View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17657_high_49 (Length: 253)
Name: NF17657_high_49
Description: NF17657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17657_high_49 |
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Alignment Details
Target: chr2 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 57 - 203
Target Start/End: Complemental strand, 38151240 - 38151094
Alignment:
| Q |
57 |
acagatatcctacaaaggatggaaaaagaaaaagtcaacagcnnnnnnnntctctagccactagggaagagatgaggaaatccaaaacaacacggttcca |
156 |
Q |
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| T |
38151240 |
acagatatcctacaaatgatggaaaaagaaaaagtcaacagcaaaaaaaatctctagccactagggaagagatgaggaaatccaaaacaacacggttcca |
38151141 |
T |
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| Q |
157 |
tcaaagttttatcagagagatctggacatctggtataggaaaggttt |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38151140 |
tcaaagttttatcagagagatctggacatctggtataggaaaggttt |
38151094 |
T |
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