View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17654_high_10 (Length: 252)
Name: NF17654_high_10
Description: NF17654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17654_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 10 - 236
Target Start/End: Original strand, 43602599 - 43602825
Alignment:
| Q |
10 |
acatcatcaaccacagttcacaacaacaacagtaacatctttagaagccgttctacaaaagaaacacctttctcaaaactctcatgtccaactttctcac |
109 |
Q |
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| T |
43602599 |
acatcatcaaccacagttcacaacaacaacagtaacatctttagaagccgttctacaaaagaaacacctttctcaaaactctcatgtccaactttctcac |
43602698 |
T |
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| Q |
110 |
gcagtcttcaaaactctccagtttcatctcctcaacatcactattttcccactaagctctctgattttgagtccctacaaacaacttaccactgtgcctc |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43602699 |
gcagtcttcaaaactctccagtttcatctcctcaacatcactattttcccactaagctctctgattttgagtccctacaaacaacttaccactgtgcctc |
43602798 |
T |
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| Q |
210 |
ttctgtcctaagaaacgacggacaaat |
236 |
Q |
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||||||||||||||||||||||||||| |
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| T |
43602799 |
ttctgtcctaagaaacgacggacaaat |
43602825 |
T |
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