ||| |||  ||||||  | ||||||| ||||||||||||||| |||||    
T  17709880 ccttatcttttatatcgtcaaa-ttataaaaataagtaacgagaattgt---gacaaaagaacaatccctatggatacaatactctacttatcactttat 17709785  T
Q  200 atcttggtaaacgatttggtacacttgc 227  Q
      ||||||||||||||||||||||||||    
T  17709784 tacttggtaaacgatttggtacacttgc 17709757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 6 - 227
Target Start/End: Original strand, 13128752 - 13128973
Alignment:
Q  6 gttcgaagaatcctaaacactgcttacttttctacaacc-aaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccctta 104  Q
    ||||||||||| |||| | |||||||||||||| ||||| |||| |||| |||||| || |||| |||||| |||||||||||||  || ||||||||||    
T  13128752 gttcgaagaatgctaa-cgctgcttacttttctgcaaccgaaaaacaggcaaacttactctgttccaaacaaataaaaattgcaactct-ctaaccctta 13128849  T
Q  105 acttttat---atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatat 201  Q
     |||||||   || |||||   || ||||||||||||| ||| ||||||||||||||||||||||  | ||||||| ||||||||||||||| |||||      
T  13128850 tcttttattatatggtcaac--taaaaaaataagtaacgcgagttgtttggacgaaacgacaatccctatggatacaatactctacttatcattttatta 13128947  T
Q  202 cttggtaaacgatttggtacacttgc 227  Q
    ||||||||||||||||||||||||||    
T  13128948 cttggtaaacgatttggtacacttgc 13128973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 19562048 - 19562277
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttc--taa 98  Q
    ||||| |||||||||| |||| | ||| |||||||||| ||||||||| |||||||||||||| ||||||||| |||||||||||||||   ||   |||    
T  19562048 aggggattcgaagaattctaaccgctgattacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaagagataaaaattgcaa---ttaaataa 19562144  T
Q  99 ccctt--aacttttat---atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatca 193  Q
    |||||  | |||||||   |  |||||||||| |||||||||||| || ||||||||||| |||||||||||  ||||||| |||||||| |||||||||    
T  19562145 cccttttatcttttattataatgtcaaactta-aaaaataagtaatacaaattgtttggatgaaacgacaatacttgtggacacgatactttacttatca 19562243  T
Q  194 atttatatcttggtaaacgatttggtacacttgc 227  Q
     |||||  ||||||||| ||||||||||||||||    
T  19562244 ctttattacttggtaaatgatttggtacacttgc 19562277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 129 - 229
Target Start/End: Complemental strand, 20315098 - 20314998
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgca 228  Q
    ||||||||||| | |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||  |||||||||||||||||||||||||||    
T  20315098 aaataagtaacgcaaattgtttggacgaaacgacaatccttgtggatatgatattctacttatcaatttattacttggtaaacgatttggtacacttgca 20314999  T
Q  229 t 229  Q
    |    
T  20314998 t 20314998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 2 - 193
Target Start/End: Original strand, 17337009 - 17337200
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||||||||||| ||| | |||||||||||| | ||||||||| |||||||||||||| ||||| ||||||||||||||||||| |  || |||||    
T  17337009 ggggattcgaagaatcataatctctgcttacttttatgcaaccaaaaacaggtaaacttgctctgttgtaaacagataaaaattgcaa-atctcaaaccc 17337107  T
Q  102 ttaac-----ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatca 193  Q
    || ||     | |||||||||| ||||   ||||||||||||| | |||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  17337108 tttactcttttattatatcgtc-aact---aaaaataagtaacgcaaattgtttggacgaaatgacaatctctttggatacgatactctacttatca 17337200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 28 - 227
Target Start/End: Complemental strand, 17672200 - 17672002
Alignment:
Q  28 cttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact-------tttatatcgtcaa 120  Q
    ||||||||||| |||||||| |||||||| |||||| |||||||||||||||||||||||||    ||||||| ||||||       |||||||||| ||    
T  17672200 cttacttttctgcaaccaaa-ccaggtaa-cttgctctgttgcaaacagataaaaattgcaatc--tctaacctttaactcttttattttatatcgttaa 17672105  T
Q  121 acttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggta 220  Q
     ||||   ||||||||||| ||| |||||| |||||||| ||||||  ||||||||| ||||||||||||||| |||||  |||||||||||||||||||    
T  17672104 -ctta---aaataagtaacgcgagttgtttagacgaaacaacaatccatgtggatacaatactctacttatcactttattacttggtaaacgatttggta 17672009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 21323873 - 21323974
Alignment:
Q  126 caaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||  ||||   |||||||||||||| ||||||||    
T  21323873 caaaaataagtaacgcgaattgtttggacgaaacgacaatctatgtggatacgatactctactgatcacattattatttggtaaacgatttagtacactt 21323972  T
Q  226 gc 227  Q
    ||    
T  21323973 gc 21323974  T

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Target: chr4; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 107 - 225
Target Start/End: Complemental strand, 11490648 - 11490534
Alignment:
Q  107 ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttgg 206  Q
    |||||||||||||||||    |||||||||||| ||||||||||||| ||||| ||||||  ||||||||||||||||||||||||| |||||  ||||     
T  11490648 ttttatatcgtcaaact----aaaataagtaacgcgaattgtttggaagaaactacaatccctgtggatacgatactctacttatcactttattacttga 11490553  T
Q  207 taaacgatttggtacactt 225  Q
    ||||| |||||||||||||    
T  11490552 taaacaatttggtacactt 11490534  T

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Target: chr4; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 32 - 227
Target Start/End: Complemental strand, 14649089 - 14648895
Alignment:
Q  32 cttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact-------tttatatcgtcaaactt 124  Q
    ||||||||||||||||| || |||| |||||| |||||||||||||||||||||| ||    |||||||||||  |       ||||||||||||| |||    
T  14649089 cttttctacaaccaaaaacaagtaa-cttgctctgttgcaaacagataaaaattgaaatc--tctaacccttatgtcttttattttatatcgtcaa-ctt 14648994  T
Q  125 acaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacact 224  Q
    |   |||||||||||||||  | ||| || |||||||||||| | |||||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  14648993 a---aaataagtaacacgagctatttagaagaaacgacaatcct-gtggatacgatactctacttatcactttattacttggtaaacgatttggtacact 14648898  T

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Target: chr4; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 131 - 225
Target Start/End: Original strand, 13992879 - 13992973
Alignment:
Q  131 ataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    |||||||||||||||||||||||| |||||| ||||  |||||||||||||||||||||| || |||||  |||||||||| |||||||||||||    
T  13992879 ataagtaacacgaattgtttggacaaaacgaaaatccatgtggatacgatactctacttaccactttattacttggtaaacaatttggtacactt 13992973  T

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Target: chr4; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 19882738 - 19882640
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||| ||||||||||||||||||||||||||  ||| |||||||||||||||| |||| |||||  |||| |||||||||| ||||||||||    
T  19882738 aaataagtaacgcgaattgtttggacgaaacgacaatccatgttgatacgatactctactaatcactttattacttgataaacgattttgtacacttgc 19882640  T

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Target: chr4; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 17026217 - 17026394
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||||||||||| | |||||||||| ||| ||||||||| |||||||| || || ||||||||||||||||||| |||||               
T  17026217 aggggattcgaagaatcctaaccgctgcttacttgtctgcaaccaaaaacaggtaaatttactctgttgcaaacagataaaaactgcaa----------- 17026305  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
      | |||||||||  ||||||||||||||||||||||||  ||||||||   |||||| |||||||  |||| |||||||||||||||||    
T  17026306 -ctcacttttatactgtcaaacttacaaaaataagtaactagaattgttcccacgaaaggacaatccatgtgaatacgatactctactta 17026394  T

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Target: chr4; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 25121227 - 25121322
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||||||||||||| |||||| || |||||  ||||||||||||||||| ||||||    
T  25121227 aaataagtaacgcgaattgtttggacgaaaccacaatccttgtggatacgatactatactta-cactttattacttggtaaacgatttggaacactt 25121322  T

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Target: chr4; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 29 - 227
Target Start/End: Original strand, 20829640 - 20829837
Alignment:
Q  29 ttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaactttta----tatcgtcaaactt 124  Q
    |||| ||||| ||||||||| || |||| |||||||||| |||||||||||||||||| ||  ||  ||||||||| |||||     ||||||| |||||    
T  20829640 ttacatttctgcaaccaaaaacaagtaa-cttgctatgtcgcaaacagataaaaattgtaaatctcttaacccttatctttttattttatcgtcgaactt 20829738  T
Q  125 acaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacact 224  Q
    |   ||||||||||  | |||| |||| ||||||| |||||| |||||||||| |||||| | |||||| |||||  |||||||||||||||||||||||    
T  20829739 a---aaataagtaatgcaaattttttgaacgaaacaacaatccttgtggatacaatactc-agttatcactttattacttggtaaacgatttggtacact 20829834  T

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Target: chr4; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 9052772 - 9052674
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||||  |||||||||||  ||||| |||||||||| ||||||||||||||||||| || |||||  ||||||||| ||||||||||||||||    
T  9052772 aaaataagtaacgtgaattgtttggttgaaacaacaatctttgcggatacgatactctactta-cattttattacttggtaaatgatttggtacacttgc 9052674  T

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Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 12578266 - 12578365
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||| ||| | |||||||||||| |||||||||||  |||||||||||||||||| |||||| |||||   |||||||| ||||||||||||||||    
T  12578266 aaaataagaaacgcaaattgtttggacaaaacgacaatccatgtggatacgatactctaattatcactttattatttggtaaatgatttggtacacttgc 12578365  T

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Target: chr4; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 5679304 - 5679206
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||||||| ||||||||||||||||||| | | |   ||| |||||||||||||||| |||| |||||  |||||||||||||||||||||||||    
T  5679304 aaaataagtaacgcgaattgtttggacgaaacaaaagttcatgtagatacgatactctactaatcactttattacttggtaaacgatttggtacacttg 5679206  T

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Target: chr4; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 56 - 226
Target Start/End: Original strand, 8969655 - 8969819
Alignment:
Q  56 aacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaactt-ttatatcgtcaaacttacaaaaataagtaacacgaattgtttggac 154  Q
    |||||||| ||||||| | ||||| |||||||||    |||||||||||| || |||||||||||||   |||||| |||||||||||||||||||||||    
T  8969655 aacttgctctgttgcatatagatataaattgcaatc--tctaacccttaatttattatatcgtcaaa---acaaaa-taagtaacacgaattgtttggac 8969748  T
Q  155 gaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||||||||  || |||||| | ||||||||| || |||||  ||| |||||  ||||||||||||||    
T  8969749 gaaacgacaatctcagtagatacgttgctctactta-cactttattactttgtaaataatttggtacacttg 8969819  T

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Target: chr4; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 25098041 - 25097959
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||||||||||||| | |||| |||||||| |||||||||| |||||||| ||||| |||||| ||||||||||||||||||    
T  25098041 ttcgaagaatcctaaccgctgcatacttttcaacaaccaaaaacaggtaaatttgctttgttgccaacagataaaaattgcaa 25097959  T

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Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 11700571 - 11700667
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||| ||||||| ||||||||  |||||| ||||||||| ||||||||||||||||| |||||| |||||  |||||||||| ||||||||||||||    
T  11700571 aaataggtaacacaaattgtttaaacgaaaagacaatctt-gtggatacgatactctatttatcattttattacttggtaaacaatttggtacacttg 11700667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 25094780 - 25094605
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||| ||||||||||| | ||||||  ||||||||| ||||||| ||||||| | ||| |||||||||||||||||||||||||               
T  25094780 aggggattctaagaatcctaaccgctgcttgattttctacatccaaaactaggtaaattcgctttgttgcaaacagataaaaattgcaa----------- 25094692  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
      ||||||||||| ||| ||   ||||||| ||||||||| |||||||||||||||||  ||||||  |||||||| |||||||||||||    
T  25094691 -ctaacttttataccgttaa--ctacaaaattaagtaacaagaattgtttggacgaaagaacaatccatgtggatatgatactctactta 25094605  T

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Target: chr4; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 19929675 - 19929774
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||||||   | ||| |||||||||||||||  |||||||||||||||||| |||||| ||| |  ||||||||| ||||||||||||||||    
T  19929675 aaaataagtaacacgggctatttagacgaaacgacaatccatgtggatacgatactctatttatcactttgttacttggtaaatgatttggtacacttgc 19929774  T

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Target: chr4; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 24639344 - 24639415
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaa 82  Q
    ||||||||||| |||||||||||||||| ||||| ||| |||||||||||||| ||||||||||| ||||||    
T  24639344 aagaatcctaaccactgcttacttttctgcaaccgaaaacaggtaaacttgctctgttgcaaacaaataaaa 24639415  T

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Target: chr4; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 19374828 - 19374909
Alignment:
Q  143 aattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||||| || |||||  |||| |||||||||||||||||||    
T  19374828 aattgtttggacaaaacgacaatctcagtggatacgatactctactta-cattttattacttgataaacgatttggtacactt 19374909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 22175975 - 22176061
Alignment:
Q  141 cgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||||  ||| |||||||| | ||||||| ||||||||||||||| |||||  |||| |||||||||||||||||||||    
T  22175975 cgaattgtttggagaaaatgacaatctctatggatacaatactctacttatcactttattacttgataaacgatttggtacacttgc 22176061  T

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Target: chr4; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 40227992 - 40227777
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaa--ctt 108  Q
    ||||||||||| | ||||||| |||||  |||| ||||  |||||||||| ||  ||||||||||||||||||||| || || |||| ||||| |  |||    
T  40227992 aagaatcctaaccgctgcttatttttcggcaacaaaaaataggtaaacttactccgttgcaaacagataaaaattgtaa-acctctagccctttactctt 40227894  T
Q  109 tta---tatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttg 205  Q
    |||   ||||||||||||   ||||||||||||| ||||||||||||| ||||| |||||   | ||||||| ||| |  |||||||| |||||  ||||    
T  40227893 ttatattatcgtcaaact---aaaaataagtaacgcgaattgtttggatgaaactacaattcctatggatacaata-ttaacttatcactttattacttg 40227798  T
Q  206 gtaaacgatttggtacacttgc 227  Q
    || |||||||||||||||||||    
T  40227797 gt-aacgatttggtacacttgc 40227777  T

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Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 26115788 - 26116001
Alignment:
Q  10 gaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact-- 107  Q
    |||||||||||| | ||||| || ||| | |||||||||| |||||| ||| || |||||||||||||||||||||||||  ||  ||||||| ||||      
T  26115788 gaagaatcctaaccgctgctaacatttatgcaaccaaaac-aggtaa-cttactctgttgcaaacagataaaaattgcaaatctcttaaccctaaactct 26115885  T
Q  108 tttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggt 207  Q
    |||||||  |   | ||   ||||||||||| |||||||||||||| ||| |||||||| || ||||||||||||| || ||| ||  ||||  |||| |    
T  26115886 tttatattattttatttt--aaaataagtaaaacgaattgtttggaagaatcgacaatccttatggatacgatactttaatta-cacgttattacttgat 26115982  T
Q  208 aaacgatttggtacacttg 226  Q
    |||||||||||||||||||    
T  26115983 aaacgatttggtacacttg 26116001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 11933517 - 11933419
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||| ||| ||||||||||||||||||||||  |||||  ||||||||| |||||||| || ||  |||||||||||||| || ||||||||    
T  11933517 aaaataagtaacgcgagttgtttggacgaaacgacaatccatgtggtcacgatactc-acttatcacttcattacttggtaaacgattaggaacacttgc 11933419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 19092394 - 19092295
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||| |||  || ||||||||||||||||||||||  |||| || ||||||||| ||||||| |||||  |||| ||||| |||||||||||||||    
T  19092394 aaaataagcaacgtgagttgtttggacgaaacgacaatccatgtgaatgcgatactcttcttatcactttattacttgataaacaatttggtacacttgc 19092295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 112 - 225
Target Start/End: Original strand, 19636573 - 19636682
Alignment:
Q  112 tatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaac 211  Q
    ||||||||||||||   |||||||||||| |||||||||||| ||||||||||||  | | ||||| |||||||||||| || |||||  ||| || |||    
T  19636573 tatcgtcaaactta---aaataagtaacatgaattgtttggatgaaacgacaatccctatagatacaatactctacttaccactttattactttgt-aac 19636668  T
Q  212 gatttggtacactt 225  Q
    ||||||||||||||    
T  19636669 gatttggtacactt 19636682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 9737519 - 9737608
Alignment:
Q  143 aattgtttggacgaaacgacaatctttgtggatacgatactctactt-----atcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||| |||||||| ||||||  |||||||||||||||||||||     |||| |||||  ||||||||||||||||||||||||||    
T  9737519 aattgtttagacgaaactacaatccatgtggatacgatactctactttactgatcactttattacttggtaaacgatttggtacacttgc 9737608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 15047219 - 15047130
Alignment:
Q  136 taacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    |||||| | |||||| |||||||||| ||||  ||| |||||||| |||||||||||| |||||  ||||||||||||||||| ||||||    
T  15047219 taacacaagttgtttagacgaaacgaaaatccatgtagatacgatcctctacttatcactttattacttggtaaacgatttggaacactt 15047130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 15107205 - 15107294
Alignment:
Q  136 taacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    |||||| | |||||| |||||||||| ||||  ||| |||||||| |||||||||||| |||||  ||||||||||||||||| ||||||    
T  15107205 taacacaagttgtttagacgaaacgaaaatccatgtagatacgatcctctacttatcactttattacttggtaaacgatttggaacactt 15107294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 22526462 - 22526369
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtaca 222  Q
    |||||||||||||  || ||||||  |||||||||||   ||||||||||||||||||||||||| |||||   ||| ||||||||||||||||    
T  22526462 aaataagtaacacagatggtttggttgaaacgacaattcatgtggatacgatactctacttatcactttattatttgataaacgatttggtaca 22526369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 11094062 - 11093966
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    ||||||| |||  ||||||||||   ||||||||||||| |||||||| || ||||||| ||||| |||||  |||||||||||||||| |||||||    
T  11094062 aaataagcaacgtgaattgtttgattgaaacgacaatctctgtggatatgacactctacctatcattttattacttggtaaacgatttgatacactt 11093966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 11521192 - 11521288
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    ||||||||||   |||| |||| || ||||||||||||  |||| |||||||||||||||||||| |||||   ||| |||||||||||||||||||    
T  11521192 aaataagtaatgtgaatagtttagaagaaacgacaatccatgtgtatacgatactctacttatcactttattatttgataaacgatttggtacactt 11521288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 25121101 - 25121186
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||| ||||||||||||||| | |||||||||||||| ||| ||||||  ||  |||||||| ||||||||||||||| |||||||||    
T  25121101 ggggattcgaagaatcctaaccgctgcttacttttctgcaatcaaaac--gggtaacttgctctgttgcaaacagatagaaattgcaa 25121186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 12406666 - 12406753
Alignment:
Q  105 acttttatatcgtcaaa-cttacaaaaataagtaacacgaattgtttggacgaaacg-acaatctttgtggatacgatactctactta 190  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| |||||||| | ||||||  |||| | |||||| ||||||||    
T  12406666 acttttatatcgtcaaaacttacaaaaataagtaacaagaattgttcggacgaaaagaacaatccatgtgcaaacgatattctactta 12406753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 19900649 - 19900580
Alignment:
Q  157 aacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||||||| ||| ||||||||||||| || |||||  |||||||||| |||||||||||||||    
T  19900649 aacgacaatctttgtgaatatgatactctactta-cactttattacttggtaaacaatttggtacacttgc 19900580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 22357420 - 22357632
Alignment:
Q  16 tcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaag-----acttctaacccttaactttt 110  Q
    ||||||||  ||||| ||||||| ||| ||||| || |||| |||||||| ||||||||| |||||||||||||      |||  || | ||||  ||||    
T  22357420 tcctaaacgatgcttccttttctgcaatcaaaaacaagtaa-cttgctatattgcaaacaaataaaaattgcaatctctaactcttatctcttatttttt 22357518  T
Q  111 atatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacga---tactctacttatcaatttatatcttggt 207  Q
    ||||||||||  |||    ||||||||||||||| |||||  | ||||||||||||  |||||||||||   |||| ||||||||| |||||  ||||||    
T  22357519 atatcgtcaacttta----aataagtaacacgaactgtttaaatgaaacgacaatccatgtggatacgatagtactttacttatcactttattacttggt 22357614  T
Q  208 aaacgatttggtacactt 225  Q
    ||| ||||| ||||||||    
T  22357615 aaatgatttagtacactt 22357632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 24639469 - 24639535
Alignment:
Q  143 aattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaa 209  Q
    |||||||||||| |||||| ||||  ||||||||||||||||||||||||| |||||  ||||||||    
T  24639469 aattgtttggacaaaacgaaaatccatgtggatacgatactctacttatcactttattacttggtaa 24639535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 17951339 - 17951394
Alignment:
Q  171 tggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||||||||| ||||||||| ||||   |||||||||||||||||||||||||    
T  17951339 tggatacgatactttacttatcactttagtacttggtaaacgatttggtacacttg 17951394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 17955191 - 17955246
Alignment:
Q  171 tggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||||||||| ||||||||| ||||   |||||||||||||||||||||||||    
T  17955191 tggatacgatactttacttatcactttagtacttggtaaacgatttggtacacttg 17955246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 225
Target Start/End: Original strand, 12839807 - 12839877
Alignment:
Q  155 gaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    |||| ||||||| |||||||||||||||||||| ||||| |||||   ||||||| |||||| ||||||||    
T  12839807 gaaatgacaatccttgtggatacgatactctacctatcattttattaattggtaagcgattttgtacactt 12839877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 17951194 - 17951256
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||||| ||||||| |||||||| | |||||| |||||| |||||||||||||||||||||||||    
T  17951194 ctgcttgcttttctgcaaccaaatc-aggtaa-cttgctctgttgcaaacagataaaaattgcaa 17951256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 17955046 - 17955108
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||||| ||||||| |||||||| | |||||| |||||| |||||||||||||||||||||||||    
T  17955046 ctgcttgcttttctgcaaccaaatc-aggtaa-cttgctctgttgcaaacagataaaaattgcaa 17955108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 25097935 - 25097872
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
    |||||||||||||| ||||| || |||| |||  ||||||  ||||||||||||||||||||||    
T  25097935 aaaaataagtaacatgaatttttcggacaaaagaacaatccatgtggatacgatactctactta 25097872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11935283 - 11935237
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaa 47  Q
    ||||| ||||||||||||||| ||||| |||||||||| ||||||||    
T  11935283 aggggattcgaagaatcctaaccactgattacttttctgcaaccaaa 11935237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 12406576 - 12406650
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaaca 75  Q
    ||||| ||||||||||||||| | ||| ||||||| || ||||||||| |||||||| | ||| | |||||||||    
T  12406576 aggggattcgaagaatcctaaccgctgtttactttcctgcaaccaaaaacaggtaaattcgctctattgcaaaca 12406650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 19374696 - 19374772
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||||||||| || ||||||| ||||| ||||||||| ||||| |||||||| || |||||||| |||||| ||||||    
T  19374696 aagaatcctaaccaatgcttacatttctgcaaccaaaa-caggt-aacttgctttgctgcaaacatataaaatttgcaa 19374772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 9264930 - 9264966
Alignment:
Q  53 gtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||||||| || |||||||||||||||||||||||||    
T  9264930 gtaaactttctctgttgcaaacagataaaaattgcaa 9264966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 12318481 - 12318433
Alignment:
Q  179 atactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||||||| |||||  |||||| || ||||||||||||||||    
T  12318481 atactctacttatcactttattacttggttaatgatttggtacacttgc 12318433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 23080439 - 23080375
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatca 193  Q
    ||||||||||| | ||||||||||  ||||||||||||  |||| |||| ||| |||||||||||    
T  23080439 aaataagtaacgcaaattgtttggttgaaacgacaatccatgtgaatacaatattctacttatca 23080375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 145; Significance: 5e-76; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 2 - 226
Target Start/End: Original strand, 17610130 - 17610354
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||| ||||||||||| | |||||||||||||| ||||||||| |||||||||||||| ||||||||||| ||||||||| ||||  ||||||||     
T  17610130 ggggtttcaaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaacatataaaaattacaagctttctaacct 17610229  T
Q  102 ttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatat 201  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||  ||||||||||||||||||||||| | |||||      
T  17610230 ttaacttttatatcgtcaaacttacaaaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatacgatactctacttataactttatta 17610329  T
Q  202 cttggtaaacgatttggtacacttg 226  Q
    |||||||||||||||||||||||||    
T  17610330 cttggtaaacgatttggtacacttg 17610354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 15543841 - 15544065
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||||||||||||||| |  ||||||||||||| |||| |||| ||||||||||| |||||||||||||| |||||||||||||  ||| ||||||    
T  15543841 ggggattcgaagaatcctaaccgttgcttacttttctgcaacaaaaaacaggtaaacttactatgttgcaaacaaataaaaattgcaactcttttaaccc 15543940  T
Q  102 ttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatat 201  Q
    ||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||| |||||      
T  15543941 ttatcttttatatcgtcaaa-ttaaaaaaataagtaacacgaattgtttggacgaaacgacaatttccgtggatacgatactctacttatcactttatta 15544039  T
Q  202 cttggtaaacgatttggtacacttgc 227  Q
    ||||||||||||||||||||||||||    
T  15544040 cttggtaaacgatttggtacacttgc 15544065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 13 - 224
Target Start/End: Complemental strand, 16179220 - 16179010
Alignment:
Q  13 gaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttat 112  Q
    ||||||||| | |||||||||||||| |||||||||  ||||||||||||| |||||||| ||||||||||||||||||| |||||||||||  ||||||    
T  16179220 gaatcctaaccgctgcttacttttctgcaaccaaaaataggtaaacttgctctgttgcaatcagataaaaattgcaagacatctaacccttatattttat 16179121  T
Q  113 atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacg 212  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||  || || ||||||||||||||||||||||| |||||  |||| ||||||    
T  16179120 atcgtcaa-cttacaaaaataagtaacaagaattgtttggacgaaacgactttccttttggatacgatactctacttatcagtttattacttgttaaacg 16179022  T
Q  213 atttggtacact 224  Q
    ||||||||||||    
T  16179021 atttggtacact 16179010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 13 - 227
Target Start/End: Original strand, 25405516 - 25405729
Alignment:
Q  13 gaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaa-ctttta 111  Q
    ||||||||| | ||||||||||| || ||||||||| || ||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| ||||||    
T  25405516 gaatcctaaccgctgcttacttt-ctgcaaccaaaaacaagtaaacttgctctgttgcaaacaaataaaaattgcaagctttctaacccttaaactttta 25405614  T
Q  112 tatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaac 211  Q
    ||||||||| ||||||||||||||||||  ||| ||||||||||||||||||||| |||||||||||||||| ||||||||| |||||  ||||||||||    
T  25405615 tatcgtcaa-cttacaaaaataagtaacgtgaactgtttggacgaaacgacaatccttgtggatacgatactttacttatcactttattacttggtaaac 25405713  T
Q  212 gatttggtacacttgc 227  Q
    || |||||||||||||    
T  25405714 gacttggtacacttgc 25405729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 21449297 - 21449089
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac 106  Q
    ||||||||||||||| | |||||||||||||| || |||||| ||| |||||||||||||||||||||||||||||||||          ||||  || |    
T  21449297 ttcgaagaatcctaaccgctgcttacttttctgcatccaaaaacagttaaacttgctatgttgcaaacagataaaaattg----------aacc--tatc 21449210  T
Q  107 ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttgg 206  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||  |||||    
T  21449209 ttttataccgtcaaacttacaaaaataagtaacataaattgtttggccgaaacgacaatccttgtggatacgatactctacttatcactttattacttgg 21449110  T
Q  207 taaacgatttggtacacttgc 227  Q
    |||||||||||||||||||||    
T  21449109 taaacgatttggtacacttgc 21449089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 12208826 - 12208601
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||||||||||||||| | |||||||||||||| || | ||||| ||||||||||||| |||||||||||||| |||| || ||   |||||||||    
T  12208826 ggggattcgaagaatcctaaccgctgcttacttttctgcagctaaaac-aggtaaacttgctctgttgcaaacagattaaaactgaaacctttctaaccc 12208728  T
Q  102 tt--aacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||  | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||  |||||||| |||| ||||||||||| |||||    
T  12208727 ttttatcttttatatcgtcaa-cttacaaaaataagtaacgcgaattgtttggacgaaacgacaatccatgtggatatgatattctacttatcactttat 12208629  T
Q  200 atcttggtaaacgatttggtacacttgc 227  Q
      ||||||||||||||| ||||||||||    
T  12208628 tacttggtaaacgatttagtacacttgc 12208601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 21666482 - 21666693
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttct-aac 99  Q
    ||||| ||||||||||||||| || |||||||||||||||||||||||| ||||||||||| | | ||||||||||||||||||| | || ||| | |||    
T  21666482 aggggattcgaagaatcctaaccattgcttacttttctacaaccaaaac-aggtaaacttgttgtcttgcaaacagataaaaattactagtctttttaac 21666580  T
Q  100 ccttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||||| ||||||||||||||| |||| |||||||||||||  ||||||||||||||||| |||||||  ||||||||||||||||||||||||| |||||    
T  21666581 ccttatcttttatatcgtcaa-cttataaaaataagtaacgagaattgtttggacgaaaggacaatccatgtggatacgatactctacttatcactttat 21666679  T
Q  200 atcttggtaaacga 213  Q
      |||||| |||||    
T  21666680 tacttggttaacga 21666693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 17359387 - 17359162
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||||||||||| | |  ||||||||| | ||||||||| |||||||| |||||||||||| | ||||||||||||||||  || ||||||    
T  17359387 aggggattcgaagaatcctaaccgcatcttacttttatgcaaccaaaaacaggtaaatttgctatgttgccagcagataaaaattgcaactct-ctaacc 17359289  T
Q  101 cttaacttttat---atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaattt 197  Q
    |||| |||||||   |||||||| ||   |||||||||||||  ||||| |||||||||||||||||||||| |||||| ||||||| |||||||| |||    
T  17359288 cttatcttttattatatcgtcaacct---aaaaataagtaacgagaattatttggacgaaacgacaatctttatggatatgatactcaacttatcacttt 17359192  T
Q  198 atatcttggtaaacgatttggtacacttgc 227  Q
    ||  ||||||||||||||||||||||||||    
T  17359191 attacttggtaaacgatttggtacacttgc 17359162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 15 - 227
Target Start/End: Complemental strand, 29242718 - 29242519
Alignment:
Q  15 atcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttatat 114  Q
    ||||||| | || ||||||||| | |||||||||| ||||||||||||| |||||||||||||||||||||||||           | ||||||||||||    
T  29242718 atcctaaccgcttcttacttttttgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaa-----------cctaacttttatat 29242631  T
Q  115 cgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgat 214  Q
    |||||| |||||||||||| ||||| ||||||||||||| ||||||||||||  | ||||||||||||||||||||||| |||||  |||| ||||| ||    
T  29242630 cgtcaa-cttacaaaaatatgtaacgcgaattgtttggatgaaacgacaatcactatggatacgatactctacttatcactttattacttgataaacaat 29242532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 21 - 227
Target Start/End: Complemental strand, 14779771 - 14779565
Alignment:
Q  21 aacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaactttt--atatcgtc 118  Q
    |||| ||||||||||||| |||||||||| || |||||||| ||||||| ||||| |||||||||||||  ||||||||| ||  |||||  ||||||||    
T  14779771 aacattgcttacttttcttcaaccaaaacaag-taaacttgatatgttgtaaacaaataaaaattgcaacccttctaacctttttcttttttatatcgtc 14779673  T
Q  119 aaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttgg 218  Q
    || ||||||||||||| |||| |||  |||||||||||||||||||||  |||||||| ||||||||| ||||||  ||||  ||||||||| |||||||    
T  14779672 aa-cttacaaaaataaataacgcgatatgtttggacgaaacgacaatccctgtggatatgatactctaattatcacattattacttggtaaatgatttgg 14779574  T
Q  219 tacacttgc 227  Q
    |||||||||    
T  14779573 tacacttgc 14779565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 9401731 - 9401542
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||||||||||| | || ||||||||| |  ||||||||| |||||||||| || |||||||||||||||||||||||||  || ||||||    
T  9401731 aggggattcgaagaatcctaaccgctacttacttttttgtaaccaaaac-aggtaaacttactctgttgcaaacagataaaaattgcaactct-ctaacc 9401634  T
Q  101 cttaacttttatatcgtcaa--acttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
     ||| |||||||    ||||  ||||||||||||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||    
T  9401633 gttatcttttattatatcaacaacttacaaaaataagtaacgcgaattgtttggacgaaacgacaattcatgtggatacgatactctactta 9401542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 21987877 - 21988081
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaactttt 110  Q
    ||||||||| | | |||||||||||| | ||||||||| |||||||| ||||| ||||||||||| |||||||||||||           | ||||||||    
T  21987877 aagaatccttaccgctgcttacttttatgcaaccaaaaacaggtaaagttgctctgttgcaaacatataaaaattgcaa-----------cctaactttt 21987965  T
Q  111 atatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaa 210  Q
    ||| |||||  |||||||||||||||||| ||||||| |||||||||| ||||||||  | |||||||||||||||||||||| |||||   ||||||||    
T  21987966 ataccgtcag-cttacaaaaataagtaacgcgaattgattggacgaaatgacaatctccgaggatacgatactctacttatcactttattatttggtaaa 21988064  T
Q  211 cgatttggtacacttgc 227  Q
     ||||||||||||||||    
T  21988065 ggatttggtacacttgc 21988081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 18736125 - 18736339
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||||||||| | | |||| ||||||||| |||||||||  ||||||||||||| | |||||||||||||||| ||||||               
T  18736125 aggggattcgaagaatccttaccgctgcctacttttctgcaaccaaaaataggtaaacttgctctattgcaaacagataaaatttgcaa----------- 18736213  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttata 200  Q
    | ||| ||||||| |||||| || |||||||||||||||   ||||||||| ||||||||||||||  |||||||||||||| |||||||||| |||||     
T  18736214 cctaaattttataccgtcaacct-acaaaaataagtaacggaaattgtttgaacgaaacgacaatccctgtggatacgatacactacttatcactttatt 18736312  T
Q  201 tcttggtaaacgatttggtacacttgc 227  Q
     |||| |||||||||||||||||||||    
T  18736313 acttgttaaacgatttggtacacttgc 18736339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 26 - 225
Target Start/End: Original strand, 31235947 - 31236145
Alignment:
Q  26 tgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttat---atcgtcaaac 122  Q
    ||||||||||| | ||||||||| || ||||||||||| ||||||||| |||||||||||||||  || ||||||||||  ||||||   |||||||| |    
T  31235947 tgcttacttttatgcaaccaaaaacaagtaaacttgctctgttgcaaagagataaaaattgcaactct-ctaacccttatattttattatatcgtcaa-c 31236044  T
Q  123 ttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtaca 222  Q
    |||  |||||||||||| |||||| ||||||| |||||||||||||||| ||||  ||||||| ||||||| |||||  ||| |||||||||| ||||||    
T  31236045 tta--aaaataagtaacgcgaattatttggacaaaacgacaatctttgtagatataatactctgcttatcactttattacttagtaaacgattcggtaca 31236142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 21334592 - 21334818
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagat-aaaaattgcaagacttctaacc 100  Q
    |||| ||||||||||||||| | ||| |||||||||| |||||||||  |||| |||||||||| |||||||||||| |||||||| |||||||  || |    
T  21334592 ggggattcgaagaatcctaaccgctgtttacttttcttcaaccaaaaataggt-aacttgctattttgcaaacagataaaaaattgtaagactttcaaac 21334690  T
Q  101 c--ttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaattta 198  Q
    |  ||| ||||||||||||| |||||| |||||||||||||  |||||||||||| |||| ||||||   |  |||||||||||| ||||||||| ||||    
T  21334691 catttatcttttatatcgtc-aacttaaaaaaataagtaacgagaattgtttggaagaaatgacaattcctccggatacgatactatacttatcacttta 21334789  T
Q  199 tatcttggtaaacgatttggtacacttgc 227  Q
    |  |||| |||| |||||| |||| ||||    
T  21334790 ttacttgataaatgatttgatacatttgc 21334818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 18825869 - 18825656
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||| ||||||||| | | ||||||||||||||||||||||||| || |||| ||||| ||||| |||||||||||||||||||               
T  18825869 aggggattcaaagaatccttatcgctgcttacttttctacaaccaaaacaag-taaatttgctttgttgtaaacagataaaaattgcaa----------- 18825782  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttata 200  Q
    |||||||||| |||||||||||||| |||| ||||||||   ||||||| | || ||| ||||| | |||||||||||||||| ||||||||| |||||     
T  18825781 cttaacttttgtatcgtcaaacttataaaattaagtaacgaaaattgttcgaactaaaggacaacccttgtggatacgatactttacttatcactttatt 18825682  T
Q  201 tcttggtaaacgatttggtacacttgc 227  Q
     |||||| ||||| |||||||||||||    
T  18825681 acttggtcaacga-ttggtacacttgc 18825656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 7 - 227
Target Start/End: Original strand, 16069441 - 16069649
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaa-ttgcaagacttctaacccttaa 105  Q
    |||||||||||||||   |||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||| ||||||          |||| |    
T  16069441 ttcgaagaatcctaactgctgcttacttttctacaaccaaaa-caggtaaacttgctctgttgcaagcagataaaaatttgcaa----------cctt-a 16069528  T
Q  106 cttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttg 205  Q
    |||||||| || ||||||||||||||||||||||| ||||||||   ||||||||||||||  |||| ||| |||| | ||||||||| |||||  ||||    
T  16069529 cttttataccgccaaacttacaaaaataagtaacaagaattgttcaaacgaaacgacaatccctgtgtatatgatattttacttatcactttattacttg 16069628  T
Q  206 gtaaacgatttggtacacttgc 227  Q
    || ||| | |||||||||||||    
T  16069629 gttaac-aattggtacacttgc 16069649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 22623116 - 22622892
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttct-aac 99  Q
    ||||| || ||||||||||||   |||||||||||||| |||||||||| ||||||||||||| ||||||||| | |||||||| ||||| ||| | |||    
T  22623116 aggggatttgaagaatcctaacagctgcttacttttctgcaaccaaaac-aggtaaacttgctctgttgcaaatatataaaaatggcaagtctttttaac 22623018  T
Q  100 ccttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    | |||||||| ||| | ||||  | | |||| |||||||| |||||| ||||||||||| |||||||  |  ||||| ||||||||||| |||| |||||    
T  22623017 cgttaactttaataccatcaacttaataaaattaagtaacgcgaattttttggacgaaaggacaatcccttaggatatgatactctactaatcactttat 22622918  T
Q  200 atcttggtaaacgatttggtacacttg 226  Q
      |||||| ||||| ||||||||||||    
T  22622917 tacttggtcaacga-ttggtacacttg 22622892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 13345212 - 13345435
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| |||||| |||||||| | ||| ||||||||||  ||||||||| ||||||   |||||||||  ||| ||||||||| |||||  ||| |||||     
T  13345212 ggggattcgaaaaatcctaaccgctgtttacttttcttaaaccaaaac-aggtaac--tgctatgttttaaatagataaaaactgcaaatctt-taacct 13345307  T
Q  102 ttaact--tttat---atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatt 196  Q
    ||||||  |||||   |||||||||||   | ||||||||||| |||||||||||||| |||||||||||  |||||||| |||||||||||||||| ||    
T  13345308 ttaactcttttattttatcgtcaaact---ataaataagtaacgcgaattgtttggacaaaacgacaatccatgtggatatgatactctacttatcactt 13345404  T
Q  197 tatatcttggtaaacgatttggtacacttgc 227  Q
    |||  |||||||||| |||||||||||||||    
T  13345405 tattacttggtaaacaatttggtacacttgc 13345435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 727681 - 727495
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||||||| ||| | ||||||   ||||| |||||||||| ||||||| || |||||||||||||| |||||||||||||               
T  727681 aggggattcgaagaatcttaaccgctgctttactttctgcaaccaaaac-aggtaaattttctatgttgcaaacaaataaaaattgcaa----------- 727594  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    | || |||||||||||||||||| |||||||||||||||| |||||||| ||||||||    |||| |||||||| ||||||||||||||||| |||||    
T  727593 cctatcttttatatcgtcaaactaacaaaaataagtaacaagaattgttcggacgaaagagtaatccttgtggatgcgatactctacttatcactttat 727495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 16916819 - 16916995
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||||||||||  | |||||||||||||| ||||||||| |||||||| | ||| ||||||||| |||||||||||||||               
T  16916819 aggggattcgaagaatcctacccgctgcttacttttctgcaaccaaaaacaggtaaattcgctctgttgcaaagagataaaaattgcaa----------- 16916907  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
      ||||||||||| |||| ||| || |||||||||||||  |||||||| |||||||| |||||||  ||||||||||||||||||||||    
T  16916908 -ctaacttttataccgtc-aacctataaaaataagtaacgagaattgttcggacgaaaggacaatccctgtggatacgatactctactta 16916995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 3591654 - 3591752
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||  |||||||||||||| |||||||||||| |||||||||||||||||| |||||| |||||  |||| |||||||||| ||||||||||    
T  3591654 aaataagtaaggcgaattgtttggacaaaacgacaatctatgtggatacgatactctatttatcactttattacttgataaacgattttgtacacttgc 3591752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 59 - 217
Target Start/End: Original strand, 16787657 - 16787815
Alignment:
Q  59 ttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaa 158  Q
    ||||||||||||||||| |||||||||||||  ||  ||||||| |||| ||||||  |  |   | |||||||||||||| | |||||||||| | |||    
T  16787657 ttgctatgttgcaaacatataaaaattgcaaatctcttaaccctaaactcttatatattttattgttcaaaaataagtaacgcaaattgtttgggcaaaa 16787756  T
Q  159 cgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttg 217  Q
    ||||||||| |||| |||||||||||||||||||| |||||  |||| |||||||||||    
T  16787757 cgacaatctatgtgaatacgatactctacttatcactttattacttgataaacgatttg 16787815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 127 - 226
Target Start/End: Original strand, 15813523 - 15813623
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctac-ttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    ||||||||||||||||||||||||  | |||||||||||| |||||||||| ||||||||| |||||| ||||| | ||| |||||||||||||||||||    
T  15813523 aaaaataagtaacacgaattgtttcaaagaaacgacaatccttgtggatacaatactctactttatcactttattttttgataaacgatttggtacactt 15813622  T
Q  226 g 226  Q
    |    
T  15813623 g 15813623  T

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Target: chr1; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 23037885 - 23038110
Alignment:
Q  2 gggggttcgaagaatcct--aaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttct-aa 98  Q
    |||| |||||||||||||  || ||||| |||| ||||| ||||||||| || |||| |||||||||||||||||||| |||||||| ||   |||| ||    
T  23037885 ggggattcgaagaatcctctaaccactg-ttacatttctgcaaccaaaaacaagtaa-cttgctatgttgcaaacagaaaaaaattgtaat--ttctcaa 23037980  T
Q  99 cccttaact--tttat---atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatca 193  Q
    || ||| ||  |||||   ||| |||||||||   |||||||||||  || |||||| |||||||||||||||  |||||||||||||||| ||||||||    
T  23037981 ccattatctcttttattttatcatcaaactta---aaataagtaacgagagttgttttgacgaaacgacaatccatgtggatacgatactc-acttatca 23038076  T
Q  194 atttatatcttggtaaacgatttggtacacttgc 227  Q
     |||||  ||||||||||||||||||||||||||    
T  23038077 ctttattacttggtaaacgatttggtacacttgc 23038110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 33190892 - 33190681
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact--- 107  Q
    ||||||||||| | |||||||||||||| ||| |||| |||||||| |||||  ||||||||||| ||||||||| |||    ||||| ||||||||       
T  33190892 aagaatcctaaccgctgcttacttttctgcaatcaaa-ccaggtaa-cttgcactgttgcaaacaaataaaaattacaatc--tctaaaccttaactatt 33190797  T
Q  108 ----tttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatct 203  Q
        ||||||||||||| ||||   ||||||||||||||| |||||| || |||||||||||  |||||||||  ||||||||||||||| |||||  ||    
T  33190796 ttattttatatcgtcaa-ctta---aaataagtaacacgagttgtttagatgaaacgacaattgttgtggatattatactctacttatcattttattact 33190701  T
Q  204 tggtaaacgatttggtacac 223  Q
    || |||||||||||||||||    
T  33190700 tgataaacgatttggtacac 33190681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 17837615 - 17837517
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||| |||||||||| ||| ||| ||||||| ||||||||| |||||||||||||| | |||||  |||||||||| |||||||||||||||    
T  17837615 aaataagtaacgcgaattgtttagacaaaatgacaatccttgtggatatgatactctacttataactttattacttggtaaacaatttggtacacttgc 17837517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 26 - 181
Target Start/End: Complemental strand, 18830670 - 18830527
Alignment:
Q  26 tgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttatatcgtcaaactta 125  Q
    ||||||||||| | |||||||||| ||||||| || || ||||||||||||||| |||||||||           ||||||||||||| ||||||| |||    
T  18830670 tgcttacttttatgcaaccaaaac-aggtaaaatttctctgttgcaaacagatagaaattgcaa-----------cttaacttttataccgtcaaaatta 18830583  T
Q  126 caaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgata 181  Q
     |||||||||||| | ||||||||||||||||| |||||||  |||||||||||||    
T  18830582 aaaaaataagtaaaaagaattgtttggacgaaaggacaatccctgtggatacgata 18830527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 131 - 227
Target Start/End: Complemental strand, 21847729 - 21847634
Alignment:
Q  131 ataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||  |||||||||||||||||||||||||  ||||||||| ||||||||||||  | |||||  ||||||||||||||||||||||||||    
T  21847729 ataagtaacgtgaattgtttggacgaaacgacaatccatgtggatacaatactctactta-gactttattacttggtaaacgatttggtacacttgc 21847634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 24306307 - 24306404
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||| |||||| |||||  |||||| |||||  ||||||||||||||||||||||||| |||||  |||||||||||| |||||||||||||    
T  24306307 aaataagtaacgcgaattatttggttgaaacg-caatccctgtggatacgatactctacttatcactttattacttggtaaacgacttggtacacttgc 24306404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 14781739 - 14781915
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| |||||||||||||||   ||| | |||||||| ||||||||| |||||||| ||||| || |||||||| |||||||||||||               
T  14781739 aggggattcgaagaatcctaactgctgatcacttttctgcaaccaaaaacaggtaaatttgctctgatgcaaacatataaaaattgcaa----------- 14781827  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
    ||  |||||| | | |||||||||||||||||||||| |  ||||| || |||||||| ||||||  |||||||||||||||||||||||    
T  14781828 ct--acttttttcttgtcaaacttacaaaaataagtatctagaatttttcggacgaaaggacaattcttgtggatacgatactctactta 14781915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 56 - 227
Target Start/End: Original strand, 15813083 - 15813253
Alignment:
Q  56 aacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact-tttat---atcgtcaaacttacaaaaataagtaacacgaattgtttg 151  Q
    |||||||||||||| ||||| |||||||||||||  ||  ||||||||| || |||||   ||||||||| |    ||||||||||||  || |||||||    
T  15813083 aacttgctatgttggaaacatataaaaattgcaaacctcttaacccttatctctttattttatcgtcaaatt----aaaataagtaacgagagttgtttg 15813178  T
Q  152 gacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||| ||||| |||| |||||||||||||| || |||||||| |||||  | || |||||||||||||||||||||    
T  15813179 gacgcaacgaaaatccttgtggatacgatagtc-acttatcactttattacatgataaacgatttggtacacttgc 15813253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 23180010 - 23179839
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| |||||| |||||| | | |||||||||||||| |||||||||  ||||||| ||| ||| ||| |||||||||||||||||||               
T  23180010 aggggattcgaataatccttaccgctgcttacttttctccaaccaaaaa-aggtaaaattgttattttgtaaacagataaaaattgcaa----------- 23179923  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactcta 186  Q
    ||  ||||||||| |||||||||||||||||||| ||||  |||||||| |||||||| |||||||  |||||||| |||||||||    
T  23179922 ct--acttttataccgtcaaacttacaaaaataaataacgagaattgttcggacgaaaggacaatccctgtggatatgatactcta 23179839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 9787879 - 9787978
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||   || |||||| |||||||||||||| | | ||||||||||||||||||||||| |||||  |||| |||| ||||||||||||||||    
T  9787879 aaaataagtaattggagttgtttagacgaaacgacaatttatatggatacgatactctacttatcactttattacttgctaaatgatttggtacacttgc 9787978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 15 - 86
Target Start/End: Original strand, 18529079 - 18529149
Alignment:
Q  15 atcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattg 86  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||  |||||||||||    
T  18529079 atcctaaccactgcttacttttctacaaccaaaa-caggtaaacttgctctgttgcaaattgataaaaattg 18529149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 51473875 - 51473968
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtaca 222  Q
    ||||| ||||||| | |||||||||||| |||||||||||  | ||||||||||||||||||||||| |||||  |  ||||||||||||||||||    
T  51473875 aaaaacaagtaacgcaaattgtttggacaaaacgacaatccatatggatacgatactctacttatcactttattac--ggtaaacgatttggtaca 51473968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 25 - 107
Target Start/End: Original strand, 18100911 - 18100989
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact 107  Q
    |||||||||||||| |||||||||| | |||| |||||||||||||||||||||||||||||||  | |||||||||||||||    
T  18100911 ctgcttacttttctgcaaccaaaac-atgtaa-cttgctatgttgcaaacagataaaaattgca--atttctaacccttaact 18100989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 22664305 - 22664206
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||| ||| ||| |||||| ||||||| || ||||   ||||||| |||||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  22664305 aaaataagcaacgcgagttgtttagacgaaatgaaaatcccagtggataagatactctacttatcactttattacttggtaaacgatttggtacatttgc 22664206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 24281376 - 24281277
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||| | ||||||| |||  |||||| ||||  |||||||| |||| ||||||||||| |||||  ||||||||||||||||||||| ||||    
T  24281376 aaaataagtaacgcaaattgttcggaaaaaacgataatccatgtggatatgataatctacttatcactttattacttggtaaacgatttggtacatttgc 24281277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 26648971 - 26649068
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||| |||| ||| ||||||||||||||||| ||||  ||||||||| ||| || |||||||| |||||  |||||||||||||||| ||||||||    
T  26648971 aaaataaataacgcgagttgtttggacgaaacgataatccatgtggatacaatattc-acttatcattttattacttggtaaacgatttgatacacttg 26649068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 24054099 - 24054015
Alignment:
Q  106 cttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttat 191  Q
    |||||||| ||||||||||||| ||||||||||||  |||||||  ||||||| |||||||  |||||||| ||||||||||||||    
T  24054099 cttttataccgtcaaacttacataaataagtaacaaaaattgttgagacgaaaggacaatccctgtggata-gatactctacttat 24054015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 27117720 - 27117817
Alignment:
Q  130 aataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||| |  |||||||||  |||||||||||   |||| |||| ||||||||||||||| |||||  ||||||||||||||||||| ||||||    
T  27117720 aataagtaacgcagattgtttggttgaaacgacaattcatgtgaatacaatactctacttatcactttattacttggtaaacgatttggtaaacttgc 27117817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 222
Target Start/End: Complemental strand, 34481067 - 34480974
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtaca 222  Q
    |||||||||||||||||  |||||| |||| |||| || |||||||||  ||| ||||||||||| |||||  ||||||||||||||| |||||    
T  34481067 aaataagtaacacgaatgttttggatgaaatgacagtcattgtggatataatattctacttatcactttattacttggtaaacgattttgtaca 34480974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 26540959 - 26540896
Alignment:
Q  163 aatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||| ||||||||||||||||||||||| || |||||  ||||||||||||||||||||||||||    
T  26540959 aatccttgtggatacgatactctactta-cactttattacttggtaaacgatttggtacacttgc 26540896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 15807895 - 15807980
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||| ||| ||||||||||| | ||||||| |||||||||||||||| | ||| |||||||| ||||||||||| |||||||||||||    
T  15807895 ggggattcaaagaatcctaatcgctgcttatttttctacaaccaaaa-ctggt-aacttgctctgttgcaaacaaataaaaattgcaa 15807980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 21973107 - 21973164
Alignment:
Q  29 ttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgc 87  Q
    |||||||||| ||||||||| ||||||| |||| |||||||||||||||||||||||||    
T  21973107 ttacttttctgcaaccaaaaacaggtaa-cttgttatgttgcaaacagataaaaattgc 21973164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 32383008 - 32383097
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||| ||||||| ||||||||||||||||||||||||           ||||||||| |||||| |||||  |||||||||||||||||||||||||    
T  32383008 aaaaataggtaacacaaattgtttggacgaaacgacaatc-----------gatactctatttatcactttattacttggtaaacgatttggtacacttg 32383096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 24267783 - 24267880
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||||||  |||||| || |||||||| ||||||| | |||||| |||||| ||||||||| |||||  |||| |||| |||||| ||||||||    
T  24267783 aaataagtaacgtgaattgattagacgaaacaacaatctatatggatatgatactatacttatcattttattacttgataaatgatttgatacacttg 24267880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 12012803 - 12012899
Alignment:
Q  131 ataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||| ||||| |||| ||  ||||||||||   ||||||||| ||||||||||||||| ||||   |||| ||||||||||| |||||||||    
T  12012803 ataagtaacgcgaatagtttagataaaacgacaattcatgtggatacaatactctacttatcactttaatacttgataaacgatttgatacacttgc 12012899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 12012688 - 12012773
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||| ||||||||||||||| |  || |||||||| | |||||||||| |||||| || ||||||||||||||| |||||||||||||    
T  12012688 ggggattcgaagaatcctaatcgttgtttacttttgtgcaaccaaaac-aggtaa-ctcgctatgttgcaaacaaataaaaattgcaa 12012773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 147730 - 147632
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||||||| |||  ||||| ||||||| |||||||  |||| ||| ||||||| |||||||| |||||  ||||  |||||||||| ||||||||    
T  147730 aaaataagtaacgcgagctgtttagacgaaatgacaatccatgtgaatatgatactccacttatcactttattacttgtgaaacgatttgatacacttg 147632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 44795447 - 44795370
Alignment:
Q  148 tttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||||||||||||||  |||||||||||||||| |||||||  |||||  ||||||||| | || ||||||||||    
T  44795447 tttggacgaaacgacaatccatgtggatacgatactc-acttatctctttattacttggtaaatgcttcggtacacttg 44795370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 227
Target Start/End: Complemental strand, 16359970 - 16359871
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||| ||| || ||| ||| ||||| ||||||||| |   ||||||||| ||||| |||||| || |||||  |||||||||||||||||||||||||    
T  16359970 aaaaattagtgacgcgagttgattggatgaaacgacagtacatgtggatacaatactatactta-cattttattacttggtaaacgatttggtacacttg 16359872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 25403964 - 25404036
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaa 73  Q
    ||||||||  ||||||||||| | || |||||||||||  |||||||| |||||||| ||||| |||||||||    
T  25403964 agggggtttaaagaatcctaaccgctacttacttttctggaaccaaaaacaggtaaagttgctctgttgcaaa 25404036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32382882 - 32382968
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||| ||| |||||||||||   ||||| || ||||| |||||||||| ||||||  ||||| |||||||||||||||||||||||||    
T  32382882 aggggattcaaagaatcctaacggctgctaacatttctgcaaccaaaac-aggtaat-ttgctctgttgcaaacagataaaaattgcaa 32382968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 16360071 - 16360010
Alignment:
Q  26 tgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||| ||||||| |||||||||| |||||| |||||| ||||||||||| |||||||||||||    
T  16360071 tgctttcttttctgcaaccaaaac-aggtaa-cttgctttgttgcaaacaaataaaaattgcaa 16360010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 17121380 - 17121460
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||||||||||||| | |||||||||||||| |||||||||| ||   |||||||| | ||||||||| || |||| |||||    
T  17121380 ttcgaagaatcctaaccgctgcttacttttctgcaaccaaaacaag--taacttgctctattgcaaacaaatgaaaaatgcaa 17121460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 28008320 - 28008244
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||||||||| | |||||||||||||| |||||||||| ||   || ||||| | ||| |||||||||||||||||||    
T  28008320 aagaatcctaaccgctgcttacttttctgcaaccaaaacaag--taatttgctctattggaaacagataaaaattgcaa 28008244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 9787779 - 9787839
Alignment:
Q  28 cttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||||||||| ||||||||| ||||| | |||||| |||||||||||| | ||||||||||    
T  9787779 cttacttttctgcaaccaaaaacaggtca-cttgctctgttgcaaacagttcaaaattgcaa 9787839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 213
Target Start/End: Complemental strand, 24214643 - 24214558
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacga 213  Q
    ||||||||||||   | |||||| |||||||| ||||||  |||||||||  |||| ||||||||| |||||  ||||||||||||    
T  24214643 aaaataagtaacgtaagttgtttagacgaaacaacaatccatgtggatacagtactgtacttatcactttattacttggtaaacga 24214558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 51473803 - 51473836
Alignment:
Q  56 aacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||||| |||||||||||||||||||||||||||    
T  51473803 aacttgatatgttgcaaacagataaaaattgcaa 51473836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 22620362 - 22620290
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    |||||||||||||  ||||| ||| ||||||| ||||||   | |||||||||||||||| |||||| |||||    
T  22620362 aaaaataagtaacgtgaattatttagacgaaaagacaattcctatggatacgatactctagttatcactttat 22620290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 2e-69; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 14 - 227
Target Start/End: Original strand, 17743363 - 17743575
Alignment:
Q  14 aatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttata 113  Q
    |||||||| | | |||| ||||||||||||||||| ||||||||||||||  |||||||| |||||||||||||||  || |||||||||||||||||||    
T  17743363 aatcctaaccgcggcttccttttctacaaccaaaaacaggtaaacttgcttagttgcaaaaagataaaaattgcaactct-ctaacccttaacttttata 17743461  T
Q  114 tcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacga 213  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| |||||  ||||||||||||    
T  17743462 tcgttaaacttgcaaaaataagtaacacgaattgtttggacgaaacgataatccatgtggatacgatactctacttatcactttattacttggtaaacga 17743561  T
Q  214 tttggtacacttgc 227  Q
    ||||||||||||||    
T  17743562 tttggtacacttgc 17743575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 27908993 - 27909218
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||||||||||||||| | ||||||| |||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||   |||||||||    
T  27908993 ggggattcgaagaatcctaaccgctgcttaattttctgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaacg-ttctaaccc 27909090  T
Q  102 tt--aacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||  ||||||||||||||||||||||||||||||||||||  |||||||||||| ||||| | || |  ||||||||||||||||||||||||| |||||    
T  27909091 ttttaacttttatatcgtcaaacttacaaaaataagtaacgtgaattgtttggatgaaacaataacccatgtggatacgatactctacttatcactttat 27909190  T
Q  200 atcttggtaaacgatttggtacacttgc 227  Q
      ||||||||||||||||||||||||||    
T  27909191 tacttggtaaacgatttggtacacttgc 27909218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 28925747 - 28925522
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||||||||||| | |||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  28925747 aggggattcgaagaatcctaacctctgcttacttttctgcaaccaaaac-aggtaaacttgctatgttgcaaacaaataaaaattgcaagctttctaacc 28925649  T
Q  101 cttaa-cttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||| | ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||   |||||||| |  |||||||||||| |||||    
T  28925648 ctttatcttttatatcgtcaaacttacaaaaataaataacatgaattgtttggacgaaacgacaatccacgtggatacaacgctctacttatcactttat 28925549  T
Q  200 atcttggtaaacgatttggtacacttgc 227  Q
      |||||| |||||||| ||||||||||    
T  28925548 tacttggt-aacgatttagtacacttgc 28925522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 29719105 - 29719330
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| |||||||||||||||   |||||||||||||| ||||||||  |||||||||||||| ||||||| ||| |||||||||||||  || ||||||    
T  29719105 aggggattcgaagaatcctaactgctgcttacttttctgcaaccaaacacaggtaaacttgctctgttgcatacatataaaaattgcaactct-ctaacc 29719203  T
Q  101 cttaacttttat---atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaattt 197  Q
    ||||  ||||||   | |||||||||   ||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||    
T  29719204 cttatattttattataccgtcaaact---aaaaataagtaacgcgaattgtttgaacgaaacgacaatccttgtggatacgataatctacttatcacttt 29719300  T
Q  198 atatcttggtaaacgatttggtacacttgc 227  Q
    ||  ||||||||||||||||||||||||||    
T  29719301 attacttggtaaacgatttggtacacttgc 29719330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 8 - 227
Target Start/End: Complemental strand, 25196229 - 25196011
Alignment:
Q  8 tcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttct-aacccttaac 106  Q
    |||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||||||||||||| ||||||||| |||| ||| | |||| |||||    
T  25196229 tcgaagaatcctaaccactgcttacttttttgcaaccaaaac-aggtaaacttgctatgttgcaaacatataaaaatttcaagtctttttaaccattaac 25196131  T
Q  107 ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttgg 206  Q
    || |||||||||||  | | |||||||||||||  ||||||||||||||||| ||||| |  |||||||| |||||||||||||||| |||||  |||||    
T  25196130 ttatatatcgtcaacttaataaaaataagtaacgtgaattgtttggacgaaaggacaacccctgtggatatgatactctacttatcactttattacttgg 25196031  T
Q  207 taaacgatttggtacacttgc 227  Q
    ||||||| |||||||||||||    
T  25196030 taaacga-ttggtacacttgc 25196011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 25 - 225
Target Start/End: Original strand, 31804796 - 31804997
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttat---atcgtcaaa 121  Q
    |||||||||||||| ||||||||| |||||||| ||||| | ||||||||| |||||||||||||  || |||||||||| |||||||   ||||||||     
T  31804796 ctgcttacttttctgcaaccaaaaacaggtaaatttgctttattgcaaacaaataaaaattgcaactct-ctaacccttatcttttattatatcgtcaa- 31804893  T
Q  122 cttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtac 221  Q
    ||||||||||||||||||||  |||| |||||||||||| |||||| ||||||||| ||||||||||||||| |||||   ||||||||| |||||||||    
T  31804894 cttacaaaaataagtaacacagattggttggacgaaacggcaatctctgtggatacaatactctacttatcactttattatttggtaaacaatttggtac 31804993  T
Q  222 actt 225  Q
    ||||    
T  31804994 actt 31804997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 17349574 - 17349362
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| |||||||||| || | | |||||||||||| | ||||||||| || ||||||||||| |||||||||||||||||||||||||         ||    
T  17349574 aggggattcgaagaattctgaccgctgcttacttttttgcaaccaaaaacaagtaaacttgctctgttgcaaacagataaaaattgcaa---------cc 17349484  T
Q  101 cttaacttttat---atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaattt 197  Q
    |||| |||||||   |||||||| ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| || |||    
T  17349483 cttatcttttattatatcgtcaa-cttacaaaa-taagtaacgcgaaatgtttggacgaaacgacaatctttgtggatacgatactctactta-cacttt 17349387  T
Q  198 atatcttggtaaacgatttggtaca 222  Q
    ||  ||||||||||||||| |||||    
T  17349386 attacttggtaaacgatttagtaca 17349362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 15339464 - 15339238
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| || ||||||||||||   |||||||||||||| |||| |||| ||| |||||||||| ||||||||||| |||||||||||||  || ||||||    
T  15339464 aggggatttgaagaatcctaactgctgcttacttttctgcaacaaaaaacagataaacttgctctgttgcaaacaaataaaaattgcaactct-ctaacc 15339366  T
Q  101 cttaacttttat---atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaattt 197  Q
    |||| |||||||   ||| | || ||||||||  |||||||| | ||||||||||||||||||||||||  |||||||| |||||||||||| ||| |||    
T  15339365 cttatcttttattatatccttaa-cttacaaag-taagtaacgctaattgtttggacgaaacgacaatccatgtggatatgatactctacttttcacttt 15339268  T
Q  198 atatcttggtaaacgatttggtacacttgc 227  Q
    ||  ||||||||| ||||||||||||||||    
T  15339267 attacttggtaaatgatttggtacacttgc 15339238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 2 - 226
Target Start/End: Complemental strand, 30411892 - 30411679
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| |||||| |||||||| | |||||||||||||| ||||||||| || ||||||||||| |||||||||||||||||||||||||           |    
T  30411892 ggggattcgaaaaatcctaaccgctgcttacttttctgcaaccaaaaacatgtaaacttgctctgttgcaaacagataaaaattgcaa-----------c 30411804  T
Q  102 ttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatat 201  Q
     || ||||||||  |||||| ||||||||||||||||| | ||||||| |||||||| |||||||  ||| ||||||||||||||||||||| |||||      
T  30411803 ctatcttttatactgtcaaaattacaaaaataagtaacgcaaattgttgggacgaaatgacaatccctgttgatacgatactctacttatcactttatta 30411704  T
Q  202 cttggtaaacgatttggtacacttg 226  Q
    | ||||||| ||||| |||||||||    
T  30411703 catggtaaaagatttcgtacacttg 30411679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 40 - 227
Target Start/End: Original strand, 17635687 - 17635874
Alignment:
Q  40 caaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccctt--aacttttatatcgtcaaacttacaaaaataagta 137  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||   |||||||||||  | |||||| |||||||| ||||||||||||||||    
T  17635687 caaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaacctttctaacccttttatcttttacatcgtcaa-cttacaaaaataagta 17635784  T
Q  138 acacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||  || || ||| |||||||||||||||| |||||||| ||| |||||||| ||  |||||  |||||||||||||||| |||| ||||    
T  17635785 acgtgagtttttttgacgaaacgacaatctctgtggatatgattctctacttttctctttattacttggtaaacgatttgctacatttgc 17635874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 29143175 - 29142996
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||||||| ||| | ||| ||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||               
T  29143175 aggggattcgaagaatcttaaccgctgtttacttttctacaaccaaaat-aggtaaacttgctctgttgcaaacagataaaaattgcaa----------- 29143088  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatc 192  Q
    || |||||||||| ||||||||||||||||||||||||| ||||||||| | |||||  |||||||  |||||||||| |||||||||||||    
T  29143087 ctaaacttttataccgtcaaacttacaaaaataagtaacgcgaattgttcgaacgaacggacaatccatgtggatacggtactctacttatc 29142996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 11 - 225
Target Start/End: Complemental strand, 32085678 - 32085465
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact--- 107  Q
    |||| |||||| | |||||||||||||| |||||||| |||||||| |||||| |||||||||||||||||||||||||    |||||| |||||||       
T  32085678 aagagtcctaaccgctgcttacttttctgcaaccaaa-ccaggtaa-cttgctctgttgcaaacagataaaaattgcaatc--tctaactcttaactctt 32085583  T
Q  108 ----tttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatct 203  Q
        ||||||||||||| ||||   |||||||||||||||  ||||| |||||||||||||||  |||||||| |||||||||||||||| |||||  ||    
T  32085582 ttattttatatcgtcaa-ctta---aaataagtaacacgagctgtttagacgaaacgacaatccatgtggatatgatactctacttatcactttattact 32085487  T
Q  204 tggtaaacgatttggtacactt 225  Q
    |||||||| |||||||||||||    
T  32085486 tggtaaacaatttggtacactt 32085465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 7 - 227
Target Start/End: Original strand, 17675508 - 17675729
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc--tta 104  Q
    |||||| ||| |||| | ||| ||| |||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||   |||||||||  |||    
T  17675508 ttcgaaaaattctaaccgctgtttatttttctgcaaccaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaacctttctaaccctttta 17675606  T
Q  105 acttttatatcgtcaaacttacaaaaataagtaacacga-attgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatct 203  Q
     |||||| |||||| ||||||||||||||||||||  ||  || ||| |||||||||||||||| ||| |||| ||| |||||||| ||  |||||  ||    
T  17675607 tcttttacatcgtc-aacttacaaaaataagtaacgtgagttttttttgacgaaacgacaatctctgttgatatgattctctacttttctctttattact 17675705  T
Q  204 tggtaaacgatttggtacacttgc 227  Q
    |||||||||||||| |||| ||||    
T  17675706 tggtaaacgatttgctacatttgc 17675729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 127 - 225
Target Start/End: Original strand, 45621880 - 45621978
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||| |||||  ||||||||||||||| ||||||||    
T  45621880 aaaaataagtaacacgaattgtttggacgaaacgacaatccttgtagatacgatactctacttctcactttattacttggtaaacgattttgtacactt 45621978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 26603234 - 26603449
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||||||||||||||| | |||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||  || |||| |      
T  26603234 ggggattcgaagaatcctaaccgctgcttacttttctacaaccaaaaacaggtaaac-tgctctgttgcaaacagataaaaattgca--acatctatctt 26603330  T
Q  102 ttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatat 201  Q
    |||    | ||| ||||||||   ||||||||||||||   ||||||||| |||||| |||||||  | |  |||||||||||||||||||| ||| |      
T  26603331 tta----tcataccgtcaaac---caaaaataagtaacgtcaattgtttgcacgaaaagacaatccatataaatacgatactctacttatcactttttta 26603423  T
Q  202 cttggtaaacgatttggtacacttgc 227  Q
    |||| ||||| |||||||||||||||    
T  26603424 cttgataaacaatttggtacacttgc 26603449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 20174635 - 20174732
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    ||||||||||||| |||||||||||||||||||||||||  |||||| | |||||||||||||||| |||||  ||||||||||||||||||||||||    
T  20174635 aaaataagtaacatgaattgtttggacgaaacgacaatccatgtggaaatgatactctacttatcactttattacttggtaaacgatttggtacactt 20174732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 24090812 - 24090997
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||| ||||||| |||||||||||||||| |||||||||| ||||||| | ||  | ||||||| | |||||||||||||               
T  24090812 aggggattcgaagcatcctaaccactgcttacttttctgcaaccaaaac-aggtaaattcgcagttttgcaaaaatataaaaattgcaa----------- 24090899  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||| | ||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||  ||||||||||||| |||| |||||| |||||    
T  24090900 cttca-ttttataccgtcaaacttacaaaaataagtaacaagaattgtttggacgaaaggacaatccatgtggatacgatattctatttatcactttat 24090997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 25618780 - 25618557
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| |||||||||| | || | |||||||||||||| |||||||||| |||||||||| || |||||||||||||||||||||||||  || |||||      
T  25618780 ggggattcgaagaattcgaaccgctgcttacttttctgcaaccaaaac-aggtaaactttctctgttgcaaacagataaaaattgcaaatct-ctaactt 25618683  T
Q  102 ttaactttt-----atatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatt 196  Q
    || ||| ||     |||||||||| ||   |||||||||| || |||||||||| |||||||||||||||  |||||||| |||||||||||||||| ||    
T  25618682 ttcactcttttattatatcgtcaa-ct---aaaaataagttacgcgaattgtttagacgaaacgacaatccatgtggatatgatactctacttatcactt 25618587  T
Q  197 tatatcttggtaaacgatttggtacacttgc 227  Q
    |||  |||||| ||||||||| ||| |||||    
T  25618586 tattacttggt-aacgatttgatacgcttgc 25618557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 25920479 - 25920303
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||| ||||||| ||| ||||||| |||||||| ||||||||| |||||||| | ||| |||||||||||||||||||||||||               
T  25920479 aggggattcaaagaatcataatcactgctcacttttctgcaaccaaaaacaggtaaaatcgctctgttgcaaacagataaaaattgcaa----------- 25920391  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
      |||||||||||  ||| ||||||||||||||||||||  |||||||| |||||||| |||||||  ||||||||||||||||||||||    
T  25920390 -ctaacttttataatgtc-aacttacaaaaataagtaacgagaattgttcggacgaaaggacaatccatgtggatacgatactctactta 25920303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 11382626 - 11382851
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||||||||||||||| |||  | || ||||||||||||||| |||| || |||| |||||| |||||||||||||||||| ||||||  || |||||     
T  11382626 agggggttcgaagaatcataacaattgtttacttttctacaacaaaaaacaagtaa-cttgctctgttgcaaacagataaaatttgcaaatct-ctaact 11382723  T
Q  101 cttaact--tttat---atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaat 195  Q
     ||||||  |||||   |||||||||||   ||||||||||||| |||||| |||||| ||||  |||||   |||||||| |||||||||||||||| |    
T  11382724 tttaactcttttatcttatcgtcaaact---aaaaataagtaacgcgaattatttggatgaaaatacaattcatgtggatatgatactctacttatcact 11382820  T
Q  196 tta-tatcttggtaaacgatttggtacacttg 226  Q
    ||| |||| |||||||||||||| ||||||||    
T  11382821 ttattatc-tggtaaacgatttgatacacttg 11382851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 11 - 222
Target Start/End: Original strand, 25885345 - 25885553
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact--- 107  Q
    |||| |||||| ||||||||||||||||||||||||  |||||||| ||| || | || | ||||||||||||||| || |  ||||||||||||||       
T  25885345 aagagtcctaaccactgcttacttttctacaaccaa--ccaggtaacctt-ctctattccgaacagataaaaattgaaata--tctaacccttaactctt 25885439  T
Q  108 ----tttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatct 203  Q
        |||||||||||  | |    |||||||||||||| |||||||||||||||||||||||  |||||||||||||||| | |||||| | ||||  ||    
T  25885440 ttattttatatcgtcggaat----aaaataagtaacacaaattgtttggacgaaacgacaattcttgtggatacgatactattcttatc-acttattact 25885534  T
Q  204 tggtaaacgatttggtaca 222  Q
    | |||||||||||||||||    
T  25885535 ttgtaaacgatttggtaca 25885553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 12953293 - 12953393
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||||||||| |||||||||| |||||||||||||||  |||||| || ||||||||||||| | |||||  |||| |||| |||||||||||||||    
T  12953293 aaaaataagtaacgcgaattgttttgacgaaacgacaatccatgtggacacaatactctacttattactttattacttgataaatgatttggtacacttg 12953392  T
Q  227 c 227  Q
    |    
T  12953393 c 12953393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 125 - 199
Target Start/End: Complemental strand, 25535376 - 25535302
Alignment:
Q  125 acaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    |||||||||||||||| |||||||| |||||||| |||||||  ||||||||||||||||||||||||| |||||    
T  25535376 acaaaaataagtaacaagaattgttcggacgaaaggacaatccctgtggatacgatactctacttatcactttat 25535302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 25888224 - 25888319
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||| |||||||||||    |||||||||||  ||||||||||||||| ||||||||| |||||  |||||||||| |||||||||||||||    
T  25888224 aaaataagtaacgcgaattgtttg----aaacgacaatccatgtggatacgatactgtacttatcactttattacttggtaaacaatttggtacacttgc 25888319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 226
Target Start/End: Complemental strand, 13776536 - 13776340
Alignment:
Q  29 ttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact-tttat---atcgtcaaactt 124  Q
    ||||||||||  ||| |||| ||||||| ||| || |||||||||||||||||||||||||  ||  ||||||||| || |||||   |||||||| |||    
T  13776536 ttacttttctggaacaaaaaacaggtaatcttactctgttgcaaacagataaaaattgcaaatctcttaacccttatctctttattttatcgtcaa-ctt 13776438  T
Q  125 acaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacact 224  Q
    |   |||||||||||  |  |||||||||||||| |||||||| |||||||||||||||| |||||||| |||||   ||  ||||||||||| ||||||    
T  13776437 a---aaataagtaacgtgggttgtttggacgaaatgacaatctatgtggatacgatactc-acttatcactttattatttaataaacgatttgctacact 13776342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 2 - 199
Target Start/End: Complemental strand, 25530660 - 25530475
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||||||||||||||| | ||||||||| || | |||||||||| ||||||| | ||| ||||||||||||||||||||||||  ||||           
T  25530660 ggggattcgaagaatcctaaccgctgcttactattttgcaaccaaaac-aggtaaattcgctctgttgcaaacagataaaaattgca--actt------- 25530571  T
Q  102 ttaacttttatatcgtc-aaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
       ||||||||| | || ||||| ||||||||||||||   ||||| |  |||||||| |||||||  ||||||||||||||||||||||||| |||||    
T  25530570 ---acttttataccatcaaaactcacaaaaataagtaatgagaattttacggacgaaaggacaatccctgtggatacgatactctacttatcactttat 25530475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 45553228 - 45553130
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||| |||||||||||| |||||| |||||||||||  |||  |||||||| | ||||||||| |||||  |||| |||||||||||||||||||||    
T  45553228 aaataattaacacgaattgcttggacaaaacgacaatccctgtaaatacgatattttacttatcactttattacttgataaacgatttggtacacttgc 45553130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 19200135 - 19200233
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||   || ||||||||| |||||||||||| ||||||||||||||||| ||||||||  ||||   |||||||| ||||||||||||||||    
T  19200135 aaaataagtaatgtgagttgtttggatgaaacgacaatccttgtggatacgatactc-acttatcacattattatttggtaaaagatttggtacacttgc 19200233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 8503071 - 8503169
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||| |||||| | ||||||||||  |||| |||||||  |||||||| ||| ||||||||||||  ||||  ||||||||||||||||||||||||||    
T  8503071 aaattagtaacgcaaattgtttggttgaaatgacaatccatgtggatatgatcctctacttatcacgttattacttggtaaacgatttggtacacttgc 8503169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 25887786 - 25887864
Alignment:
Q  10 gaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||||||| ||| | ||| |||||||||| |||||||||  |||||| |||||| |||||||||||||||||||||||||    
T  25887786 gaagaatcataatcgctggttacttttctgcaaccaaaaataggtaa-cttgctctgttgcaaacagataaaaattgcaa 25887864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 27418465 - 27418394
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    |||||||||||||||||||||||||  |||| || ||||  |||||||| |||||||||||||||| |||||    
T  27418465 aaaataagtaacacgaattgtttggttgaaatgataatccatgtggatatgatactctacttatcactttat 27418394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 8447079 - 8447148
Alignment:
Q  157 aacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||  ||||||||||||| ||||||||| | |||||  ||||||||||||||||||||||||||    
T  8447079 aacgacaatccatgtggatacgataatctacttat-actttattacttggtaaacgatttggtacacttgc 8447148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 17197976 - 17197906
Alignment:
Q  120 aacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
    |||||||||||||||| |||  |||||||| |||||||| ||||||||  |||||||| ||||||||||||    
T  17197976 aacttacaaaaataagaaacgagaattgttcggacgaaaggacaatctccgtggatacaatactctactta 17197906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 23011764 - 23011861
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||| |||| | |||||||| ||| ||||||||||| |||||||||| ||| |||||||| || |||||  |||||||||  |||||||||||||||    
T  23011764 aaataaataacgcaaattgtttagacaaaacgacaatccttgtggatacaataatctactta-cactttattacttggtaaaaaatttggtacacttgc 23011861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 26667425 - 26667355
Alignment:
Q  120 aacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
    ||||||||||||||||||||  |||||||| | |||||| || ||||  ||||||||||||||||||||||    
T  26667425 aacttacaaaaataagtaacgagaattgttcgtacgaaaggaaaatccctgtggatacgatactctactta 26667355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 12953225 - 12953290
Alignment:
Q  9 cgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaac 74  Q
    ||||||||| ||| |  ||||||||||||| ||||||||| || ||||||||||||||||||||||    
T  12953225 cgaagaatcgtaatcgttgcttacttttctgcaaccaaaaacatgtaaacttgctatgttgcaaac 12953290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 9774334 - 9774394
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctac 187  Q
    ||||||||||||| | ||||| |||||| |||||||||||  |||||||||||||||||||    
T  9774334 aaaaataagtaacgcaaattggttggacaaaacgacaatccatgtggatacgatactctac 9774394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 21078641 - 21078685
Alignment:
Q  143 aattgtttggacgaaacgacaatctttgtggatacgatactctac 187  Q
    |||||||||||||||||||||||| |||||||| |||||||||||    
T  21078641 aattgtttggacgaaacgacaatccttgtggatgcgatactctac 21078685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 23933420 - 23933505
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||| ||| ||||||||||| | |||||||||||| |  ||||||| ||| |||| |||||| |||||||||||||||||||||||||    
T  23933420 ggggattcaaagaatcctaaccgctgcttacttttgtgaaaccaaa-ccaagtaa-cttgctctgttgcaaacagataaaaattgcaa 23933505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 45553352 - 45553268
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||| ||| ||||||||||| | ||||| || || || |||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  45553352 ggggattcaaagaatcctaaccgctgctaacgtt-ctgcaaccaaaac-aggtaa-cttgctatgttgcaaacagataaaaattgcaa 45553268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 28770444 - 28770538
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacac 223  Q
    ||||||||| |  |||||||||||| |||| |||| |   | ||||||||||||||||||||||| |||||   |||||||| ||||||||||||    
T  28770444 aaataagtagcgtgaattgtttggatgaaaagacattacctatggatacgatactctacttatcactttattatttggtaaaggatttggtacac 28770538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 229
Target Start/End: Original strand, 32440024 - 32440097
Alignment:
Q  155 gaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgcat 229  Q
    ||||||| |||| | |||||||||||||| || ||| || ||||| ||||||||||| |||||||||||||||||    
T  32440024 gaaacgataatcctcgtggatacgatactttattta-cactttatttcttggtaaacaatttggtacacttgcat 32440097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 128 - 189
Target Start/End: Original strand, 28606178 - 28606239
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactt 189  Q
    |||||||||||| | |  ||||| ||||||||||||||| | ||||||||||||||||||||    
T  28606178 aaaataagtaacgccagctgtttagacgaaacgacaatcctagtggatacgatactctactt 28606239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 12557736 - 12557807
Alignment:
Q  155 gaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||| ||||| |||||||| ||||| |||||||| || |||||  ||||||||| ||||||||||||||||    
T  12557736 gaaacggcaatccttgtggattcgatattctactta-cactttattacttggtaaaagatttggtacacttgc 12557807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 17198082 - 17197994
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||| ||||||||||| ||| | |||||||||||||| |||||||||  |||| || | ||| || ||||||| ||||||| ||||||    
T  17198082 aggggattcgaagaatcttaaccgctgcttacttttctgcaaccaaaaataggtgaattcgctctgctgcaaactgataaaagttgcaa 17197994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 26667520 - 26667452
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttg 69  Q
    ||||| ||||||||||||||| | ||| |||||||||| ||||| ||| |||||||| | |||||||||    
T  26667520 aggggattcgaagaatcctaaccgctgtttacttttctgcaaccgaaaacaggtaaaatcgctatgttg 26667452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 85
Target Start/End: Original strand, 45621806 - 45621838
Alignment:
Q  53 gtaaacttgctatgttgcaaacagataaaaatt 85  Q
    |||||||||||||||||||||||||||||||||    
T  45621806 gtaaacttgctatgttgcaaacagataaaaatt 45621838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 17890137 - 17890076
Alignment:
Q  26 tgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||||| ||||| |||||||||| |||||| |||||| ||||||||||| |||||||||||||    
T  17890137 tgcttacatttctgcaaccaaaac-aggtaa-cttgctctgttgcaaacatataaaaattgcaa 17890076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 25535486 - 25535400
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||| |||||||||||| || | |||||||||||| | ||||||||| |||||||| |  |  ||||||||| |||||||||||||||    
T  25535486 ggggattcgaagaatcccaaccgctgcttacttttttgcaaccaaaa-caggtaaattcacgctgttgcaaatagataaaaattgcaa 25535400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 5777314 - 5777277
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatc 166  Q
    |||||||||||  |||||||||||||||||||||||||    
T  5777314 aaataagtaacgtgaattgtttggacgaaacgacaatc 5777277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 1e-64; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 17438304 - 17438527
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||||||||||| |  ||||||||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||||||||  |||||| |    
T  17438304 aggggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaac-aggtaaaattgctctgttgcaaacagataaaaattgcaagctttctaaac 17438402  T
Q  101 cttaactt-ttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||| | || |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||  |||||||| |||||||||||||||| |||||    
T  17438403 ctttatttattatatcgtcaaacttacaaaaataagtaacgtgaattgtttggacgaaacgacaatccatgtggatatgatactctacttatcattttat 17438502  T
Q  200 atcttggtaaacgatttggtacactt 225  Q
    | |||||| |||||||||||||||||    
T  17438503 aacttggt-aacgatttggtacactt 17438527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 21302144 - 21301918
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||||||||||||||| | ||| ||| |||||| ||| |||||  ||||||||||||| ||||||||||||||||||||| ||| ||| |||||||    
T  21302144 ggggattcgaagaatcctaaccgctgtttatttttctgcaatcaaaaaaaggtaaacttgctctgttgcaaacagataaaaattccaacact-ctaaccc 21302046  T
Q  102 ttaacttttat---atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaattta 198  Q
     || |||||||   ||||||||  ||||||||||||||||| |||||||||||||||||| |||||||  ||||||||||||||||||||||||| ||||    
T  21302045 atatcttttattatatcgtcaat-ttacaaaaataagtaactcgaattgtttggacgaaatgacaatccatgtggatacgatactctacttatcacttta 21301947  T
Q  199 tatcttggtaaacgatttggtacacttgc 227  Q
    |  ||||||||||||||||||||||||||    
T  21301946 ttacttggtaaacgatttggtacacttgc 21301918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 7 - 228
Target Start/End: Complemental strand, 19908527 - 19908306
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac 106  Q
    |||||||||||||||   |||||||||||||| |||||||||  ||||||||||||| ||||||||| | ||||||||| |||  ||| |||||||||||    
T  19908527 ttcgaagaatcctaactgctgcttacttttctgcaaccaaaaataggtaaacttgctttgttgcaaaaaaataaaaattccaat-cttttaacccttaac 19908429  T
Q  107 ttttatatcgtcaaacttacaaaaa-taagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttg 205  Q
    ||||||||||||||||| | ||||| || || ||  ||||||||||||||||||||| | | |||||||||||||||| ||||||||| |||||   |||    
T  19908428 ttttatatcgtcaaactgaaaaaaaataggttacgtgaattgtttggacgaaacgacgacccttgtggatacgatactatacttatcattttattatttg 19908329  T
Q  206 gtaaacgatttggtacacttgca 228  Q
    |||||||||||||||||||||||    
T  19908328 gtaaacgatttggtacacttgca 19908306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 7 - 215
Target Start/End: Complemental strand, 932962 - 932754
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccctt-aa 105  Q
    |||||||||| |||| | |||||||||||||| |||||||||| || |||||||||| ||||||||||| |||||||||| ||| ||| ||| |||| ||    
T  932962 ttcgaagaatactaaccgctgcttacttttctgcaaccaaaacaag-taaacttgctctgttgcaaacaaataaaaattgtaagtcttttaaacctttaa 932864  T
Q  106 cttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttg 205  Q
    |||||||| ||||||||||| ||||||||||||   ||||| ||||||||||| |||||||| |||||||||||||||||| ||||||||||||  |||     
T  932863 cttttataacgtcaaacttataaaaataagtaatgtgaattttttggacgaaaggacaatctctgtggatacgatactctatttatcaatttattactta 932764  T
Q  206 gtaaacgatt 215  Q
    ||||||||||    
T  932763 gtaaacgatt 932754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 12411372 - 12411151
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaa-cc 100  Q
    |||| ||||||||||||||| |    |||||| |||| ||||||||  |||||||||||| | |||||||||||  |||||||||||| | |||||| ||    
T  12411372 ggggattcgaagaatcctaaccgtcacttactgttctgcaaccaaa--caggtaaacttgttgtgttgcaaaca--taaaaattgcaa-atttctaaacc 12411278  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttata 200  Q
    ||||||||||||||| ||||||||| |||||||||||||   ||||||||| |||||||||||||| ||||||||||||||||||||| |||| |||||     
T  12411277 cttaacttttatatcatcaaacttagaaaaataagtaacctaaattgtttgtacgaaacgacaatccttgtggatacgatactctactaatcactttatt 12411178  T
Q  201 tcttggtaaacgatttggtacacttgc 227  Q
     ||||||||  ||||||||||||||||    
T  12411177 acttggtaagtgatttggtacacttgc 12411151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 4650451 - 4650232
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagac-ttctaac 99  Q
    ||||| ||||||||||||||| |  ||||||||||||| |||||||||| |||||||||||||  ||||||||||||||||||||||||| | || ||||    
T  4650451 aggggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaac-aggtaaacttgctccgttgcaaacagataaaaattgcaagtctttttaac 4650353  T
Q  100 ccttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||||||||||| ||||||| |||||     |||||||||| |||||||||||| ||||| |||||||  ||||||||||||||| |||| |||| |||||    
T  4650352 ccttaacttttgtatcgtc-aactt-----aataagtaacgcgaattgtttgggcgaaaggacaatccctgtggatacgatactttactcatcactttat 4650259  T
Q  200 atcttggtaaacgatttggtacacttgc 227  Q
      ||||||||| || |||||||||||||    
T  4650258 tacttggtaaatga-ttggtacacttgc 4650232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 2 - 226
Target Start/End: Original strand, 2167492 - 2167714
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||||||||||||||| |||| |||||||||| ||||||||||| |||||| |||| |||||||||||||||||||||||||||  || ||||||     
T  2167492 ggggattcgaagaatcctaaccacttcttacttttccacaaccaaaac-aggtaa-cttggtatgttgcaaacagataaaaattgcaaatct-ctaacca 2167588  T
Q  102 ttaact--tttat---atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatt 196  Q
    || |||  |||||   || ||||||||   ||||||||||||   |||||||||||||||||||||| | | ||||||||||||||||||||||||| ||    
T  2167589 tttactcttttattttatagtcaaact---aaaaataagtaatgtgaattgtttggacgaaacgacattttatgtggatacgatactctacttatcactt 2167685  T
Q  197 tatatcttggtaaacgatttggtacacttg 226  Q
    |||  |||||| ||||||||||||||||||    
T  2167686 tattacttggt-aacgatttggtacacttg 2167714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 17 - 223
Target Start/End: Complemental strand, 20429920 - 20429714
Alignment:
Q  17 cctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccctta-actt---ttat 112  Q
    ||||| ||||| |||||||||| |||||||||  || |||||||||| ||||||||||| ||||||||||||| ||||||||||||||  |||   ||||    
T  20429920 cctaaccactgattacttttctgcaaccaaaat-agataaacttgctctgttgcaaacatataaaaattgcaa-acttctaacccttactcttttattat 20429823  T
Q  113 atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacg 212  Q
    ||||||||||||  ||||||||||||| |||||||| |||| |||| ||||||| || | ||||||||||||||||||||| |||||  ||||||||||     
T  20429822 atcgtcaaactt--aaaaataagtaacgcgaattgtgtggatgaaatgacaatccttatagatacgatactctacttatcattttattacttggtaaaca 20429725  T
Q  213 atttggtacac 223  Q
    |||| ||||||    
T  20429724 atttagtacac 20429714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 4 - 193
Target Start/End: Original strand, 19925498 - 19925688
Alignment:
Q  4 gggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagact--tctaaccc 101  Q
    ||||| |||||||||||| | |||||||||||||| ||| | ||| |||||||||||||| ||||||||||| |||||| ||||||| ||  | ||||||    
T  19925498 gggttagaagaatcctaaccgctgcttacttttctgcaaaccaaaacaggtaaacttgctctgttgcaaacatataaaa-ttgcaagtctcttttaaccc 19925596  T
Q  102 ttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatca 193  Q
    |||| ||||||||||| ||  | | ||||||||||||| |||||| ||||||||||| |||||||  ||||||||||||||||||| |||||    
T  19925597 ttaaattttatatcgttaacttaataaaaataagtaacgcgaattatttggacgaaaagacaatccatgtggatacgatactctacatatca 19925688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 2 - 226
Target Start/End: Original strand, 16245604 - 16245827
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| |||| ||||| |||| | |||||||||||||| ||||||||| ||||||| |||||| ||||||||| |||||||||||||||  || |||||||    
T  16245604 ggggattcggagaattctaaccgctgcttacttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaatagataaaaattgcaaatct-ctaaccc 16245701  T
Q  102 ttaact--tttat---atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatt 196  Q
    ||||||  |||||   || ||||||||    ||||||||||||  ||||||||||||||||| || ||||  |||||||| |||||||||||||||| ||    
T  16245702 ttaactcttttattttattgtcaaact----aaaataagtaacgagaattgtttggacgaaatgataatccatgtggatatgatactctacttatcactt 16245797  T
Q  197 tatatcttggtaaacgatttggtacacttg 226  Q
    |||  |||||||||||| ||||||||||||    
T  16245798 tattacttggtaaacgagttggtacacttg 16245827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 8770233 - 8770020
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| |||||||||||||||   |||||||||||||| |||||||||| ||||||||||||| ||||||||||| |||||||||||||               
T  8770233 aggggattcgaagaatcctaactgctgcttacttttctgcaaccaaaac-aggtaaacttgctctgttgcaaacatataaaaattgcaa----------- 8770146  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttata 200  Q
    | |||||||||||  ||||||||||||||| ||||||||| ||||||||  ||| ||| |||||||  |||||||| |||||| ||||||||| |||||     
T  8770145 cctaacttttatactgtcaaacttacaaaactaagtaacaagaattgttcagacaaaaggacaatccatgtggatatgatactttacttatcactttatt 8770046  T
Q  201 tcttggtaaacgatttggtacacttgc 227  Q
     |||||| ||||| |||||||||||||    
T  8770045 acttggttaacga-ttggtacacttgc 8770020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 29 - 227
Target Start/End: Original strand, 3116321 - 3116517
Alignment:
Q  29 ttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact-tttat---atcgtcaaactt 124  Q
    |||||||||| ||||||||||||||||  |||||| |||||||||||||||||||||||||  ||  ||||||||| || |||||   |||||||| |||    
T  3116321 ttacttttctgcaaccaaaaccaggtat-cttgctctgttgcaaacagataaaaattgcaaatctcttaacccttatctctttattttatcgtcaa-ctt 3116418  T
Q  125 acaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacact 224  Q
    |   |||||||||||  |||||||||||||||||||||||||  ||||||||| |||||| |||||||| |||||  |||||||||| ||||||||||||    
T  3116419 a---aaataagtaacgtgaattgtttggacgaaacgacaatccctgtggatactatactc-acttatcactttattacttggtaaacaatttggtacact 3116514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 12754796 - 12754977
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||||||||||| | |||||||||||||| |||||||||||||||||||| ||| ||||||||||| |||||||||| ||               
T  12754796 aggggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaccaggtaaactagctctgttgcaaacaaataaaaattgaaa----------- 12754884  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatca 193  Q
    |||||||||||||  |||||| ||||||||||||||||   ||||||||   |||||| ||||||| ||||||||||||||||||| ||||||    
T  12754885 cttaacttttatactgtcaaagttacaaaaataagtaaagagaattgttcatacgaaaggacaatcattgtggatacgatactctaattatca 12754977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 21325439 - 21325340
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||  |||||||||| |||||||||||||||    
T  21325439 aaaataagtaacacaaattgtttggacgaaacgacaatttttgtggatacgatactatacttatcagtttattacttggtaaacaatttggtacacttgc 21325340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 22349532 - 22349410
Alignment:
Q  103 taacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatc 202  Q
    |||||||||||  ||||| |||||||||||||||||   |||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||       
T  22349532 taacttttatactgtcaa-cttacaaaaataagtaatgtgaattgtttggacgaaacgacaatttatgtggatacgatactctacttatcactttattat 22349434  T
Q  203 ttggtaaacgatttggtacacttg 226  Q
    ||||||||||||||||||||||||    
T  22349433 ttggtaaacgatttggtacacttg 22349410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 14 - 230
Target Start/End: Original strand, 21303241 - 21303456
Alignment:
Q  14 aatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact------ 107  Q
    |||||||| | |||||||||||||| |||||||||| ||   |||||||| |||||||||||||||||||||||||    |||||||||| |||          
T  21303241 aatcctaaccgctgcttacttttctgcaaccaaaacaagt--aacttgctctgttgcaaacagataaaaattgcaatc--tctaaccctttactctttta 21303336  T
Q  108 -tttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttgg 206  Q
     ||||||| ||||| ||||   |||||||||||   ||||||||||| ||||| ||||||||||||| ||||||||||||||||||| |||||   ||||    
T  21303337 ttttatatagtcaa-ctta---aaataagtaacggaaattgtttggatgaaacaacaatctttgtggctacgatactctacttatcattttattatttgg 21303432  T
Q  207 taaacgatttggtacacttgcata 230  Q
    ||||||||||| ||||||||||||    
T  21303433 taaacgatttgatacacttgcata 21303456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 8765331 - 8765145
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||||||| |||   |||||||||||||| |||||||||| ||||||||||||| ||||||||||| |||||||||||||               
T  8765331 aggggattcgaagaatcttaactgctgcttacttttctgcaaccaaaac-aggtaaacttgctctgttgcaaacatataaaaattgcaa----------- 8765244  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    | |||||||||||  ||||||||||||||| ||||||||| ||||||||  ||| ||| |||||||  ||||||||||||||| ||||||||| |||||    
T  8765243 cctaacttttatactgtcaaacttacaaaactaagtaacaagaattgttcagacaaaaggacaatccatgtggatacgatactttacttatcactttat 8765145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 7 - 190
Target Start/End: Original strand, 16229833 - 16230004
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac 106  Q
    ||||||||||||||| | |||||||||||| | ||||||||| |||||||| | ||| ||||||||||||||||||||||||  ||||          ||    
T  16229833 ttcgaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaattcgctctgttgcaaacagataaaaattgca--actt----------ac 16229920  T
Q  107 ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
    ||||||| | |||||||||||||||||||||||  |||||||  |||| ||| |||||||  ||||||||||||||||||||||    
T  16229921 ttttataccatcaaacttacaaaaataagtaactagaattgtaaggacaaaaggacaatccctgtggatacgatactctactta 16230004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 7 - 227
Target Start/End: Original strand, 12805770 - 12805989
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac 106  Q
    ||||||||||||||| | |||||||||||||| |||||||| | ||||||  || || |||||||||||||||||||||||||    |||||||||| |     
T  12805770 ttcgaagaatcctaacccctgcttacttttctgcaaccaaatc-aggtaatttt-ctctgttgcaaacagataaaaattgcaatc--tctaaccctttaa 12805865  T
Q  107 ttttatatcgtcaaacttaca---aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatct 203  Q
    | || |||  |  ||| |  |   |||||||||||| | ||||||||||| ||||||||||||  |||||||| |||||||||||||||| |||||  ||    
T  12805866 tcttttattttataacgtcgacttaaaataagtaacgcaaattgtttggatgaaacgacaatccatgtggatatgatactctacttatcactttattact 12805965  T
Q  204 tggtaaacgatttggtacacttgc 227  Q
    ||||||| ||||||||||||||||    
T  12805966 tggtaaatgatttggtacacttgc 12805989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 103 - 227
Target Start/End: Original strand, 19171810 - 19171933
Alignment:
Q  103 taacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatc 202  Q
    |||||||||||||||||| || ||||||||||||||  | |||||||||||||||||||||||| ||||| ||| ||| |||| ||||||| |||||  |    
T  19171810 taacttttatatcgtcaacct-acaaaaataagtaatgcaaattgtttggacgaaacgacaatccttgtgaatatgatcctctgcttatcactttattac 19171908  T
Q  203 ttggtaaacgatttggtacacttgc 227  Q
    ||||||||| |||| ||| ||||||    
T  19171909 ttggtaaacaatttagtatacttgc 19171933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 821515 - 821606
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggta 220  Q
    |||||||||||| |||||||||  ||||||||| ||||  ||||||||||||||||||||||||| |||||  |||||||||||||||||||    
T  821515 aaataagtaacatgaattgtttacacgaaacgaaaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggta 821606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 41508591 - 41508367
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||| ||||||| ||| | ||| |||||||||| |||||||||| | |||| |||||| ||||||||||||||| |||||||||  || |||||||    
T  41508591 ggggattcaaagaatcttaaccgctggttacttttctgcaaccaaaac-atgtaa-cttgctttgttgcaaacagatacaaattgcaaatct-ctaaccc 41508495  T
Q  102 ttaact--tttat---atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatt 196  Q
    ||||||  |||||   ||||||||| |   ||||||||||||  | |||||||||||| |||||||||||   |  ||||||||| ||||| ||||| ||    
T  41508494 ttaactcttttattttatcgtcaaatt---aaaaataagtaatgcaaattgtttggactaaacgacaatccccgcagatacgatattctacctatcactt 41508398  T
Q  197 tatatcttggtaaacgatttggtacacttgc 227  Q
    |||  |||| |||||||||||||||||||||    
T  41508397 tattacttgataaacgatttggtacacttgc 41508367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 106 - 199
Target Start/End: Original strand, 8889130 - 8889223
Alignment:
Q  106 cttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    |||||||| |||||||||||||||||||||||||  |||||||| | |||||| |||||||  ||||||||| ||||||||||||||| |||||    
T  8889130 cttttataccgtcaaacttacaaaaataagtaacgagaattgttcgaacgaaaggacaatccctgtggatacaatactctacttatcactttat 8889223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 8170097 - 8170013
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaatt 85  Q
    ||||| ||||||||||||||| | |||| ||||||||| ||||||||| |||||||| | |||||||||||||||||||||||||    
T  8170097 aggggattcgaagaatcctaaccgctgcatacttttctgcaaccaaaaacaggtaaattcgctatgttgcaaacagataaaaatt 8170013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 10918004 - 10917918
Alignment:
Q  141 cgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||| ||||| |||||||| ||||||  ||||||||||||||||||||||||| |||||   |||||||||||||||||||||||||    
T  10918004 cgaactgtttagacgaaacaacaatccatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacacttgc 10917918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 21825870 - 21825965
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    ||||||||||| |||| |||||||||||||| | ||||  |||||||||||||||||||||| || |||||  || |||||||||||||||||||||    
T  21825870 aaataagtaacgcgaactgtttggacgaaacaaaaatccatgtggatacgatactctactta-cactttattactcggtaaacgatttggtacactt 21825965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 9 - 190
Target Start/End: Original strand, 27413778 - 27413944
Alignment:
Q  9 cgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaactt 108  Q
    ||||||||||||| | |||||||||||||| ||||||||| |||||||| | ||| ||||| ||||||||||||||||         ||||    |||||    
T  27413778 cgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaaatcgctctgttgaaaacagataaaaattg---------taac----aactt 27413864  T
Q  109 ttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
    ||||| |||||||| ||||||||||||||||| ||||||||  | ||||| |||||||  | |||||| |||||||||||||    
T  27413865 ttata-cgtcaaac-tacaaaaataagtaacaagaattgttcagtcgaaaggacaatccctttggatatgatactctactta 27413944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 12759459 - 12759388
Alignment:
Q  155 gaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||||||  |||||||||||||||||||||||||| |||||  |||||||||| ||||||||||||||    
T  12759459 gaaacgacaatacttgtggatacgatactctacttatcactttattacttggtaaacaatttggtacacttg 12759388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 10744984 - 10744902
Alignment:
Q  145 ttgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||| |||||||||||||||  | |||| |||||||||||||||||| |||||  ||||||||||||||||||| ||||||    
T  10744984 ttgtttagacgaaacgacaatccctatggaaacgatactctacttatcactttattacttggtaaacgatttggtaaacttgc 10744902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 28729038 - 28728972
Alignment:
Q  133 aagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||||||| ||||||||||||  ||||||||||||| ||||||||||||||||||||||||| |||||    
T  28729038 aagtaacgcgaattgtttggttgaaacgacaatctatgtggatacgatactctacttatcactttat 28728972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 18458457 - 18458522
Alignment:
Q  161 acaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||||||||||||||||||||||||||||| |||||  |||| ||||| ||||||||||||||    
T  18458457 acaatctttgtggatacgatactctacttatcactttattacttgataaacaatttggtacacttg 18458522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 5508560 - 5508336
Alignment:
Q  2 gggggttcgaagaatcct--aaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaac 99  Q
    |||| |||||||||||||  || ||||| |||||||||| |||| |||| || |||| |||||| | ||||||||||||||||||| |||  ||  ||||    
T  5508560 ggggattcgaagaatcctctaaccactg-ttacttttctgcaacaaaaaacatgtaa-cttgctctattgcaaacagataaaaatttcaaatctcttaac 5508463  T
Q  100 ccttaact-tttat---atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaat 195  Q
    ||||| || |||||   |||||||  ||||   ||||||||||| |||  |||||||||||||||||||||  ||||||||  |||||| |||||||| |    
T  5508462 ccttatctctttattttatcgtcac-ctta---aaataagtaacgcgagatgtttggacgaaacgacaatccatgtggatattatactc-acttatcact 5508368  T
Q  196 ttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||  ||||| ||| ||||||||||||||||    
T  5508367 ttattacttggcaaatgatttggtacacttgc 5508336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 8882996 - 8883084
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||| |||||||||||||||   | ||||| |||||| |||| ||||  ||||||||| |||||||||||||||||||||||||||||    
T  8882996 aggggattcgaagaatcctaactgcagcttaattttctgcaactaaaaataggtaaactcgctatgttgcaaacagataaaaattgcaa 8883084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 185
Target Start/End: Original strand, 19576105 - 19576265
Alignment:
Q  12 agaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaactttta 111  Q
    |||||||||| | |||||| ||||||| |||||||||  ||||||| |  || |||||||||||||||||||||||||           ||  |||||||    
T  19576105 agaatcctaaccgctgcttgcttttctgcaaccaaaaataggtaaattcactttgttgcaaacagataaaaattgcaa-----------ct--actttta 19576191  T
Q  112 tatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactct 185  Q
    || ||| |||||||||||| ||||||||  |||||||| |||||||| |||||||  | |||||||||||||||    
T  19576192 taccgttaaacttacaaaagtaagtaactagaattgttcggacgaaaggacaatccatctggatacgatactct 19576265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 215
Target Start/End: Complemental strand, 8319138 - 8319051
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatt 215  Q
    ||||||||||||| |||||||||| ||||||||| ||||  ||||||||| ||| ||||||||||| || ||  ||||||||||||||    
T  8319138 aaaataagtaacatgaattgtttgtacgaaacgataatccctgtggatactatattctacttatcacttcattacttggtaaacgatt 8319051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 19909937 - 19910020
Alignment:
Q  105 acttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctact 188  Q
    |||||||||  ||||||||||||||||||||||||  |||||||| | | |||| |||||||  ||||||||||||||||||||    
T  19909937 acttttatacggtcaaacttacaaaaataagtaactagaattgttcgaaagaaaggacaatccctgtggatacgatactctact 19910020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 18736672 - 18736769
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||||||| ||| |||||| |||||||||||||    ||| ||||||||| ||||||||| | |||||  |||||||||||||||||||||||||    
T  18736672 aaaataagtaacgcgagttgtttagacgaaacgacaacacctgtagatacgatattctacttat-actttattacttggtaaacgatttggtacacttg 18736769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 6290001 - 6289903
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||  |||||||| |  |||||| || ||||  |||||||| |||||||||||||||| |||||  |||||||||||||||| |||| ||||    
T  6290001 aaataagtaatgcgaattgtctacacgaaatgataatccatgtggatatgatactctacttatcactttattacttggtaaacgatttgatacatttgc 6289903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 129 - 199
Target Start/End: Original strand, 8557130 - 8557200
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||||||||||| | ||||||||  | ||||||||||||  ||||||||||||||||||||||||| |||||    
T  8557130 aaataagtaacgcaaattgtttaaatgaaacgacaatccatgtggatacgatactctacttatcactttat 8557200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 19167518 - 19167452
Alignment:
Q  120 aacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactcta 186  Q
    ||||||||||||||||||||  |||||||| |||||||| || ||||  ||||||||||||||||||    
T  19167518 aacttacaaaaataagtaactagaattgttcggacgaaaggataatccatgtggatacgatactcta 19167452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7494988 - 7495045
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaac 58  Q
    ||||| |||||| |||||||| | |||||||||||||||||||||||| |||||||||    
T  7494988 aggggattcgaataatcctaatccctgcttacttttctacaaccaaaaacaggtaaac 7495045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 31286017 - 31286112
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||||||   ||||||||||||||||| ||||||  ||||||||||||| |||| ||| || |||||  ||||||||| |||||||||||||||    
T  31286017 aaataagtaacggaaattgtttggacgaaac-acaatccctgtggatacgatattctagtta-cactttattacttggtaaatgatttggtacacttg 31286112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 10923238 - 10923150
Alignment:
Q  136 taacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacact 224  Q
    |||| |||| ||||| || ||||| |||||| | |||||||||||||| || |||||| |||||  ||||||||| |||||||||||||    
T  10923238 taacgcgaactgtttagatgaaacaacaatcctcgtggatacgatactgtaattatcactttattacttggtaaatgatttggtacact 10923150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 27542956 - 27543011
Alignment:
Q  169 tgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    ||||||||||||||||||||||| | ||||| ||||||||||||||||| |||||||    
T  27542956 tgtggatacgatactctacttat-actttatttcttggtaaacgatttgatacactt 27543011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20023426 - 20023512
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgca 88  Q
    ||||| ||| |||||||||||   || ||||||||||| ||||||||||  |||||| | ||| ||||||||||||||||||||||||    
T  20023426 aggggattcaaagaatcctaactgctacttacttttctgcaaccaaaact-ggtaaattcgctctgttgcaaacagataaaaattgca 20023512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 20023531 - 20023602
Alignment:
Q  119 aaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
    |||||||||||||||||||| | |||||||| |||||||| |||||||  ||| ||||| ||||| ||||||    
T  20023531 aaacttacaaaaataagtaagaagaattgttcggacgaaaggacaatccctgttgatacaatactttactta 20023602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 7478334 - 7478388
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgata 181  Q
    |||||||||||||  ||||||||||||| |||||||||||  |||||||||||||    
T  7478334 aaaaataagtaacgtgaattgtttggaccaaacgacaatcaatgtggatacgata 7478388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 8169992 - 8169922
Alignment:
Q  120 aacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
    ||||||||||||||||||||  |||||||| ||||||||  | ||||| ||||||||||||| | ||||||    
T  8169992 aacttacaaaaataagtaactagaattgttcggacgaaagaaaaatctctgtggatacgatattttactta 8169922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 21825770 - 21825829
Alignment:
Q  28 cttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||||||||| |||||||||  |||||| ||||||||||| ||||||||||||||||||||    
T  21825770 cttacttttctgcaaccaaaaa-aggtaa-cttgctatgttacaaacagataaaaattgcaa 21825829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 8143711 - 8143617
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    ||||||||||  ||| ||||||||| ||||||| ||||   |||||||| |||||||||||| || |||||  ||| ||||||||||||||||||||    
T  8143711 aaataagtaaagcgagttgtttggatgaaacgagaatcac-gtggatacaatactctactta-cactttattgcttagtaaacgatttggtacactt 8143617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 19909846 - 19909934
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||| ||| ||||||||||| | |||||||||||||| |||| |||| ||||||||   ||| | || |||| |||||||||||||||    
T  19909846 aggggattcaaagaatcctaaccgctgcttacttttctgcaacaaaaaacaggtaaatgcgcttttttacaaagagataaaaattgcaa 19909934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 10745101 - 10745040
Alignment:
Q  26 tgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||||| ||||| |||||||||| |||||| |||||| ||||||||| |||||||||||||||    
T  10745101 tgcttacatttctgcaaccaaaac-aggtaa-cttgctctgttgcaaatagataaaaattgcaa 10745040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 11518002 - 11518060
Alignment:
Q  169 tgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||| |||| ||||||||||| |||||  |||| | |||||||||||||||||||    
T  11518002 tgtggatatgatattctacttatcactttattacttgatgaacgatttggtacacttgc 11518060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 17155989 - 17155931
Alignment:
Q  28 cttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||||||||| ||||||||   |||||| |||||| |||||||||||||||||||||||||    
T  17155989 cttacttttctgcaaccaaat--aggtaa-cttgctctgttgcaaacagataaaaattgcaa 17155931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 2723733 - 2723790
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaatt 85  Q
    |||||||||||| | ||||||||  ||||||| |||||| |||||||||||||||||||||    
T  2723733 ctgcttacttttttgcaaccaaa--caggtaa-cttgctttgttgcaaacagataaaaatt 2723790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 7495094 - 7495151
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactc 184  Q
    |||||||||||||   |||||||||||||||||||| |||  ||||||| ||||||||    
T  7495094 aaaaataagtaacgttaattgtttggacgaaacgacgatccatgtggattcgatactc 7495151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 19171746 - 19171799
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaactt 60  Q
    ||||||||||||||| |||||| ||||||||| |||| |||| ||| |||||||    
T  19171746 ttcgaagaatcctaaccactgcatacttttctgcaacaaaaaacagataaactt 19171799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 19532380 - 19532319
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctact 188  Q
    |||| |||||||||  ||||||| ||||||||  ||||||  ||||||||||||||||||||    
T  19532380 aaaagtaagtaacaataattgttcggacgaaagaacaatccatgtggatacgatactctact 19532319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 190
Target Start/End: Complemental strand, 25756745 - 25756712
Alignment:
Q  157 aacgacaatctttgtggatacgatactctactta 190  Q
    ||||||||| ||||||||||||||||||||||||    
T  25756745 aacgacaatttttgtggatacgatactctactta 25756712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 8445922 - 8445859
Alignment:
Q  126 caaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
    |||||| | ||||| |||||| |||||||||||||||||||  |||||| || ||||||||||||    
T  8445922 caaaaacatgtaacgcgaatt-tttggacgaaacgacaatccatgtggacacaatactctactta 8445859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 11533017 - 11533073
Alignment:
Q  170 gtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||||| |||||||||||||| |||||   |||||||| | |||||||||||||    
T  11533017 gtggatacggtactctacttatcactttattatttggtaaatgttttggtacacttg 11533073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 157 - 221
Target Start/End: Original strand, 21019625 - 21019688
Alignment:
Q  157 aacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtac 221  Q
    |||||||||| ||||||||| |||||||||||||| | |||||  ||||||| | ||||||||||    
T  21019625 aacgacaatccttgtggataagatactctacttat-actttattacttggtagatgatttggtac 21019688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 21325558 - 21325480
Alignment:
Q  9 cgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||||||| ||| | || ||||||||||| ||||||||   |||||| |||||| ||||||||| |||||||||||||||    
T  21325558 cgaagaatcataaccgctacttacttttctgcaaccaaatt-aggtaa-cttgctctgttgcaaatagataaaaattgcaa 21325480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 2e-63; HSPs: 94)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 7 - 271
Target Start/End: Original strand, 1848107 - 1848376
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac 106  Q
    ||||||||||| ||| | |||||||||||||| |||||||||| ||||||||||||| |||| |||||||||||||||||||||   ||||||||||||     
T  1848107 ttcgaagaatcataaccgctgcttacttttctgcaaccaaaac-aggtaaacttgctctgtttcaaacagataaaaattgcaagctctctaacccttaat 1848205  T
Q  107 ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttgg 206  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||   |||||||||||||| ||||||||| |||||  |||||    
T  1848206 ttttatatcgtcaaacttacaaaaataagtaacgcaaattgtttggacgaaaggacaatcccagtggatacgatactgtacttatcactttattacttgg 1848305  T
Q  207 taaacgatttggtacacttg-cat-------atcaattttttggcgccgttgacgagtattgttgatattttc 271  Q
    |  || |||||||||||||| |||       ||||| ||||||||||||||| |||| |||||||||||||||    
T  1848306 t--acaatttggtacacttgccattcgacccatcaagtttttggcgccgttgtcgaggattgttgatattttc 1848376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 2564043 - 2563815
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||||||| ||||||| | || ||||||||||| ||| | ||| |||||||||||||| ||||||||||||||||||||| |||  || |||||||    
T  2564043 ggggattcgaaggatcctaaccgctacttacttttctgcaaactaaagcaggtaaacttgctctgttgcaaacagataaaaatttcaactct-ctaaccc 2563945  T
Q  102 ttaacttttat---atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaattta 198  Q
    ||| |||||||   ||||| || |||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||    
T  2563944 ttatcttttattatatcgtgaa-cttacagaaataagtaacacaaattgtttggacgaaacgacaatccttgtggatacgatactctactta-cacttta 2563847  T
Q  199 tatcttggtaaacgatttggtacacttgcata 230  Q
    |  |||||||||||||||||||||||||||||    
T  2563846 ttacttggtaaacgatttggtacacttgcata 2563815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 76 - 225
Target Start/End: Original strand, 13759808 - 13759957
Alignment:
Q  76 gataaaaattgcaagacttctaacccttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggat 175  Q
    |||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||    
T  13759808 gataaaaattgcaagctttctaaaccttaacttttatatcgtcaaacttacaaaaataagtaacgcgaactgtttggacgaaacgacaatccttgtggat 13759907  T
Q  176 acgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    | |||||||||||||||| |||||   |||||||||||||||||||||||    
T  13759908 atgatactctacttatcactttattaattggtaaacgatttggtacactt 13759957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 7 - 216
Target Start/End: Original strand, 39273055 - 39273263
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac 106  Q
    ||||||| ||||||| | |||||||||||||| |||||||||  ||||||||||||| ||||||||| |||| ||| ||||||   || |||||||||||    
T  39273055 ttcgaaggatcctaaccgctgcttacttttctgcaaccaaaaataggtaaacttgctctgttgcaaatagattaaatttgcaact-ttataacccttaac 39273153  T
Q  107 ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttgg 206  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||  | || |||||||||||||||||||| |||||  ||| |    
T  39273154 ttttatatcgtcaaacttacaaaaataagtaacacaaattatttggacgaaacgacaatccatatgaatacgatactctacttatcactttattacttag 39273253  T
Q  207 taaacgattt 216  Q
    ||||| ||||    
T  39273254 taaacaattt 39273263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 13 - 225
Target Start/End: Original strand, 3329542 - 3329755
Alignment:
Q  13 gaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttat 112  Q
    ||||||||| | |||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||  || |||||||||| |||| ||    
T  3329542 gaatcctaaccgctgcttacttttctgcaaccaaaaacaagtaaacttgctatgttgcaaacagataaaaattgcaactct-ctaacccttatctttcat 3329640  T
Q  113 -at-cgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaa 210  Q
     || ||| ||||||||||||||||||||| |  |||||||||| ||||||||||||  ||||||||||||||||||||||||| |||||  |||||||||    
T  3329641 tatacgttaaacttacaaaaataagtaacgcagattgtttggatgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaa 3329740  T
Q  211 cgatttggtacactt 225  Q
      ||||| |||||||    
T  3329741 taatttgatacactt 3329755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 8053936 - 8054157
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||| |||||||||||   |||||||||||||| |||||||||| ||||||||||||||| ||||||| |||||||| || |||| ||| ||||     
T  8053936 aggggattcaaagaatcctaactgctgcttacttttctgcaaccaaaac-aggtaaacttgctatattgcaaatagataaaatttacaagtcttttaact 8054034  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttata 200  Q
    |||| ||||||||||||||| |||||||||||||||||   ||||||||||||   |||||||||   |||||||||||||||||| |||||| |||||     
T  8054035 cttatcttttatatcgtcaa-cttacaaaaataagtaatgagaattgtttgga---aacgacaattcatgtggatacgatactctaattatcactttatt 8054130  T
Q  201 tcttggtaaacgatttggtacacttgc 227  Q
     ||||||||||||||||||||||||||    
T  8054131 acttggtaaacgatttggtacacttgc 8054157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 11 - 225
Target Start/End: Original strand, 8978889 - 8979103
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccctt--aactt 108  Q
    |||||||||||   ||||||| |||||| ||||||||| |||||||||||| | | |||||||||||| ||||||||||  |  |||||||||  | |||    
T  8978889 aagaatcctaactgctgcttatttttctgcaaccaaaaacaggtaaacttgttctattgcaaacagatgaaaattgcaaatc--ctaacccttttatctt 8978986  T
Q  109 ttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggta 208  Q
    |||||| ||||||||||| |||||||||||  ||||||||||||||||||| ||||||  |||||||| |||||||||||||||| |||||  |||||||    
T  8978987 ttatattgtcaaacttaccaaaataagtaatgcgaattgtttggacgaaacaacaatccatgtggatatgatactctacttatcactttattacttggta 8979086  T
Q  209 aacgatttggtacactt 225  Q
    || ||||||||||||||    
T  8979087 aatgatttggtacactt 8979103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 28 - 227
Target Start/End: Original strand, 18368879 - 18369079
Alignment:
Q  28 cttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagactt-ctaacccttaa-cttttatatc-gtcaaactt 124  Q
    ||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||| ||||| ||||||||| | |||||||||  ||||| |||    
T  18368879 cttacttttctacaaccaaaagcaggtaa-cttgctttgttgcaaacagataaaaattgcacgactttctaaccctttatcttttatatttgtcaa-ctt 18368976  T
Q  125 acaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacact 224  Q
    | |||||||||||||  |||||||||||||||||||||||||  | ||||||| ||||||||||||||| |||||  |||||||||| |||| |||||||    
T  18368977 ataaaaataagtaactagaattgtttggacgaaacgacaatccctatggatacaatactctacttatcactttattacttggtaaactatttagtacact 18369076  T
Q  225 tgc 227  Q
    |||    
T  18369077 tgc 18369079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 20582475 - 20582259
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagac-ttctaacccttaa 105  Q
    |||||||||||||||   |||||||||||||| |||||||||| ||||||||||||| ||||||||| |||||||||||||||  | || |||||||||     
T  20582475 ttcgaagaatcctaactgctgcttacttttctgcaaccaaaac-aggtaaacttgctctgttgcaaatagataaaaattgcaaatctttttaacccttac 20582377  T
Q  106 cttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttg 205  Q
    ||||||||||||| |||||| |||| ||||||||  ||||||| |||| |||||||| |||  ||||||||||||||   |||||||| |||||   |||    
T  20582376 cttttatatcgtc-aacttataaaattaagtaacgagaattgtatggaagaaacgacgatccctgtggatacgatac---acttatcactttattaattg 20582281  T
Q  206 gtaaacgatttggtacacttgc 227  Q
    |||||||||||||||| |||||    
T  20582280 gtaaacgatttggtacccttgc 20582259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 96 - 227
Target Start/End: Original strand, 8054458 - 8054588
Alignment:
Q  96 taacccttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaat 195  Q
    |||| |||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||   |||| |||||||||||||||||||| |    
T  8054458 taactcttatcttttatatcgtcaa-cttacaaaaataagtaacaagaattgtttggacgaaacgacaattcctgtgaatacgatactctacttatcact 8054556  T
Q  196 ttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||   |||||||||||||||||||||||||    
T  8054557 ttattatttggtaaacgatttggtacacttgc 8054588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 11803294 - 11803108
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| |||||| |||||||| | ||| |||||| ||| |||||||||| ||||||||||||| |||||||||||  |||||||| |||               
T  11803294 aggggattcgaataatcctaaccgctggttacttctctgcaaccaaaac-aggtaaacttgctctgttgcaaacaactaaaaatttcaa----------- 11803207  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    | |||||||||||  |||||||||||||||||||||||| |||||||||||||||||| |||||||  ||||||||||||||||||||||||| |||||    
T  11803206 cctaacttttatactgtcaaacttacaaaaataagtaacgcgaattgtttggacgaaaggacaatccctgtggatacgatactctacttatcactttat 11803108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 25 - 227
Target Start/End: Original strand, 9731524 - 9731726
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact--tttat---atcgtca 119  Q
    |||||||||||| | ||||||||| ||||||| ||||||||||| || | |||||||||||||||  || ||||  | |||||  |||||   ||| |||    
T  9731524 ctgcttacttttatgcaaccaaaaacaggtaa-cttgctatgttacacatagataaaaattgcaaatct-ctaattcgtaactcttttattttatcatca 9731621  T
Q  120 aacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggt 219  Q
    ||||   ||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||   |||  |||||||||||||    
T  9731622 aact---aaaaataagtaacgcgaattgtttggacgaaacgacaatccttgtggttacgatactctacttatcactttactactttttaaacgatttggt 9731718  T
Q  220 acacttgc 227  Q
    ||||||||    
T  9731719 acacttgc 9731726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 16058906 - 16059083
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| |||||||||||||||   ||||||||||| || ||||||||| || ||||| ||||| |||||||||||||||||||||| ||  |            
T  16058906 aggggattcgaagaatcctaacagctgcttactttactgcaaccaaaaacaagtaaatttgctctgttgcaaacagataaaaattgaaactc-------- 16058997  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
        ||||||||| |||||||||||||||||||||||||   |||||||||||||||| |||||||  ||||||||||||||||||||||    
T  16058998 ----acttttataccgtcaaacttacaaaaataagtaactaaaattgtttggacgaaaggacaatccatgtggatacgatactctactta 16059083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 5108790 - 5108566
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||| ||||||||||| | |||||||||||||| ||||||||| || ||||||||||| | |||||||||||||||||||| ||  || ||||||     
T  5108790 ggggattcaaagaatcctaaccgctgcttacttttctgcaaccaaaatcaagtaaacttgctctcttgcaaacagataaaaattgtaactct-ctaacca 5108692  T
Q  102 ttaactttt-----atatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatt 196  Q
    |  ||| ||     |||||||||| ||||  |||||||||    |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||    
T  5108691 tatactcttttattatatcgtcaa-ctta--aaaataagtgtt-cgaattgtttggacgaaacgacaatccttgtggatacgatactctactta-cactt 5108597  T
Q  197 tatatcttggtaaacgatttggtacacttgc 227  Q
    |||  |||||||||  |||||||||||||||    
T  5108596 tattacttggtaaataatttggtacacttgc 5108566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 6042676 - 6042462
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||| ||||||||||| | ||||||| |||||| |||||||||  |||||||||| || ||||||||||| ||||||||||||| |  |||| |     
T  6042676 aggggattcaaagaatcctaaccgctgcttatttttctgcaaccaaaaaaaggtaaactt-ctctgttgcaaacatataaaaattgcaaca--tctatct 6042580  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttata 200  Q
     |||    ||||| |||||||||   ||||||||||||| | ||||||||| |||||||||||| || |||||||||||||||||||||| || |||||     
T  6042579 ttta----ttataccgtcaaact---aaaaataagtaacgcaaattgtttgaacgaaacgacaacctctgtggatacgatactctactta-cattttatt 6042488  T
Q  201 tcttggtaaacgatttggtacacttg 226  Q
     | |||||||||||||| ||||||||    
T  6042487 acatggtaaacgatttgatacacttg 6042462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 8877647 - 8877455
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttact-tttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaag-acttctaa 98  Q
    ||||| ||| ||||||||||| | ||||||||| ||| | |||||||||  ||||||||||||| ||||||||||||||||||||||||||   || |||    
T  8877647 aggggattcaaagaatcctaaccgctgcttactatttttgcaaccaaaat-aggtaaacttgctctgttgcaaacagataaaaattgcaagtttttttaa 8877549  T
Q  99 cccttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatca 193  Q
    |||||||||||||||  ||| |||||| |||||||||||    ||||||||| ||| ||| | |||||  |||||||||||||||||||||||||    
T  8877548 cccttaacttttatactgtc-aacttataaaaataagtacagagaattgtttcgacaaaagggcaatccatgtggatacgatactctacttatca 8877455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 18662539 - 18662441
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||   |||||||||||||||| |||||||||    
T  18662539 aaataagtaacgtgaattgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttagtgcttggtaaacgatttgatacacttgc 18662441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 11 - 225
Target Start/End: Complemental strand, 3734811 - 3734598
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact--- 107  Q
    |||| |||||| || ||||||||||||| |||||||||| |||||| |||||| |||||||||||||||||| ||||||  ||| ||||||||||||       
T  3734811 aagagtcctaaccattgcttacttttctgcaaccaaaac-aggtaa-cttgctctgttgcaaacagataaaatttgcaat-ctt-taacccttaactctt 3734716  T
Q  108 ----tttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatct 203  Q
        ||||||||||||| ||||   |||||||||||  ||||||||||||| |||| |||||   ||||||||||||||||||||||||| |||||  ||    
T  3734715 ttattttatatcgtcaa-ctta---aaataagtaacgtgaattgtttggaccaaacaacaattcatgtggatacgatactctacttatcactttattact 3734620  T
Q  204 tggtaaacgatttggtacactt 225  Q
    |||||||  |||||||||||||    
T  3734619 tggtaaaaaatttggtacactt 3734598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 142 - 227
Target Start/End: Original strand, 23099966 - 23100051
Alignment:
Q  142 gaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||   |||||||||||||||||||||||||    
T  23099966 gaattgtttggacgaaacgacaatctatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacacttgc 23100051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 7 - 225
Target Start/End: Complemental strand, 16365925 - 16365707
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac 106  Q
    ||||||||||||||| | |||||||||||| | ||||||||| || |||| ||||||  | |||||| |||| ||||||| ||  || |||| |||||||    
T  16365925 ttcgaagaatcctaaccgctgcttacttttttgcaaccaaaaacatgtaa-cttgctcagatgcaaatagatcaaaattgaaaatct-ctaaaccttaac 16365828  T
Q  107 tttt-----atatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatat 201  Q
    | ||     |||||||||| ||||  |||||||||||| ||||||||||| || |||||||||||  ||||||||||||||||||||| | | |||||      
T  16365827 tcttttattatatcgtcaa-ctta--aaaataagtaacgcgaattgtttgcacaaaacgacaatccatgtggatacgatactctactttttactttatta 16365731  T
Q  202 cttggtaaacgatttggtacactt 225  Q
    ||||||||||||||||||||||||    
T  16365730 cttggtaaacgatttggtacactt 16365707  T

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Target: chr7; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 10587024 - 10587123
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||||| || |||||| |||||||||||||||  ||| ||||||||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  10587024 aaaataagtaacatgagttgtttagacgaaacgacaatccctgtagatacgatactctacttatcactttattacttggtaaacgatttggtacacttgc 10587123  T

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Target: chr7; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 11 - 227
Target Start/End: Complemental strand, 13418737 - 13418534
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaactttt 110  Q
    ||||||||||| | ||||||||||| || ||| |||||| ||||||||||||| |||||||||||||||||||||||||           | ||||||||    
T  13418737 aagaatcctaaccgctgcttactttgctgcaatcaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaa-----------cctaactttt 13418650  T
Q  111 atatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatca-atttatatcttggtaa 209  Q
    ||| |||| |||||| |||||||||||||   || ||||||||||||| |||||||  | |||||||||||||||||||||||  |||||  |||||| |    
T  13418649 ataccgtc-aacttaaaaaaataagtaacgacaaatgtttggacgaaaggacaatccctatggatacgatactctacttatcacttttattacttggtta 13418551  T
Q  210 acgatttggtacacttgc 227  Q
    |||| |||||||||||||    
T  13418550 acga-ttggtacacttgc 13418534  T

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Target: chr7; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 28 - 199
Target Start/End: Original strand, 7492163 - 7492334
Alignment:
Q  28 cttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaactttt-----atatcgtcaaac 122  Q
    ||||||||||| ||||||||| ||||||| |||||| |||||||||||| ||||||||||||  || ||||||||||||| ||     ||||| |||||     
T  7492163 cttacttttctgcaaccaaaaacaggtaa-cttgctctgttgcaaacagttaaaaattgcaaatct-ctaacccttaactcttttattatatcatcaaaa 7492260  T
Q  123 ttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    |   ||||||||||||  | ||||||||| ||||||| |||||| |||||||||||||||||||||||||| |||||    
T  7492261 t---aaaaataagtaatgcaaattgtttgaacgaaacaacaatccttgtggatacgatactctacttatcattttat 7492334  T

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Target: chr7; HSP #24
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 9864327 - 9864425
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||| | |||||||| ||||||||||||||| ||||||||| |||||||||||||||| |||||  |||||||||| |||||||||||||||    
T  9864327 aaataagtaacgcaaattgtttagacgaaacgacaatccttgtggatatgatactctacttatcactttattacttggtaaacaatttggtacacttgc 9864425  T

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Target: chr7; HSP #25
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 13277717 - 13277537
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||| ||||||||||| | || |||||||||||||||||||||| |||| || | ||| | | |||||||||||||||||||||               
T  13277717 aggggattcaaagaatcctaatcgctacttacttttctacaaccaaaac-aggtcaattcgctctatagcaaacagataaaaattgcaa----------- 13277630  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatca 193  Q
    | ||||||||||| ||| |||||||||||||||| ||||| |||||||| |||||||| |||||||  |||||||||||||||||| ||||||    
T  13277629 cctaacttttataccgttaaacttacaaaaataattaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctatttatca 13277537  T

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Target: chr7; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 25 - 222
Target Start/End: Complemental strand, 17077317 - 17077133
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttatatcgtcaaactt 124  Q
    |||||||||||||| ||| |||||| |||||||||| || | |||||||||||||||||||||||         |||  |||||||||| |||||| |||    
T  17077317 ctgcttacttttctgcaaacaaaac-aggtaaacttactctattgcaaacagataaaaattgcaa---------ccc--aacttttataccgtcaa-ctt 17077231  T
Q  125 acaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtaca 222  Q
    |||||||||||||||| |||||||||||||||||||||||||    ||||||| ||||||||| ||||| |||||   ||| ||||| ||||||||||    
T  17077230 acaaaaataagtaacatgaattgtttggacgaaacgacaatccccatggatacaatactctacctatcactttattatttgataaacaatttggtaca 17077133  T

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Target: chr7; HSP #27
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 11221163 - 11221263
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||||||||| | ||||||||  ||||||||||||||  ||||||||| |||||||||||||||||||||  ||| |||||||||||||||||||||    
T  11221163 aaaaataagtaacgcaaattgtttacacgaaacgacaatccctgtggatacaatactctacttatcaatttattacttagtaaacgatttggtacacttg 11221262  T
Q  227 c 227  Q
    |    
T  11221263 c 11221263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 25 - 225
Target Start/End: Original strand, 17153051 - 17153251
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact-------tttatatcgt 117  Q
    |||||||||||||| ||||||||| ||||||| |||||| ||||||||||||||||||||  |||    ||||||||||| ||       ||||| ||||    
T  17153051 ctgcttacttttctgcaaccaaaaacaggtaa-cttgctttgttgcaaacagataaaaataacaatc--tctaacccttatctcttttattttatgtcgt 17153147  T
Q  118 caaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttg 217  Q
    ||| ||||   ||||||||||| |||  ||||| |||||||||||||||| ||||||||||||||||||||||||| ||| |  |||||||||| |||||    
T  17153148 caa-ctta---aaataagtaacgcgagctgtttagacgaaacgacaatctatgtggatacgatactctacttatcactttcttacttggtaaactatttg 17153243  T
Q  218 gtacactt 225  Q
     |||||||    
T  17153244 atacactt 17153251  T

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Target: chr7; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 56 - 227
Target Start/End: Complemental strand, 7318445 - 7318273
Alignment:
Q  56 aacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact-------tttatatcgtcaaacttacaaaaataagtaacacgaattgt 148  Q
    |||||||| |||||||||||||||||||||||||    ||||||||||| ||       ||||||||||||| ||||   ||||||||||  |||  |||    
T  7318445 aacttgctctgttgcaaacagataaaaattgcaatc--tctaacccttatctcttttattttatatcgtcaa-ctta---aaataagtaatgcgagctgt 7318352  T
Q  149 ttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    || |||||||||||||||  ||||||||||||||||||||||||| |||||  ||||||||||||| ||||||||||||    
T  7318351 ttagacgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatatggtacacttgc 7318273  T

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Target: chr7; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 31493029 - 31492930
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||| || |||||||||||| |||||||||||  ||||||||||||||||||||||||| |||||  | |||||||||||||| |||||||||    
T  31493029 aaaataagtaaaacaaattgtttggacaaaacgacaatccatgtggatacgatactctacttatcactttattacctggtaaacgatttgatacacttgc 31492930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 5530119 - 5530025
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacac 223  Q
    ||||||||||||| ||||||||||||||||||| ||||| |||||||||||| || ||||||||| |||||  |||||||||| |||||||||||    
T  5530119 aaataagtaacacaaattgtttggacgaaacgaaaatctctgtggatacgatgctttacttatcattttattacttggtaaacaatttggtacac 5530025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 9574631 - 9574407
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||| |||||||||||   ||| |||||||||| ||| |||| |||||| | |||||| | ||||||||||||||||||| |||   |||||||||    
T  9574631 ggggattcaaagaatcctaactgctgtttacttttcttcaaacaaa-ccaggtta-cttgctctattgcaaacagataaaaattacaat--ttctaaccc 9574536  T
Q  102 ttaact-------tttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaa 194  Q
    ||||||       ||||||||||||| ||||   |||||| |||| ||| | |||| |||||||| ||||||| ||| |||||||||||||||||||||     
T  9574535 ttaactcttttattttatatcgtcaa-ctta---aaataaataacgcgagtcgtttagacgaaacaacaatctctgtagatacgatactctacttatcac 9574440  T
Q  195 tttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||  ||||||||||||||| ||||||||||    
T  9574439 tttattccttggtaaacgatttagtacacttgc 9574407  T

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Target: chr7; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 105 - 199
Target Start/End: Complemental strand, 4449102 - 4449008
Alignment:
Q  105 acttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| |||| ||  ||||||||| ||||| ||||||||| |||||    
T  4449102 acttttataccgtcaaacttacaaaaataagtaacaagaattgtttggacaaaaggacagtccctgtggatacaatactttacttatcactttat 4449008  T

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Target: chr7; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 4579195 - 4579098
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||||||||||||||||| ||| |||||||| | |||||||||||||||||||||| | ||||  ||| ||||||||||||| ||||||||    
T  4579195 aaataagtaacacgaattgtttggacaaaaagacaatctctttggatacgatactctacttatc-acttattacttagtaaacgatttggaacacttgc 4579098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 4786060 - 4785837
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaat--tgcaagacttctaaccctta 104  Q
    ||||||||||||||| | |||||||||||||| ||||||||| ||||||| |||||| | ||||||| |||||||||   |  || |  |||||||||||    
T  4786060 ttcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaa-cttgctctattgcaaatagataaaaaaaattaaaaatctctaaccctta 4785962  T
Q  105 act-------tttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaattt 197  Q
    |||       ||||||||||||| ||   |||||||||||||  ||| || ||||||||||||||||||  |||||||  |||||||||||||||| |||    
T  4785961 actcttttattttatatcgtcaa-ct---aaaaataagtaacgtgaagtgcttggacgaaacgacaatccctgtggatgtgatactctacttatcacttt 4785866  T
Q  198 atatcttggtaaacgatttggtacacttgc 227  Q
    ||  |||||| ||||||||| |||||||||    
T  4785865 attacttggt-aacgatttgatacacttgc 4785837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 12329843 - 12329682
Alignment:
Q  67 ttgcaaacagataaaaattgcaagacttctaacccttaactttt-----atatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacga 161  Q
    |||||||||||||| ||||||||| |||||||| | |||| |||     |||||||||| ||||  |||||||||||| || ||| ||||| | ||||||    
T  12329843 ttgcaaacagataataattgcaag-cttctaactcctaacatttttattatatcgtcaa-ctta--aaaataagtaacgcggattatttgggcaaaacga 12329748  T
Q  162 caatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||| |||||||||| |||||||| |||||||||| |  ||||||||||||||||||||| ||||    
T  12329747 caatccttgtggatactatactctatttatcaatttcttacttggtaaacgatttggtacatttgc 12329682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 10584487 - 10584584
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||||||||||||||||||  | ||||||||||||  ||||||||||||||| | ||||||| |||||  |||| ||||||||||||||||||||    
T  10584487 aaataagtaacacgaattgtttctatgaaacgacaatccatgtggatacgatactttgcttatcactttattacttgataaacgatttggtacacttg 10584584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 1872884 - 1872785
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||||||||||||||| | ||||||||||  | ||||||||||||||||||||||||| | |||  ||| || |||||||||  ||||||||    
T  1872884 aaaataagtaacacgaattgtttgtatgaaacgacaacttatgtggatacgatactctacttatcattgtattacttagtgaacgatttgtcacacttgc 1872785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 7397361 - 7397280
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||||||||||||| | |||||||||||||| ||||||||| ||| | |||||| | |||||||||||||||||||||||||    
T  7397361 ttcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacagat-aacttgttttgttgcaaacagataaaaattgcaa 7397280  T

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Target: chr7; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 9245279 - 9245181
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||||||||||||||  |||||| |||||||  ||||||||||||||||| |||| || ||| |  |||||||||||||| |||||| ||||    
T  9245279 aaataagtaacacgaattgtttaaacgaaatgacaatccatgtggatacgatactctgcttaccatttttttacttggtaaacgattaggtacagttgc 9245181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 9500542 - 9500444
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||  |||||||||| |||||||| |||||| ||||||||||||||||||| | ||||  ||||  ||||||||| ||||| ||||||||||    
T  9500542 aaataagtaatgcgaattgtttagacgaaacaacaatccttgtggatacgatactctaatgatcacattattacttggtaaatgattttgtacacttgc 9500444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 10937700 - 10937602
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||   ||||||||||   ||||||||||||  ||||||||||||||| ||||||||| |||||  |||||||||||||||| |||||||||    
T  10937700 aaataagtaatgtgaattgtttgattgaaacgacaatccatgtggatacgatactatacttatcactttattacttggtaaacgatttgatacacttgc 10937602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 10648677 - 10648588
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttg 217  Q
    ||||||||||||||||||||||| || ||||||||||||  || | ||| ||||||||| |||||| |||||  ||||||||||||||||    
T  10648677 aaaataagtaacacgaattgtttagatgaaacgacaatccgtgcgcatatgatactctatttatcactttattacttggtaaacgatttg 10648588  T

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Target: chr7; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 2350746 - 2350846
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||  |||| || ||| ||||||| |||||||||||  ||||||||||||| |||||||| || |||||  ||||||||| |||||||||||||||    
T  2350746 aaaaatatttaacgcggattatttggacaaaacgacaatccatgtggatacgataatctacttagcagtttattacttggtaaatgatttggtacacttg 2350845  T
Q  227 c 227  Q
    |    
T  2350846 c 2350846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 227
Target Start/End: Complemental strand, 4818936 - 4818837
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||||||||  ||| || ||||||||||||||||||  |||||||  |||||||||||||||| |||||  |||||| ||||||||| ||||||||    
T  4818936 aaaaataagtaacgtgaagtgcttggacgaaacgacaatccctgtggatgtgatactctacttatcactttattacttggt-aacgatttgatacacttg 4818838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 12181708 - 12181608
Alignment:
Q  128 aaaataagtaacacgaattgtttgg-acgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||||||| |||||||||||| |||||||||||||   |||||||||| |||||||||| ||| |||||  |||  |||||||||||||| |||||    
T  12181708 aaaataagtaactcgaattgtttgggacgaaacgacaattcatgtggatacggtactctacttctcactttattactttataaacgatttggtatacttg 12181609  T
Q  227 c 227  Q
    |    
T  12181608 c 12181608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 227
Target Start/End: Original strand, 16297731 - 16297919
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttatatcgtcaaactt 124  Q
    |||||||||||||| |||||||||  |||||| ||| || ||||||||||| |||||||||||||   ||||||||||||||| || | |        ||    
T  16297731 ctgcttacttttctgcaaccaaaaataggtaa-cttactctgttgcaaacatataaaaattgcaat--ttctaacccttaactcttttgt--------tt 16297819  T
Q  125 acaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacact 224  Q
    |   ||||||||||   ||||||||||||||||| |||||||  |||| |||||||| |||||||||||  ||||  |||||||||  ||||||||||||    
T  16297820 a---aaataagtaatgtgaattgtttggacgaaatgacaatccatgtgaatacgataatctacttatcacattattacttggtaaattatttggtacact 16297916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 1584642 - 1584545
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||| ||| |||||| |||||||| ||||||  |||||||||||||||| |||||||| |||||  ||||||||| || |||||||||||||    
T  1584642 aaaataagtaacgcgatttgtttagacgaaacaacaatccctgtggatacgatactc-acttatcactttattacttggtaaatga-ttggtacacttgc 1584545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 17191096 - 17191175
Alignment:
Q  10 gaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||||||||||| |||| ||| ||||||| ||||||||| |||||||| | ||| ||||| |||||||||||||||||||    
T  17191096 gaagaatcctaatcactactttcttttctgcaaccaaaaacaggtaaaatcgctctgttggaaacagataaaaattgcaa 17191175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 4986654 - 4986556
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||||||| |||  | ||| |||||||||||||||  ||||| ||| |||||||||| | || |||||  |||||||||||||||||||||||||    
T  4986654 aaaataagtaacgcgagctatttagacgaaacgacaatccatgtgggtactatactctactcagcactttattacttggtaaacgatttggtacacttg 4986556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 4990752 - 4990654
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||||||| |||  | ||| |||||||||||||||  ||||| ||| |||||||||| | || |||||  |||||||||||||||||||||||||    
T  4990752 aaaataagtaacgcgagctatttagacgaaacgacaatccatgtgggtactatactctactcagcactttattacttggtaaacgatttggtacacttg 4990654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 8313291 - 8313488
Alignment:
Q  26 tgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttatatcgtcaaactta 125  Q
    ||||||||||||| |||||||||  |||||| |||||| ||||| |||||||||||||||||||    |||||||||||||| || |||  |  | |||     
T  8313291 tgcttacttttctgcaaccaaaat-aggtaa-cttgctctgttgaaaacagataaaaattgcaatc--tctaacccttaactcttttattttataccttc 8313386  T
Q  126 ca---aaaataagtaacacgaat---tgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggt 219  Q
     |   |||||||||||||| | |   ||||| |||||||||||||||  ||||||||||||| ||||||||||| |||||  ||||||||| ||||| ||    
T  8313387 aacttaaaataagtaacacaattagttgtttagacgaaacgacaatccctgtggatacgataatctacttatcactttattacttggtaaatgattttgt 8313486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 9916664 - 9916566
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||||  |||||||||  ||||| ||||||  ||||||||||||||||||||||| | |||||  | ||||||| ||||||||| ||||||    
T  9916664 aaataagtaacacatattgtttggttgaaactacaatccatgtggatacgatactctacttattactttattacgtggtaaatgatttggtatacttgc 9916566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 9924576 - 9924478
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||||  |||||||||  ||||| ||||||  ||||||||||||||||||||||| | |||||  | ||||||| ||||||||| ||||||    
T  9924576 aaataagtaacacatattgtttggttgaaactacaatccatgtggatacgatactctacttattactttattacgtggtaaatgatttggtatacttgc 9924478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 14195974 - 14196071
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||| ||||||||||||||||||| | |||  ||||||||||| |||| |||||| || |||||   ||| |||||||||||||||||||||    
T  14195974 aaataagtaacgcgaattgtttggacgaaacaataattcttgtggatacggtactttactta-cactttattatttgataaacgatttggtacacttgc 14196071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 21230410 - 21230312
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||||| ||||| || |||||||||| ||||  | || |||||||||||||||||||| |||||   ||||||||||||||| || ||||||    
T  21230410 aaataagtaacacaaattgcttagacgaaacgataatccctatgaatacgatactctacttatcattttattatttggtaaacgatttgatatacttgc 21230312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 227
Target Start/End: Complemental strand, 1587881 - 1587681
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac------ttttatatcgtc 118  Q
    |||||||||||||| ||||||| |   ||||| |||||| ||||||||||| |||||||||||||    ||||||||| ||       ||||||||||||    
T  1587881 ctgcttacttttctgcaaccaaga---ggtaa-cttgctctgttgcaaacaaataaaaattgcaatctctctaaccctaaatcttttattttatatcgtc 1587786  T
Q  119 aaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttgg 218  Q
    |||   |||||| || ||||| ||||||||||||| ||||| || |||| ||| |||| ||||||||| |||||| ||||   ||| |||||||||||||    
T  1587785 aaa---acaaaa-taggtaacgcgaattgtttggatgaaacaactatctatgtagatatgatactctaattatcactttactacttagtaaacgatttgg 1587690  T
Q  219 tacacttgc 227  Q
    |||| ||||    
T  1587689 tacatttgc 1587681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 226
Target Start/End: Original strand, 14755135 - 14755228
Alignment:
Q  133 aagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||||||  |||||| |||||||| |||||  ||||||||| |||||||||||| ||| ||||   |||| ||||||||||||||||||||    
T  14755135 aagtaacacgggttgtttagacgaaacaacaatacttgtggatatgatactctacttctcactttactacttgataaacgatttggtacacttg 14755228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 17203124 - 17203059
Alignment:
Q  126 caaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttat 191  Q
    |||||||||||||| || |||||||||||||||||||||||   ||| ||||||||||||||||||    
T  17203124 caaaaataagtaacgcggattgtttggacgaaacgacaatccccgtgaatacgatactctacttat 17203059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 22339312 - 22339381
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaattta 198  Q
    ||||||||||  |||||||||||||||||||||||||| ||| |||| ||||||| ||||||||| ||||    
T  22339312 aaataagtaaggcgaattgtttggacgaaacgacaatccttgcggatgcgatactttacttatcacttta 22339381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 15869659 - 15869595
Alignment:
Q  163 aatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||| ||| |||||||||||||||||||||| |||||  |||||||||||||||| |||||||||    
T  15869659 aatccttgcggatacgatactctacttatcactttattacttggtaaacgatttgatacacttgc 15869595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 18661654 - 18661590
Alignment:
Q  163 aatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||| |||||||||| ||||||||||||||| |||||   |||||||||||||||||||||||||    
T  18661654 aatccttgtggatacaatactctacttatcactttattgtttggtaaacgatttggtacacttgc 18661590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 19153493 - 19153434
Alignment:
Q  29 ttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||||||||| ||||||||| ||||||| |||| |||||||||||||||||||||||||||    
T  19153493 ttacttttctgcaaccaaaaacaggtaa-cttgttatgttgcaaacagataaaaattgcaa 19153434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 20752892 - 20752833
Alignment:
Q  29 ttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||||||||| ||||||||| ||||||| |||| |||||||||||||||||||||||||||    
T  20752892 ttacttttctgcaaccaaaaacaggtaa-cttgttatgttgcaaacagataaaaattgcaa 20752833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 130 - 226
Target Start/End: Original strand, 26134750 - 26134845
Alignment:
Q  130 aataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||||||  ||||||| | |  |||| |||| ||| |||||||||||||||||||||| || |||||  |||||||||||||||||||||||||    
T  26134750 aataagtaacgtgaattgtctagttgaaatgacagtctatgtggatacgatactctactta-cattttattacttggtaaacgatttggtacacttg 26134845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 6013692 - 6013593
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||  | |||||||||||  ||| || |||| |||||||||||||||||||||||||| || |   |||| |||| ||||||||||||||||    
T  6013692 aaaataagtaaagccaattgtttggataaaatgagaatccttgtggatacgatactctacttatcacttaagtacttgataaatgatttggtacacttgc 6013593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 18662664 - 18662579
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||| |||||||| |||||| | |||||||| ||||| |||||||||| |||||| |||||| ||||||||||| |||||||||||||    
T  18662664 ggggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaac-aggtaa-cttgctctgttgcaaacaaataaaaattgcaa 18662579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 5797609 - 5797511
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||||| ||||||||||  ||   ||||||   ||||||||||||||||||||||| | |||||  |||||||| ||||||| |||||||||    
T  5797609 aaataagtaacacaaattgtttggttgatttgacaattcatgtggatacgatactctacttattactttattacttggtaagcgatttgttacacttgc 5797511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 18449340 - 18449242
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||| | ||||||||||  ||||||||||||  | ||||||||||| | ||||| ||| |||||  |||||||||| ||||| |||||||||    
T  18449340 aaataagtaacgccaattgtttggctgaaacgacaatccctatggatacgatattatacttctcactttattacttggtaaacaatttgatacacttgc 18449242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 18467549 - 18467479
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||||||||||||  |||||||| |||||||||||||||  ||||||||| ||||| ||||||||| |||||    
T  18467549 aaataagtaacataaattgtttagacgaaacgacaatccatgtggatacaatactttacttatcactttat 18467479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 18495471 - 18495374
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||||||||| |||||||| |||||||||||||||    |||||||  |||| ||||||||| |||||  ||| |||||| |||| |||||||||    
T  18495471 aaataagtaacacaaattgtttagacgaaacgacaatccccatggatacattactttacttatcactttattacttagtaaacaatttagtacacttg 18495374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 31493148 - 31493066
Alignment:
Q  4 gggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgca 88  Q
    |||||||||||||||||| |  ||||||| |||||||||||||||| ||   ||||  || ||||||||||||||||||||||||    
T  31493148 gggttcgaagaatcctaaccgttgcttacatttctacaaccaaaacaag--taactgactctgttgcaaacagataaaaattgca 31493066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 6005934 - 6005839
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    |||||||||||  ||||||||||||| |||||||||||  ||||||||| |||||||  ||| ||||||||   ||||||||| |||||||| ||||    
T  6005934 aaataagtaacgtgaattgtttggaccaaacgacaatccatgtggatacaatactctggtta-caatttattaattggtaaacaatttggtaaactt 6005839  T

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Target: chr7; HSP #74
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 17829793 - 17829712
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaatt 85  Q
    |||| ||||||||||| ||| ||||||||| |||||| ||||||||||   || |||||| | |||||||||||||||||||||    
T  17829793 ggggattcgaagaatcttaaccactgcttaattttctccaaccaaaac--agttaacttgttctgttgcaaacagataaaaatt 17829712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 9131135 - 9131049
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||| ||||||||||||||| | | |||||||||| | ||||||||| || || |||||||| | ||||||||| |||||||||||||    
T  9131135 ggggattcgaagaatcctaaccgcagcttacttttttgcaaccaaaaaca-gttaacttgctctattgcaaacaaataaaaattgcaa 9131049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 9261302 - 9261211
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggta 220  Q
    ||||||| ||||| ||||||||  |||||| |||||||  | ||||||||||||||| ||||||| ||| |  |||||||||||||| ||||    
T  9261302 aaataagcaacacaaattgtttaaacgaaatgacaatccatatggatacgatactctgcttatcatttttttacttggtaaacgattaggta 9261211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 129 - 220
Target Start/End: Complemental strand, 18466103 - 18466012
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggta 220  Q
    ||||||||||||| ||||||||||  ||||||| ||||  | |||||||| |||||||||||||| |||||   ||| |||| |||||||||    
T  18466103 aaataagtaacacaaattgtttggctgaaacgagaatccctatggatacgttactctacttatcactttattatttgataaatgatttggta 18466012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 166
Target Start/End: Original strand, 3191059 - 3191097
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatc 166  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  3191059 aaaataaataacacgaattgtttggacgaaacgacaatc 3191097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 5047388 - 5047485
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||| ||||| | || |||||  |||||||||||||| || | ||||||| |||||||| || |||||  ||||||||| ||||||||||||||||    
T  5047388 aaataagcaacacaatttttttggttgaaacgacaatcttcgtaggtacgataatctactta-cactttattacttggtaaatgatttggtacacttgc 5047485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 8293925 - 8293997
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaatt 85  Q
    ||||||||||| ||||||  || ||||| |||||||||| |||||| |||||| |||||||||||||||||||||    
T  8293925 aagaatcctaaccactgcgaacatttctgcaaccaaaac-aggtaa-cttgctctgttgcaaacagataaaaatt 8293997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 7397266 - 7397198
Alignment:
Q  156 aaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    |||||||||||  |||||||||||||||||| ||| || |||||  ||||||||||| ||||||||||||    
T  7397266 aaacgacaatccatgtggatacgatactctagtta-cactttattacttggtaaacggtttggtacactt 7397198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 16306792 - 16306695
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||||||  | |||||||| || |||| || |||| |||| ||||||||||||||||||||| |||||  |||| |||| |||||  ||||||||    
T  16306792 aaataagtaatgcaaattgtttagatgaaatgataatccttgtagatacgatactctacttatcactttattacttgttaaaggattttatacacttg 16306695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 10586897 - 10586984
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||| ||| |||| || ||| |||||||||||||| | |||||| || || |||  |||||| |||||||||||||||||||||||||    
T  10586897 aggggattcaaagagtcttaaccactgcttacttttttgcaaccagaaacatgtat-cttgctctgttgcaaacagataaaaattgcaa 10586984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 13289385 - 13289469
Alignment:
Q  106 cttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
    |||||||| |||||||||||||||||||| |||   |||||||| ||| |||| |||||||  ||||||||| ||| | ||||||    
T  13289385 cttttataccgtcaaacttacaaaaataattaattagaattgttcggaggaaaggacaatccatgtggatacaatattatactta 13289469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 190
Target Start/End: Original strand, 22067199 - 22067287
Alignment:
Q  103 taacttttatatcgtcaaactta-caaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
    ||||||||||||||| ||||||| |||||| || ||||  |||||| | |||||||| |||||||  | |||||| |||||||||||||    
T  22067199 taacttttatatcgttaaacttaccaaaaaaaactaactagaattgatcggacgaaaggacaatccctatggatatgatactctactta 22067287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 17151799 - 17151849
Alignment:
Q  176 acgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||||||||||||||| | |||||| | ||||||||||||||||    
T  17151799 acgatactctacttatcaatttat-ttttggtatatgatttggtacacttgc 17151849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 9866570 - 9866639
Alignment:
Q  157 aacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||  ||||||||| ||||||||||||| || |||||   ||||||||| |||||||||||||||    
T  9866570 aacgacaattattgtggatatgatactctactta-cactttattatttggtaaacaatttggtacacttgc 9866639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 12391283 - 12391185
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||||||||  || ||  |||||||||||   |||| |||||| ||||| ||||||| |||||   ||| ||||| |||||||||||||||    
T  12391283 aaataagtaacacgaatcattcggttgaaacgacaattcctgtgaatacgacactcttcttatcactttattatttgataaactatttggtacacttgc 12391185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 21102320 - 21102374
Alignment:
Q  155 gaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaa 209  Q
    |||||||||||| ||||| |||| ||||||||||||||| |||||  ||||||||    
T  21102320 gaaacgacaatcattgtgaatacaatactctacttatcactttattacttggtaa 21102374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 89
Target Start/End: Complemental strand, 10648750 - 10648717
Alignment:
Q  56 aacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||||||| |||||||||||||||||||||||||    
T  10648750 aacttgctttgttgcaaacagataaaaattgcaa 10648717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 14195899 - 14195932
Alignment:
Q  56 aacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||||||| |||||||||||||||||||||||||    
T  14195899 aacttgctctgttgcaaacagataaaaattgcaa 14195932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 190
Target Start/End: Original strand, 17191178 - 17191263
Alignment:
Q  105 acttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
    ||||||||| | ||||||||| ||||||| |||||  |||| ||| ||| |||| ||||| |  | ||||||||||||||||||||    
T  17191178 acttttataccatcaaacttaaaaaaatacgtaacgagaatcgttcggatgaaaggacaacccctatggatacgatactctactta 17191263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 222
Target Start/End: Complemental strand, 21227233 - 21227184
Alignment:
Q  173 gatacgatactctacttatcaatttatatcttggtaaacgatttggtaca 222  Q
    ||||||||||||||||||||| |||||  ||| ||||| |||||||||||    
T  21227233 gatacgatactctacttatcactttattactttgtaaatgatttggtaca 21227184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 23093381 - 23093310
Alignment:
Q  155 gaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||||   || ||||| |||||||||||| || |||||  ||| ||||||||||||||||||||||    
T  23093381 gaaacgacaatccacgtagatacaatactctactta-cactttattacttagtaaacgatttggtacacttgc 23093310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 7e-63; HSPs: 69)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 2 - 212
Target Start/End: Original strand, 23231859 - 23232067
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| |||||||||||||||||  |||||||||||||| ||||||||| || |||| ||||| |||||||||||||||||| |||||||||||||||||     
T  23231859 ggggattcgaagaatcctaaacgttgcttacttttctataaccaaaacaag-taaatttgctctgttgcaaacagataaaa-ttgcaagacttctaaccg 23231956  T
Q  102 ttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatat 201  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||  || |||||| ||||| |||||||||| |||||      
T  23231957 ttaacttttatatcgtcaaacttacaaaaataagtaacgcgaattgtttggacgaaccgacaattcttatggatatgataccctacttatcactttatta 23232056  T
Q  202 cttggtaaacg 212  Q
    |||||||||||    
T  23232057 cttggtaaacg 23232067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 5624860 - 5624640
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac 106  Q
    ||||||||||||||| | |||||||||||||| ||||||||| | |||||||| ||| | || ||||||||||||||||||||   ||||||||||||||    
T  5624860 ttcgaagaatcctaaccgctgcttacttttctgcaaccaaaagccggtaaact-gctctattacaaacagataaaaattgcaacctttctaacccttaac 5624762  T
Q  107 ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatct-ttgtggatacgatactctacttatcaatttatatcttg 205  Q
    |||| |||||||||||||||||||||||||||| | ||||||||| || |||||||||||| |  || ||| |||||||||||||||| |||||  ||||    
T  5624761 ttttctatcgtcaaacttacaaaaataagtaacgcaaattgtttgcacaaaacgacaatctctattgtataagatactctacttatcactttattacttg 5624662  T
Q  206 gtaaacgatttggtacacttgc 227  Q
    ||||||||||||||||| ||||    
T  5624661 gtaaacgatttggtacatttgc 5624640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 7 - 225
Target Start/End: Original strand, 23844344 - 23844562
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccctt--a 104  Q
    |||||| |||||||| | |||||||||||| | |||||||||| ||||||||||| | | ||||||||||||||||||||||| | |||||||||||  |    
T  23844344 ttcgaaaaatcctaaccgctgcttacttttatgcaaccaaaac-aggtaaacttggtctattgcaaacagataaaaattgcaacatttctaaccctttta 23844442  T
Q  105 acttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatctt 204  Q
     ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||  | | |||| |||||||||||||||| |||||  |||    
T  23844443 tcttttatatcgtcaa-cttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccctttagatatgatactctacttatcattttattactt 23844541  T
Q  205 ggtaaacgatttggtacactt 225  Q
    |||||||||||||||||||||    
T  23844542 ggtaaacgatttggtacactt 23844562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 7 - 227
Target Start/End: Original strand, 27737568 - 27737788
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac 106  Q
    ||||||||||||||| | |||||||||||| | |||| ||||| ||||||||||||| |||||||||||||||||||||||||  || |||||||||| |    
T  27737568 ttcgaagaatcctaaccgctgcttacttttttgcaacaaaaac-aggtaaacttgctctgttgcaaacagataaaaattgcaactct-ctaacccttatc 27737665  T
Q  107 ttttat---atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatct 203  Q
    ||| ||   |||||||| |||||||||||||||||| ||||||||||||||||||| |||||| |||||| || |||||||||||||||| |||||  ||    
T  27737666 tttcattttatcgtcaa-cttacaaaaataagtaacgcgaattgtttggacgaaacaacaatccttgtgggtatgatactctacttatcactttattact 27737764  T
Q  204 tggtaaacgatttggtacacttgc 227  Q
    ||||||||||||| ||||||||||    
T  27737765 tggtaaacgatttagtacacttgc 27737788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 25 - 226
Target Start/End: Complemental strand, 9516987 - 9516786
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccctt--aacttttatatcgtcaaac 122  Q
    ||||||| |||||| ||| |||||  |||||||||||||||||||| ||||||||||| || |||   |||||||||||  | ||||||||||||||| |    
T  9516987 ctgcttaattttctgcaatcaaaat-aggtaaacttgctatgttgctaacagataaaacttacaacctttctaacccttttatcttttatatcgtcaa-c 9516890  T
Q  123 ttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtaca 222  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||||| |||||  || ||||||||||||||||||    
T  9516889 ttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattactaggtaaacgatttggtaca 9516790  T
Q  223 cttg 226  Q
    ||||    
T  9516789 cttg 9516786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 26 - 227
Target Start/End: Original strand, 17826994 - 17827191
Alignment:
Q  26 tgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttatatcgtcaaactta 125  Q
    ||||||||||||| ||||||||| || ||||||| ||||||||||||||| |||||||||||||  ||| ||||||||| ||||||||| ||||||   |    
T  17826994 tgcttacttttctgcaaccaaaaacaagtaaact-gctatgttgcaaacatataaaaattgcaactcttttaacccttatcttttatattgtcaaa---a 17827089  T
Q  126 caaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
     ||||||||||||| ||||||||||||| ||||||||||||  |||||||||||||||||| |||| | |||||  |||  ||||||| |||||||||||    
T  17827090 aaaaaataagtaacgcgaattgtttggaagaaacgacaatccatgtggatacgatactctatttataactttattacttattaaacgagttggtacactt 17827189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 27124368 - 27124589
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||| ||||||| ||| | |||||||||||||| ||||||| || ||||||||||||| ||||||||||| |||||||||| ||| ||| |||||    
T  27124368 aggggattcaaagaatcttaaccgctgcttacttttctgcaaccaagac-aggtaaacttgctctgttgcaaacatataaaaattggaagtcttttaacc 27124466  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttata 200  Q
    ||||  ||||||||||||||  |  ||||||||||||||  ||||||||||  |||||||||||||  ||| ||||||||| | || |||||| |||||     
T  27124467 cttatgttttatatcgtcaagtt--caaaaataagtaacgagaattgtttgctcgaaacgacaatccatgtcgatacgataatataattatcactttatt 27124564  T
Q  201 tcttggtaaacgatttggtacactt 225  Q
     ||||||||||||||||||||||||    
T  27124565 acttggtaaacgatttggtacactt 27124589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 34 - 211
Target Start/End: Original strand, 22410234 - 22410410
Alignment:
Q  34 tttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttat---atcgtcaaacttacaaaa 130  Q
    ||||| |||||||||  ||| ||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||   |||||||| ||||  |||    
T  22410234 tttctgcaaccaaaaataggaaaacttgctctgttgcaaacagataaaaattgcaaga-ttctaacccttatcttttattatatcgtcaa-ctta--aaa 22410329  T
Q  131 ataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaac 211  Q
    |||||||||  |||||||||| | ||||||||||||  ||||||||||||||||||||||||| |||||  ||||||||||    
T  22410330 ataagtaacgtgaattgtttgaatgaaacgacaatccctgtggatacgatactctacttatcattttattacttggtaaac 22410410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 9726120 - 9726022
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||| | ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  9726120 aaataagtaacgcaaattgtttggacgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgc 9726022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 2 - 230
Target Start/End: Original strand, 12183205 - 12183433
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||||||||||||||| |  |||||||||||||  ||||||||| |||||| |||||||||||||||||||||||| |||||||    |||||||     
T  12183205 ggggattcgaagaatcctaaccgttgcttacttttctgtaaccaaaac-aggtaa-cttgctatgttgcaaacagataaacattgcaatc--tctaacct 12183300  T
Q  102 ttaac--------ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatca 193  Q
    ||||         |||||||||||||  ||||   |||||||||||  |||||||| |||||||| |||||||  ||||||||||||||| |||||||||    
T  12183301 ttaaactcttttattttatatcgtcac-ctta---aaataagtaacgtgaattgttaggacgaaatgacaatccatgtggatacgatactgtacttatca 12183396  T
Q  194 atttatatcttggtaaacgatttggtacacttgcata 230  Q
     |||||  |||||||||||||||||||||||||||||    
T  12183397 ctttattacttggtaaacgatttggtacacttgcata 12183433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 17729244 - 17729154
Alignment:
Q  135 gtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  17729244 gtaacgcgaatcgtttggacgaaacgacaatctttgtggatacgatactctacttatcactttattacttggtaaacgatttggtacactt 17729154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 7 - 188
Target Start/End: Complemental strand, 24475275 - 24475095
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc-ttaa 105  Q
    ||||||||||||||| |||| ||||||||||| ||||||||| |||||||||||| | ||||||||||||||||| |||||||   ||||||||| |||     
T  24475275 ttcgaagaatcctaaccactacttacttttctgcaaccaaaa-caggtaaacttgttttgttgcaaacagataaagattgcaacctttctaaccctttat 24475177  T
Q  106 cttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctact 188  Q
    ||||| ||||||| |||||||||||||||||  | ||  ||||||||||||||  |||||  |||||||| ||||||| ||||    
T  24475176 cttttttatcgtc-aacttacaaaaataagtttcgcgtgttgtttggacgaaataacaattcttgtggatgcgatactatact 24475095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 14637093 - 14636929
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaat-tgcaagacttctaacc 100  Q
    |||| ||||||||||||||  | |||||||||||||| ||||||||| |||||||||||||| ||||| ||  |||||||||  ||||    ||||||||    
T  14637093 ggggattcgaagaatcctattcgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgttgtaataagataaaaaaatgcatct-ttctaacc 14636995  T
Q  101 cttaac-ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaat 165  Q
    |||||  ||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||    
T  14636994 cttaaaattttatatcgtcaaacttataaaaataagtaacacgaattgtttagacggaacgacaat 14636929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 55 - 227
Target Start/End: Complemental strand, 23143894 - 23143722
Alignment:
Q  55 aaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaactt---ttatatcgtcaaacttacaaaaataagtaacacgaattgtttg 151  Q
    ||||||| | ||||| |||||||||||||||| ||  | ||||||| ||| |||   |||||||||| ||||||| ||||||||||||| ||||||||||    
T  23143894 aaacttgatctgttgtaaacagataaaaattgaaactc-tctaacctttatcttttattatatcgtc-aacttac-aaaataagtaacatgaattgtttg 23143798  T
Q  152 gacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||||||  |||||||| |||||||||||||||| |||||   |||||||| ||||||||||||||||    
T  23143797 gacgaaacgacaatccctgtggatatgatactctacttatcactttattaattggtaaatgatttggtacacttgc 23143722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 25782003 - 25781796
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| |||||||||||||||  |||| |||||||||| |||||||||  ||||||||||||| |||||||||||||||||||||||||               
T  25782003 aggggattcgaagaatcctaactactgtttacttttctgcaaccaaaat-aggtaaacttgctctgttgcaaacagataaaaattgcaa----------- 25781916  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttata 200  Q
    | ||||||||||| | || ||||||||||||||||||||  ||||||||||||||||||||||||     |  |||||||| |||| |||||| |||||     
T  25781915 cctaacttttataccatc-aacttacaaaaataagtaacgtgaattgtttggacgaaacgacaat-----tccatacgatattctatttatcattttatt 25781822  T
Q  201 tcttggtaaacgatttggtacacttg 226  Q
     ||  |||||||||||||||||||||    
T  25781821 actcagtaaacgatttggtacacttg 25781796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 24657342 - 24657526
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| |||||||||| |||| | |||||||||||||| |||||||||| ||||||| | ||| ||||||||||||||||||||| |||               
T  24657342 aggggattcgaagaattctaaccgctgcttacttttctgcaaccaaaac-aggtaaattcgctctgttgcaaacagataaaaatttcaa----------- 24657429  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||||   |||||| |||||||||||||||||||||||||| |||||||| ||||||||  ||||||  |||||||||||||||| |||||||| |||||    
T  24657430 cttac--tttataccgtcaaacttacaaaaataagtaacaagaattgttcggacgaaaaaacaatccctgtggatacgatactcgacttatcattttat 24657526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 25 - 227
Target Start/End: Complemental strand, 8241475 - 8241277
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac-------ttttatatcgt 117  Q
    |||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||  |  |||||| ||||||       |||||||||||    
T  8241475 ctgcttacttttctacaaccaaa--caggtaa-cttgctatgttgcaaacagataaaaattgca--atctctaactcttaactcttttattttatatcgt 8241381  T
Q  118 caaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttg 217  Q
     |||||    |||||||||||   ||||||||||||| ||||| ||| | |||||||||||||||||||||||||| ||| |  ||| ||||||||||||    
T  8241380 gaaact----aaaataagtaatgtgaattgtttggacaaaacg-caa-ccttgtggatacgatactctacttatcactttcttacttcgtaaacgatttg 8241287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 21672434 - 21672534
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||| |||||||||||||||||||||||||| || ||||  ||||||||||||||||||||||||| |||||  |||||||||||||||||| ||||||    
T  21672434 aaaaaaaagtaacacgaattgtttggacgaaaagataatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtgcacttg 21672533  T
Q  227 c 227  Q
    |    
T  21672534 c 21672534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 11136123 - 11135943
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttcta-caaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaac 99  Q
    ||||| ||||||||||||||| | || ||||||||| |  ||||||||| |||||||  | ||| |||||||||||||||||||||||||              
T  11136123 aggggattcgaagaatcctaaccgcttcttactttttttgcaaccaaaaacaggtaagttcgctctgttgcaaacagataaaaattgcaa---------- 11136034  T
Q  100 ccttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttat 191  Q
     | ||||||||||| |||||||||||||||||||| |||||  |||| ||  ||||||| |||||||| |||||||||||||||||||||||    
T  11136033 -cctaacttttataccgtcaaacttacaaaaataattaacaataattattcagacgaaaggacaatctctgtggatacgatactctacttat 11135943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 21679850 - 21679950
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||| |||||||||||||||||||||||||| || ||||  ||||||||||||||||||||||||| |||||  ||| |||||||||||||| ||||||    
T  21679850 aaaaaaaagtaacacgaattgtttggacgaaaagataatccatgtggatacgatactctacttatcactttattacttagtaaacgatttggtgcacttg 21679949  T
Q  227 c 227  Q
    |    
T  21679950 c 21679950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 21907527 - 21907432
Alignment:
Q  132 taagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||| ||| || ||||||||||||||||||| |||||||||||||||| ||||||||| |||||  ||||||||||||||||||| ||||||    
T  21907527 taagtaacgcgacttttttggacgaaacgacaatccttgtggatacgatactttacttatcactttattacttggtaaacgatttggtatacttgc 21907432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 23009281 - 23009464
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| |||||||| |||||| | ||| |||||  ||| |||||||||| ||||||| ||||| ||||||||||| ||||||| |||||               
T  23009281 aggggattcgaagagtcctaatcgctgtttactcgtcttcaaccaaaac-aggtaaatttgctctgttgcaaacaaataaaaactgcaa----------- 23009368  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaattta 198  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||| |||||| |||| |||||||  |||||||||||| |||||||||||| ||||    
T  23009369 ctta-cttttatatcgtcaaacttacaaaaataagtaacaagaatt-tttggaagaaaggacaatccctgtggatacgatgctctacttatcacttta 23009464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 23779083 - 23778900
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| |||||||| |||||| | ||| |||||  ||| |||||||||| ||||||| ||||| ||||||||||| ||||||| |||||               
T  23779083 aggggattcgaagagtcctaatcgctgtttactcgtcttcaaccaaaac-aggtaaatttgctctgttgcaaacaaataaaaactgcaa----------- 23778996  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaattta 198  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||| |||||| |||| |||||||  |||||||||||| |||||||||||| ||||    
T  23778995 ctta-cttttatatcgtcaaacttacaaaaataagtaacaagaatt-tttggaagaaaggacaatccctgtggatacgatgctctacttatcacttta 23778900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 20005791 - 20005900
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||||||| ||| | |||| ||| ||||| ||||||||| |||||||||| ||| ||||||||||| ||||||||||||||  ||||||||    
T  20005791 aggggattcgaagaatcttaaccgctgcatacctttctgcaaccaaaaacaggtaaactcgctctgttgcaaacaaataaaaattgcaagctttctaacc 20005890  T
Q  101 cttaactttt 110  Q
    ||||||||||    
T  20005891 cttaactttt 20005900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 21841573 - 21841752
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||||||||||| |||| |||  |||  | |||||||||| || |||||||||| |||||||| ||||||||||||||||               
T  21841573 aggggattcgaagaatcctaaccactacttcatttcttgcaaccaaaacaag-taaacttgctttgttgcaatcagataaaaattgcaa----------- 21841660  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatc 192  Q
    | ||||||||||| |||||||||||||||||||||||||| ||| |||| |||||||| |||||||  ||||||| | | ||||||||||||    
T  21841661 cctaacttttataccgtcaaacttacaaaaataagtaacaagaaatgttcggacgaaaggacaatccatgtggattcaaaactctacttatc 21841752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 23645765 - 23645861
Alignment:
Q  126 caaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtaca 222  Q
    ||||||||| ||||   ||||||||||||||||||||||||  | ||||||||||||||||||||||| |||||  |||||||||||||||||||||    
T  23645765 caaaaataattaacgataattgtttggacgaaacgacaatccctatggatacgatactctacttatcactttattacttggtaaacgatttggtaca 23645861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 107 - 226
Target Start/End: Complemental strand, 4339851 - 4339736
Alignment:
Q  107 ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttgg 206  Q
    |||||||||||||||||    |||||||||||  ||||||| |||||| ||||||||||| |||||||||| ||||||||||||||| |||||   |||     
T  4339851 ttttatatcgtcaaact----aaaataagtaatgcgaattggttggacaaaacgacaatcattgtggatacaatactctacttatcactttattatttga 4339756  T
Q  207 taaacgatttggtacacttg 226  Q
    ||||| ||||||||||||||    
T  4339755 taaacaatttggtacacttg 4339736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 105 - 191
Target Start/End: Original strand, 22413026 - 22413112
Alignment:
Q  105 acttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttat 191  Q
    ||||||||| |||||||||||||||||||||||||| |||||||| ||||||||  ||||||  ||| |||||||||||||||||||    
T  22413026 acttttataccgtcaaacttacaaaaataagtaacaagaattgttcggacgaaagaacaatccatgtagatacgatactctacttat 22413112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 25927305 - 25927402
Alignment:
Q  130 aataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||  |||||||||||||||||| | ||||  ||||||||||||| ||||||||||| |||||  ||||||||||| ||||||||||||||    
T  25927305 aataagtaacgtgaattgtttggacgaaactaaaatccatgtggatacgatattctacttatcactttattacttggtaaacgttttggtacacttgc 25927402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 28933660 - 28933757
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    |||||||| ||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||   ||| ||||| || ||||||||||    
T  28933660 aaaataagcaacacaaattgtttggacgaaacgataatccttgtggatacgatactctacttatcactttattatttgctaaacaatatggtacactt 28933757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 56 - 227
Target Start/End: Complemental strand, 11177122 - 11176950
Alignment:
Q  56 aacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact-------tttatatcgtcaaacttacaaaaataagtaacacgaattgt 148  Q
    |||||||||||||||||||  |||||||||||||   |||||||||||| ||       |||||||||||||  |    ||||||||||||||||||| |    
T  11177122 aacttgctatgttgcaaacttataaaaattgcaat--ttctaacccttatctcttttattttatatcgtcaattt----aaaataagtaacacgaattat 11177029  T
Q  149 ttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    || || |||||||||| |  ||||||||||||||||||||||||| ||||   || ||||||||||| |||||||||||    
T  11177028 ttcgaagaaacgacaacccatgtggatacgatactctacttatcactttagtactcggtaaacgattgggtacacttgc 11176950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 227
Target Start/End: Original strand, 14079337 - 14079543
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac 106  Q
    |||||||||| |||| | ||||||||||||||  ||||||||  ||| |||||| || |||||||||||||||||||||||||  || ||| ||||||      
T  14079337 ttcgaagaattctaaccgctgcttacttttctgtaaccaaaaataggaaaacttcctttgttgcaaacagataaaaattgcaactct-ctagcccttata 14079435  T
Q  107 tttta---tatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatct 203  Q
    |||||   ||||||||| ||||  |||||||||||| || ||| |||||||||            | ||| ||||||||||||||||||| |||||| ||    
T  14079436 ttttagcatatcgtcaa-ctta--aaaataagtaacgcggattttttggacga------------tttgg-tacgatactctacttatcactttataact 14079519  T
Q  204 tggtaaacgatttggtacacttgc 227  Q
    ||||||||||||||||||||||||    
T  14079520 tggtaaacgatttggtacacttgc 14079543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 20005899 - 20005977
Alignment:
Q  148 tttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||||||||| ||||  ||| ||||||||||||| ||||||| |||||  |||||||||||||||||||||||||    
T  20005899 tttggacgaaacgaaaatccatgtagatacgatactctgcttatcactttattacttggtaaacgatttggtacacttg 20005977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 17299832 - 17299925
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtaca 222  Q
    ||||||||||| | |||||||||||| |||||||||||    || |||||||||||||||||||| |||||  |||||||||||||||| ||||    
T  17299832 aaataagtaacgcaaattgtttggactaaacgacaatcccgatgaatacgatactctacttatcactttattacttggtaaacgatttgctaca 17299925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 22566163 - 22566256
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtaca 222  Q
    ||||||||||| ||||||| || |||||| |||||||  ||||||||| |||||||||||||||| |||||  |||||||||  ||||||||||    
T  22566163 aaataagtaacgcgaattgcttagacgaagcgacaattcttgtggatatgatactctacttatcactttattacttggtaaataatttggtaca 22566256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 24252227 - 24252287
Alignment:
Q  126 caaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactcta 186  Q
    ||||||||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||    
T  24252227 caaaaataagtaacaagaattgtttggactaaacgacaatccatgtggatacgatactcta 24252287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 9838572 - 9838384
Alignment:
Q  10 gaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac--- 106  Q
    |||||||||||| || ||||||||||||| ||||||||||  ||  |||||||| | ||||||||||||||||||| ||  |  |||||| ||| ||       
T  9838572 gaagaatcctaaccattgcttacttttctgcaaccaaaac--gggtaacttgctcttttgcaaacagataaaaattaca--atctctaacgcttcactct 9838477  T
Q  107 ----ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
        |||||||||||||||||    |||||||||||| ||| ||||||  || ||| |||||||  ||||||||| ||||||||||||||| |||||    
T  9838476 tttattttatatcgtcaaact----aaaataagtaacgcgagttgtttcaacaaaatgacaatccatgtggatacaatactctacttatcactttat 9838384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 15466468 - 15466370
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||| |||| |||||||||| ||||||| |||||||  | | ||||||||||||||| || || |||||  ||||||||||||||||||||||||||    
T  15466468 aaaataactaacgcgaattgtttagacgaaatgacaatccctattgatacgatactctacgta-cactttattacttggtaaacgatttggtacacttgc 15466370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 123 - 222
Target Start/End: Original strand, 17883780 - 17883878
Alignment:
Q  123 ttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtaca 222  Q
    |||||||| ||||||||||||||||||||||||||| |||||||  ||| ||| |||| ||||||| | ||  ||||  |||||||||||||||||||||    
T  17883780 ttacaaaagtaagtaacacgaattgtttggacgaaaggacaatccctgtcgatgcgatcctctactca-cacgttattacttggtaaacgatttggtaca 17883878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 22567939 - 22567840
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||||  || ||||||||||||||| ||||||  ||||||||| ||||| ||||| |||  ||||  |||||||||| |||||||||||||||    
T  22567939 aaaataagtaacgtgagttgtttggacgaaaccacaatccatgtggatacaatactatacttttcacgttattacttggtaaacaatttggtacacttgc 22567840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 19244667 - 19244585
Alignment:
Q  145 ttgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||||||||||||||| | | ||| ||||||||||||||||| |||||  ||||||||||||| | ||| ||||||    
T  19244667 ttgtttggacgaaacgacaatctctatagattcgatactctacttatcactttattacttggtaaacgatctagtaaacttgc 19244585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 8039139 - 8039230
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||||||||||||||||| ||||||||||||       ||||||||||| ||||| || |||||  ||||||||||||||||| ||||||||    
T  8039139 aaaataagtaacacgaattgtttggatgaaacgacaatc-------atacgatactccactta-cactttattacttggtaaacgatttggcacacttgc 8039230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 18075404 - 18075485
Alignment:
Q  144 attgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    ||||||||||| |||||||||||   |||||||||||||||| ||||||| |||||  |||||||||| |||| ||||||||    
T  18075404 attgtttggacaaaacgacaatccacgtggatacgatactctgcttatcactttattacttggtaaacaatttcgtacactt 18075485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 20144995 - 20145108
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttct-aac 99  Q
    ||||| ||||||||||||| | | |||||| ||||||| |||| ||||  | |||||||| || ||||||||||| ||||||||||||||  |||| |||    
T  20144995 aggggattcgaagaatccttaccgctgcttgcttttctgcaactaaaaatacgtaaactttctctgttgcaaacatataaaaattgcaagctttctaaac 20145094  T
Q  100 ccttaacttttata 113  Q
    |||||| |||||||    
T  20145095 ccttaatttttata 20145108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 21688795 - 21688892
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    |||||||||||| |||||| |||||| | ||||||||||  | ||||||| ||||||||||||||| || ||  ||| |||||||||| |||||||||    
T  21688795 aaaataagtaacgcgaattttttggatgtaacgacaatccctatggatacaatactctacttatcacttgattacttagtaaacgattgggtacactt 21688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 22187844 - 22187731
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttct-aac 99  Q
    ||||| ||||||||||||| | | |||||| ||||||| |||| ||||  | |||||||| || ||||||||||| ||||||||||||||  |||| |||    
T  22187844 aggggattcgaagaatccttaccgctgcttgcttttctgcaactaaaaatacgtaaactttctctgttgcaaacatataaaaattgcaagctttctaaac 22187745  T
Q  100 ccttaacttttata 113  Q
    |||||| |||||||    
T  22187744 ccttaatttttata 22187731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 28586031 - 28586128
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||||||  | ||||||| |  ||||||||||||  ||| |||| ||||||||||||||||||||||  || |||||||||||||||| |||||    
T  28586031 aaataagtaacgtggattgttttgttgaaacgacaatccatgtcgatatgatactctacttatcaatttattactcggtaaacgatttggtatacttg 28586128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 28 - 166
Target Start/End: Original strand, 22813621 - 22813747
Alignment:
Q  28 cttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttatatcgtcaaacttaca 127  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||||| ||||||||||||            | |||||||||||  |||||||  |||    
T  22813621 cttacttttctgcaaccaaaac-aggtaaacttgctttgttgcaaacaaataaaaattgcat-----------cctaacttttatactgtcaaaccgaca 22813708  T
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatc 166  Q
    ||||||||||||| |||||||| ||| |||| |||||||    
T  22813709 aaaataagtaacaagaattgttcggatgaaaggacaatc 22813747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 2586806 - 2586721
Alignment:
Q  141 cgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||| ||||||||||||||||||| || ||||| | ||||| ||||||||| || ||  |||||||||| |||||||||||||||    
T  2586806 cgaattttttggacgaaacgacaatcattttggatgc-atactatacttatcacttcattacttggtaaacaatttggtacacttgc 2586721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Complemental strand, 1635181 - 1635110
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataa 80  Q
    ||||||||||||||| | ||| |||||||||||||||||||| || || |||||||| ||||||||||||||||    
T  1635181 ttcgaagaatcctaaccgctgtttacttttctacaaccaaaa-catgt-aacttgctttgttgcaaacagataa 1635110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 17382270 - 17382214
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaa 82  Q
    |||||||||||||| |||||||||| | ||||||||||| ||||||||||||||||||    
T  17382270 ctgcttacttttctgcaaccaaaac-atgtaaacttgctctgttgcaaacagataaaa 17382214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 10 - 73
Target Start/End: Original strand, 17883724 - 17883786
Alignment:
Q  10 gaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaa 73  Q
    |||||||| ||||| |||||||||||||| ||||||||| |||||||| |||||||||| ||||    
T  17883724 gaagaatcataaacgctgcttacttttctccaaccaaaaacaggtaaa-ttgctatgttacaaa 17883786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 176 - 227
Target Start/End: Original strand, 21932100 - 21932151
Alignment:
Q  176 acgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||||||||| |||||  |||||||||| |||||||||||||||    
T  21932100 acgatactctacttatcactttattacttggtaaacaatttggtacacttgc 21932151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 22566048 - 22566122
Alignment:
Q  14 aatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||||||| | |||||||||||||||||| |||||  |||||| ||||   |||||||||||||||||||||||||    
T  22566048 aatcctaaccgctgcttacttttctacaatcaaaaataggtaa-cttgtagtgttgcaaacagataaaaattgcaa 22566122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 132 - 227
Target Start/End: Complemental strand, 24251611 - 24251516
Alignment:
Q  132 taagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||| |||||||||||||| | ||||||| |  ||||||| |||| |||| ||||| | |||||  |||||||||||| ||| |||||||||    
T  24251611 taagtaacgcgaattgtttggacaagacgacaaaccctgtggatgcgatcctctgcttatgactttattacttggtaaacgaattgatacacttgc 24251516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 23645651 - 23645727
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||| ||||| |||||||||||||| | |||||||||| | |||| |||||| ||||||||||| |||||||||||||    
T  23645651 aagaagcctaaccactgcttacttttatgcaaccaaaac-atgtaa-cttgctctgttgcaaacaaataaaaattgcaa 23645727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 7542962 - 7543059
Alignment:
Q  130 aataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||| ||||||||||||| ||||| ||| ||    | ||||||||||| ||||||||| |||||  |||||||||| ||||| |||| ||||    
T  7542962 aataagtaacgcgaattgtttggatgaaactacagtccacattgatacgatactttacttatcactttattacttggtaaacaatttgatacatttgc 7543059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 11 - 76
Target Start/End: Complemental strand, 19244789 - 19244726
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacag 76  Q
    ||||||||| | |||| ||||||||||||||||| ||||||||| |||||||| ||||||||||||    
T  19244789 aagaatccttaccactacttacttttctacaacc-aaaccaggt-aacttgctctgttgcaaacag 19244726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 6630711 - 6630755
Alignment:
Q  147 gtttggacgaaacgacaatctttgtggatacgatactctacttat 191  Q
    |||| |||||||||||||||| ||||||| |||||||||||||||    
T  6630711 gtttagacgaaacgacaatctatgtggatccgatactctacttat 6630755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 9898958 - 9899057
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttat-caatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||||||||  |||| ||||| ||||||| ||||||   |||||||| ||||||||||| |  | |||||  |||||||||| ||||||||||||||    
T  9898958 aaaataagtaacgtgaatggtttgaacgaaacaacaatccccgtggatacaatactctacttttagactttattacttggtaaacaatttggtacacttg 9899057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 227
Target Start/End: Complemental strand, 17382216 - 17382145
Alignment:
Q  156 aaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||  ||| |||||||||||||||| |||| |||||   |||||||||||||| ||||| ||||    
T  17382216 aaacgacaatccctgtagatacgatactctactcatcactttattcattggtaaacgatttagtacatttgc 17382145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 22412941 - 22413022
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||||||||||||| | || |||||||| ||  ||||||||| ||||||| | ||| |||| ||||||||||||| ||||||    
T  22412941 ttcgaagaatcctaaccgctacttactttcctgtaaccaaaac-aggtaaattcgctctgttacaaacagataaaagttgcaa 22413022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 227
Target Start/End: Original strand, 28589443 - 28589529
Alignment:
Q  141 cgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||| |||||  ||||||| ||||  ||||| ||||||||| ||||||||| ||| |   ||| |||||||||||||||||||||    
T  28589443 cgaattttttggttgaaacgaaaatccatgtggctacgatactttacttatcactttgttatttgataaacgatttggtacacttgc 28589529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 34478589 - 34478532
Alignment:
Q  162 caatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggta 220  Q
    ||||| ||||||||||||||||||||||| || |||||   ||||||||||||||||||    
T  34478589 caatccttgtggatacgatactctactta-cactttattatttggtaaacgatttggta 34478532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 20145106 - 20145159
Alignment:
Q  174 atacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||| ||||||||||||||| |||||  |||||| ||| |||||||||||||||    
T  20145106 ataccatactctacttatcactttattacttggtgaacaatttggtacacttgc 20145159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 22187733 - 22187680
Alignment:
Q  174 atacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||| ||||||||||||||| |||||  |||||| ||| |||||||||||||||    
T  22187733 ataccatactctacttatcactttattacttggtgaacaatttggtacacttgc 22187680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 24252124 - 24252186
Alignment:
Q  21 aacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaatt 85  Q
    |||||| ||||| ||||| ||||||||||  |  ||||||||| |||||||||||||||||||||    
T  24252124 aacactacttacatttctgcaaccaaaacacg--aaacttgctctgttgcaaacagataaaaatt 24252186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 28933587 - 28933620
Alignment:
Q  56 aacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||||||| |||||||||||||||||||||||||    
T  28933587 aacttgctctgttgcaaacagataaaaattgcaa 28933620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 20722209 - 20722274
Alignment:
Q  160 gacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||| |||||||||  |||||||||||| |  |||||  ||||||||||||||||||||| ||||    
T  20722209 gacaatccttgtggatattatactctacttaac--tttattacttggtaaacgatttggtacatttgc 20722274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 118; Significance: 6e-60; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 695 - 919
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaa-c 99  Q
    ||||||||||||||||| ||| | || ||||||||||| ||||||||| ||||||||||| || |||||||||||||||||||||||||   |||||| |    
T  695 agggggttcgaagaatcttaaccgcttcttacttttctgcaaccaaaaacaggtaaactttctctgttgcaaacagataaaaattgcaatctttctaaac 794  T
Q  100 ccttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||||| |||||||||||||||||||| |||||||||||||  | ||||||||||||||||||||||||   ||||||||||||||||||||||| |||||    
T  795 ccttatcttttatatcgtcaaacttataaaaataagtaacgtggattgtttggacgaaacgacaatctcaatggatacgatactctacttatcactttat 894  T
Q  200 atcttggtaaacgatttggtacactt 225  Q
      |||||| |||||||| ||||||||    
T  895 tacttggt-aacgatttagtacactt 919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 114; Significance: 2e-57; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 10 - 227
Target Start/End: Complemental strand, 70129 - 69913
Alignment:
Q  10 gaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttt 109  Q
    ||||||||||||   |||||||||||||||||||||||| |||||||||||||| | ||||||||| |||||||||||||   |||||||| ||| ||||    
T  70129 gaagaatcctaactgctgcttacttttctacaaccaaaaacaggtaaacttgctctattgcaaacaaataaaaattgcaacctttctaacctttatcttt 70030  T
Q  110 tatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaa 209  Q
    |||||| |||| | ||||||||||||||||  ||||||||||||||||||||||||| ||||| |||||||||| ||||| ||| |||||  ||||||||    
T  70029 tatatcatcaa-catacaaaaataagtaacgagaattgtttggacgaaacgacaatccttgtgtatacgatactttacttgtcactttattacttggtaa 69931  T
Q  210 acgatttggtacacttgc 227  Q
    | ||||||||||||||||    
T  69930 atgatttggtacacttgc 69913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 98749 - 98689
Alignment:
Q  105 acttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatc 166  Q
    ||||||||||||||||||| |||||||||||||||| || || || |||||||| |||||||    
T  98749 acttttatatcgtcaaact-acaaaaataagtaacaagatttattcggacgaaaggacaatc 98689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 2e-54; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 7 - 159
Target Start/End: Original strand, 20744549 - 20744699
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac 106  Q
    ||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||||||    
T  20744549 ttcgaagaatcctaaccgctgcttacttttctacaaccaaaac-aggtaaacttgctatgttgcaaacagataaaaattgcaactct-ctaacccttaac 20744646  T
Q  107 ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaac 159  Q
    |||||||||||||||||||||||||||||||||  ||| ||||||||||||||    
T  20744647 ttttatatcgtcaaacttacaaaaataagtaacgtgaaatgtttggacgaaac 20744699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 54 - 227
Target Start/End: Original strand, 19004153 - 19004325
Alignment:
Q  54 taaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttgga 153  Q
    |||||||||  |||||||||||||||||||||||||   || ||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  19004153 taaacttgccctgttgcaaacagataaaaattgcaactatt-taacccttatcttttatatcgtcaaacttacaaaaataagtaacgtgaattgtttgga 19004251  T
Q  154 cgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    | ||| |||||||  |||||||||||||||| |||||||| |||||  ||||||||||||||| ||||||||||    
T  19004252 caaaatgacaatccatgtggatacgatactccacttatcactttattacttggtaaacgatttagtacacttgc 19004325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 17432102 - 17431884
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac 106  Q
    ||||||||||||||| | |||||||||||||| |||||||||| || |||||||||| ||||||||||||| ||||||| |||  ||| |||||||||      
T  17432102 ttcgaagaatcctaaccgctgcttacttttctgcaaccaaaacaag-taaacttgctctgttgcaaacagaaaaaaattacaactctt-taacccttata 17432005  T
Q  107 ttttatatcgtcaaa-cttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttg 205  Q
    |||||||||| |||| |||| ||||||||||| |  || ||||||||| ||||||||||||| |||||||||||||||||||||  || |||||  ||||    
T  17432004 ttttatatcgccaaaacttataaaaataagtagcgtgagttgtttggatgaaacgacaatctctgtggatacgatactctactttccactttattacttg 17431905  T
Q  206 gtaaacgatttggtacacttg 226  Q
    ||||||||||| |||||||||    
T  17431904 gtaaacgatttagtacacttg 17431884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 2 - 226
Target Start/End: Original strand, 24245418 - 24245642
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||||||||||||||| |  ||||||||||||| |||| ||||| ||||||||||||| ||||| ||||| |||||||| | ||   |||||||||    
T  24245418 ggggattcgaagaatcctaaccgttgcttacttttctgcaactaaaac-aggtaaacttgctttgttggaaacaaataaaaatcgaaacctttctaaccc 24245516  T
Q  102 tt--aacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||  | |||||||||  |||| |||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  24245517 ttttatcttttatattctcaa-cttacaaaaataagtaacgcgagttgtttggacgaaacgacaatccttgtggatacgatactctacttatcactttat 24245615  T
Q  200 atcttggtaaacgatttggtacacttg 226  Q
      | |||||| |||||||  |||||||    
T  24245616 tacatggtaagcgatttgtgacacttg 24245642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 7 - 227
Target Start/End: Original strand, 20315309 - 20315528
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagact-tctaacccttaa 105  Q
    ||||||||| ||||| | || |||||| || | |||||||||| | ||||||||||| ||||||||||||||||||||||||||  | | || |||||||    
T  20315309 ttcgaagaaccctaatcgcttcttactattttgcaaccaaaac-atgtaaacttgctttgttgcaaacagataaaaattgcaagtttctttatcccttaa 20315407  T
Q  106 cttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttg 205  Q
     ||||||||||||||  | | |||||||||| || |||||||||||||||||| || ||||  |||||||||||||||||||||||||  ||||  ||||    
T  20315408 attttatatcgtcaacttaataaaaataagttacgcgaattgtttggacgaaaggataatccatgtggatacgatactctacttatcacattattacttg 20315507  T
Q  206 gtaaacgatttggtacacttgc 227  Q
    |||||||| |||||||||||||    
T  20315508 gtaaacga-ttggtacacttgc 20315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 39434674 - 39434464
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttct-aacccttaa 105  Q
    ||||||||||||||| |  ||||||||||||| ||| |||||| ||||||||||||        |||||||||||||||||||  ||| | |||||||||    
T  39434674 ttcgaagaatcctaaccgttgcttacttttctgcaaacaaaac-aggtaaacttgc--------aaacagataaaaattgcaattctttttaacccttaa 39434584  T
Q  106 cttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttg 205  Q
    |||||||||||||||  | | ||||||||||||| |||||||||||||| ||| |||||||  ||||||||||||  |||||||||||||||||  ||||    
T  39434583 cttttatatcgtcaagttaataaaaataagtaacgcgaattgtttggacaaaaggacaatccatgtggatacgattttctacttatcaatttattacttg 39434484  T
Q  206 gtaaacgatttggtacacttg 226  Q
    |||||||| ||||||||||||    
T  39434483 gtaaacga-ttggtacacttg 39434464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 34128860 - 34128637
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttct-aacc 100  Q
    |||| ||||||||||||||| |  ||||||||||||| |||||||||| ||||||||||||| | |||||||||  | |||||| |||| ||| | ||||    
T  34128860 ggggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaac-aggtaaacttgctctattgcaaacaagtcaaaatttcaagtctttttaacc 34128762  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttata 200  Q
    ||||||||||||| | |||| |||| ||||||||| |||  ||||| ||||||||||| ||||||   ||||||||||||| ||||||||||| |||||     
T  34128761 cttaacttttataccttcaa-cttataaaaataagaaacgagaattttttggacgaaaggacaattcctgtggatacgatattctacttatcactttatt 34128663  T
Q  201 tcttggtaaacgatttggtacacttgc 227  Q
     |||||| ||||| |||||||||||||    
T  34128662 acttggtcaacga-ttggtacacttgc 34128637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 2 - 227
Target Start/End: Original strand, 15375769 - 15375981
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||||||||||||||| |  | ||||||||| | |||||||||  |||  |||||||| ||||||||||| |||||||||||||    |||||       
T  15375769 ggggattcgaagaatcctaaccgttacttacttttatgcaaccaaaaataggcgaacttgctctgttgcaaacaaataaaaattgcaa----tctaa--- 15375861  T
Q  102 ttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatat 201  Q
         ||||||| |||||| ||| |||||||||||||  | |||| |||||||||||||||||||  |||||||| |||||||||||||||| |||||      
T  15375862 -----ttttataccgtcaa-cttgcaaaaataagtaatgcaaattttttggacgaaacgacaatccctgtggataggatactctacttatcattttatta 15375955  T
Q  202 cttggtaaacgatttggtacacttgc 227  Q
     |||||||||||||||||||||||||    
T  15375956 tttggtaaacgatttggtacacttgc 15375981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 70 - 225
Target Start/End: Complemental strand, 19051704 - 19051551
Alignment:
Q  70 caaacagataaaaattgcaagacttctaacccttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatcttt 169  Q
    |||||| |||||||||| || | |||||||||||||||||||| || |||||||||||||||||||||||| ||||||||| || | ||| ||||||  |    
T  19051704 caaacaaataaaaattgaaa-atttctaacccttaacttttatgtcatcaaacttacaaaaataagtaacaagaattgtttagatggaacaacaatccct 19051606  T
Q  170 gtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    | |||||||| |||| |||||||| |||||  ||| ||||||||||||||||||||    
T  19051605 g-ggatacgacactcaacttatcactttattactttgtaaacgatttggtacactt 19051551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 23388813 - 23388935
Alignment:
Q  103 taacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatc 202  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||| |||||||| |||||||  ||||||||||||||||||||||||| |||||  |    
T  23388813 taacttttacaccgtcaaacttacaaaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctacttatcactttattac 23388912  T
Q  203 ttggtaaacgatttggtacacttg 226  Q
    ||||| ||| | ||||||||||||    
T  23388913 ttggttaac-aattggtacacttg 23388935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 10 - 227
Target Start/End: Complemental strand, 24140652 - 24140443
Alignment:
Q  10 gaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaacttt 109  Q
    |||||||||||| |  ||||||||||||| |||||||||  ||||||||||||| ||| ||| |||||||||||||| ||| ||      | |||||  |    
T  24140652 gaagaatcctaaccgttgcttacttttctgcaaccaaaat-aggtaaacttgctctgtcgcacacagataaaaattggaagtct------ctttaaccct 24140560  T
Q  110 tatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaa 209  Q
    |||||||| ||  | | ||||||| ||||| |||||||||||||||||| |||||||   |||||||| ||||||||||||||| |||||  ||||||||    
T  24140559 tatatcgttaacttaataaaaatatgtaacgcgaattgtttggacgaaaggacaatcccagtggatacaatactctacttatcactttattacttggtaa 24140460  T
Q  210 acgatttggtacacttgc 227  Q
    |||| |||||||||||||    
T  24140459 acga-ttggtacacttgc 24140443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 109 - 227
Target Start/End: Original strand, 25550487 - 25550603
Alignment:
Q  109 ttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggta 208  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||||| |||||||  |||||||| |||||||||||||||| |||||  |||||||    
T  25550487 ttatatcgtcaa-cttacaaaa-taagtaacaagaattgtttggacgaaatgacaatccctgtggatatgatactctacttatcactttattacttggta 25550584  T
Q  209 aacgatttggtacacttgc 227  Q
    ||||||||| |||||||||    
T  25550585 aacgatttgatacacttgc 25550603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 24266955 - 24267053
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||||||||||||||||||| ||| || |||| ||||||||||||||||||||||| || |||||  ||||||||||||||||||||||||||    
T  24266955 aaaataagtaacacgaattgtttggacaaaatgataatccttgtggatacgatactctactta-cactttattacttggtaaacgatttggtacacttgc 24267053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 24343586 - 24343684
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||||||||||||||||||| ||| || |||| ||||||||||||||||||||||| || |||||  ||||||||||||||||||||||||||    
T  24343586 aaaataagtaacacgaattgtttggacaaaatgataatccttgtggatacgatactctactta-cactttattacttggtaaacgatttggtacacttgc 24343684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 7 - 190
Target Start/End: Original strand, 20563971 - 20564142
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac 106  Q
    |||||||||||||||   || ||||||||||| ||||||||| || ||||| ||||| |||||||||||||||||||||||||  |            ||    
T  20563971 ttcgaagaatcctaactgcttcttacttttctgcaaccaaaaacaagtaaatttgctctgttgcaaacagataaaaattgcaactc------------ac 20564058  T
Q  107 ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
    ||||||| |||||||||||||||||||||||||  |||  ||||||||||||  ||||||  ||||||||||||||||||||||    
T  20564059 ttttataccgtcaaacttacaaaaataagtaactagaagcgtttggacgaaagaacaatccatgtggatacgatactctactta 20564142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 7 - 199
Target Start/End: Complemental strand, 20858892 - 20858713
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac 106  Q
    ||||| ||||||||| | |||||||||||| | |||||||||  ||||||| | ||| |||||||||| |||||||||||         ||||   | ||    
T  20858892 ttcgacgaatcctaaccgctgcttacttttatgcaaccaaaa-taggtaaattcgctttgttgcaaaccgataaaaattg---------taac---ttac 20858806  T
Q  107 ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||||||| |||||||||||||||||||||||||| |||||||| |||| ||| ||||||||  |||||||||||||||||||||||| |||||    
T  20858805 ttttataccgtcaaacttacaaaaataagtaacaagaattgttcggacaaaaggacaatctccgtggatacgatactctacttatcattttat 20858713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 28 - 227
Target Start/End: Original strand, 18208151 - 18208347
Alignment:
Q  28 cttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact-------tttatatcgtcaa 120  Q
    ||||||||||| ||||||||  ||||||| |||||| |  ||||||||||||||||||||||  | || |||||||||||       |||||||| ||||    
T  18208151 cttacttttctgcaaccaaa--caggtaa-cttgctctactgcaaacagataaaaattgcaa--cctccaacccttaactcttttattttatatcatcaa 18208245  T
Q  121 acttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggta 220  Q
    |   |||||| ||||||||| ||||||||||||||||| |||||||  |||||||||||||||||||||| || |||||  ||| |||||||||||||||    
T  18208246 a---acaaaa-taagtaacatgaattgtttggacgaaaggacaatccatgtggatacgatactctactta-cactttattactttgtaaacgatttggta 18208340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 11 - 226
Target Start/End: Complemental strand, 36175348 - 36175135
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact--t 108  Q
    ||||||| ||| | || |||||||||||||||||||||| |||||| |||||| ||||| |||||||||||||||||||    ||||||||| ||||  |    
T  36175348 aagaatcataaccgcttcttacttttctacaaccaaaac-aggtaa-cttgctttgttgaaaacagataaaaattgcaatc--tctaaccctcaactctt 36175253  T
Q  109 ttatatcgtcaaact-tacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggt 207  Q
    |||| |  |  || | | |||||||||||||| |   |||||||||||||||||||||| || |||||||||||||||||  | || |||||  ||||||    
T  36175252 ttatttattttaattgttcaaaaataagtaacgcatgttgtttggacgaaacgacaatccttatggatacgatactctac-aaacactttattacttggt 36175154  T
Q  208 aaacgatttggtacacttg 226  Q
    |||||||||||||||||||    
T  36175153 aaacgatttggtacacttg 36175135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 2 - 225
Target Start/End: Complemental strand, 15691000 - 15690780
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||||||||||||||| |||||||||||||||| |||||||||| ||||||  ||||| |||| | |||| |||||||||||||  || |||||||    
T  15691000 ggggattcgaagaatcctaa-cactgcttacttttctgcaaccaaaac-aggtaat-ttgctctgttacgaacaaataaaaattgcaaatct-ctaaccc 15690905  T
Q  102 ttaa---cttttatatc---gtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaat 195  Q
    || |   ||||||| |    ||||| ||   |||||||||||||  |||||| |||||||||||||||||  | |||||||||||||||||||||||| |    
T  15690904 tttaactcttttatttatttgtcaa-ct---aaaaataagtaacgagaattggttggacgaaacgacaattctcgtggatacgatactctacttatcact 15690809  T
Q  196 ttatatcttggtaaacgatttggtacactt 225  Q
    |||| | |||||||||||||||||| ||||    
T  15690808 ttat-tattggtaaacgatttggtaaactt 15690780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 56 - 226
Target Start/End: Complemental strand, 22755694 - 22755522
Alignment:
Q  56 aacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact-------tttatatcgtcaaacttacaaaaataagtaacacgaattgt 148  Q
    |||||||| |||||||||||||||||||||| ||  || |||||||||||||       |||||||||| |||||    ||||||| |||  | ||||||    
T  22755694 aacttgctctgttgcaaacagataaaaattgtaaatct-ctaacccttaactcttttattttatatcgtaaaact----aaaataaataatgccaattgt 22755600  T
Q  149 ttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||| |||||||||||| || ||||||||||||||||||||||  || ||  |||||||||||||| ||||||||||    
T  22755599 ttggaagaaacgacaatccttatggatacgatactctacttatctcttcattacttggtaaacgattcggtacacttg 22755522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 16523676 - 16523852
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||| ||||||||||| | ||||||||||||||| ||| |||| |||||||| | ||| ||||||||||||||||||||||||  |||           
T  16523676 aggggattcaaagaatcctaaccgctgcttacttttctataacaaaaaacaggtaaattcgctctgttgcaaacagataaaaattgca--act------- 16523766  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
        ||||||| |  ||||||||||||||| |||||||||  ||||||| |||||||| ||||| |  ||||||||| ||||||||||||    
T  16523767 ----acttttaaactgtcaaacttacaaaactaagtaacaataattgttcggacgaaaggacaaaccctgtggatacaatactctactta 16523852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 15470021 - 15469936
Alignment:
Q  142 gaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||| ||||||||||||||   |||||||||||||||| || ||||| |||||  ||||||||||||||||||||||||||    
T  15470021 gaattgtttagacgaaacgacaattcatgtggatacgatactcgacctatcactttattacttggtaaacgatttggtacacttgc 15469936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 17171553 - 17171650
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    ||||||| |||| ||||||| || |||||||||||||||  |||||||||||| |||||||||||| |||||  |||| |||| ||||||||||||||    
T  17171553 aaaataattaacgcgaattgcttagacgaaacgacaatccatgtggatacgatgctctacttatcactttattacttgataaaagatttggtacactt 17171650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 225
Target Start/End: Complemental strand, 34487736 - 34487640
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    |||||||||||| |||||||||| |||||||||||||||  |||||||| |||| |||||||| || |||||  |||||||||| |||||||||||||    
T  34487736 aaaataagtaacgcgaattgtttagacgaaacgacaatccatgtggatatgatattctactta-cactttattacttggtaaacaatttggtacactt 34487640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 28664987 - 28664802
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||||||| ||| |  |||||| |||||| |||||||||| ||||||| | ||| ||||||||||||||||||||||| |               
T  28664987 aggggattcgaagaatcttaaccgttgcttatttttctgcaaccaaaac-aggtaaattcgctctgttgcaaacagataaaaattgcga----------- 28664900  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||||| ||||||| |||||||||| ||||||||||||||  |||||||| | |||||| |||| ||  | || |||||||||||||||||||| |||||    
T  28664899 cttaa-ttttataccgtcaaacttgcaaaaataagtaacgagaattgttcgcacgaaaggacagtccctatgaatacgatactctacttatcactttat 28664802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 20549700 - 20549766
Alignment:
Q  124 tacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
    ||||||||||||||||| |||||||| |||||||| |||||||  ||||||||||||||||||||||    
T  20549700 tacaaaaataagtaacaagaattgttcggacgaaaggacaatccctgtggatacgatactctactta 20549766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 24852173 - 24852271
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||  ||||||||| |||||||| ||||||  ||||||||||||||| ||||||||| |||||  |||||||| |||||| ||| ||||||    
T  24852173 aaataagtaacgtgaattgtttagacgaaacaacaatccatgtggatacgatactatacttatcattttattacttggtaatcgatttagtagacttgc 24852271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 118 - 199
Target Start/End: Original strand, 17315090 - 17315171
Alignment:
Q  118 caaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||||||||||||||||||||||  |||||||| ||| |||| |||||||  ||||||||||||||| ||||||||| |||||    
T  17315090 caaacttacaaaaataagtaactagaattgttcggaagaaaggacaatccatgtggatacgatactttacttatcactttat 17315171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 18937846 - 18937748
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||||  |||||||||||||||||| ||||||  | || |||||||||| ||||||||| |||||  |||  |||||||||||||||||||||    
T  18937846 aaaataagtaacgtgaattgtttggacgaaacaacaatccctctgaatacgatact-tacttatcactttattacttaataaacgatttggtacacttgc 18937748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 19086181 - 19086276
Alignment:
Q  130 aataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    ||||||||||| |||||| || ||| |||| |||||   ||||||||  ||||||||||||||| |||||  ||||||||||||||||||||||||    
T  19086181 aataagtaacatgaattgatttgacaaaacaacaattcatgtggatataatactctacttatcactttattacttggtaaacgatttggtacactt 19086276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 25402337 - 25402436
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||| |||||  || ||||||||||||||||  ||||||||| ||||||||||||||| ||  |  ||||| |||| |||||||||||||||    
T  25402337 aaaataagtaacgcgaatcattaggacgaaacgacaatccctgtggatacaatactctacttatcacttccttacttggcaaacaatttggtacacttgc 25402436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 17185561 - 17185464
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||| |||||  |||||||||||  ||||||||||||  ||| ||||||||||||||||||||| |||||   |||||||| ||||| |||||||||    
T  17185561 aaatacgtaacgtgaattgtttggttgaaacgacaatccctgtagatacgatactctacttatcactttattatttggtaaatgatttagtacacttg 17185464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 26120965 - 26120867
Alignment:
Q  126 caaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    |||||||||||||  | |||||||||||||||||||||||| || || ||| |||||||||||||  | |||||  | |||||||| |||||||||||||    
T  26120965 caaaaataagtaatgctaattgtttggacgaaacgacaatccttttgaatatgatactctactta-aactttattacatggtaaacaatttggtacactt 26120867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 19283870 - 19283952
Alignment:
Q  143 aattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    ||||||||||||||||||  |||  |||||||||| ||||||||||||||| |||||   |||||||||||||| || |||||    
T  19283870 aattgtttggacgaaacgttaattcttgtggatacaatactctacttatcactttattatttggtaaacgatttagtgcactt 19283952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 24260617 - 24260560
Alignment:
Q  126 caaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatact 183  Q
    |||||||||||||| || ||| ||||||||||| ||||||| ||||||||||||||||    
T  24260617 caaaaataagtaacgcggattttttggacgaaatgacaatccttgtggatacgatact 24260560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 20549591 - 20549679
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||| ||||||||||||||| | ||||||||||  || ||||||||| |||||||| |  || ||||| |||||| ||||||||||||    
T  20549591 aggggtttcgaagaatcctaaccgctgcttacttgcctgcaaccaaaaacaggtaaaatcactctgttgtaaacaggtaaaaattgcaa 20549679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 26121323 - 26121422
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||| |||||||||| ||||  ||||| ||||| | ||||  ||||||||| |||||||||||| || |||||  |||| ||||||||||||||||||||    
T  26121323 aaaagtaagtaacacaaatttattggatgaaacaaaaatccctgtggatactatactctactta-cattttattacttgctaaacgatttggtacacttg 26121421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 24656854 - 24656952
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||||||||||||| |||||||| ||||||  ||| |||  ||| |||||||||| | |||||   |||| |||| || ||||||||||||    
T  24656854 aaataagtaacacgaattgtttagacgaaacaacaatccatgttgatttgattctctacttataattttattaattgggaaactatctggtacacttgc 24656952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 17635378 - 17635325
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgata 181  Q
    |||||||||||||||||||||||||||||| | ||||| | |||||||| ||||    
T  17635378 aaaataagtaacacgaattgtttggacgaaccaacaatttatgtggatatgata 17635325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 227
Target Start/End: Original strand, 26110461 - 26110560
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||| ||||||| ||||| ||||| ||||| | ||||  ||||||||  |||||||||||| || |||||  |||| ||||||||| ||||||||||    
T  26110461 aaaaatatgtaacacaaattgattggatgaaacaaaaatccctgtggatattatactctactta-cattttattacttgataaacgattcggtacacttg 26110559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 26121198 - 26121280
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaatt 85  Q
    |||| ||| ||||||||||| |||| |||||||||||  ||||||||  || | |||||||| | |||||||||||||||||||    
T  26121198 ggggattcaaagaatcctaaccactacttacttttctgtaaccaaaaatagat-aacttgctctcttgcaaacagataaaaatt 26121280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 15544103 - 15544051
Alignment:
Q  174 atacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||||||| | || |||||  ||||||||||||||||||||||||||    
T  15544103 atacgatactctactga-cagtttattacttggtaaacgatttggtacacttgc 15544051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 18937945 - 18937889
Alignment:
Q  29 ttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattg 86  Q
    |||| ||||| ||||||||| || |||| |||||| ||||||||||||||||||||||    
T  18937945 ttacatttctgcaaccaaaaacatgtaa-cttgctctgttgcaaacagataaaaattg 18937889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 23380303 - 23380356
Alignment:
Q  174 atacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||| | ||||||||| |||||  |||||||||| |||||||||||||||    
T  23380303 atacgatagtttacttatcagtttattacttggtaaacaatttggtacacttgc 23380356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 24167600 - 24167681
Alignment:
Q  144 attgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    |||||||||| ||||||||||||  |||  ||| |||||||||||||  | |||||  |||||||||||||||  |||||||    
T  24167600 attgtttggaagaaacgacaatccatgtatatatgatactctacttactactttattacttggtaaacgatttaatacactt 24167681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 89
Target Start/End: Complemental strand, 24260688 - 24260655
Alignment:
Q  56 aacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||||||| |||||||||||||||||||||||||    
T  24260688 aacttgctctgttgcaaacagataaaaattgcaa 24260655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 28253338 - 28253278
Alignment:
Q  169 tgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgcata 230  Q
    |||| |||||||| |||||||| || |||||  ||||||||||||||||||||| |||||||    
T  28253338 tgtgaatacgatattctactta-cactttattacttggtaaacgatttggtacatttgcata 28253278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 202 - 230
Target Start/End: Original strand, 17769469 - 17769497
Alignment:
Q  202 cttggtaaacgatttggtacacttgcata 230  Q
    |||||||||||||||||||||||||||||    
T  17769469 cttggtaaacgatttggtacacttgcata 17769497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 39434445 - 39434405
Alignment:
Q  230 atcaattttttggcgccgttgacgagtattgttgatatttt 270  Q
    ||||| ||||||||||||||| || ||||||||||||||||    
T  39434445 atcaagtttttggcgccgttgccgggtattgttgatatttt 39434405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 83; Significance: 5e-39; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 7 - 227
Target Start/End: Complemental strand, 21484 - 21277
Alignment:
Q  7 ttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaac 106  Q
    ||||||||||||||| | || |||||||||||  ||||||||| |||||||||| || ||||||||||| |||||||||||||           ||||||    
T  21484 ttcgaagaatcctaatcgctacttacttttctgaaaccaaaac-aggtaaacttcctctgttgcaaacaaataaaaattgcaa-----------cttaac 21397  T
Q  107 ttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttgg 206  Q
    ||||||| ||||||||||||||||||| |||||| |||||||| |||||||| |||||||  |||||||| |||||||||||||||| |||||  ||| |    
T  21396 ttttataccgtcaaacttacaaaaatatgtaacaagaattgttcggacgaaaggacaatccctgtggatatgatactctacttatcactttattactttg 21297  T
Q  207 taaacgatttggtacacttgc 227  Q
    | ||||| |||||||||||||    
T  21296 ttaacga-ttggtacacttgc 21277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 25200 - 24987
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| || |||||||||||| |  ||||||||||||| |||||||||| ||||||||||||| ||||||||| ||| |||||||||||               
T  25200 aggggatttgaagaatcctaaccgttgcttacttttctgcaaccaaaac-aggtaaacttgctctgttgcaaatagagaaaaattgcaa----------- 25113  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttata 200  Q
    ||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||  ||||||   |||| ||||||||||| |||||||| ||||      
T  25112 cttaacttttataccgtcaaacttacaaaaataagtaacaataattgtttggacgaacagacaattcctgtgtatacgatactcaacttatcattttaat 25013  T
Q  201 tcttggtaaacgatttggtacacttgc 227  Q
     ||| || ||||| |||||||||||||    
T  25012 actttgttaacga-ttggtacacttgc 24987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 2 - 228
Target Start/End: Original strand, 263 - 489
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagactt-ctaacc 100  Q
    |||| |||||||||||||||   |||||||  |||||| |||||||| ||||| | |||||| | |||||| ||||||||||||||||||||| ||||||    
T  263 ggggattcgaagaatcctaacggctgcttatatttctaaaaccaaaaacaggtta-cttgctctattgcaagcagataaaaattgcaagactttctaacc 361  T
Q  101 cttaa-cttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||| | ||||||||||||||| |||| | |||||  ||||  ||||||||||||||||| |||||||  ||| ||||||||||||||| ||||| |||||    
T  362 ctttatcttttatatcgtcaa-cttatataaatatctaacgagaattgtttggacgaaatgacaatccctgttgatacgatactctacgtatcactttat 460  T
Q  200 atcttggtaaacgatttggtacacttgca 228  Q
      ||| ||||||||| || ||||||||||    
T  461 tactttgtaaacgatatgatacacttgca 489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 2 - 221
Target Start/End: Original strand, 35868 - 36088
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaaccc 101  Q
    |||| ||| ||||||||||| | |||||||||||||| ||||||||| ||||||| ||| || |||| |||| |||||||||||||||  || |||||||    
T  35868 ggggattctaagaatcctaaccgctgcttacttttctgcaaccaaaatcaggtaa-ctttctttgttccaaatagataaaaattgcaaatct-ctaaccc 35965  T
Q  102 tt-aacttttatat-----cgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaat 195  Q
    || |||| ||||||     |||||||||||   |||||||||||||||||| |||||| |||||||||||   ||||||||||||||||||||||||| |    
T  35966 tttaactcttatattttatcgtcaaactta---aaataagtaacacgaattatttggatgaaacgacaattcatgtggatacgatactctacttatcact 36062  T
Q  196 ttatatcttggtaaacgatttggtac 221  Q
    ||||  ||| ||||| ||||| ||||    
T  36063 ttattacttagtaaatgatttagtac 36088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 3655 - 3533
Alignment:
Q  103 taacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatc 202  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||| |||||||| |||||||  ||||||||||||||||||||||||| |||||  |    
T  3655 taacttttacaccgtcaaacttacaaaaataagtaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctacttatcactttattac 3556  T
Q  203 ttggtaaacgatttggtacacttg 226  Q
    ||||| ||| | ||||||||||||    
T  3555 ttggttaac-aattggtacacttg 3533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 12162 - 12109
Alignment:
Q  174 atacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||| | ||||||||| |||||  |||||||||| |||||||||||||||    
T  12162 atacgatagtttacttatcagtttattacttggtaaacaatttggtacacttgc 12109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 656 - 482
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||||||||||| | |||||||||||||| ||||||||| |||||||| | ||| ||||||||||||||||||||||||  ||||          
T  656 aggggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaa-caggtaaattcgctctgttgcaaacagataaaaattgca--actt------ 566  T
Q  101 cttaacttttatatcgtc-aaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctac 187  Q
        |||||||||  ||| |||||||||||||||| ||||| |||||||| |||||||| |||||||  |||||||||||||||||||    
T  565 ----acttttatactgtcaaaacttacaaaaataattaacaagaattgttcggacgaaaggacaatccatgtggatacgatactctac 482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 828 - 728
Alignment:
Q  128 aaaataagtaaca-cgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||||||||  || ||||||||||||||||||||||| |||| ||||| ||||||||||||||| |||||  |||||||||||||||||||||||||    
T  828 aaaataagtaacgtcggattgtttggacgaaacgacaatccttgttgatacaatactctacttatcactttattacttggtaaacgatttggtacacttg 729  T
Q  227 c 227  Q
    |    
T  728 c 728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 61; Significance: 7e-26; HSPs: 4)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 80 - 227
Target Start/End: Original strand, 48146 - 48289
Alignment:
Q  80 aaaattgcaagacttctaacccttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacga 179  Q
    ||||||||||| ||| ||||||||| |||||| |||||| ||||||||||||||||||| | ||||||||||||||||  |||||||    | |||||||    
T  48146 aaaattgcaagtcttttaacccttatcttttacatcgtc-aacttacaaaaataagtaaga-gaattgtttggacgaattgacaatc--catagatacga 48241  T
Q  180 tactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||||| |||||  |||||||||||||||| |||| ||||    
T  48242 tactctacttatcactttattacttggtaaacgatttgatacatttgc 48289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 234465 - 234369
Alignment:
Q  103 taacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    |||||||||||  || |||||||||||||||||| ||| |||||||| |||||||| |||||||| ||||| ||||||||| ||||||||| |||||    
T  234465 taacttttatagagttaaacttacaaaaataagtgacaagaattgttcggacgaaaggacaatctctgtgggtacgatactatacttatcactttat 234369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 54931 - 54862
Alignment:
Q  156 aaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    |||||||||||  ||||||||| ||||||||||||||| |||||  ||||||||||||||||||||||||    
T  54931 aaacgacaatccctgtggatacaatactctacttatcactttattacttggtaaacgatttggtacactt 54862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 55086 - 55003
Alignment:
Q  2 gggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattg 86  Q
    |||| ||| |||| |||||| || || || ||||| | ||||||||| ||||||| |||||||||| ||||||| ||||||||||    
T  55086 ggggattcaaagagtcctaaccagtgttttcttttgtgcaaccaaaaacaggtaa-cttgctatgtcgcaaacaaataaaaattg 55003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 32 - 227
Target Start/End: Original strand, 168203 - 168397
Alignment:
Q  32 cttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact-------tttatatcgtcaaactt 124  Q
    ||||||||||||||||| || |||| |||||| |||||||||||||||||||||| ||    |||||||||||  |       ||||||||||||| |||    
T  168203 cttttctacaaccaaaaacaagtaa-cttgctctgttgcaaacagataaaaattgaaatc--tctaacccttatgtcttttattttatatcgtcaa-ctt 168298  T
Q  125 acaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacact 224  Q
    |   |||||||||||||||  | ||| || |||||||||||| | |||||||||||||||||||||||| |||||  |||||||||||||||||||||||    
T  168299 a---aaataagtaacacgagctatttagaagaaacgacaatcct-gtggatacgatactctacttatcactttattacttggtaaacgatttggtacact 168394  T

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Target: scaffold0263 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 15872 - 15708
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagac-ttctaac 99  Q
    ||||| |||||||||| |||| | |||||||||||||  ||||||||| ||||| |||||||| |||||||||  ||||||||||||||||| |||||||    
T  15872 aggggattcgaagaatactaaccgctgcttacttttccgcaaccaaaaacaggt-aacttgctctgttgcaaattgataaaaattgcaagactttctaac 15774  T
Q  100 c-cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaat 165  Q
    |  ||| |||||||||| || |||||| |||||||  ||||  ||||||||||||||||| ||||||    
T  15773 cgtttatcttttatatcatc-aacttataaaaatatctaacgagaattgtttggacgaaatgacaat 15708  T

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Target: scaffold0102 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 35763 - 35534
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| || |||||||| ||| | |||||||| ||||| |||||||||| |||||| |||||| ||||||| ||| |||||||||||||  || ||||||    
T  35763 aggggatttgaagaatcttaaccgctgcttacctttctgcaaccaaaac-aggtaa-cttgctttgttgcagacaaataaaaattgcaaatct-ctaacc 35667  T
Q  101 cttaa---cttttat---atcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaa 194  Q
    ||| |   |||||||   ||| |||||||||   ||||||||||  ||||||||||||||||||||| ||||  ||||||||| |||||||| ||||||     
T  35666 ctttaactcttttattttatcatcaaactta---aaataagtaaggcgaattgtttggacgaaacgaaaatccatgtggatacaatactctatttatcac 35570  T
Q  195 tttatatcttggtaaacgatttggtacacttgcata 230  Q
    |||||  |||| ||||||||| | |||| |||||||    
T  35569 tttattacttgataaacgattagatacatttgcata 35534  T

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Target: scaffold0034 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 76630 - 76455
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacc 100  Q
    ||||| ||||||||||||||| |  ||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||||| ||||||               
T  76630 aggggattcgaagaatcctaatcggtgcttacttttctacaaccaaaaacaggtaaatttgctatgttgtaaacatataaaatttgcaa----------- 76542  T
Q  101 cttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactta 190  Q
      ||||||||||| | ||||   ||||||||||||||||| |||||||| ||||||||  ||||||  |||||||| |||||||||||||    
T  76541 -ctaacttttataccctcaa--ctacaaaaataagtaacaagaattgttcggacgaaagaacaatccctgtggatatgatactctactta 76455  T

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Target: scaffold0054 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 72236 - 72123
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttct-aac 99  Q
    ||||| ||||||||||||| |  ||||||||||||||| |||| ||||  | ||||||||||| ||||||||||||||||||||||||||  |||| |||    
T  72236 aggggattcgaagaatccttactactgcttacttttctgcaactaaaaatacgtaaacttgctctgttgcaaacagataaaaattgcaagctttctaaac 72137  T
Q  100 ccttaacttttata 113  Q
    |||||| |||||||    
T  72136 ccttaatttttata 72123  T

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Target: scaffold0650 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 6385 - 6287
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||  ||||||||||||||||||| ||||||  ||||||||||||||| ||||||| | |||||  ||| |||||||||||| |||||||||    
T  6385 aaataagtaatgcgaattgtttggacgaaacaacaatccatgtggatacgatactttacttatgactttattacttcgtaaacgatttgatacacttgc 6287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 181706 - 181803
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||||||||||| || ||||||| |||||||||||| |||||||||||||||| | |||||| |||||  ||||||||  |||||||||||||||    
T  181706 aaaataagtaacacgacttatttggacaaaacgacaatctatgtggatacgatactc-atttatcactttattacttggtaattgatttggtacacttg 181803  T

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Target: scaffold0019; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 11338 - 11241
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||||||  | ||||||||||  ||||| ||||||  ||| |||| |||||||||||||||| |||||   ||| ||||| |||| |||||||||    
T  11338 aaataagtaatgcaaattgtttggttgaaacaacaatccatgtagatatgatactctacttatcactttattatttgataaacaatttagtacacttg 11241  T

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Target: scaffold0427 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 128 - 191
Target Start/End: Original strand, 2818 - 2881
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttat 191  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||    
T  2818 aaaataagtaacacgaattgtttggacgaaacgacaattcatgtggatacgatactcaacttat 2881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 2720 - 2777
Alignment:
Q  29 ttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||||||||||||||  |||||| |||| |||||||||||||||| | |||||||||||||    
T  2720 ttacttttctacaac--aaaccatgtaa-cttgctatgttgcaaataaataaaaattgcaa 2777  T

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Target: scaffold0062 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 41 - 199
Target Start/End: Original strand, 43140 - 43298
Alignment:
Q  41 aaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaagacttctaacccttaact-------tttatatcgtcaaacttacaaaaata 133  Q
    |||||||| ||||||| |||||| |||||||||||||||||||||||||    ||||||||||| ||       |||||||||||||  |    ||||||    
T  43140 aaccaaaaacaggtaa-cttgctctgttgcaaacagataaaaattgcaatc--tctaacccttatctcttttattttatatcgtcaattt----aaaata 43232  T
Q  134 agtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttat 199  Q
    ||||||||||  ||||| ||||||||||||||| ||||||||||| |||| ||||||||| |||||    
T  43233 agtaacacgagctgtttagacgaaacgacaatccttgtggatacgttactttacttatcactttat 43298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 2469 - 2371
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||| |||| | ||||||||||| |||| | |||||  ||||||||||||||||||||||||  |||||   ||||||||||||||||||||||||    
T  2469 aaaataattaacgctaattgtttggaagaaatgtcaatccatgtggatacgatactctacttatccctttattatttggtaaacgatttggtacacttg 2371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 2500 - 2402
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    ||||||| |||| | ||||||||||| |||| | |||||  ||||||||||||||||||||||||  |||||   ||||||||||||||||||||||||    
T  2500 aaaataattaacgctaattgtttggaagaaatgtcaatccatgtggatacgatactctacttatccctttattatttggtaaacgatttggtacacttg 2402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 4484 - 4582
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||||||||||||||  |||||| |||||||  ||||||||||||||||| |||| || ||| |  |||||||||||||| |||||| ||||    
T  4484 aaataagtaacacgaattgtttaaacgaaatgacaatccatgtggatacgatactctgcttaccatttttttacttggtaaacgattaggtacagttgc 4582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 89854 - 89951
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttg 226  Q
    |||||||||||| ||| |||||| ||||||||||||||  |||| |||| ||||||||||||| || |||||  |||||||||||||||| ||||||||    
T  89854 aaaataagtaacgcgagttgtttagacgaaacgacaatacttgtagatatgatactctactta-cactttattacttggtaaacgatttgatacacttg 89951  T

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Target: scaffold0386 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 3)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 5978 - 6066
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||| ||||||||||||| | |  | ||||||||||||||||||||| || ||||| | ||| | |||||||||||||||||||||||    
T  5978 aggggattcgaagaatcctgaccgttacttacttttctacaaccaaaaacaagtaaattcgctctattgcaaacagataaaaattgcaa 6066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6588 - 6676
Alignment:
Q  1 agggggttcgaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||| ||||||||||||| | | |||||||||||| |  |||||||| || ||||| |  || | |||||||||||||||||||||||    
T  6588 aggggattcgaagaatcctgaccgctgcttacttttttgaaaccaaaaacaagtaaattcactctattgcaaacagataaaaattgcaa 6676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 6680 - 6764
Alignment:
Q  105 acttttatatcgtcaaacttacaaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctactt 189  Q
    ||||||||||| ||||||||| |||| || |||||  |||||||| |||||||   ||| ||  |||||||| ||||||||||||    
T  6680 acttttatatcatcaaacttataaaactaggtaactagaattgttcggacgaatgaacagtccctgtggatatgatactctactt 6764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 39786 - 39724
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||||||||||||| |||||||||| |||||| |||||| |||||||||||||||||||||||||    
T  39786 ctgcttacttttctgcaaccaaaac-aggtaa-cttgctctgttgcaaacagataaaaattgcaa 39724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 148 - 227
Target Start/End: Complemental strand, 39663 - 39584
Alignment:
Q  148 tttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||| |||| ||||||  |||||||||||| |||||||||||| |||||  |||||||||  |||| ||||||||||    
T  39663 tttggacaaaacaacaatcaatgtggatacgatgctctacttatcactttattacttggtaaataattttgtacacttgc 39584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 3851 - 3772
Alignment:
Q  10 gaagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    |||||||||||| | | |||||||||||| ||| |||||  |||||||||| ||||||||| | ||||||||||||||||    
T  3851 gaagaatcctaaccgcagcttacttttctgcaaacaaaaataggtaaactttctatgttgcgagcagataaaaattgcaa 3772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 78692 - 78594
Alignment:
Q  129 aaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||| || |||| || |  |||||||||||| || |||||||||| ||  |||||||| |||||  ||||||||||||| ||||||||||||    
T  78692 aaataagtaacgcggattggtttgttgaaacgacaatccttatggatacgatgcttaacttatcagtttattacttggtaaacgatatggtacacttgc 78594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 127 - 225
Target Start/End: Complemental strand, 30006 - 29909
Alignment:
Q  127 aaaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    |||||||||||||   |||||||||   || |||||||||| | ||||||| |||||||||||| || |||||  ||||||||||||||||||||||||    
T  30006 aaaaataagtaacgtaaattgtttgacagatacgacaatctctatggataccatactctactta-cactttattacttggtaaacgatttggtacactt 29909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 7422 - 7506
Alignment:
Q  138 acacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtaca 222  Q
    ||||||||||||| ||| ||||||||||  ||||  |||| ||||||||||||||| |||||  |||| |||||||||| |||||    
T  7422 acacgaattgtttagaccaaacgacaattcttgtaaatacaatactctacttatcactttattacttgataaacgatttagtaca 7506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 142 - 225
Target Start/End: Complemental strand, 1819 - 1736
Alignment:
Q  142 gaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacactt 225  Q
    |||||||||  || ||||||||||   ||||||||||||||||||||||||| ||| |  ||||||||||  ||||||||||||    
T  1819 gaattgtttacacaaaacgacaattcctgtggatacgatactctacttatcacttttttacttggtaaacagtttggtacactt 1736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 15494 - 15564
Alignment:
Q  157 aacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||||||||  ||||||||||||||||||| ||| | |||||  ||||||||| |||||| |||||||||    
T  15494 aacgacaatccatgtggatacgatactctacatattactttattacttggtaaatgatttgatacacttgc 15564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 69296 - 69218
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||||||||| | ||||||| |||||| ||   || | ||||||||||| || |||||||||||||||||||||||||    
T  69296 aagaatcctaaccgctgcttatttttctgcatgtaagaacaggtaaactttctctgttgcaaacagataaaaattgcaa 69218  T

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Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 69165 - 69082
Alignment:
Q  143 aattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||||||||||  ||  ||||||| ||||||||||||| ||| |||||||| |||||  |||||| || ||||||||||||||||    
T  69165 aattgtttggagaaagtgacaatccttgtggatacgattctcaacttatcactttattacttggt-aatgatttggtacacttgc 69082  T

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Target: scaffold0001; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 227
Target Start/End: Complemental strand, 81577 - 81487
Alignment:
Q  136 taacacgaattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    ||||| ||||| ||| |||||||| ||||||  ||||||||| |||| |||||||||| |||||   |||||||||||||| ||| ||||||    
T  81577 taacatgaattattttgacgaaaccacaatccatgtggatacaatac-ctacttatcactttattatttggtaaacgatttcgtaaacttgc 81487  T

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Target: scaffold0957 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 3236 - 3153
Alignment:
Q  143 aattgtttggacgaaacgacaatctttgtggatacgatactctacttatcaatttatatcttggtaaacgatttggtacacttgc 227  Q
    |||| |||||| |||| |||||||  ||||||||||||||||||| || || |||||  |||||||||| |||| ||||||||||    
T  3236 aattttttggatgaaatgacaatccgtgtggatacgatactctacata-cactttattacttggtaaacaattttgtacacttgc 3153  T

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Target: scaffold0957; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 3346 - 3283
Alignment:
Q  25 ctgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||||||||||||| |||||||| |||||||| ||||| | || |||||| |||||||||||||    
T  3346 ctgcttacttttctataaccaaaaacaggtaaa-ttgctctattacaaacaaataaaaattgcaa 3283  T

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Target: scaffold0351 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 277 - 379
Alignment:
Q  128 aaaataagtaacacgaattgtttggacgaaacgacaatctttgtggatacgatactctac-ttatcaatttat---atcttggtaaacgatttggtacac 223  Q
    |||||||||||||| |||||| |||| ||||||||||||  |||  ||| |||||||||| || ||| |||||   | ||||||||| ||||||||||||    
T  277 aaaataagtaacacaaattgtatggatgaaacgacaatcgatgtaaataggatactctactttgtcactttataaaaacttggtaaatgatttggtacac 376  T
Q  224 ttg 226  Q
    |||    
T  377 ttg 379  T

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Target: scaffold0351; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 5647 - 5724
Alignment:
Q  11 aagaatcctaaacactgcttacttttctacaaccaaaaccaggtaaacttgctatgttgcaaacagataaaaattgcaa 89  Q
    ||||||||||| |  || || ||||||||||||||||| |||||||  ||| | | |||||||||||||||||||||||    
T  5647 aagaatcctaaccgttgtttccttttctacaaccaaaaacaggtaat-ttggtctattgcaaacagataaaaattgcaa 5724  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 94695 - 94584
Alignment:
Q  56 aacttgctatgttgcaaacagataaaaattgcaaga-cttctaaccc-ttaacttttatatcgtcaaacttacaaaaataagtaacacgaattgtttgga 153  Q
    ||||||||  |||||||||||||||| |||||||||  ||||||||| ||| |||||||| | || |||||  |||||||  ||||  ||||| ||||||    
T  94695 aacttgctcagttgcaaacagataaatattgcaagattttctaaccctttatcttttatagcatc-aacttttaaaaatatctaacgagaattatttgga 94597  T
Q  154 cgaaacgacaatc 166  Q
    |||||||||||||    
T  94596 cgaaacgacaatc 94584  T

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