View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17657_high_29 (Length: 327)

Name: NF17657_high_29
Description: NF17657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17657_high_29
NF17657_high_29
[»] chr5 (23 HSPs)
chr5 (18-182)||(39458455-39458618)
chr5 (18-272)||(39480123-39480381)
chr5 (215-327)||(39458609-39458721)
chr5 (271-327)||(6865794-6865850)
chr5 (18-81)||(39486405-39486467)
chr5 (273-327)||(13734367-13734421)
chr5 (273-327)||(14206399-14206453)
chr5 (271-327)||(8725429-8725485)
chr5 (273-327)||(12203157-12203211)
chr5 (277-327)||(33567230-33567280)
chr5 (269-327)||(5386079-5386134)
chr5 (275-327)||(33910095-33910147)
chr5 (271-327)||(43153067-43153123)
chr5 (273-327)||(372727-372781)
chr5 (273-327)||(4434481-4434535)
chr5 (273-327)||(14923082-14923135)
chr5 (277-327)||(21210833-21210883)
chr5 (273-327)||(32732125-32732179)
chr5 (278-327)||(29227721-29227770)
chr5 (274-327)||(30334773-30334826)
chr5 (279-327)||(7080546-7080594)
chr5 (273-327)||(17574231-17574282)
chr5 (271-311)||(43057432-43057472)
[»] chr3 (23 HSPs)
chr3 (271-327)||(48490520-48490576)
chr3 (273-327)||(29846898-29846952)
chr3 (274-327)||(29057659-29057712)
chr3 (271-327)||(47683798-47683854)
chr3 (273-327)||(35368621-35368675)
chr3 (273-327)||(46952948-46953002)
chr3 (273-327)||(50745559-50745613)
chr3 (274-327)||(9719459-9719512)
chr3 (275-327)||(35554122-35554174)
chr3 (265-327)||(3484761-3484823)
chr3 (273-327)||(23906994-23907048)
chr3 (266-300)||(28300693-28300727)
chr3 (273-327)||(28700471-28700525)
chr3 (265-327)||(38957519-38957580)
chr3 (270-327)||(42718127-42718185)
chr3 (273-327)||(43169760-43169814)
chr3 (273-327)||(48117346-48117400)
chr3 (273-327)||(49361842-49361896)
chr3 (271-325)||(50876371-50876425)
chr3 (273-327)||(55361240-55361294)
chr3 (274-327)||(23868985-23869038)
chr3 (271-327)||(11056929-11056985)
chr3 (273-325)||(36318291-36318343)
[»] chr7 (27 HSPs)
chr7 (274-325)||(8459614-8459665)
chr7 (266-327)||(24380728-24380789)
chr7 (273-327)||(2469702-2469756)
chr7 (273-327)||(22330638-22330692)
chr7 (273-327)||(37351997-37352051)
chr7 (273-327)||(43213318-43213372)
chr7 (273-321)||(39875822-39875870)
chr7 (272-327)||(25887592-25887647)
chr7 (273-327)||(6822540-6822594)
chr7 (273-327)||(31785478-31785532)
chr7 (273-327)||(40108134-40108188)
chr7 (274-327)||(27866544-27866597)
chr7 (274-327)||(33465046-33465099)
chr7 (274-323)||(43444635-43444684)
chr7 (265-301)||(35592787-35592823)
chr7 (272-327)||(21839140-21839195)
chr7 (272-327)||(27570353-27570408)
chr7 (268-327)||(45420067-45420126)
chr7 (272-327)||(49142524-49142579)
chr7 (273-327)||(2323303-2323357)
chr7 (273-327)||(41985107-41985161)
chr7 (266-327)||(5905972-5906033)
chr7 (274-327)||(25272602-25272655)
chr7 (274-323)||(37848631-37848680)
chr7 (274-315)||(44196238-44196279)
chr7 (274-311)||(48314395-48314432)
chr7 (275-327)||(38547297-38547349)
[»] chr4 (39 HSPs)
chr4 (273-327)||(42490919-42490973)
chr4 (274-327)||(24310528-24310581)
chr4 (268-327)||(30973591-30973650)
chr4 (272-327)||(48494919-48494974)
chr4 (273-327)||(1868900-1868954)
chr4 (273-327)||(46173549-46173603)
chr4 (273-327)||(46686244-46686297)
chr4 (274-327)||(4974111-4974164)
chr4 (274-327)||(39241308-39241361)
chr4 (275-327)||(5386385-5386437)
chr4 (272-327)||(2109441-2109496)
chr4 (272-327)||(9827990-9828045)
chr4 (272-327)||(39605977-39606031)
chr4 (272-327)||(50980600-50980655)
chr4 (273-327)||(4511824-4511878)
chr4 (265-327)||(28657447-28657509)
chr4 (273-323)||(31413797-31413847)
chr4 (273-327)||(37022271-37022325)
chr4 (272-318)||(41119497-41119543)
chr4 (277-327)||(48326555-48326605)
chr4 (274-323)||(7795025-7795074)
chr4 (265-326)||(11997676-11997737)
chr4 (274-327)||(30778271-30778324)
chr4 (270-327)||(31657654-31657711)
chr4 (274-327)||(32365674-32365727)
chr4 (274-327)||(37731926-37731979)
chr4 (274-327)||(44133544-44133597)
chr4 (273-325)||(5234480-5234532)
chr4 (273-321)||(7146144-7146192)
chr4 (271-327)||(26440673-26440729)
chr4 (273-321)||(27384186-27384234)
chr4 (273-325)||(28480547-28480599)
chr4 (273-325)||(28481421-28481473)
chr4 (273-325)||(28482296-28482348)
chr4 (275-327)||(28676159-28676211)
chr4 (264-300)||(38133970-38134006)
chr4 (273-301)||(39844302-39844330)
chr4 (273-325)||(54036538-54036590)
chr4 (275-327)||(54848150-54848202)
[»] chr1 (36 HSPs)
chr1 (273-327)||(14983783-14983837)
chr1 (273-327)||(45272167-45272221)
chr1 (271-327)||(5975545-5975601)
chr1 (273-327)||(11121491-11121545)
chr1 (273-323)||(38913597-38913647)
chr1 (273-327)||(49453490-49453544)
chr1 (275-327)||(51571416-51571468)
chr1 (277-327)||(5477170-5477220)
chr1 (273-327)||(30414874-30414928)
chr1 (273-327)||(40596061-40596115)
chr1 (273-327)||(46903480-46903534)
chr1 (269-327)||(49241511-49241569)
chr1 (274-327)||(16252766-16252819)
chr1 (274-327)||(40139126-40139179)
chr1 (274-327)||(41507201-41507254)
chr1 (275-327)||(50460719-50460771)
chr1 (272-327)||(43757597-43757652)
chr1 (268-327)||(47386812-47386871)
chr1 (273-327)||(3826822-3826876)
chr1 (273-327)||(27687526-27687580)
chr1 (273-327)||(31480126-31480180)
chr1 (273-327)||(49589981-49590035)
chr1 (273-327)||(50797790-50797844)
chr1 (271-320)||(4857919-4857968)
chr1 (274-327)||(11597648-11597701)
chr1 (274-323)||(29264015-29264064)
chr1 (274-327)||(29293959-29294012)
chr1 (274-323)||(35030773-35030822)
chr1 (274-327)||(37690429-37690482)
chr1 (273-322)||(43612092-43612141)
chr1 (274-319)||(48872043-48872088)
chr1 (271-327)||(1603002-1603058)
chr1 (273-325)||(4154591-4154643)
chr1 (268-316)||(10385421-10385469)
chr1 (271-327)||(35335510-35335566)
chr1 (273-324)||(38303697-38303749)
[»] scaffold0155 (1 HSPs)
scaffold0155 (273-327)||(3278-3332)
[»] scaffold0054 (1 HSPs)
scaffold0054 (273-327)||(31607-31661)
[»] chr8 (35 HSPs)
chr8 (273-327)||(5740792-5740846)
chr8 (273-327)||(7325725-7325779)
chr8 (273-327)||(37392135-37392189)
chr8 (274-327)||(1370292-1370345)
chr8 (274-327)||(32777896-32777949)
chr8 (272-327)||(5502369-5502424)
chr8 (273-327)||(324101-324155)
chr8 (274-320)||(9047084-9047130)
chr8 (273-327)||(13924021-13924075)
chr8 (273-327)||(18538385-18538439)
chr8 (274-327)||(1796496-1796549)
chr8 (274-327)||(6243045-6243098)
chr8 (274-327)||(41776186-41776239)
chr8 (274-327)||(44103776-44103829)
chr8 (274-327)||(45081398-45081451)
chr8 (275-327)||(39211054-39211106)
chr8 (272-327)||(7010683-7010738)
chr8 (273-324)||(14233654-14233705)
chr8 (274-325)||(36675336-36675387)
chr8 (272-327)||(45405826-45405881)
chr8 (277-323)||(157070-157116)
chr8 (273-311)||(3155842-3155880)
chr8 (273-327)||(25430656-25430710)
chr8 (273-327)||(29107994-29108048)
chr8 (274-327)||(38174240-38174294)
chr8 (273-327)||(38939196-38939250)
chr8 (277-327)||(42768129-42768179)
chr8 (273-311)||(43066628-43066666)
chr8 (274-311)||(21526315-21526352)
chr8 (275-324)||(32020475-32020524)
chr8 (274-327)||(37471654-37471707)
chr8 (274-327)||(37524435-37524488)
chr8 (266-311)||(40102015-40102060)
chr8 (275-315)||(895935-895975)
chr8 (257-301)||(26442696-26442740)
[»] chr6 (16 HSPs)
chr6 (273-327)||(31517187-31517241)
chr6 (273-325)||(12427236-12427288)
chr6 (272-327)||(2241825-2241880)
chr6 (273-327)||(1196057-1196111)
chr6 (273-327)||(12441537-12441591)
chr6 (274-327)||(32644623-32644676)
chr6 (273-324)||(2165310-2165361)
chr6 (273-324)||(2176943-2176994)
chr6 (273-327)||(17442832-17442886)
chr6 (273-327)||(25567497-25567551)
chr6 (273-323)||(32149499-32149549)
chr6 (274-327)||(9395344-9395397)
chr6 (274-323)||(16121163-16121212)
chr6 (274-327)||(32135438-32135491)
chr6 (273-325)||(6158789-6158841)
chr6 (273-321)||(16328714-16328762)
[»] chr2 (27 HSPs)
chr2 (273-327)||(42081047-42081101)
chr2 (270-325)||(10550468-10550523)
chr2 (273-327)||(8482239-8482293)
chr2 (277-323)||(44422981-44423027)
chr2 (274-327)||(7121390-7121443)
chr2 (270-327)||(22296136-22296193)
chr2 (274-327)||(24727426-24727479)
chr2 (273-326)||(28013966-28014019)
chr2 (274-327)||(37737984-37738036)
chr2 (274-327)||(38600825-38600878)
chr2 (274-327)||(45202139-45202192)
chr2 (271-327)||(37966364-37966420)
chr2 (271-327)||(40496358-40496414)
chr2 (264-327)||(27538923-27538986)
chr2 (268-327)||(29795441-29795500)
chr2 (273-327)||(4138192-4138246)
chr2 (273-327)||(5191701-5191755)
chr2 (273-327)||(19695698-19695752)
chr2 (273-327)||(40700206-40700260)
chr2 (274-327)||(8757555-8757608)
chr2 (277-326)||(11828828-11828877)
chr2 (274-327)||(25801820-25801873)
chr2 (274-327)||(43725216-43725269)
chr2 (270-323)||(44058727-44058780)
chr2 (271-311)||(4036910-4036950)
chr2 (271-327)||(15141470-15141526)
chr2 (271-311)||(43057061-43057101)
[»] scaffold0286 (1 HSPs)
scaffold0286 (273-324)||(17048-17099)
[»] scaffold0194 (1 HSPs)
scaffold0194 (273-327)||(29779-29833)
[»] scaffold0019 (1 HSPs)
scaffold0019 (277-323)||(71599-71645)
[»] scaffold0504 (1 HSPs)
scaffold0504 (275-323)||(11159-11207)
[»] scaffold0115 (1 HSPs)
scaffold0115 (271-311)||(15222-15262)


Alignment Details
Target: chr5 (Bit Score: 133; Significance: 4e-69; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 39458455 - 39458618
Alignment:
Q  18 gaaactagatgaccgacaccaggtgaaggaataatcacccacttctgctttcttcctcctggatatgcacttactcagagcgagtgactgtgttctcaat 117  Q
    |||||||||||||| |||||||||||||  ||||||||| ||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||    
T  39458455 gaaactagatgaccaacaccaggtgaagagataatcacc-acttctgctttcttcatcctggatatgcacttactcagtgtgagtgactgtgttctcaat 39458553  T
Q  118 tgttctttgatgtcctttttgttatatagaaatagaaatagaaatagtgtgtagacaattattag 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39458554 tgttctttgatgtcctttttgttatatagaaatagaaatagaaatagtgtgtagacaattattag 39458618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 18 - 272
Target Start/End: Complemental strand, 39480381 - 39480123
Alignment:
Q  18 gaaactagatgaccgacaccaggtgaaggaataatcacccacttctgctttcttcctcctggatatgcacttactcagagcgagtgactgtgttctcaat 117  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||| | ||||||||||||| || ||    
T  39480381 gaaactagatgaccaacaccaggtgaagggataatcacc-acttctgctttcttcatcctggatatgcacttactcagtgtgagtgactgtgttttctat 39480283  T
Q  118 tgttctttgatg-tcctttttgttatatagaaatagaaatagaaatagtgtgtagacaatt----attagtatgattattggtgtttgatgtatgtccct 212  Q
    |||||||||||| | |||||||||| | ||||||| |||||         |||||| ||||    |||||||||||||||||||||| ||||||||||||    
T  39480282 tgttctttgatgtttctttttgttacacagaaatataaata--------atgtagagaattattaattagtatgattattggtgtttaatgtatgtccct 39480191  T
Q  213 gtca--------attattagaagtatacatggtttacattgcattactttgttttttcaattattatt 272  Q
    || |        | |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39480190 gtgaaacagtacactattagaaatatacatggtttacattgcattactttgttttttcaattattatt 39480123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 215 - 327
Target Start/End: Original strand, 39458609 - 39458721
Alignment:
Q  215 caattattagaagtatacatggtttacattgcattactttgttttttcaattattattagagaaatgatatctgtacaaccacttttcaacaactttctc 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||    
T  39458609 caattattagaagtatacatggtttacattgcattactttgttttttcaattattattagagaaatgatatctgtacaaccagtttttgacaactttctc 39458708  T
Q  315 tctcatactcaca 327  Q
    |||||||||||||    
T  39458709 tctcatactcaca 39458721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 6865850 - 6865794
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||||| ||||||||||||||   ||||||||||||||||||||||||    
T  6865850 ttagagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcaca 6865794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 39486467 - 39486405
Alignment:
Q  18 gaaactagatgaccgacaccaggtgaaggaataatcacccacttctgctttcttcctcctggat 81  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||||||||||||| || |||||    
T  39486467 gaaactagatgaccaacaccaggtgaagggataatca-ccacttctgctttcttcatcttggat 39486405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 13734421 - 13734367
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||||||||||   ||||||||||||||||||||||||    
T  13734421 agagaaatgatatttgtacaaccactttatgacaactttctctctcatactcaca 13734367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 14206399 - 14206453
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| ||||  ||||||||||||||||||||||||    
T  14206399 agagaaatgatatttgtacaaccattttttgacaactttctctctcatactcaca 14206453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 8725485 - 8725429
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||| |||| ||||||||||||||   ||||||||||||||||||||||||    
T  8725485 ttagagaaattatatttgtacaaccactttattacaactttctctctcatactcaca 8725429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 12203157 - 12203211
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| ||||  ||||||||||||||||| ||||||    
T  12203157 agagaaatgatatttgtacaaccatttttgtacaactttctctctcatgctcaca 12203211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 33567280 - 33567230
Alignment:
Q  277 aaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||| ||||||||||||||   ||||||||||||||||||||||||    
T  33567280 aaatgatatttgtacaaccactttgtgacaactttctctctcatactcaca 33567230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 327
Target Start/End: Original strand, 5386079 - 5386134
Alignment:
Q  269 tattagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||| |||||||||||| ||||||||   |||| |||||||||||||||||||||||||    
T  5386079 tatttgagaaatgatatttgtacaac---ttttaaacaactttctctctcatactcaca 5386134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 33910147 - 33910095
Alignment:
Q  275 agaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||| ||| |||||| ||||  ||||||||||||||||||||||||    
T  33910147 agaaatgatatttgttcaaccattttttgacaactttctctctcatactcaca 33910095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 43153123 - 43153067
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||||| |||||||| | ||||  |||||||||||||||||| |||||    
T  43153123 ttagagaaatgatatttgtacaacaatttttgtacaactttctctctcatattcaca 43153067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 372781 - 372727
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||| | |||||||||| |||   ||||||||||||||||||||||||    
T  372781 agagaaatgatttttgtacaaccattttgtgacaactttctctctcatactcaca 372727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 4434481 - 4434535
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| ||||  |||| ||| |||||||||||||||    
T  4434481 agagaaatgatatttgtacaaccattttttgacaattttttctctcatactcaca 4434535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 14923082 - 14923135
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| || ||||||| |||| | |||||||||||||||||||||||    
T  14923082 agagaaatgatatttgaacaaccatttttta-caactttctctctcatactcaca 14923135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 21210833 - 21210883
Alignment:
Q  277 aaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||| || ||||||||||||  ||||||||||||||||||| ||||    
T  21210833 aaatgatatttgaacaaccactttttgacaactttctctctcatacacaca 21210883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 32732179 - 32732125
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||| |||| ||||||| || ||||  ||||||||||||||||||||||||    
T  32732179 agagaaattatatttgtacaatcatttttgtacaactttctctctcatactcaca 32732125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 327
Target Start/End: Original strand, 29227721 - 29227770
Alignment:
Q  278 aatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||| |||||||| |||||   ||||||||||||||||||||||||    
T  29227721 aatgatatttgtacaactactttgtgacaactttctctctcatactcaca 29227770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 30334826 - 30334773
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| ||||||||||||||   |||| ||||||| |||||||||||    
T  30334826 gagaaatgatatttgtacaaccactttatgacaattttctctttcatactcaca 30334773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 7080546 - 7080594
Alignment:
Q  279 atgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||| ||||||| || ||||  ||||||||||||||||||||||||    
T  7080546 atgatatttgtacaatcatttttgtacaactttctctctcatactcaca 7080594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 17574282 - 17574231
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||| |||||||||||||   ||||  ||||||||||||||||||||||||    
T  17574282 agagaaataatatctgtacaac---ttttgtacaactttctctctcatactcaca 17574231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 43057432 - 43057472
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaacttt 311  Q
    ||||||||||||||| |||||||||||||||  ||||||||    
T  43057432 ttagagaaatgatatttgtacaaccactttttgacaacttt 43057472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 48490576 - 48490520
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  48490576 ttagagaaatgatatttgtacaaccacttttgtacaactttctctctcatactcaca 48490520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 29846952 - 29846898
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| ||||  ||||||||||||||||||||||||    
T  29846952 agagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcaca 29846898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 29057659 - 29057712
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||||| ||||  ||||||||||||||||||||||||    
T  29057659 gagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcaca 29057712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 47683798 - 47683854
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||||| |||||||||| |||   ||||||||||||||||||||||||    
T  47683798 ttagagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcaca 47683854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 35368621 - 35368675
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||| | ||||  ||||||||||||||||||||||||    
T  35368621 agagaaatgatatttgtacaactatttttgtacaactttctctctcatactcaca 35368675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 46952948 - 46953002
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| ||||  | ||||||||||||||||||||||    
T  46952948 agagaaatgatatttgtacaaccattttttgataactttctctctcatactcaca 46953002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 50745559 - 50745613
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||| || ||||  ||||||||||||||||||||||||    
T  50745559 agagaaatgatatttgtacaatcatttttgtacaactttctctctcatactcaca 50745613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 9719512 - 9719459
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||||||||||  |||| |||| ||||||||||||||    
T  9719512 gagaaatgatatttgtacaaccactttttgacaattttccctctcatactcaca 9719459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 35554174 - 35554122
Alignment:
Q  275 agaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||| |||| || |||||||  ||||||||||||||||||||||||    
T  35554174 agaaatgatatttgtataatcactttttgacaactttctctctcatactcaca 35554122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 3484761 - 3484823
Alignment:
Q  265 ttattattagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||| || |||||||||||| ||| |||||| |||   ||||||||||||||||||||||||    
T  3484761 ttatttttggagaaatgatatttgtccaaccattttattacaactttctctctcatactcaca 3484823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 23907048 - 23906994
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| | |   ||||||||||||||||||||||||    
T  23907048 agagaaatgatatttgtacaaccattatgttacaactttctctctcatactcaca 23906994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 300
Target Start/End: Complemental strand, 28300727 - 28300693
Alignment:
Q  266 tattattagagaaatgatatctgtacaaccacttt 300  Q
    |||||||||||||||||||| ||||||||||||||    
T  28300727 tattattagagaaatgatatttgtacaaccacttt 28300693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 28700471 - 28700525
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| || ||||||| ||||  |||||||| |||||||||||||||    
T  28700471 agagaaatgatatttgaacaaccattttttgacaactttatctctcatactcaca 28700525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 38957580 - 38957519
Alignment:
Q  265 ttattattagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||| ||||||||||||||| |||||||| | ||||  |||||||| |||||||||||||||    
T  38957580 ttatttttagagaaatgatatttgtacaacta-tttttgacaactttttctctcatactcaca 38957519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 327
Target Start/End: Original strand, 42718127 - 42718185
Alignment:
Q  270 attagagaaatgatatctgtacaaccacttt-tcaacaactttctctctcatactcaca 327  Q
    |||| ||||||||||| |||||||||| ||| | ||||||||||||||||||| |||||    
T  42718127 attaaagaaatgatatttgtacaaccattttattaacaactttctctctcatattcaca 42718185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 43169814 - 43169760
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| |||   |||||||| |||||||||||||||    
T  43169814 agagaaatgatatttgtacaaccattttgtgacaactttttctctcatactcaca 43169760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 48117346 - 48117400
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| | |||||||| ||||  |||||||||||| |||||||||||    
T  48117346 agagaaatgatatttatacaaccatttttgtacaactttctctttcatactcaca 48117400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 49361896 - 49361842
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||| || ||||  |||||||| |||||||||||||||    
T  49361896 agagaaatgatatttgtacaatcatttttgtacaactttttctctcatactcaca 49361842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 325
Target Start/End: Complemental strand, 50876425 - 50876371
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactca 325  Q
    ||||||||||||||| |||||||| | ||||  |||||||||||| |||||||||    
T  50876425 ttagagaaatgatatttgtacaacaattttttgacaactttctctatcatactca 50876371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 55361294 - 55361240
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| || |  |||||||||||||| |||||||||    
T  55361294 agagaaatgatatttgtacaaccatttcttgacaactttctctcttatactcaca 55361240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 23869038 - 23868985
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||||| |||  ||||| ||||||| |||||||||||    
T  23869038 gagaaatgatatttgtacaaccattttataacaattttctctttcatactcaca 23868985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 11056985 - 11056929
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||||| |||||||| | ||||  |||||||||||| ||||| |||||    
T  11056985 ttagagaaatgatatttgtacaacaattttttgacaactttctctttcatattcaca 11056929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 325
Target Start/End: Complemental strand, 36318343 - 36318291
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactca 325  Q
    ||||||||||||| |||| | ||||||||  |||| |||||||||||||||||    
T  36318343 agagaaatgatatttgtatatccactttttgacaattttctctctcatactca 36318291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 274 - 325
Target Start/End: Original strand, 8459614 - 8459665
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactca 325  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  8459614 gagaaatgatatttgtacaaccactttttaacaactttctctctcatactca 8459665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 24380789 - 24380728
Alignment:
Q  266 tattattagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||||||||| |||||||||| ||||  |||||||||| |||||||||||||    
T  24380789 tattattagagaaatgatatttgtacaaccatttttatacaactttctttctcatactcaca 24380728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 2469702 - 2469756
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||||||||||   ||||||||||||||||||||||||    
T  2469702 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcaca 2469756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 22330692 - 22330638
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||||||||||   ||||||||||||||||||||||||    
T  22330692 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcaca 22330638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 37352051 - 37351997
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||||||||||   ||||||||||||||||||||||||    
T  37352051 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcaca 37351997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 43213318 - 43213372
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||||||||||  ||||| |||||||||||||||||||    
T  43213318 agagaaatgatatttgtacaaccactttctaacaattttctctctcatactcaca 43213372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 39875870 - 39875822
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcata 321  Q
    ||||||||||||| | ||||||||||||| |||||||||||||||||||    
T  39875870 agagaaatgatatttatacaaccactttttaacaactttctctctcata 39875822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 25887592 - 25887647
Alignment:
Q  272 tagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||| |||||| |||||||   ||||||||||||||||||||||||    
T  25887592 tagagaaatgatatttgtacatccactttgtgacaactttctctctcatactcaca 25887647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 6822594 - 6822540
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| |||  ||||||||| |||||||||||||||    
T  6822594 agagaaatgatatttgtacaaccattttctaacaactttttctctcatactcaca 6822540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 31785532 - 31785478
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||||||||||   | ||||||||||||||||||||||    
T  31785532 agagaaatgatatttgtacaaccactttatgaaaactttctctctcatactcaca 31785478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 40108134 - 40108188
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||| | |||||||||| ||||  ||||||||||||||||||||||||    
T  40108134 agagaaatgatgtttgtacaaccatttttatacaactttctctctcatactcaca 40108188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 27866597 - 27866544
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||||| ||||  |||||||| |||||||||||||||    
T  27866597 gagaaatgatatttgtacaaccatttttgtacaactttatctctcatactcaca 27866544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 33465099 - 33465046
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||||| ||||  |||| |||||||||||||||||||    
T  33465099 gagaaatgatatttgtacaaccatttttgtacaattttctctctcatactcaca 33465046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 323
Target Start/End: Original strand, 43444635 - 43444684
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatact 323  Q
    |||||||||||| ||||||||||||||   ||||||||||||||||||||    
T  43444635 gagaaatgatatttgtacaaccactttatgacaactttctctctcatact 43444684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 35592823 - 35592787
Alignment:
Q  265 ttattattagagaaatgatatctgtacaaccactttt 301  Q
    |||||||||||||||||||||||| ||||||||||||    
T  35592823 ttattattagagaaatgatatctgcacaaccactttt 35592787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 327
Target Start/End: Complemental strand, 21839195 - 21839140
Alignment:
Q  272 tagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||| ||||||||| | |||||||||||||  |||||||| |||||||||||||||    
T  21839195 tagaaaaatgatatttatacaaccactttttgacaactttatctctcatactcaca 21839140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 27570353 - 27570408
Alignment:
Q  272 tagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||| || ||||| | |||| || ||||||||||||||||||||||    
T  27570353 tagagaaatgatatttgaacaactattttttaataactttctctctcatactcaca 27570408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 327
Target Start/End: Complemental strand, 45420126 - 45420067
Alignment:
Q  268 ttattagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||||||| || ||||| | ||||  |||||||||||||||||| |||||    
T  45420126 ttattagagaaatgatatttgaacaactattttttgacaactttctctctcatattcaca 45420067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 327
Target Start/End: Complemental strand, 49142579 - 49142524
Alignment:
Q  272 tagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||| |||||||||| ||||  | || |||||||||||||||||||    
T  49142579 tagagaaatgatatttgtacaaccatttttgtaaaattttctctctcatactcaca 49142524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 2323303 - 2323357
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||| | |||   ||||||||||||||||||||||||    
T  2323303 agagaaatgatatttgtacaacaattttatgacaactttctctctcatactcaca 2323357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 41985161 - 41985107
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||| || |||   ||||||||||||||||||||||||    
T  41985161 agagaaatgatatttgtacaatcaatttgtgacaactttctctctcatactcaca 41985107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 5906033 - 5905972
Alignment:
Q  266 tattattagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||| ||||||||||||| ||||||| || |||   | ||||||||||||||||||||||    
T  5906033 tattataagagaaatgatatttgtacaatcattttggtataactttctctctcatactcaca 5905972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 25272602 - 25272655
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||||| ||||  |||||||||||||  |||||||||    
T  25272602 gagaaatgatatttgtacaaccatttttgtacaactttctctcatatactcaca 25272655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 37848680 - 37848631
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatact 323  Q
    |||||||||||| ||||||| || ||||  ||||||||||||||||||||    
T  37848680 gagaaatgatatttgtacaatcatttttgtacaactttctctctcatact 37848631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 44196279 - 44196238
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctct 315  Q
    |||||||||||| |||||| |||||||| |||||||||||||    
T  44196279 gagaaatgatatatgtacatccactttttaacaactttctct 44196238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Complemental strand, 48314432 - 48314395
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaacttt 311  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  48314432 gagaaatgatatttgtacaaccactttttaacaacttt 48314395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 38547349 - 38547297
Alignment:
Q  275 agaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||| |||||||| | ||||  |||||||||| |||||||||||||    
T  38547349 agaaatgatatttgtacaactattttttgacaactttctttctcatactcaca 38547297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 42490919 - 42490973
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  42490919 agagaaatgatatttgtacaaccactttttgacaactttctctctcatactcaca 42490973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 24310581 - 24310528
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||||| ||||  ||||||||||||||||||||||||    
T  24310581 gagaaatgatatttgtacaaccatttttgtacaactttctctctcatactcaca 24310528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 268 - 327
Target Start/End: Original strand, 30973591 - 30973650
Alignment:
Q  268 ttattagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||||||| ||||||||||||||   |||||||| ||| |||||||||||    
T  30973591 ttattagagaaatgatatttgtacaaccactttatgacaactttttctttcatactcaca 30973650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 327
Target Start/End: Complemental strand, 48494974 - 48494919
Alignment:
Q  272 tagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||| || |||||||||||| ||||||||| |||||||||| ||||    
T  48494974 tagagaaatgatatttgaacaaccactttttaacaactttatctctcatacacaca 48494919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 1868954 - 1868900
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| ||||  |||||||||| |||||||||||||    
T  1868954 agagaaatgatatttgtacaaccatttttgtacaactttctatctcatactcaca 1868900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 46173549 - 46173603
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||||||||||   ||||||||||||||| ||||||||    
T  46173549 agagaaatgatatttgtacaaccactttgtgacaactttctctctcgtactcaca 46173603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 46686244 - 46686297
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| ||||  ||||||||||||||||||||||||    
T  46686244 agagaaatgatatttgtacaacca-ttttgtacaactttctctctcatactcaca 46686297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 4974111 - 4974164
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||| | |||| |||||||||||||||||||| ||||    
T  4974111 gagaaatgatatttgtacaactattttttaacaactttctctctcatacccaca 4974164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 39241361 - 39241308
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||||| |||   ||||||||||||||||||||||||    
T  39241361 gagaaatgatatttgtacaaccaatttgtgacaactttctctctcatactcaca 39241308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 5386385 - 5386437
Alignment:
Q  275 agaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||| || ||||||| ||||  ||||||||||||||||||||||||    
T  5386385 agaaatgatatttgaacaaccattttttgacaactttctctctcatactcaca 5386437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 2109441 - 2109496
Alignment:
Q  272 tagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||| ||||||||||  |||  |||||||||||| |||||||||||    
T  2109441 tagagaaatgatatttgtacaaccatcttttgacaactttctctttcatactcaca 2109496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 327
Target Start/End: Complemental strand, 9828045 - 9827990
Alignment:
Q  272 tagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||| |||||||||| |||   |||||||||||||||| |||||||    
T  9828045 tagagaaatgatatttgtacaaccattttagtacaactttctctctcacactcaca 9827990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 39605977 - 39606031
Alignment:
Q  272 tagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||| || ||||||| |||| | |||||||||||||||||||||||    
T  39605977 tagagaaatgatatatgaacaaccatttttga-caactttctctctcatactcaca 39606031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 50980600 - 50980655
Alignment:
Q  272 tagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||| ||||||| || |||  |||||| ||||||||||||||||||    
T  50980600 tagagaaatgatatttgtacaatcattttctaacaaccttctctctcatactcaca 50980655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 4511824 - 4511878
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||| ||||| |||   ||||||||||||||||||||||||    
T  4511824 agagaaatgatatttgtataaccattttatgacaactttctctctcatactcaca 4511878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 327
Target Start/End: Complemental strand, 28657509 - 28657447
Alignment:
Q  265 ttattattagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||| ||||||||||||| || ||| ||| |||   ||||||||||||||||||||||||    
T  28657509 ttattataagagaaatgatatttgaacatccattttgtgacaactttctctctcatactcaca 28657447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 31413847 - 31413797
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatact 323  Q
    ||||||||||||| |||||||| | ||||  ||||||||||||||||||||    
T  31413847 agagaaatgatatttgtacaactatttttgtacaactttctctctcatact 31413797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 37022271 - 37022325
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| |||   |||||||| |||||||||||||||    
T  37022271 agagaaatgatatttgtacaaccattttgatacaactttatctctcatactcaca 37022325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 318
Target Start/End: Complemental strand, 41119543 - 41119497
Alignment:
Q  272 tagagaaatgatatctgtacaaccacttttcaacaactttctctctc 318  Q
    |||||||||||||| ||||||||||||||   |||||||||||||||    
T  41119543 tagagaaatgatatttgtacaaccactttgtgacaactttctctctc 41119497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 48326555 - 48326605
Alignment:
Q  277 aaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||| ||||||||||||||   |||||||| |||||||||||||||    
T  48326555 aaatgatatttgtacaaccactttgtgacaactttttctctcatactcaca 48326605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 323
Target Start/End: Original strand, 7795025 - 7795074
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatact 323  Q
    |||||||||||| |||||||||| ||||  |||||||||| |||||||||    
T  7795025 gagaaatgatatttgtacaaccatttttgtacaactttctttctcatact 7795074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 11997676 - 11997737
Alignment:
Q  265 ttattattagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcac 326  Q
    |||||||| |||||||||||| ||||||||||||||   |||||||| | | ||||||||||    
T  11997676 ttattatttgagaaatgatatttgtacaaccactttgtgacaactttatttttcatactcac 11997737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 30778324 - 30778271
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||| ||| |||   ||||||||||||||||||||||||    
T  30778324 gagaaatgatatttgtacagccaatttgtgacaactttctctctcatactcaca 30778271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 327
Target Start/End: Original strand, 31657654 - 31657711
Alignment:
Q  270 attagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||||| || ||| ||| |||   ||||||||||||||||||||||||    
T  31657654 attagagaaatgatatttgaacatccattttgtgacaactttctctctcatactcaca 31657711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 32365727 - 32365674
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||||| |||   |||||||||||||||||| |||||    
T  32365727 gagaaatgatatttgtacaaccattttgtgacaactttctctctcatattcaca 32365674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 37731926 - 37731979
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| ||||||| || |||   ||||||||||||||||||||||||    
T  37731926 gagaaatgatatttgtacaatcattttggtacaactttctctctcatactcaca 37731979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 44133544 - 44133597
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||| ||||||||  |||| ||| |||||||||||||||    
T  44133544 gagaaatgatatatgtacatccacttttttacaattttttctctcatactcaca 44133597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 325
Target Start/End: Complemental strand, 5234532 - 5234480
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactca 325  Q
    ||||||||||||| ||||||| ||||||   | ||||||||||||||||||||    
T  5234532 agagaaatgatatttgtacaatcactttgtgataactttctctctcatactca 5234480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 7146192 - 7146144
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcata 321  Q
    ||||||||||||| || ||||||| |||| ||||||||| |||||||||    
T  7146192 agagaaatgatatttgaacaaccatttttaaacaactttttctctcata 7146144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 26440673 - 26440729
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||||| ||||||||||||||   |||| ||| |||| ||||||||||    
T  26440673 ttagagaaatgatatttgtacaaccactttgtgacaattttatctcccatactcaca 26440729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 27384186 - 27384234
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcata 321  Q
    ||||||||||||| |||||||||| |||   ||||||||||||||||||    
T  27384186 agagaaatgatatttgtacaaccattttattacaactttctctctcata 27384234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 325
Target Start/End: Complemental strand, 28480599 - 28480547
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactca 325  Q
    ||||||||||||| | ||||||||||||   |||||||||||| |||||||||    
T  28480599 agagaaatgatatttatacaaccactttatgacaactttctctgtcatactca 28480547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 325
Target Start/End: Complemental strand, 28481473 - 28481421
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactca 325  Q
    ||||||||||||| | ||||||||||||   |||||||||||| |||||||||    
T  28481473 agagaaatgatatttatacaaccactttatgacaactttctctgtcatactca 28481421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 325
Target Start/End: Complemental strand, 28482348 - 28482296
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactca 325  Q
    ||||||||||||| | ||||||||||||   |||||||||||| |||||||||    
T  28482348 agagaaatgatatttatacaaccactttatgacaactttctctgtcatactca 28482296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 28676211 - 28676159
Alignment:
Q  275 agaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||| |||||||||| |||   |||||||||||| |||||||||||    
T  28676211 agaaatgatatttgtacaaccattttgtgacaactttctctttcatactcaca 28676159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 38133970 - 38134006
Alignment:
Q  264 attattattagagaaatgatatctgtacaaccacttt 300  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  38133970 attattattagagaaattatatttgtacaaccacttt 38134006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 301
Target Start/End: Complemental strand, 39844330 - 39844302
Alignment:
Q  273 agagaaatgatatctgtacaaccactttt 301  Q
    |||||||||||||||||||||||||||||    
T  39844330 agagaaatgatatctgtacaaccactttt 39844302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 325
Target Start/End: Complemental strand, 54036590 - 54036538
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactca 325  Q
    ||||||||||||| |||||||||| |||   |||||||| |||||||||||||    
T  54036590 agagaaatgatatttgtacaaccattttgtgacaactttatctctcatactca 54036538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 54848150 - 54848202
Alignment:
Q  275 agaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||| |||||||||| ||||  ||||| |||||||||||| |||||    
T  54848150 agaaatgatatttgtacaaccatttttgtacaaccttctctctcatattcaca 54848202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 14983783 - 14983837
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||    
T  14983783 agagaaatgatatttgtacaaccactttttaacaactttctctctcatattcaca 14983837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 45272221 - 45272167
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  45272221 agagaaatgatatttgtacaaccactttttgacaactttctctctcatactcaca 45272167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 5975545 - 5975601
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||||| |||||| ||||||||  ||||||||||||||||||||||||    
T  5975545 ttagagaaatgatatatgtacatccactttttgacaactttctctctcatactcaca 5975601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 11121491 - 11121545
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||| ||||||  ||||||||||||||||||||||||    
T  11121491 agagaaatgatatttgtacaacaacttttgtacaactttctctctcatactcaca 11121545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 38913597 - 38913647
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatact 323  Q
    ||||||||||||||||||||||||||||   ||||||||||||||||||||    
T  38913597 agagaaatgatatctgtacaaccactttctcacaactttctctctcatact 38913647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 49453490 - 49453544
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||||||||||   ||||||||||||||||||||||||    
T  49453490 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcaca 49453544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 51571416 - 51571468
Alignment:
Q  275 agaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||| |||||||||||||||  |||||||||||||||||| |||||    
T  51571416 agaaatgatatttgtacaaccactttttgacaactttctctctcatattcaca 51571468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 5477220 - 5477170
Alignment:
Q  277 aaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||| ||||||||||||||   ||||||||||||||||||||||||    
T  5477220 aaatgatatttgtacaaccactttgtgacaactttctctctcatactcaca 5477170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 30414874 - 30414928
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| ||||  ||||| ||||||||||||||||||    
T  30414874 agagaaatgatatttgtacaaccatttttgtacaaccttctctctcatactcaca 30414928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 40596115 - 40596061
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| |||   ||||||||||||||||||||||||    
T  40596115 agagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcaca 40596061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 46903480 - 46903534
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| |||   ||||||||||||||||||||||||    
T  46903480 agagaaatgatatttgtacaaccattttgatacaactttctctctcatactcaca 46903534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 269 - 327
Target Start/End: Complemental strand, 49241569 - 49241511
Alignment:
Q  269 tattagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||||||| || ||| |||||||   ||||||||||||||||||||||||    
T  49241569 tattagagaaatgatatttgaacatccactttgtgacaactttctctctcatactcaca 49241511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 16252819 - 16252766
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||||| ||||  |||||||||||| |||||||||||    
T  16252819 gagaaatgatatttgtacaaccatttttgtacaactttctctttcatactcaca 16252766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 40139126 - 40139179
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||||| |||   ||||||||||||||||||||||||    
T  40139126 gagaaatgatatttgtacaaccattttatgacaactttctctctcatactcaca 40139179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 41507254 - 41507201
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||||| |||   ||||||||||||||||||||||||    
T  41507254 gagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcaca 41507201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 50460771 - 50460719
Alignment:
Q  275 agaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||| |||||||||| ||||  |||||||||| |||||||||||||    
T  50460771 agaaatgatatttgtacaaccatttttgtacaactttctttctcatactcaca 50460719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 43757597 - 43757652
Alignment:
Q  272 tagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||| |||||||||| |||   |||||||||||| |||||||||||    
T  43757597 tagagaaatgatatttgtacaaccattttgatacaactttctctttcatactcaca 43757652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 327
Target Start/End: Complemental strand, 47386871 - 47386812
Alignment:
Q  268 ttattagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||||||| |||||||||| |||  ||||||||| ||||| |||| ||||    
T  47386871 ttattagagaaatgatatttgtacaaccattttataacaactttatctcttatacacaca 47386812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 3826876 - 3826822
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||| | |||| ||||||||| ||||||||| |||||    
T  3826876 agagaaatgatatttgtacaactaatttttaacaactttatctctcatattcaca 3826822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 27687580 - 27687526
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| |||   |||||||| |||||||||||||||    
T  27687580 agagaaatgatatttgtacaaccattttgtgacaactttatctctcatactcaca 27687526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 31480180 - 31480126
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||| |||||||   | ||||||||||||||||||||||    
T  31480180 agagaaatgatatatgtacatccactttgtgataactttctctctcatactcaca 31480126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 49590035 - 49589981
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||||||||||   |||||||| | |||||||||||||    
T  49590035 agagaaatgatatttgtacaaccactttattacaactttttatctcatactcaca 49589981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 50797790 - 50797844
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||| || |||   ||||||||||||||||||||||||    
T  50797790 agagaaatgatatttgtacaatcattttgtgacaactttctctctcatactcaca 50797844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 4857919 - 4857968
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaactttctctctcat 320  Q
    ||||||||||||||| || |||| |||||||  |||||||||||||||||    
T  4857919 ttagagaaatgatatttgaacaatcactttttgacaactttctctctcat 4857968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 11597648 - 11597701
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||||||||||||| |||   ||||||||||||  ||||||||||    
T  11597648 gagaaatgatatctgtacaaccaatttgtgacaactttctctgccatactcaca 11597701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 323
Target Start/End: Original strand, 29264015 - 29264064
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatact 323  Q
    |||||||||||| ||||||||||||||   |||||||||| |||||||||    
T  29264015 gagaaatgatatttgtacaaccactttatgacaactttctttctcatact 29264064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 29293959 - 29294012
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||| |||||   |||||||||||||||||| |||||    
T  29293959 gagaaatgatatttgtacaactactttatgacaactttctctctcatagtcaca 29294012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 35030822 - 35030773
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatact 323  Q
    |||||||| ||| |||||||||| ||||  ||||||||||||||||||||    
T  35030822 gagaaatgttatttgtacaaccatttttgtacaactttctctctcatact 35030773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 37690429 - 37690482
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| ||||||| ||||||   |||| |||||||||||||||||||    
T  37690429 gagaaatgatatttgtacaatcactttatgacaattttctctctcatactcaca 37690482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 43612141 - 43612092
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatac 322  Q
    ||||||||||||| |||||||||| |||   |||||||||||||||||||    
T  43612141 agagaaatgatatttgtacaaccattttatgacaactttctctctcatac 43612092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 319
Target Start/End: Complemental strand, 48872088 - 48872043
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctca 319  Q
    |||||||||||| |||||||||| ||||  ||||||||||||||||    
T  48872088 gagaaatgatatttgtacaaccattttttgacaactttctctctca 48872043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 1603002 - 1603058
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||| || |||||| |||||||  | |||| |||||||||||||||||||||||||    
T  1603002 ttagataagtgatatttgtacaattattttttaacaactttctctctcatactcaca 1603058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 325
Target Start/End: Original strand, 4154591 - 4154643
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactca 325  Q
    ||||||||||||| ||||||   ||||||  ||||||||||||||||||||||    
T  4154591 agagaaatgatatatgtacatttactttttgacaactttctctctcatactca 4154643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 316
Target Start/End: Original strand, 10385421 - 10385469
Alignment:
Q  268 ttattagagaaatgatatctgtacaaccacttttcaacaactttctctc 316  Q
    |||| ||||||||||||| |||||||||| ||| | |||||||||||||    
T  10385421 ttataagagaaatgatatttgtacaaccattttgctacaactttctctc 10385469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 327
Target Start/End: Complemental strand, 35335566 - 35335510
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||| |||| |||||||||||||||  | || ||||||||| |||||||||    
T  35335566 ttagagaaatcatatttgtacaaccactttttgataattttctctcttatactcaca 35335510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 324
Target Start/End: Complemental strand, 38303749 - 38303697
Alignment:
Q  273 agagaaatgatatctgtacaaccactttt-caacaactttctctctcatactc 324  Q
    ||||||||||||| || ||| | |||||| |||||||||||||||||||||||    
T  38303749 agagaaatgatatttgaacatcaacttttacaacaactttctctctcatactc 38303697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 3332 - 3278
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||||||||||   ||||||||||||||||||||||||    
T  3332 agagaaatgatatttgtacaaccactttctcacaactttctctctcatactcaca 3278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 31661 - 31607
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| ||||  ||||||||||||||||||||||||    
T  31661 agagaaatgatatttgtacaaccattttttgacaactttctctctcatactcaca 31607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 5740846 - 5740792
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||||||||  |||||||| |||||||||||||||    
T  5740846 agagaaatgatatttgtacaaccactttttgacaactttttctctcatactcaca 5740792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 7325725 - 7325779
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||| |||||||  |||||||||||||||||||||||||    
T  7325725 agagaaatgatatttgtacatccactttataacaactttctctctcatactcaca 7325779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 37392189 - 37392135
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| ||||  ||||||||||||||||||||||||    
T  37392189 agagaaatgatatttgtacaaccattttttgacaactttctctctcatactcaca 37392135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 1370345 - 1370292
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| ||||||||||||||  |||||||||||||| ||||||||||    
T  1370345 gagaaatgatatttgtacaaccactttgtaacaactttctctcacatactcaca 1370292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 32777896 - 32777949
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||||||||||||| ||||  |||||||||||||| |||||||||    
T  32777896 gagaaatgatatctgtacaaccatttttatacaactttctctcttatactcaca 32777949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 5502369 - 5502424
Alignment:
Q  272 tagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||| ||||||||||||||   |||||||||||||||||| |||||    
T  5502369 tagagaaatgatatttgtacaaccactttgtgacaactttctctctcatattcaca 5502424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 324155 - 324101
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||| ||||||||  |||||||||||| |||||||||||    
T  324155 agagaaatgatatatgtacatccactttttgacaactttctctgtcatactcaca 324101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 320
Target Start/End: Complemental strand, 9047130 - 9047084
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcat 320  Q
    |||||||||||| |||||||||||||||  |||||||||||||||||    
T  9047130 gagaaatgatatttgtacaaccactttttgacaactttctctctcat 9047084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 13924021 - 13924075
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| ||||  ||||||||||||||||| ||||||    
T  13924021 agagaaatgatatttgtacaaccatttttgtacaactttctctctcatgctcaca 13924075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 18538385 - 18538439
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||  |||||||||||||||  |||||||| |||||||||||||||    
T  18538385 agagaaatgatacttgtacaaccactttttgacaactttatctctcatactcaca 18538439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 1796496 - 1796549
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| ||||||||||||||   |||||||||| |||||||||||||    
T  1796496 gagaaatgatatttgtacaaccactttgtgacaactttctttctcatactcaca 1796549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 6243045 - 6243098
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| ||||||| || ||||  ||||||||||||||||||||||||    
T  6243045 gagaaatgatatttgtacaatcatttttgtacaactttctctctcatactcaca 6243098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 41776186 - 41776239
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||| | ||||  ||||||||||||||||||||||||    
T  41776186 gagaaatgatatttgtacaactatttttgtacaactttctctctcatactcaca 41776239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 44103776 - 44103829
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||| |||| ||||||||||||||   ||||||||||||||||||||||||    
T  44103776 gagaaattatatttgtacaaccactttatgacaactttctctctcatactcaca 44103829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 45081398 - 45081451
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||||| |||| ||||| ||| |||||||||||||||    
T  45081398 gagaaatgatatttgtacaaccaatttttaacaattttgtctctcatactcaca 45081451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 327
Target Start/End: Original strand, 39211054 - 39211106
Alignment:
Q  275 agaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||| || ||||||| ||||  ||||||||||||||||||||||||    
T  39211054 agaaatgatatttgaacaaccattttttgacaactttctctctcatactcaca 39211106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 7010683 - 7010738
Alignment:
Q  272 tagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||| ||||||| || ||||  |||| |||||||||||||||||||    
T  7010683 tagagaaatgatatttgtacaatcattttttgacaattttctctctcatactcaca 7010738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 324
Target Start/End: Complemental strand, 14233705 - 14233654
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactc 324  Q
    ||||||||||||| |||||||| | ||||  |||||||||||||||||||||    
T  14233705 agagaaatgatatttgtacaactatttttttacaactttctctctcatactc 14233654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 325
Target Start/End: Original strand, 36675336 - 36675387
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactca 325  Q
    |||||||||||| |||||||||| ||||  |||||||| |||||||||||||    
T  36675336 gagaaatgatatttgtacaaccatttttgtacaactttttctctcatactca 36675387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 272 - 327
Target Start/End: Complemental strand, 45405881 - 45405826
Alignment:
Q  272 tagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||| |||||||||| |||   |||||||| |||||||||||||||    
T  45405881 tagagaaatgatatttgtacaaccattttgatacaactttttctctcatactcaca 45405826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 323
Target Start/End: Original strand, 157070 - 157116
Alignment:
Q  277 aaatgatatctgtacaaccacttttcaacaactttctctctcatact 323  Q
    ||||||||| |||||||||| ||| | ||||||||||||||||||||    
T  157070 aaatgatatttgtacaaccattttgcgacaactttctctctcatact 157116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 311
Target Start/End: Original strand, 3155842 - 3155880
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaacttt 311  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  3155842 agagaaatgatatttgtacaaccactttttaacaacttt 3155880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 25430656 - 25430710
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||| ||||  ||||| |||| |||||||||||||    
T  25430656 agagaaatgatatttgtacaaccatttttgtacaaccttctatctcatactcaca 25430710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 29107994 - 29108048
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||| || |||| ||||||||||||| | |||||||||    
T  29107994 agagaaatgatatttgtacaatcattttttaacaactttctcttttatactcaca 29108048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 38174294 - 38174240
Alignment:
Q  274 gagaaatgatatctgtacaacca-cttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||| | |||||  ||||||||||||||||||||||||    
T  38174294 gagaaatgatatttgtacaactatcttttagacaactttctctctcatactcaca 38174240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 38939250 - 38939196
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| | |||||| | ||||  ||||||||||||||||||||||||    
T  38939250 agagaaatgatatttctacaactatttttgtacaactttctctctcatactcaca 38939196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 42768179 - 42768129
Alignment:
Q  277 aaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||| |||||||| ||||||  |||| |||||||||||||||||||    
T  42768179 aaatgatatttgtacaactactttttgacaattttctctctcatactcaca 42768129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 311
Target Start/End: Complemental strand, 43066666 - 43066628
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaacttt 311  Q
    ||||||||||||| ||||||||||||||| |||||||||    
T  43066666 agagaaatgatatttgtacaaccactttttaacaacttt 43066628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 311
Target Start/End: Complemental strand, 21526352 - 21526315
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaacttt 311  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  21526352 gagaaatgatatttgtacaaccactttttaacaacttt 21526315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 324
Target Start/End: Complemental strand, 32020524 - 32020475
Alignment:
Q  275 agaaatgatatctgtacaaccacttttcaacaactttctctctcatactc 324  Q
    ||||||||||| |||||||||| ||||  | |||||||||||||||||||    
T  32020524 agaaatgatatttgtacaaccattttttgataactttctctctcatactc 32020475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 37471654 - 37471707
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| ||||||| || ||||  ||||||||||||||| ||||||||    
T  37471654 gagaaatgatatttgtacaatcatttttgtacaactttctctctcgtactcaca 37471707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 37524488 - 37524435
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| ||||||| ||||||   ||||||||||||| ||||||||||    
T  37524488 gagaaatgatatttgtacaagcactttgtgacaactttctctcacatactcaca 37524435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 311
Target Start/End: Original strand, 40102015 - 40102060
Alignment:
Q  266 tattattagagaaatgatatctgtacaaccacttttcaacaacttt 311  Q
    |||| ||||||||||||||| |||||||||||||||  ||||||||    
T  40102015 tatttttagagaaatgatatttgtacaaccactttttcacaacttt 40102060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 895935 - 895975
Alignment:
Q  275 agaaatgatatctgtacaaccacttttcaacaactttctct 315  Q
    ||||||||||| |||||||||||||||  ||||||||||||    
T  895935 agaaatgatatttgtacaaccactttttgacaactttctct 895975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 26442740 - 26442696
Alignment:
Q  257 tttttcaattattattagagaaatgatatctgtacaaccactttt 301  Q
    |||||| |||||| ||||||||||||||| ||||||| |||||||    
T  26442740 tttttccattatttttagagaaatgatatttgtacaaacactttt 26442696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 31517241 - 31517187
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||||||||||  |||||||| |||||||||||||||    
T  31517241 agagaaatgatatttgtacaaccactttttgacaactttttctctcatactcaca 31517187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 325
Target Start/End: Complemental strand, 12427288 - 12427236
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactca 325  Q
    ||||||||||||| |||||| ||||||||| |||||||||||| |||||||||    
T  12427288 agagaaatgatatttgtacatccacttttcgacaactttctctttcatactca 12427236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 272 - 327
Target Start/End: Complemental strand, 2241880 - 2241825
Alignment:
Q  272 tagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||| | |||||||||||||  |||||||| |||||||||||||||    
T  2241880 tagagaaatgatatttatacaaccactttttgacaactttttctctcatactcaca 2241825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 1196057 - 1196111
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||| |||||||  |||||||||||||| |||||||||    
T  1196057 agagaaatgatatttgtacaatcactttttgacaactttctctctaatactcaca 1196111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 12441537 - 12441591
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||||| |||||   ||||||||||||||||||||||||    
T  12441537 agagaaatgatatttgtacaactactttgtgacaactttctctctcatactcaca 12441591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 32644623 - 32644676
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||| | ||||  ||||||||||||||||||||||||    
T  32644623 gagaaatgatatttgtacaactattttttgacaactttctctctcatactcaca 32644676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 324
Target Start/End: Complemental strand, 2165361 - 2165310
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactc 324  Q
    ||||||||||||| |||||||||| ||||  |||||||| ||||||||||||    
T  2165361 agagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 2165310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 324
Target Start/End: Complemental strand, 2176994 - 2176943
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactc 324  Q
    ||||||||||||| |||||||||| ||||  |||||||| ||||||||||||    
T  2176994 agagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 2176943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 17442832 - 17442886
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||| |||| |||||||||| ||||  |||||||||||||| |||||||||    
T  17442832 agagaaataatatttgtacaaccatttttgtacaactttctctcttatactcaca 17442886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 25567551 - 25567497
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||  ||||||||| ||||  |||||||| |||||||||||||||    
T  25567551 agagaaatgatattcgtacaaccatttttgtacaactttatctctcatactcaca 25567497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 323
Target Start/End: Original strand, 32149499 - 32149549
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatact 323  Q
    |||||||| |||| ||||||||||||||   ||||||||||||||||||||    
T  32149499 agagaaataatatttgtacaaccactttgtgacaactttctctctcatact 32149549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 9395397 - 9395344
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||| | ||||  |||||||||||| |||||||||||    
T  9395397 gagaaatgatatttgtacaactatttttgtacaactttctctttcatactcaca 9395344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 323
Target Start/End: Original strand, 16121163 - 16121212
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatact 323  Q
    |||||||||||| |||||||||| ||||  |||||||||||| |||||||    
T  16121163 gagaaatgatatttgtacaaccatttttgtacaactttctctttcatact 16121212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 32135491 - 32135438
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| ||||||| || ||||  |||||||||||| |||||||||||    
T  32135491 gagaaatgatatttgtacaatcatttttgtacaactttctctatcatactcaca 32135438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 325
Target Start/End: Complemental strand, 6158841 - 6158789
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactca 325  Q
    ||||||||||||| ||||||  |||||||  |||||||| |||||||||||||    
T  6158841 agagaaatgatatatgtacattcactttttgacaactttatctctcatactca 6158789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 273 - 321
Target Start/End: Complemental strand, 16328762 - 16328714
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcata 321  Q
    ||||||||||||| |||||||||| |||  ||||||||| |||||||||    
T  16328762 agagaaatgatatttgtacaaccattttataacaactttatctctcata 16328714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 42081047 - 42081101
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||||| ||||||||  ||||||||||||||||||||||||    
T  42081047 agagaaatgatatttgtacagccactttttgacaactttctctctcatactcaca 42081101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 325
Target Start/End: Complemental strand, 10550523 - 10550468
Alignment:
Q  270 attagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactca 325  Q
    |||||||||||||||| |||||||| | ||||  ||||||||||||||||||||||    
T  10550523 attagagaaatgatatatgtacaactattttttcacaactttctctctcatactca 10550468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 8482293 - 8482239
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||||||||||   |||||||||||||||||| |||||    
T  8482293 agagaaatgatatttgtacaaccactttatgacaactttctctctcatattcaca 8482239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 323
Target Start/End: Original strand, 44422981 - 44423027
Alignment:
Q  277 aaatgatatctgtacaaccacttttcaacaactttctctctcatact 323  Q
    ||||||||| ||||||||||||||| ||||||||||||| |||||||    
T  44422981 aaatgatatttgtacaaccactttttaacaactttctctttcatact 44423027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 7121390 - 7121443
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||| ||||| |||  |||||||||||||||||||||||||    
T  7121390 gagaaatgatatttgtataaccattttgtaacaactttctctctcatactcaca 7121443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 327
Target Start/End: Complemental strand, 22296193 - 22296136
Alignment:
Q  270 attagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||||||| |||||||||| ||||  |||| ||||||||| |||||||||    
T  22296193 attagagaaatgatatttgtacaaccatttttgtacaattttctctctgatactcaca 22296136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 24727426 - 24727479
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||||| |||   ||||||||||||||||||||||||    
T  24727426 gagaaatgatatttgtacaaccattttggtacaactttctctctcatactcaca 24727479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 326
Target Start/End: Original strand, 28013966 - 28014019
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcac 326  Q
    |||||||| |||| |||||||||| ||||  |||||||||||||||||||||||    
T  28013966 agagaaattatatttgtacaaccaatttttgacaactttctctctcatactcac 28014019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 37738036 - 37737984
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| || ||||||| ||||| ||||||||||||||||||||||||    
T  37738036 gagaaatgatatttgaacaacca-ttttcgacaactttctctctcatactcaca 37737984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 38600825 - 38600878
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||| ||| ||||  ||||||||||||||||||||||||    
T  38600825 gagaaatgatatatgtacatccattttttgacaactttctctctcatactcaca 38600878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 45202192 - 45202139
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||||| ||||  |||||||||||||||||| |||||    
T  45202192 gagaaatgatatttgtacaaccatttttttacaactttctctctcatattcaca 45202139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 37966364 - 37966420
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||||| |||||||||| |||   |||||||| |||||||||||||||    
T  37966364 ttagagaaatgatatttgtacaaccaatttgtgacaactttttctctcatactcaca 37966420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 40496358 - 40496414
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||| |||||||| |||| | ||||||||  ||||||||||||||||||||||||    
T  40496358 ttagagtaatgatatatgtaaatccactttttgacaactttctctctcatactcaca 40496414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 27538986 - 27538923
Alignment:
Q  264 attattattagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||  |||||||||||| |||||||||| ||||  |||||||||||| | |||||||||    
T  27538986 attattatatgagaaatgatatttgtacaaccatttttgtacaactttctctatgatactcaca 27538923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 327
Target Start/End: Original strand, 29795441 - 29795500
Alignment:
Q  268 ttattagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||| ||||||||||||| |||||||||| |||   ||||||||||||| ||||||||||    
T  29795441 ttataagagaaatgatatttgtacaaccattttgtgacaactttctctcacatactcaca 29795500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 4138246 - 4138192
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| |||| ||| | |||  |||||||||||||||||||||||||    
T  4138246 agagaaatgatatttgtataactattttctaacaactttctctctcatactcaca 4138192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 5191755 - 5191701
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||  ||||||   |||||| |||||||||||||||||||||||||    
T  5191755 agagaaatgatagatgtacatttactttttaacaactttctctctcatactcaca 5191701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 19695752 - 19695698
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| ||||||| |||||||  |||||||||||||| ||| |||||    
T  19695752 agagaaatgatatttgtacaatcactttttgacaactttctctcttatattcaca 19695698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Original strand, 40700206 - 40700260
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||| ||| |||||||| | |||  |||||||||||||||||||||||||    
T  40700206 agagaaatggtatttgtacaactattttataacaactttctctctcatactcaca 40700260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 8757555 - 8757608
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||| ||| |||||||||| ||||  |||||||| |||||||||||||||    
T  8757555 gagaaatgttatttgtacaaccatttttatacaactttatctctcatactcaca 8757608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 11828877 - 11828828
Alignment:
Q  277 aaatgatatctgtacaaccacttttcaacaactttctctctcatactcac 326  Q
    ||||||||| |||||||||| ||||  |||||||||||||||||| ||||    
T  11828877 aaatgatatttgtacaaccatttttgtacaactttctctctcatattcac 11828828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 25801873 - 25801820
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||||||| |||   |||||||| |||||||||||||||    
T  25801873 gagaaatgatatttgtacaaccaatttgtgacaactttatctctcatactcaca 25801820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 43725216 - 43725269
Alignment:
Q  274 gagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    |||||||||||| |||||| | |||||   ||||||||||||||||||||||||    
T  43725216 gagaaatgatatttgtacatctactttatgacaactttctctctcatactcaca 43725269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 323
Target Start/End: Original strand, 44058727 - 44058780
Alignment:
Q  270 attagagaaatgatatctgtacaaccacttttcaacaactttctctctcatact 323  Q
    |||||||||||||||| ||||||| || |||| || ||| ||||||||||||||    
T  44058727 attagagaaatgatatttgtacaatcattttttaataacgttctctctcatact 44058780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 4036950 - 4036910
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaacttt 311  Q
    ||||||||||||||| |||||||| |||||| |||||||||    
T  4036950 ttagagaaatgatatttgtacaactactttttaacaacttt 4036910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 15141470 - 15141526
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||||| |||||| | | |||   ||||||||||||||||||||||||    
T  15141470 ttagagaaatgatatttgtacatctattttatgacaactttctctctcatactcaca 15141526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 43057061 - 43057101
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaacttt 311  Q
    ||||||||||||||| || |||||||||||| |||||||||    
T  43057061 ttagagaaatgatatttgaacaaccactttttaacaacttt 43057101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 324
Target Start/End: Original strand, 17048 - 17099
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactc 324  Q
    ||||||||||||| |||||||||| ||||  |||||||| ||||||||||||    
T  17048 agagaaatgatatttgtacaaccatttttgtacaactttatctctcatactc 17099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 327
Target Start/End: Complemental strand, 29833 - 29779
Alignment:
Q  273 agagaaatgatatctgtacaaccacttttcaacaactttctctctcatactcaca 327  Q
    ||||||||||||| | |||||||||||||  |||||||||| |||||| ||||||    
T  29833 agagaaatgatatttatacaaccactttttgacaactttctttctcatgctcaca 29779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 323
Target Start/End: Complemental strand, 71645 - 71599
Alignment:
Q  277 aaatgatatctgtacaaccacttttcaacaactttctctctcatact 323  Q
    ||||||||| ||||||||||| ||| ||||||||| |||||||||||    
T  71645 aaatgatatttgtacaaccacctttgaacaactttatctctcatact 71599  T

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Target: scaffold0504 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 323
Target Start/End: Original strand, 11159 - 11207
Alignment:
Q  275 agaaatgatatctgtacaaccacttttcaacaactttctctctcatact 323  Q
    ||||||||||| |||||||||| |||| ||||||||| ||||| |||||    
T  11159 agaaatgatatttgtacaaccatttttgaacaactttatctcttatact 11207  T

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Target: scaffold0115 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 15262 - 15222
Alignment:
Q  271 ttagagaaatgatatctgtacaaccacttttcaacaacttt 311  Q
    ||||||||||||||| ||||||| ||||||| |||||||||    
T  15262 ttagagaaatgatatttgtacaatcactttttaacaacttt 15222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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