View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17657_low_6 (Length: 568)

Name: NF17657_low_6
Description: NF17657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17657_low_6
NF17657_low_6
[»] chr6 (29 HSPs)
chr6 (16-323)||(33105440-33105747)
chr6 (403-469)||(33105294-33105360)
chr6 (123-187)||(31705575-31705639)
chr6 (123-186)||(15589772-15589835)
chr6 (123-186)||(19402499-19402562)
chr6 (123-181)||(12653965-12654023)
chr6 (123-187)||(30813467-30813531)
chr6 (123-187)||(31804603-31804667)
chr6 (123-186)||(8693318-8693381)
chr6 (123-186)||(12481026-12481089)
chr6 (123-186)||(23654660-23654723)
chr6 (128-181)||(4660844-4660897)
chr6 (128-188)||(2304490-2304550)
chr6 (127-163)||(33195009-33195045)
chr6 (118-186)||(35219555-35219623)
chr6 (123-186)||(1106510-1106573)
chr6 (123-186)||(2488533-2488596)
chr6 (123-186)||(4085087-4085150)
chr6 (123-186)||(5146337-5146400)
chr6 (123-186)||(23101055-23101117)
chr6 (123-161)||(20742778-20742816)
chr6 (123-180)||(4663481-4663538)
chr6 (132-177)||(4921564-4921609)
chr6 (123-159)||(5084973-5085009)
chr6 (123-187)||(5545069-5545133)
chr6 (123-187)||(6295896-6295960)
chr6 (123-187)||(6302706-6302770)
chr6 (130-186)||(6419533-6419589)
chr6 (123-163)||(20496606-20496646)
[»] chr3 (33 HSPs)
chr3 (123-187)||(53155085-53155149)
chr3 (123-186)||(49627759-49627822)
chr3 (123-186)||(22485376-22485440)
chr3 (130-187)||(48401502-48401559)
chr3 (123-187)||(13701657-13701721)
chr3 (123-187)||(41867988-41868052)
chr3 (123-186)||(3457333-3457396)
chr3 (123-186)||(11819495-11819558)
chr3 (123-186)||(33637805-33637868)
chr3 (123-186)||(36623918-36623981)
chr3 (123-186)||(55090354-55090417)
chr3 (130-187)||(2192488-2192545)
chr3 (124-188)||(31462410-31462475)
chr3 (123-187)||(14585872-14585936)
chr3 (118-186)||(30155940-30156008)
chr3 (123-159)||(31550348-31550384)
chr3 (123-163)||(44984520-44984560)
chr3 (123-186)||(34960584-34960646)
chr3 (128-187)||(55455272-55455331)
chr3 (116-186)||(2598467-2598537)
chr3 (128-186)||(24483356-24483414)
chr3 (129-163)||(46732413-46732447)
chr3 (123-181)||(48652104-48652162)
chr3 (123-180)||(19645607-19645664)
chr3 (130-163)||(37452121-37452154)
chr3 (130-187)||(45664610-45664667)
chr3 (283-319)||(550402-550438)
chr3 (132-188)||(11225742-11225798)
chr3 (131-187)||(32080426-32080482)
chr3 (130-186)||(36691461-36691517)
chr3 (130-181)||(38530340-38530392)
chr3 (118-186)||(45047908-45047976)
chr3 (130-186)||(54706394-54706450)
[»] chr4 (51 HSPs)
chr4 (123-186)||(19745801-19745864)
chr4 (123-186)||(19793942-19794005)
chr4 (123-186)||(20887404-20887467)
chr4 (123-186)||(18502489-18502552)
chr4 (123-187)||(7083468-7083532)
chr4 (128-188)||(13169112-13169172)
chr4 (123-187)||(42197963-42198027)
chr4 (123-186)||(393921-393984)
chr4 (123-178)||(7084361-7084416)
chr4 (123-186)||(8712919-8712982)
chr4 (123-186)||(24826050-24826113)
chr4 (123-186)||(55600193-55600256)
chr4 (123-181)||(12716779-12716837)
chr4 (128-186)||(13965954-13966012)
chr4 (123-181)||(31522362-31522420)
chr4 (128-186)||(45350722-45350780)
chr4 (128-186)||(45360201-45360259)
chr4 (123-180)||(14346827-14346884)
chr4 (123-187)||(24568364-24568426)
chr4 (123-180)||(30416288-30416345)
chr4 (123-176)||(38434998-38435051)
chr4 (131-187)||(22121842-22121898)
chr4 (123-187)||(37431566-37431630)
chr4 (118-186)||(43244023-43244091)
chr4 (130-186)||(46268076-46268132)
chr4 (123-187)||(50274371-50274435)
chr4 (123-186)||(6882355-6882418)
chr4 (123-186)||(24100544-24100607)
chr4 (123-186)||(27091119-27091182)
chr4 (128-186)||(8517111-8517169)
chr4 (130-188)||(23964058-23964116)
chr4 (123-181)||(56236478-56236536)
chr4 (508-553)||(49368-49413)
chr4 (123-180)||(7242447-7242504)
chr4 (123-180)||(11209960-11210017)
chr4 (118-187)||(29266546-29266615)
chr4 (123-188)||(35338684-35338749)
chr4 (123-176)||(44374936-44374989)
chr4 (123-163)||(477668-477708)
chr4 (123-187)||(3159372-3159436)
chr4 (123-187)||(3171271-3171335)
chr4 (123-187)||(6912090-6912154)
chr4 (130-186)||(7060725-7060781)
chr4 (123-163)||(26742119-26742159)
chr4 (118-186)||(28837466-28837534)
chr4 (123-163)||(31994452-31994492)
chr4 (118-186)||(36123999-36124067)
chr4 (123-187)||(38545814-38545878)
chr4 (123-163)||(39797388-39797428)
chr4 (123-187)||(46716555-46716619)
chr4 (130-186)||(51152526-51152581)
[»] chr1 (30 HSPs)
chr1 (124-187)||(10304973-10305036)
chr1 (130-186)||(3233182-3233238)
chr1 (123-187)||(42491279-42491343)
chr1 (130-188)||(17347984-17348042)
chr1 (123-187)||(25032750-25032814)
chr1 (123-186)||(4882024-4882087)
chr1 (123-186)||(29205679-29205742)
chr1 (123-186)||(37822010-37822073)
chr1 (123-186)||(44517559-44517622)
chr1 (123-180)||(44513663-44513720)
chr1 (123-187)||(51418394-51418458)
chr1 (124-187)||(900440-900503)
chr1 (123-186)||(12872017-12872080)
chr1 (123-186)||(16141022-16141085)
chr1 (123-186)||(28677786-28677849)
chr1 (123-186)||(32879104-32879167)
chr1 (130-181)||(33703178-33703229)
chr1 (118-168)||(2486329-2486379)
chr1 (126-180)||(34659305-34659359)
chr1 (122-187)||(1141088-1141153)
chr1 (127-180)||(11121372-11121425)
chr1 (123-180)||(13969301-13969358)
chr1 (130-187)||(26771495-26771552)
chr1 (123-180)||(46589544-46589601)
chr1 (123-187)||(15790923-15790987)
chr1 (123-187)||(22031763-22031827)
chr1 (123-163)||(26199993-26200033)
chr1 (123-187)||(30678649-30678713)
chr1 (124-180)||(30853609-30853665)
chr1 (130-186)||(33486690-33486746)
[»] scaffold0536 (1 HSPs)
scaffold0536 (123-188)||(3304-3369)
[»] chr5 (27 HSPs)
chr5 (118-186)||(34431475-34431543)
chr5 (123-182)||(39531055-39531114)
chr5 (124-188)||(9196679-9196743)
chr5 (123-187)||(11734492-11734556)
chr5 (123-187)||(26294020-26294084)
chr5 (123-187)||(32309906-32309970)
chr5 (123-187)||(42505060-42505124)
chr5 (128-187)||(6635658-6635717)
chr5 (123-186)||(7771468-7771531)
chr5 (123-186)||(17331739-17331802)
chr5 (123-186)||(18654193-18654256)
chr5 (123-186)||(23881763-23881826)
chr5 (123-186)||(39179492-39179555)
chr5 (123-187)||(17095888-17095952)
chr5 (123-186)||(6681524-6681587)
chr5 (123-186)||(17732034-17732097)
chr5 (123-186)||(20483597-20483660)
chr5 (123-186)||(26294721-26294784)
chr5 (123-188)||(17325324-17325390)
chr5 (124-186)||(42396158-42396220)
chr5 (130-187)||(17218112-17218169)
chr5 (123-180)||(28662466-28662523)
chr5 (123-180)||(37219398-37219455)
chr5 (123-180)||(40775157-40775214)
chr5 (123-163)||(7151230-7151270)
chr5 (123-163)||(28540683-28540723)
chr5 (123-187)||(33164116-33164180)
[»] chr2 (39 HSPs)
chr2 (123-187)||(29543203-29543267)
chr2 (123-186)||(18089059-18089122)
chr2 (123-186)||(20560780-20560843)
chr2 (123-186)||(35333916-35333979)
chr2 (127-181)||(13548570-13548624)
chr2 (123-188)||(33012457-33012522)
chr2 (118-186)||(3527397-3527465)
chr2 (123-187)||(13113421-13113485)
chr2 (118-186)||(13878651-13878719)
chr2 (118-186)||(14018776-14018844)
chr2 (123-186)||(25068252-25068315)
chr2 (118-180)||(11798180-11798242)
chr2 (117-187)||(15920263-15920333)
chr2 (123-188)||(17054712-17054776)
chr2 (118-163)||(17767212-17767257)
chr2 (118-187)||(28230739-28230808)
chr2 (123-188)||(36868417-36868482)
chr2 (119-187)||(11942778-11942846)
chr2 (123-187)||(25622705-25622769)
chr2 (123-187)||(38384113-38384177)
chr2 (118-186)||(43696279-43696347)
chr2 (123-186)||(4739740-4739803)
chr2 (128-187)||(9689637-9689696)
chr2 (123-186)||(12705097-12705160)
chr2 (123-186)||(12890764-12890827)
chr2 (123-186)||(16136489-16136552)
chr2 (123-186)||(28261552-28261615)
chr2 (123-186)||(32015664-32015727)
chr2 (123-186)||(34416410-34416473)
chr2 (131-186)||(44942697-44942752)
chr2 (123-188)||(17073146-17073210)
chr2 (126-187)||(40038973-40039034)
chr2 (123-180)||(40125781-40125838)
chr2 (123-187)||(4703541-4703605)
chr2 (131-187)||(5754692-5754748)
chr2 (123-163)||(7639990-7640030)
chr2 (132-188)||(17304188-17304244)
chr2 (128-180)||(26491697-26491749)
chr2 (123-187)||(27096099-27096163)
[»] chr7 (40 HSPs)
chr7 (123-186)||(44482525-44482588)
chr7 (123-186)||(48304039-48304102)
chr7 (123-180)||(4621027-4621084)
chr7 (125-186)||(24319872-24319933)
chr7 (123-188)||(39989836-39989901)
chr7 (123-186)||(37593494-37593557)
chr7 (123-186)||(46025702-46025765)
chr7 (128-186)||(21991073-21991131)
chr7 (130-187)||(11833428-11833485)
chr7 (130-187)||(31254785-31254842)
chr7 (118-187)||(34871136-34871205)
chr7 (123-187)||(3266784-3266848)
chr7 (123-187)||(6667805-6667869)
chr7 (123-187)||(26017319-26017383)
chr7 (130-186)||(27535838-27535894)
chr7 (118-186)||(36253341-36253409)
chr7 (123-187)||(39532622-39532686)
chr7 (123-163)||(39707702-39707742)
chr7 (123-187)||(41288366-41288430)
chr7 (123-186)||(2623003-2623066)
chr7 (123-186)||(9785728-9785791)
chr7 (127-186)||(38277208-38277267)
chr7 (132-187)||(42603435-42603490)
chr7 (123-169)||(43369544-43369591)
chr7 (125-187)||(21603868-21603930)
chr7 (123-161)||(37714900-37714938)
chr7 (123-177)||(48643473-48643527)
chr7 (123-187)||(7765524-7765589)
chr7 (123-180)||(16273777-16273834)
chr7 (123-180)||(28664603-28664660)
chr7 (123-176)||(33095783-33095836)
chr7 (123-180)||(34893503-34893560)
chr7 (123-180)||(37890151-37890208)
chr7 (130-162)||(10624217-10624249)
chr7 (130-186)||(21954487-21954543)
chr7 (135-187)||(22747168-22747220)
chr7 (129-185)||(25112899-25112955)
chr7 (123-163)||(33901974-33902014)
chr7 (123-163)||(35133221-35133261)
chr7 (123-179)||(39090485-39090541)
[»] chr8 (30 HSPs)
chr8 (123-184)||(5526215-5526276)
chr8 (123-188)||(13570422-13570487)
chr8 (123-186)||(10148347-10148410)
chr8 (128-186)||(24790830-24790888)
chr8 (126-187)||(37613046-37613107)
chr8 (130-187)||(38545478-38545535)
chr8 (123-187)||(2234125-2234189)
chr8 (127-187)||(5457460-5457520)
chr8 (123-187)||(9501978-9502042)
chr8 (123-187)||(10334886-10334950)
chr8 (123-163)||(15286687-15286727)
chr8 (123-163)||(15467056-15467096)
chr8 (128-188)||(20993201-20993261)
chr8 (130-181)||(2968931-2968982)
chr8 (123-186)||(7579510-7579573)
chr8 (130-181)||(13575871-13575922)
chr8 (118-181)||(23970838-23970901)
chr8 (123-186)||(26912038-26912101)
chr8 (123-186)||(28296770-28296833)
chr8 (131-181)||(1809901-1809951)
chr8 (128-186)||(31202859-31202917)
chr8 (123-188)||(14600353-14600418)
chr8 (123-180)||(16937000-16937057)
chr8 (130-187)||(27989079-27989136)
chr8 (130-187)||(28046381-28046438)
chr8 (123-188)||(39067345-39067410)
chr8 (130-187)||(41362143-41362200)
chr8 (118-187)||(43936830-43936899)
chr8 (123-187)||(8054469-8054533)
chr8 (131-163)||(11967996-11968028)
[»] scaffold0056 (1 HSPs)
scaffold0056 (118-186)||(74575-74643)
[»] scaffold0001 (1 HSPs)
scaffold0001 (123-187)||(403895-403959)
[»] scaffold0155 (1 HSPs)
scaffold0155 (128-186)||(35486-35544)
[»] scaffold0432 (1 HSPs)
scaffold0432 (130-187)||(2102-2159)
[»] scaffold0294 (1 HSPs)
scaffold0294 (123-186)||(3714-3777)
[»] scaffold0321 (1 HSPs)
scaffold0321 (123-187)||(6776-6841)
[»] scaffold0090 (1 HSPs)
scaffold0090 (123-188)||(11215-11280)


Alignment Details
Target: chr6 (Bit Score: 164; Significance: 2e-87; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 16 - 323
Target Start/End: Complemental strand, 33105747 - 33105440
Alignment:
Q  16 ataaattatggtaacgagaacaaccttgactagaaataatcctggctgaaataatccaaatataggaagat--tgatcgtgtattttagaacaactactg 113  Q
    |||||||| ||||| ||||||| |||| ||||||||||||||| || |||||||||| || ||| ||||||  |||||||||||||||||||||||| ||    
T  33105747 ataaattacggtaatgagaacaccctt-actagaaataatccttgcagaaataatcccaaaataagaagatcatgatcgtgtattttagaacaactagtg 33105649  T
Q  114 taacatttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatttt-atctgttaaaacaaactcccaac 212  Q
     ||| ||||||||||||| | ||||| |||||||  ||||||||||||||||||| |||||| ||||||||||||| ||  |||||||||||||| ||||    
T  33105648 aaacgtttgtttttacaaca-taaactatattcatgcatttaaattgatacattatgtcgatgcaatataaattttcattcgttaaaacaaactcacaac 33105550  T
Q  213 atctatcttaaaagcataaaatgaaatacctatgtctttgaatctgcattgttgatgatgtgaaagccaatgattgaatatgcaattgatcaaagctaac 312  Q
    |||||||||||| |||||||| ||||| |  ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33105549 atctatcttaaa-gcataaaacgaaatgctcatgtctttgaatctgcagtgttgatgatgtgaaagccaatgattaaatatgcaattgatcaaagctaac 33105451  T
Q  313 atttcaacatg 323  Q
    |||||||||||    
T  33105450 atttcaacatg 33105440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 403 - 469
Target Start/End: Complemental strand, 33105360 - 33105294
Alignment:
Q  403 gggctatgctaagacggcgaaatgacacaactccaactacagataagtaaaaaccacctatttaagt 469  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  33105360 gggctatgctaagacggcgaaatgacacaaatccaactacaaataagtaaaaaccacttatttaagt 33105294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 31705639 - 31705575
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||||||||||||||||| ||||||||||||||| | ||| ||||||||||| |||||    
T  31705639 ttttgacaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatacaaatt 31705575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 15589772 - 15589835
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||||||||    
T  15589772 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatataaat 15589835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 19402499 - 19402562
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  19402499 tttttacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 19402562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 12653965 - 12654023
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaata 181  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||| |||||||||||    
T  12653965 tttttacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaata 12654023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 30813531 - 30813467
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| |||||    
T  30813531 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatt 30813467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 31804667 - 31804603
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||||||||||||||| | ||||||||||||||| | ||| |||||| |||| |||||    
T  31804667 tttttacaaaaataaacgatatttattcatttaaattgatagagtacatcgatataataaaaatt 31804603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 8693318 - 8693381
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||| | ||||| ||||||||| | ||| ||||||||||| ||||    
T  8693318 tttttacaaaaataaacgatatttattcattcaaattgatagagtacatcgatacaatacaaat 8693381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 12481026 - 12481089
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  12481026 ttttgacaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaat 12481089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 23654723 - 23654660
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  23654723 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 23654660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 128 - 181
Target Start/End: Complemental strand, 4660897 - 4660844
Alignment:
Q  128 acaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaata 181  Q
    |||||||||||||||||||| ||||| ||||||||| | ||| |||||||||||    
T  4660897 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaata 4660844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 2304490 - 2304550
Alignment:
Q  128 acaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||||| ||||||||||||| ||||||||||||||| | ||| ||||| ||||| ||||||    
T  2304490 acaaaagtaaacgatattcattcatttaaattgatagagtacatcgatgcaatacaaattt 2304550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 33195045 - 33195009
Alignment:
Q  127 tacaaaaataaacgatattcaatcatttaaattgata 163  Q
    |||||||||||| ||||||||||||||||||||||||    
T  33195045 tacaaaaataaatgatattcaatcatttaaattgata 33195009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 35219555 - 35219623
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||| |||||||||||||||||||| ||||| |||||| || | ||| ||||||||||| ||||    
T  35219555 attttttttgacaaaaataaacgatattcattcattcaaattggtagagtacatcgatacaatacaaat 35219623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 1106510 - 1106573
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| | ||||||| | ||| ||||||||||| ||||    
T  1106510 ttttgacaaaaataaacgatattcattcattcagattgatagagtacatcgatacaatacaaat 1106573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 2488596 - 2488533
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||| | ||||| ||||||||| | ||| ||||||||||| ||||    
T  2488596 ttttgacaaaaataaacgatatttattcattcaaattgatagagtacatcgatacaatacaaat 2488533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 4085150 - 4085087
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||||| ||| | |||| |||| | ||| ||||||||||| ||||    
T  4085150 tttttacaaaaataaacgatattcattcagtcaaatcgatagagtacatcgatacaatacaaat 4085087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 5146400 - 5146337
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| |||||| |||| ||||    
T  5146400 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatataatacaaat 5146337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 23101055 - 23101117
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||||| ||| | ||||||||| | ||| ||||||||||| ||||    
T  23101055 tttttacaaaaataaacgatattcattca-tcaaattgatagagtacatcgatacaatacaaat 23101117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 20742778 - 20742816
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattga 161  Q
    |||||||||||||||| |||||||| |||||||||||||    
T  20742778 tttttacaaaaataaatgatattcattcatttaaattga 20742816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 4663481 - 4663538
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    ||||||||||||||||| ||||||| ||||| |||||| || | ||| ||||||||||    
T  4663481 tttttacaaaaataaacaatattcattcattcaaattggtagagtacatcgatacaat 4663538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 4921564 - 4921609
Alignment:
Q  132 aaataaacgatattcaatcatttaaattgatacattacgtcgatac 177  Q
    |||||||||||||||| ||||||||||||||| | ||| |||||||    
T  4921564 aaataaacgatattcattcatttaaattgatagagtacatcgatac 4921609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 5085009 - 5084973
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaatt 159  Q
    ||||||||||||||||||||||||| ||||| |||||    
T  5085009 tttttacaaaaataaacgatattcattcattcaaatt 5084973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 5545133 - 5545069
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| ||||||||||| |||||||| ||||| ||||||||| | ||| | |||||||| ||||||    
T  5545133 ttttgacaaaaataaatgatattcattcattcaaattgatagagtacattgatacaatgtaaatt 5545069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 6295896 - 6295960
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||||||||  ||||||| ||||| ||||||||| | ||| ||||||||||| |||||    
T  6295896 ttttgacaaaaataaataatattcattcattcaaattgatagagtacatcgatacaatacaaatt 6295960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 6302706 - 6302770
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||||||||  ||||||| ||||| ||||||||| | ||| ||||||||||| |||||    
T  6302706 ttttgacaaaaataaataatattcattcattcaaattgatagagtacatcgatacaatacaaatt 6302770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 6419533 - 6419589
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| ||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  6419533 aaaagtaaacgatattcattcattcaaattgatagactacatcgatacaatacaaat 6419589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 20496646 - 20496606
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgata 163  Q
    |||||||||||||||| |||||||| ||||| |||||||||    
T  20496646 tttttacaaaaataaatgatattcattcattcaaattgata 20496606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 53155085 - 53155149
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||| |||||    
T  53155085 tttttacaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatacaaatt 53155149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 49627759 - 49627822
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||||||||    
T  49627759 tttttacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatataaat 49627822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 22485440 - 22485376
Alignment:
Q  123 tttttacaaaaataaacgatattcaat-catttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||||| | |||||||||||||||| ||| ||||||||||| ||||    
T  22485440 tttttacaaaaataaacgatattcatttcatttaaattgatacaatacatcgatacaatacaaat 22485376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 48401559 - 48401502
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||||||||||||| ||||| ||||||||| | ||| |||||||||||||||||    
T  48401559 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatataaatt 48401502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 13701657 - 13701721
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| |||||    
T  13701657 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatt 13701721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 41867988 - 41868052
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||||||||||||||||| || ||||| ||||||||| | ||| ||||||||||| |||||    
T  41867988 tttttacaaaaataaacgatatgcattcattcaaattgatagagtacatcgatacaatacaaatt 41868052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 3457396 - 3457333
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||| |||||||||||||||||| ||||||||||||||| | ||| | ||||||||| ||||    
T  3457396 tttttataaaaataaacgatattcattcatttaaattgatagagtacattgatacaatacaaat 3457333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 11819558 - 11819495
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  11819558 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 11819495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 33637868 - 33637805
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  33637868 ttttgacaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaat 33637805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 36623918 - 36623981
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||| |||||||| ||||| ||||||||| | ||| ||| ||||||||||||    
T  36623918 tttttacaaaaataaatgatattcattcattcaaattgatagagtacatcggtacaatataaat 36623981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 55090354 - 55090417
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  55090354 ttttcacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 55090417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 2192545 - 2192488
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| |||||    
T  2192545 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatt 2192488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 31462410 - 31462475
Alignment:
Q  124 ttttacaaaaa-taaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    ||||||||||| ||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||||    
T  31462410 ttttacaaaaagtaaacgatattcattcattcaaattgataaagtacatcgatacaatacaaattt 31462475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 14585936 - 14585872
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| || |||||||| |||||    
T  14585936 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcaatacaatacaaatt 14585872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 30155940 - 30156008
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||| |||||||||||||||| ||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  30155940 attttttttgacaaaaataaacgatactcattcattcaaattgatagagtacatcgatacaatacaaat 30156008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 31550384 - 31550348
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaatt 159  Q
    ||||||||||||||||||||||||| |||||||||||    
T  31550384 tttttacaaaaataaacgatattcattcatttaaatt 31550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 44984520 - 44984560
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgata 163  Q
    |||||||||||||||||||||| || |||||||||||||||    
T  44984520 tttttacaaaaataaacgatatccattcatttaaattgata 44984560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 34960584 - 34960646
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||| |||||||||||||||||| ||||| ||||||||| |  || ||||||||||||||||    
T  34960584 tttttataaaaataaacgatattcattcattcaaattgataga-cacatcgatacaatataaat 34960646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 55455331 - 55455272
Alignment:
Q  128 acaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||||||||||||||| ||||| ||||||||| | ||| | ||||||||| |||||    
T  55455331 acaaaaataaacgatattcattcattcaaattgatagagtacattgatacaatacaaatt 55455272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 2598537 - 2598467
Alignment:
Q  116 acatttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||| |||||||||||||||| ||||||||   ||| ||||||||| | ||| ||||||||||| ||||    
T  2598537 acatttttttttacaaaaataaatgatattcatgtattcaaattgatatagtacatcgatacaatacaaat 2598467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 24483356 - 24483414
Alignment:
Q  128 acaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||||||| ||||| ||||||||| | ||| |||||| |||| ||||    
T  24483356 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatagaatacaaat 24483414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 163
Target Start/End: Original strand, 46732413 - 46732447
Alignment:
Q  129 caaaaataaacgatattcaatcatttaaattgata 163  Q
    ||||||||||||||||||| |||||||||||||||    
T  46732413 caaaaataaacgatattcattcatttaaattgata 46732447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 48652104 - 48652162
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaata 181  Q
    |||| ||||||||||| |||||||| ||||| ||||||||| | ||| |||||||||||    
T  48652104 ttttgacaaaaataaatgatattcattcattcaaattgataaagtacatcgatacaata 48652162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 19645664 - 19645607
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| || |||||||    
T  19645664 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcaatacaat 19645607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 163
Target Start/End: Complemental strand, 37452154 - 37452121
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgata 163  Q
    |||||||||||||||||| |||||||||||||||    
T  37452154 aaaaataaacgatattcattcatttaaattgata 37452121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 45664667 - 45664610
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||| |||||||| ||||||||||||||| | ||| |||||| ||| ||||||    
T  45664667 aaaaataaatgatattcattcatttaaattgatagagtacatcgatataatgtaaatt 45664610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 283 - 319
Target Start/End: Complemental strand, 550438 - 550402
Alignment:
Q  283 tgattgaatatgcaattgatcaaagctaacatttcaa 319  Q
    |||||||||||||||||||| |||||||| |||||||    
T  550438 tgattgaatatgcaattgatgaaagctaatatttcaa 550402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 11225798 - 11225742
Alignment:
Q  132 aaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||||||||||||||| ||||| ||||||||| | ||  ||||||||||| ||||||    
T  11225798 aaataaacgatattcattcattcaaattgatataatatatcgatacaatagaaattt 11225742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 32080426 - 32080482
Alignment:
Q  131 aaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||||||||  ||||| ||||||||| | ||| ||||||||||| |||||    
T  32080426 aaaataaacgatattctttcattcaaattgatagagtacatcgatacaatacaaatt 32080482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 36691461 - 36691517
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||||| ||||| |||| |||| | ||| ||||||||||| ||||    
T  36691461 aaaaataaacgatattcattcattcaaatcgataaagtacatcgatacaatacaaat 36691517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 38530392 - 38530340
Alignment:
Q  130 aaaaataaacgatattcaa-tcatttaaattgatacattacgtcgatacaata 181  Q
    ||||||||||||||||||| ||||| ||||||||| | ||| |||||||||||    
T  38530392 aaaaataaacgatattcaattcattcaaattgatagagtacatcgatacaata 38530340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 45047976 - 45047908
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||| ||||||||||| |||||||| ||||| ||||||||| | ||  ||||||||||| ||||    
T  45047976 attttttttgacaaaaataaatgatattcattcattcaaattgatagagtatatcgatacaatacaaat 45047908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 54706394 - 54706450
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||||| ||||| ||||||||| | ||| ||| ||||||| ||||    
T  54706394 aaaaataaacgatattcattcattcaaattgatagagtacatcgttacaatacaaat 54706450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 9e-16; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 19745864 - 19745801
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||| ||||    
T  19745864 tttttacaaaaataaacgatattcaatcatttaaattgatagagtatatcgatacaatacaaat 19745801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 19793942 - 19794005
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||  ||||||||||| ||||    
T  19793942 tttttacaaaaataaacgatattcaatcatttaaattgatagagtatatcgatacaatacaaat 19794005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 20887404 - 20887467
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||||    
T  20887404 ttttgacaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatataaat 20887467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 18502489 - 18502552
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||||||||||||| | ||| ||||||||||| ||||    
T  18502489 ttttgacaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatacaaat 18502552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 7083468 - 7083532
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||| |||||||||||||||||| ||| | ||||||||| | ||| |||||||||||||||||    
T  7083468 tttttaaaaaaataaacgatattcattcactcaaattgatagagtacatcgatacaatataaatt 7083532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 13169112 - 13169172
Alignment:
Q  128 acaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||||||||||||||||||||| ||| ||||||||| | ||| || |||||||||||||||    
T  13169112 acaaaaataaacgatattcaataattcaaattgataaagtacatcaatacaatataaattt 13169172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 42198027 - 42197963
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| |||||    
T  42198027 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatt 42197963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 393921 - 393984
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  393921 ttttaacaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaat 393984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 7084416 - 7084361
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgataca 178  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||| ||||||||    
T  7084416 tttttacaaaaataaacgatattcattcattcaaattgatagagtacatcgataca 7084361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 8712982 - 8712919
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||| | ||||| ||||||||| | ||| ||||||||||| ||||    
T  8712982 tttttacaaaaataaacgatatttattcattcaaattgatagagtacatcgatacaatacaaat 8712919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 24826113 - 24826050
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||| |||||| |||| ||||    
T  24826113 tttttacaaaaataaacgatattcattcattcaaattgatagagtacatcgatagaatacaaat 24826050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 55600193 - 55600256
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | | | ||||||||||| ||||    
T  55600193 tttttacaaaaataaacgatattcattcattcaaattgatagagtgcatcgatacaatacaaat 55600256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 12716779 - 12716837
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaata 181  Q
    |||||| |||||||||||||||||| | ||| ||||||||| ||||| |||||||||||    
T  12716779 tttttataaaaataaacgatattcatttattcaaattgataaattacatcgatacaata 12716837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 13966012 - 13965954
Alignment:
Q  128 acaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  13966012 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 13965954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 31522420 - 31522362
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaata 181  Q
    |||||||| |||||||||||||||| ||||| ||||||||| | ||| |||||||||||    
T  31522420 tttttacagaaataaacgatattcattcattcaaattgatagagtacatcgatacaata 31522362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 45350722 - 45350780
Alignment:
Q  128 acaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  45350722 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 45350780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 45360201 - 45360259
Alignment:
Q  128 acaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  45360201 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 45360259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 14346884 - 14346827
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||    
T  14346884 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaat 14346827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 24568364 - 24568426
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| ||||||||||  |||||||| ||||| ||||||||| ||||| |||||||||||||||||    
T  24568364 ttttgacaaaaataa--gatattcattcattcaaattgatagattacatcgatacaatataaatt 24568426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 30416288 - 30416345
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    |||| ||||||||||| |||||||| ||||||||||||||| | ||| ||||||||||    
T  30416288 ttttgacaaaaataaatgatattcattcatttaaattgatagagtacatcgatacaat 30416345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 38435051 - 38434998
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgata 176  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||| ||||||    
T  38435051 tttttacaaaaataaacgatattcattcattcaaattgatagagtacatcgata 38434998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 22121898 - 22121842
Alignment:
Q  131 aaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||||||||||||||||||||| |||||| | ||| || |||||||| |||||    
T  22121898 aaaataaacgatattcaatcatttaatttgatagagtacatcaatacaatacaaatt 22121842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 37431630 - 37431566
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||||||||||||||||  || |||||||||||| | ||  ||||||||||| |||||    
T  37431630 tttttacaaaaataaacgatattctttcttttaaattgatagagtatatcgatacaatacaaatt 37431566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 43244023 - 43244091
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||| |||||||||||||||||||| ||||| ||||||||| | |||  |||||||||| ||||    
T  43244023 attttttttgacaaaaataaacgatattcattcattcaaattgatagagtacaccgatacaatacaaat 43244091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 46268132 - 46268076
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||| | ||||||||||||||| | ||| ||||||||||| ||||    
T  46268132 aaaaataaacgatatttattcatttaaattgatagagtacatcgatacaatacaaat 46268076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 50274371 - 50274435
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||| |||||||||||||||| | ||||||||||| ||| | ||| | |||||||||||||||    
T  50274371 tttttaaaaaaataaacgatatttattcatttaaattaataaagtacattgatacaatataaatt 50274435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 6882418 - 6882355
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||| ||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  6882418 ttttgacaaaagtaaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 6882355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 24100607 - 24100544
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| ||||||||||| |||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  24100607 ttttgacaaaaataaatgatattcattcattcaaattgatagagtacatcgatacaatacaaat 24100544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 27091182 - 27091119
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||| | ||||| ||||||||| | ||| ||||||||||| ||||    
T  27091182 ttttgacaaaaataaacgatatttattcattcaaattgatagagtacatcgatacaatacaaat 27091119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 8517111 - 8517169
Alignment:
Q  128 acaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||||||| ||||| ||||||||| | ||| | ||||||||| ||||    
T  8517111 acaaaaataaacgatattcattcattcaaattgatagagtacattgatacaatacaaat 8517169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 23964116 - 23964058
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||||||||||||||||| ||||| ||||||| | | ||| | ||||||||||||||||    
T  23964116 aaaaataaacgatattcattcattcaaattgagataatacattgatacaatataaattt 23964058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 181
Target Start/End: Original strand, 56236478 - 56236536
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaata 181  Q
    |||| ||||||||||| |||||||| ||||| ||||||||| | ||| |||||||||||    
T  56236478 ttttgacaaaaataaatgatattcattcattcaaattgatagagtacatcgatacaata 56236536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 553
Target Start/End: Complemental strand, 49413 - 49368
Alignment:
Q  508 aattataccatgtgtaatcttggttacactctaaaatgacaaaatt 553  Q
    ||||| ||| ||| ||||||||||| ||||||||||||||||||||    
T  49413 aattacaccctgtttaatcttggttgcactctaaaatgacaaaatt 49368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 7242447 - 7242504
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    |||| ||||||||||| |||||||| | ||||||||||||| | ||| ||||||||||    
T  7242447 ttttgacaaaaataaatgatattcatttatttaaattgatagagtacatcgatacaat 7242504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 11209960 - 11210017
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    |||||||||||||||| |||||||| ||||| ||||||||| | ||| || |||||||    
T  11209960 tttttacaaaaataaaagatattcattcattcaaattgatagagtacatcaatacaat 11210017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 29266546 - 29266615
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||| |||||| ||||||||||||| ||||| ||||||||| | ||| | ||||||||| |||||    
T  29266546 atttattttgacaaaagtaaacgatattcattcattcaaattgatagagtacattgatacaatacaaatt 29266615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 35338749 - 35338684
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    ||||||||||||||||  ||||||| | ||||||||||||| | ||| | |||||||| |||||||    
T  35338749 tttttacaaaaataaattatattcatttatttaaattgatagagtacattgatacaatgtaaattt 35338684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 44374936 - 44374989
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgata 176  Q
    |||||||||||||||| |||||||| ||||| ||||||||| | ||| ||||||    
T  44374936 tttttacaaaaataaatgatattcattcattcaaattgatagagtacatcgata 44374989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 477668 - 477708
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgata 163  Q
    ||||||||||||||||||||||||| ||||| |||| ||||    
T  477668 tttttacaaaaataaacgatattcattcattcaaatcgata 477708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 3159436 - 3159372
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||| ||||| ||||||| ||||| ||||||||| | ||| ||||||||||| |||||    
T  3159436 ttttgacaaaattaaactatattcattcattcaaattgataaagtacatcgatacaatacaaatt 3159372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 3171271 - 3171335
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||||||| |||| ||||| | ||||| ||||||||| | ||||| ||||||||| |||||    
T  3171271 tttttacaaaaacaaacaatatttattcattcaaattgatatagtacgttgatacaatacaaatt 3171335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 6912154 - 6912090
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| ||||||||||||| |||||| ||||| ||||||||| | ||| || |||||||| |||||    
T  6912154 ttttgacaaaaataaacgttattcattcattcaaattgatagagtacatcaatacaatacaaatt 6912090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 7060781 - 7060725
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||||| ||||| ||||||||| | ||| | ||||||||| ||||    
T  7060781 aaaaataaacgatattcattcattcaaattgatagagtacattgatacaatacaaat 7060725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 26742119 - 26742159
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgata 163  Q
    |||||||||||||| |||||||||| ||||| |||||||||    
T  26742119 tttttacaaaaatatacgatattcattcattcaaattgata 26742159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 28837534 - 28837466
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||| ||||||||  |||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  28837534 atttttttttataaaaataactgatattcattcattcaaattgatagagtacatcgatacaatacaaat 28837466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 31994492 - 31994452
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgata 163  Q
    |||| |||||||||||||||||||| ||||| |||||||||    
T  31994492 ttttgacaaaaataaacgatattcactcattcaaattgata 31994452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 36123999 - 36124067
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||| |||||||||||||||||||| || || ||||||||| | | | ||||||||||| ||||    
T  36123999 attttttttaacaaaaataaacgatattcattctttcaaattgatagagtccatcgatacaatacaaat 36124067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 38545814 - 38545878
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||||||||||  |||||||| ||||| ||||||||| | ||| | |||||| ||||||||    
T  38545814 tttttacaaaaataagtgatattcattcattcaaattgatatagtacattgatacagtataaatt 38545878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 39797428 - 39797388
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgata 163  Q
    |||| |||| ||||||||||||||| |||||||||||||||    
T  39797428 ttttaacaagaataaacgatattcattcatttaaattgata 39797388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 46716555 - 46716619
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| ||||||||||| |||||||| ||||| ||||||||| | ||| |||||| ||| ||||||    
T  46716555 ttttgacaaaaataaatgatattcattcattcaaattgatatagtacatcgatataatgtaaatt 46716619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 51152581 - 51152526
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  51152581 aaaaataaacgatattca-tcattcaaattgataaagtacatcgatacaatacaaat 51152526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 9e-16; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 10305036 - 10304973
Alignment:
Q  124 ttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||||||| |||||||| ||||| ||||||||| ||||| |||||||||||||||||    
T  10305036 ttttacaaaaataaaggatattcattcattcaaattgatagattacatcgatacaatataaatt 10304973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 3233238 - 3233182
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||    
T  3233238 aaaaataaacgatattcattcattcaaattgatagattacatcgatacaatataaat 3233182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 42491343 - 42491279
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||||||||| ||||||| ||||| ||||||||| | ||| |||||||||||||||||    
T  42491343 tttttacaaaaataaacaatattcattcattcaaattgatagagtacatcgatacaatataaatt 42491279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 17348042 - 17347984
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||||||||||||||||| ||||||||||||||| | ||| |||||| |||||||||||    
T  17348042 aaaaataaacgatattcactcatttaaattgatagagtacatcgatataatataaattt 17347984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 25032750 - 25032814
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||| |||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| |||||    
T  25032750 tttttataaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatt 25032814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 4882024 - 4882087
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  4882024 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 4882087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 29205742 - 29205679
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  29205742 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaataaaaat 29205679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 37822010 - 37822073
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||||| ||| | ||||||||| | ||| ||||||||||| ||||    
T  37822010 tttttacaaaaataaacgatattcattcactcaaattgatagagtacatcgatacaatacaaat 37822073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 44517622 - 44517559
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  44517622 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 44517559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 44513663 - 44513720
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    |||||||||||||||| |||||||| |||||||||||| || | ||| ||||||||||    
T  44513663 tttttacaaaaataaaagatattcattcatttaaattggtagagtacatcgatacaat 44513720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 51418458 - 51418394
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||| ||||||||||||| ||||||||||||||| | ||| |||||| |||| |||||    
T  51418458 ttttgacaaaagtaaacgatattcattcatttaaattgatagagtacatcgatataatacaaatt 51418394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 900503 - 900440
Alignment:
Q  124 ttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||||||||||  ||||||| ||||| ||||||||| | ||| |||||||||| ||||||    
T  900503 ttttacaaaaataaattatattcattcattcaaattgatagagtacatcgatacaatgtaaatt 900440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 12872080 - 12872017
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| | ||||||||| ||||    
T  12872080 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacattgatacaatacaaat 12872017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 16141085 - 16141022
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||  ||||||||| | ||| ||||||||||| ||||    
T  16141085 ttttgacaaaaataaacgatattcattcatccaaattgatagagtacatcgatacaatacaaat 16141022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 28677786 - 28677849
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| | ||| ||||||||| | ||| ||||||||||| ||||    
T  28677786 ttttgacaaaaataaacgatattcatttattcaaattgatagagtacatcgatacaatacaaat 28677849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 32879167 - 32879104
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||| ||| ||||| ||||||||  | ||| ||||||||||| ||||    
T  32879167 tttttacaaaaataaacgataatcattcattcaaattgatttagtacatcgatacaatacaaat 32879104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 33703178 - 33703229
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaata 181  Q
    |||||||||||||||||| || |||||||||||| | ||| |||||||||||    
T  33703178 aaaaataaacgatattcattcgtttaaattgatagagtacatcgatacaata 33703229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 2486379 - 2486329
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacatta 168  Q
    |||| |||||| |||||||||||||||| | ||||||||||||||| ||||    
T  2486379 atttatttttataaaaataaacgatatttattcatttaaattgataaatta 2486329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 34659305 - 34659359
Alignment:
Q  126 ttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    ||||||||||||| |||||||| ||||| ||||||||| | ||| ||||||||||    
T  34659305 ttacaaaaataaatgatattcattcattcaaattgatagagtacatcgatacaat 34659359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 187
Target Start/End: Complemental strand, 1141153 - 1141088
Alignment:
Q  122 gtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||| |||||||||||||||||||| || ||||||| |||| | ||| || ||| ||||||||||    
T  1141153 gttttgacaaaaataaacgatattcattcttttaaatcgatagaatacatcaatataatataaatt 1141088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 11121425 - 11121372
Alignment:
Q  127 tacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    |||||||||||| |||||||| ||||| ||||||||| | ||| ||||||||||    
T  11121425 tacaaaaataaatgatattcattcattcaaattgatagaatacatcgatacaat 11121372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 13969301 - 13969358
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    |||| ||||||||||| |||||||| ||||| ||||||||| | ||| ||||||||||    
T  13969301 ttttgacaaaaataaatgatattcattcattcaaattgatagaatacatcgatacaat 13969358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 26771552 - 26771495
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||| |||||||| ||||| ||||||||| | ||| ||||||||||| |||||    
T  26771552 aaaaataaatgatattcattcattcaaattgatagagtacatcgatacaatacaaatt 26771495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 46589601 - 46589544
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    |||| ||||||||||| |||||||| ||||| ||||||||| | ||| ||||||||||    
T  46589601 ttttgacaaaaataaatgatattcattcattcaaattgatagagtacatcgatacaat 46589544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 15790923 - 15790987
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| ||||||||||| |||||||| | ||| ||||||||| | ||| ||||||||||| |||||    
T  15790923 ttttgacaaaaataaaagatattcatttattcaaattgataaagtacatcgatacaatacaaatt 15790987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 22031763 - 22031827
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||||||||||  |||||||| ||||| ||||||||| | ||| || |||||||| |||||    
T  22031763 tttttacaaaaataattgatattcattcattcaaattgatagagtacatcaatacaatacaaatt 22031827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 26200033 - 26199993
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgata 163  Q
    |||| |||||||||||||||||||| ||||| |||||||||    
T  26200033 ttttgacaaaaataaacgatattcattcattcaaattgata 26199993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 30678713 - 30678649
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||||||||||||||||| ||  | ||||||||| | ||  ||||||||||| |||||    
T  30678713 tttttacaaaaataaacgatattcattccatcaaattgatagaatatatcgatacaatacaaatt 30678649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 30853609 - 30853665
Alignment:
Q  124 ttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    ||||||||||||||| |||||||| | ||| ||||||||| | ||| ||||||||||    
T  30853609 ttttacaaaaataaatgatattcatttattcaaattgatataatacatcgatacaat 30853665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 33486690 - 33486746
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||| |||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  33486690 aaaaaaaaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 33486746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 3369 - 3304
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||||||||||    
T  3369 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatataaattt 3304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 34431543 - 34431475
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| ||||||||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  34431543 atttttttttacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 34431475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 39531055 - 39531114
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatat 182  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||||    
T  39531055 tttttacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatat 39531114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 188
Target Start/End: Original strand, 9196679 - 9196743
Alignment:
Q  124 ttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||||||||||||||||||||||| ||||| ||||||||| | ||| | |||| |||||||||||    
T  9196679 ttttacaaaaataaacgatattcattcattcaaattgatagagtacattgatataatataaattt 9196743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 11734492 - 11734556
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| |||||    
T  11734492 ttttgacaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatt 11734556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 26294084 - 26294020
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||||||||||||||||| ||||| |||| |||| | ||||||||||||||| |||||    
T  26294084 ttttgacaaaaataaacgatattcattcattcaaatagatagagtacgtcgatacaatacaaatt 26294020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 32309970 - 32309906
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||||||||||||||| | ||||| ||||||||| | ||| |||||| ||||||||||    
T  32309970 tttttacaaaaataaacgatattgattcattcaaattgatagagtacatcgatataatataaatt 32309906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 42505060 - 42505124
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||| || |||||||| |||||    
T  42505060 tttttacaaaaataaacgatattcattcattcaaattgatagagtacatcaatacaatacaaatt 42505124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 128 - 187
Target Start/End: Complemental strand, 6635717 - 6635658
Alignment:
Q  128 acaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||||||| |||| ||||| ||||||||| | ||| |||||||||||||||||    
T  6635717 acaaaaataaacgattttcattcattcaaattgatagagtacatcgatacaatataaatt 6635658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 7771468 - 7771531
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||| | ||||| ||||||||| | ||| ||||||||||| ||||    
T  7771468 tttttacaaaaataaacgatatttattcattcaaattgatatagtacatcgatacaatacaaat 7771531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 17331802 - 17331739
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  17331802 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 17331739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 18654256 - 18654193
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||| ||||||||| ||||| ||||||||| | ||| | ||||||||||||||    
T  18654256 tttttacaaaaataagcgatattcattcattcaaattgatagactacattgatacaatataaat 18654193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 23881763 - 23881826
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  23881763 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 23881826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 39179492 - 39179555
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  39179492 ttttgacaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaat 39179555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 17095888 - 17095952
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||||||||||| ||||| ||||| ||||||||| | ||| ||||||||||| |||||    
T  17095888 ttttgacaaaaataaacgacattcattcattcaaattgatagagtacatcgatacaatacaaatt 17095952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 6681524 - 6681587
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| |||||  |||||||| | ||| ||||||||||| ||||    
T  6681524 ttttgacaaaaataaacgatattcattcattctaattgatagagtacatcgatacaatacaaat 6681587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 17732034 - 17732097
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| ||||||||||| |||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  17732034 ttttgacaaaaataaatgatattcactcattcaaattgatagagtacatcgatacaatacaaat 17732097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 20483660 - 20483597
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||||| ||||| ||||| ||| | ||| |||||| |||| ||||    
T  20483660 tttttacaaaaataaacgatattcattcattcaaattaatagagtacatcgatataatacaaat 20483597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 26294721 - 26294784
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||||| |||||| ||||| ||||||||| | ||  ||||||||||| ||||    
T  26294721 tttttacaaaaataaacggtattcattcattcaaattgatagagtatatcgatacaatacaaat 26294784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 17325324 - 17325390
Alignment:
Q  123 tttttaca-aaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||||||| |||| |||||||||||| ||||| ||||||||| ||||| ||||| ||||| ||||||    
T  17325324 tttttacacaaaacaaacgatattcattcattcaaattgatagattacatcgatgcaatacaaattt 17325390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 42396158 - 42396220
Alignment:
Q  124 ttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||| |||||||||||||||||| ||||| ||||||||| | ||  ||||||||||| ||||    
T  42396158 ttttataaaaataaacgatattcattcattcaaattgatagaatatatcgatacaatacaaat 42396220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 17218169 - 17218112
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||| |||||||| ||||| ||||||||| | ||| ||||||||||| |||||    
T  17218169 aaaaataaatgatattcattcattcaaattgatagagtacatcgatacaataaaaatt 17218112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 28662523 - 28662466
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    |||| |||||||||||| ||||||| ||||| ||||||| | | ||||||||||||||    
T  28662523 ttttgacaaaaataaacaatattcattcattcaaattgaaagagtacgtcgatacaat 28662466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 37219455 - 37219398
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| | ||| | ||||||||    
T  37219455 tttttacaaaaataaacgaaattcattcattcaaattgatagagtacattgatacaat 37219398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 40775214 - 40775157
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    |||| ||||||||||| |||||||| ||||| ||||||||| | ||| ||||||||||    
T  40775214 ttttgacaaaaataaatgatattcattcattcaaattgatagagtacatcgatacaat 40775157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 7151270 - 7151230
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgata 163  Q
    ||||||||||||||||||||||||| ||||| |||| ||||    
T  7151270 tttttacaaaaataaacgatattcattcattaaaatcgata 7151230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 28540683 - 28540723
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgata 163  Q
    |||||||||||| ||| |||||||| |||||||||||||||    
T  28540683 tttttacaaaaagaaaggatattcattcatttaaattgata 28540723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 33164116 - 33164180
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||||||||||||||||| ||||| ||||||| | | ||| |||||| |||| |||||    
T  33164116 ttttgacaaaaataaacgatattcattcattcaaattgacagagtacatcgatataatacaaatt 33164180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 29543267 - 29543203
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| |||||    
T  29543267 tttttacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatt 29543203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 18089059 - 18089122
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  18089059 tttttacaaaaataaacgatattcattcattcaaattgatatagtacatcgatacaatacaaat 18089122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 20560780 - 20560843
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  20560780 tttttacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 20560843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 35333979 - 35333916
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  35333979 tttttacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 35333916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 13548570 - 13548624
Alignment:
Q  127 tacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaata 181  Q
    ||||||||||||||||||||| ||||||||||||||| | ||| |||||||||||    
T  13548570 tacaaaaataaacgatattcattcatttaaattgatatagtacatcgatacaata 13548624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 33012522 - 33012457
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||||    
T  33012522 ttttaacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattt 33012457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 3527465 - 3527397
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  3527465 attttttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 3527397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 13113485 - 13113421
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||||||||||||||| | ||||||||||||||| | ||| |||||| ||||||||||    
T  13113485 ttttgacaaaaataaacgatatttattcatttaaattgatagaatacatcgatataatataaatt 13113421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 13878651 - 13878719
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  13878651 attttttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 13878719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 14018776 - 14018844
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  14018776 attttttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 14018844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 25068315 - 25068252
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  25068315 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 25068252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 11798180 - 11798242
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    |||| |||| |||| ||||||||||||||| ||||||||||||||| | ||| ||||||||||    
T  11798180 attttttttgacaacaataaacgatattcattcatttaaattgatagagtacatcgatacaat 11798242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 15920333 - 15920263
Alignment:
Q  117 catttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||| |||| ||||||||||| |||||||| ||||| ||||||||| | ||| ||||||||||| |||||    
T  15920333 cattttttttgacaaaaataaatgatattcattcattcaaattgatagagtacatcgatacaatacaaatt 15920263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 17054712 - 17054776
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||||||||||||||| |||||||| | ||||||||||||| |||||  |||||||||| ||||||    
T  17054712 tttttacaaaaataaa-gatattcatttatttaaattgatatattacaccgatacaataaaaattt 17054776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 17767212 - 17767257
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgata 163  Q
    |||| ||||||||| ||||||||||||||| |||||||||||||||    
T  17767212 atttttttttacaacaataaacgatattcattcatttaaattgata 17767257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 28230739 - 28230808
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| ||||||||||||||||||||||||  ||||| |||||| || | ||| ||||||||||| |||||    
T  28230739 atttttttttacaaaaataaacgatattcgttcattcaaattgttagagtacatcgatacaatacaaatt 28230808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 36868482 - 36868417
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||  |||||| |||||||||||    
T  36868482 ttttgacaaaaataaacgatattcattcattcaaattgatagagtatatcgatataatataaattt 36868417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 11942846 - 11942778
Alignment:
Q  119 tttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||| |||||| ||||||||||||| ||||| |||| |||| | |||||||||| |||| |||||    
T  11942846 tttgttttgacaaaagtaaacgatattcattcattcaaatcgatagagtacgtcgatataatacaaatt 11942778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 25622705 - 25622769
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| ||||||||||| || ||||| ||||||||||||||| | ||| |||||||||| ||||||    
T  25622705 ttttgacaaaaataaatgacattcattcatttaaattgatagagtacatcgatacaatgtaaatt 25622769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 38384113 - 38384177
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||||||||||||||||| ||||| ||||||||| |  || ||||||||||| |||||    
T  38384113 ttttgacaaaaataaacgatattcattcattcaaattgataaagcacatcgatacaatacaaatt 38384177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 43696347 - 43696279
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||| |||||||||||||||||||| ||||| ||||||||| | ||| || |||||||| ||||    
T  43696347 attttttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcaatacaatacaaat 43696279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 4739803 - 4739740
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||| ||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  4739803 ttttgacaaaagtaaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 4739740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 9689637 - 9689696
Alignment:
Q  128 acaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||||||||| || ||||||||||||||| | ||| |||||| |||| |||||    
T  9689637 acaaaaataaacgatatacattcatttaaattgatagagtacatcgatataatacaaatt 9689696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 12705160 - 12705097
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||| ||||||||| |||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  12705160 tttttataaaaataaaggatattcattcattcaaattgatagagtacatcgatacaatacaaat 12705097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 12890764 - 12890827
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| | ||| ||||||||| | ||| ||||||||||| ||||    
T  12890764 ttttgacaaaaataaacgatattcattaattcaaattgatagagtacatcgatacaatacaaat 12890827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 16136552 - 16136489
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| |||||| |||| ||||    
T  16136552 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatataatacaaat 16136489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 28261552 - 28261615
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||| ||||||||||| ||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  28261552 tttttgcaaaaataaacaatattcattcattcaaattgatagagtacatcgatacaatacaaat 28261615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 32015727 - 32015664
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||| |||||||||||||| ||||| ||||||||| | ||| |||||| |||| ||||    
T  32015727 tttttacaaagataaacgatattcattcattcaaattgatagagtacatcgatataatacaaat 32015664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 34416410 - 34416473
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| |||||  |||||||| | ||| ||||||||||| ||||    
T  34416410 ttttgacaaaaataaacgatattcattcattcgaattgatagagtacatcgatacaatacaaat 34416473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 44942752 - 44942697
Alignment:
Q  131 aaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  44942752 aaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 44942697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 17073146 - 17073210
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||||||||||||||| |||||||  | ||||||||||||| |||||  |||||||||| ||||||    
T  17073146 tttttacaaaaataaa-gatattcttttatttaaattgatatattacaccgatacaatacaaattt 17073210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 40038973 - 40039034
Alignment:
Q  126 ttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||||||||||| || ||||| | ||||||| | ||| ||||||||||| |||||    
T  40038973 ttacaaaaataaacgatatccattcattcatattgataaagtacatcgatacaataaaaatt 40039034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 40125838 - 40125781
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    |||||||||||||||| |||||||| ||||| ||||||||| | ||| | ||||||||    
T  40125838 tttttacaaaaataaatgatattcattcattcaaattgatagagtacatagatacaat 40125781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 4703605 - 4703541
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||||||||||||||||| ||||  ||||||| | | ||| ||||||||||| |||||    
T  4703605 ttttgacaaaaataaacgatattcattcatccaaattgacagagtacatcgatacaatacaaatt 4703541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 5754748 - 5754692
Alignment:
Q  131 aaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||||||||| ||||| ||||||||| | ||| |||||| |||| |||||    
T  5754748 aaaataaacgatattcattcattcaaattgatagaatacatcgatataatacaaatt 5754692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 7639990 - 7640030
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgata 163  Q
    |||| ||||||||||| |||||||| |||||||||||||||    
T  7639990 ttttgacaaaaataaatgatattcattcatttaaattgata 7640030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 17304188 - 17304244
Alignment:
Q  132 aaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||||||||||||||| | ||| ||||||||| | ||  ||||||||||||||||||    
T  17304188 aaataaacgatattcatttattcaaattgatataatatatcgatacaatataaattt 17304244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 26491749 - 26491697
Alignment:
Q  128 acaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    ||||||| |||||||||||| ||||| ||||||||| | ||| ||||||||||    
T  26491749 acaaaaacaaacgatattcattcattcaaattgatagaatacatcgatacaat 26491697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 27096163 - 27096099
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||||||||||||||||| ||||| ||||||||  | ||| | ||||||||| |||||    
T  27096163 ttttgacaaaaataaacgatattcattcattcaaattgatggagtacatagatacaatacaaatt 27096099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 44482525 - 44482588
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||| |||||| |||||||||    
T  44482525 tttttacaaaaataaacgatattcattcattcaaattgatagagtacatcgatataatataaat 44482588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 48304039 - 48304102
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  48304039 tttttacaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaat 48304102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 4621027 - 4621084
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    ||||||||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||    
T  4621027 tttttacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaat 4621084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 186
Target Start/End: Original strand, 24319872 - 24319933
Alignment:
Q  125 tttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||| ||||||||||||||| | ||| ||||||||||| ||||    
T  24319872 tttataaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatacaaat 24319933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 39989836 - 39989901
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||||||||||||||| ||||||||  |||| ||||||||| | |||||| |||||||||||||||    
T  39989836 tttttacaaaaataaatgatattcatgcattcaaattgatagagtacgtcaatacaatataaattt 39989901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 37593557 - 37593494
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||||||| ||||| ||||||||  | ||| ||||||||||| ||||    
T  37593557 tttttacaaaaataaacgatattcattcattcaaattgatggagtacatcgatacaatacaaat 37593494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 46025702 - 46025765
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  46025702 ttttgacaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaat 46025765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 21991131 - 21991073
Alignment:
Q  128 acaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  21991131 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 21991073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 11833485 - 11833428
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| |||||    
T  11833485 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatt 11833428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 31254785 - 31254842
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||| |||||||| ||||| ||||||||| ||||| ||||||||||| |||||    
T  31254785 aaaaataaaggatattcattcattcaaattgatagattacatcgatacaatacaaatt 31254842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 34871136 - 34871205
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| ||||||||||| ||||||||||||| | ||  ||||||||| | ||| |||||||||||||||||    
T  34871136 atttttttttacaaaagtaaacgatattcatttatacaaattgatagagtacatcgatacaatataaatt 34871205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 3266848 - 3266784
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||||||||| ||||||| ||||| ||||||||| | ||| | ||||||||| |||||    
T  3266848 tttttacaaaaataaacaatattcattcattcaaattgataaagtacattgatacaatacaaatt 3266784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 6667869 - 6667805
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||||||||||||||||| ||||| ||||||||| |  || ||||||||||| |||||    
T  6667869 ttttgacaaaaataaacgatattcattcattcaaattgatagagcacatcgatacaatacaaatt 6667805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 26017319 - 26017383
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| ||||||||||| |||||||| ||||| ||||||||| | ||| |||||| ||||||||||    
T  26017319 ttttgacaaaaataaatgatattcattcattcaaattgatagagtacatcgatataatataaatt 26017383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 27535894 - 27535838
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||| | ||||||||||||||| | ||| ||||||||||| ||||    
T  27535894 aaaaataaacgatatttattcatttaaattgatagagtacatcgatacaatacaaat 27535838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 36253409 - 36253341
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||| |||||||||||||||| ||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  36253409 attttttttgacaaaaataaacgatactcattcattcaaattgatagagtacatcgatacaatacaaat 36253341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 39532622 - 39532686
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||||||||||||||| | ||||| ||||||||| | |||  |||||||||| |||||    
T  39532622 tttttacaaaaataaacgatattaattcattcaaattgatagagtacaccgatacaatacaaatt 39532686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 39707742 - 39707702
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgata 163  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  39707742 tttttacaaaaataaacgatattcattcattcaaattgata 39707702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 41288430 - 41288366
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||||||||||||||||  ||||| ||||||||| | ||| ||||||||||| |||||    
T  41288430 ttttgacaaaaataaacgatattctttcattcaaattgatagagtacatcgatacaatacaaatt 41288366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 2623066 - 2623003
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| || ||| |||||||||    
T  2623066 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatctatataatataaat 2623003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 9785791 - 9785728
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| ||||| |||||||||   ||| ||||||||||| ||||    
T  9785791 ttttgacaaaaataaacgatattcattcattcaaattgatagggtacatcgatacaatacaaat 9785728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 186
Target Start/End: Complemental strand, 38277267 - 38277208
Alignment:
Q  127 tacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||||||||||||||||| ||||| ||||||||| | ||| | ||||| ||||||||    
T  38277267 tacaaaaataaacgatattcattcattcaaattgatagagtacattgatacgatataaat 38277208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 187
Target Start/End: Original strand, 42603435 - 42603490
Alignment:
Q  132 aaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||| |||| ||||| ||||||||| | ||| |||||||||||||||||    
T  42603435 aaataaacgatgttcattcattcaaattgatagagtacatcgatacaatataaatt 42603490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 43369544 - 43369591
Alignment:
Q  123 tttttacaaaaataaa-cgatattcaatcatttaaattgatacattac 169  Q
    |||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  43369544 tttttacaaaaataaaacgatattcattcatttaaattgatagattac 43369591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 21603930 - 21603868
Alignment:
Q  125 tttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||| ||||||||||| ||||| ||||||||| | ||| || |||||||| |||||    
T  21603930 tttacaaaaattaacgatattcattcattcaaattgatagagtacatcaatacaatacaaatt 21603868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 161
Target Start/End: Complemental strand, 37714938 - 37714900
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattga 161  Q
    |||||| |||||||||||||||||| |||||||||||||    
T  37714938 tttttaaaaaaataaacgatattcattcatttaaattga 37714900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 48643473 - 48643527
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatac 177  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| |||||||    
T  48643473 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatac 48643527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 7765524 - 7765589
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatt-taaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||||||||||||||||| | |||  ||||||||| | ||| ||||||||||| |||||    
T  7765524 tttttacaaaaataaacgatattcattaattcaaaattgatagagtacatcgatacaatacaaatt 7765589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 16273834 - 16273777
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    |||||||||||||||| |||||||| ||||| |||||| || | ||| ||||||||||    
T  16273834 tttttacaaaaataaaagatattcattcattcaaattggtagagtacatcgatacaat 16273777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 28664603 - 28664660
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    |||||||||||||||||||||| ||   ||| ||||||||| ||||| ||||||||||    
T  28664603 tttttacaaaaataaacgatatccatctattcaaattgatagattacatcgatacaat 28664660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Original strand, 33095783 - 33095836
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgata 176  Q
    ||||||||||||||||||||||||| ||||| |||| |||| | ||| ||||||    
T  33095783 tttttacaaaaataaacgatattcattcattcaaatcgataaaatacatcgata 33095836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 34893560 - 34893503
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    |||||||||||||||| |||||||| ||||| ||||||||| | ||| ||||| ||||    
T  34893560 tttttacaaaaataaatgatattcattcattcaaattgatagagtacatcgatgcaat 34893503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 37890151 - 37890208
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    ||||||||||||| || |||||||| ||||| ||||||||| | ||| ||||||||||    
T  37890151 tttttacaaaaatcaatgatattcattcattcaaattgatatagtacatcgatacaat 37890208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 10624249 - 10624217
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgat 162  Q
    |||||||||||||||||| ||||||||||||||    
T  10624249 aaaaataaacgatattcattcatttaaattgat 10624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 21954487 - 21954543
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||||| | ||| ||||||||| | ||| ||| ||||||||||||    
T  21954487 aaaaataaacgatattcatttattaaaattgatagactacatcgttacaatataaat 21954543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 22747168 - 22747220
Alignment:
Q  135 taaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||| | ||||| ||||||||| | ||| |||||||||||||||||    
T  22747168 taaacgatattgattcattcaaattgatagagtacatcgatacaatataaatt 22747220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 25112955 - 25112899
Alignment:
Q  129 caaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaa 185  Q
    ||||||||||||||| ||| ||||| ||| ||||| | ||| |||||||||||||||    
T  25112955 caaaaataaacgatagtcattcattcaaaatgatagagtacatcgatacaatataaa 25112899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 33901974 - 33902014
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgata 163  Q
    |||||||| |||||||||||||||| ||| |||||||||||    
T  33901974 tttttacacaaataaacgatattcattcacttaaattgata 33902014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 35133261 - 35133221
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgata 163  Q
    |||||||||||||||| |||||||| ||||| |||||||||    
T  35133261 tttttacaaaaataaaggatattcattcattcaaattgata 35133221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 39090541 - 39090485
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaa 179  Q
    |||| ||||||||||| |||||||| ||||| ||||||||| | ||||| |||||||    
T  39090541 ttttgacaaaaataaatgatattcattcattcaaattgataaagtacgttgatacaa 39090485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 184
Target Start/End: Complemental strand, 5526276 - 5526215
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataa 184  Q
    ||||||||||||||||||||||| | ||||| ||||||||| | ||| ||||||||||||||    
T  5526276 tttttacaaaaataaacgatatttattcattcaaattgatagagtacatcgatacaatataa 5526215  T

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Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 13570422 - 13570487
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||| |||||||||||||||||||| ||||||||||||||| | ||  ||||||||||| ||||||    
T  13570422 ttttgacaaaaataaacgatattcattcatttaaattgatagagtatatcgatacaatacaaattt 13570487  T

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Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 10148410 - 10148347
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||| ||||||| ||||| ||||||||| ||||| ||||||||||| ||||    
T  10148410 ttttaacaaaaataaacaatattcattcattcaaattgatagattacatcgatacaatacaaat 10148347  T

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Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 186
Target Start/End: Original strand, 24790830 - 24790888
Alignment:
Q  128 acaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  24790830 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 24790888  T

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Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 37613107 - 37613046
Alignment:
Q  126 ttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||||||||||||||||| ||||| ||||||||| | ||  ||||||||||| |||||    
T  37613107 ttacaaaaataaacgatattcattcattcaaattgatagagtatatcgatacaatacaaatt 37613046  T

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Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 38545478 - 38545535
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||||||||||||| ||||| ||||||||| | ||  |||||||||||||||||    
T  38545478 aaaaataaacgatattcattcattcaaattgatagagtatatcgatacaatataaatt 38545535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 2234125 - 2234189
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||||||||||||||||| ||||| ||||||||| | ||| |||||| |||| |||||    
T  2234125 ttttgacaaaaataaacgatattcattcattcaaattgatagagtacatcgatataatacaaatt 2234189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 187
Target Start/End: Complemental strand, 5457520 - 5457460
Alignment:
Q  127 tacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||||||| |||||||| ||||| ||||||||| | ||| |||||| ||||||||||    
T  5457520 tacaaaaataaatgatattcattcattcaaattgatagagtacatcgatataatataaatt 5457460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 9502042 - 9501978
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| |||||| ||||||||||||| ||||| ||||||||| | ||| ||||||||||| |||||    
T  9502042 ttttgacaaaagtaaacgatattcattcattcaaattgatagagtacatcgatacaatacaaatt 9501978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 187
Target Start/End: Complemental strand, 10334950 - 10334886
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||||||||||||||||| || ||||| ||||||||| | ||| | |||||||| ||||||    
T  10334950 tttttacaaaaataaacgatatccattcattcaaattgatagagtacattgatacaatgtaaatt 10334886  T

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Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 15286687 - 15286727
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgata 163  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  15286687 tttttacaaaaataaatgatattcattcatttaaattgata 15286727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 15467056 - 15467096
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgata 163  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  15467056 tttttacaaaaataaatgatattcattcatttaaattgata 15467096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 20993261 - 20993201
Alignment:
Q  128 acaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||||||||||| ||||||| ||||| ||||||||| ||| | |||||| |||||||||||    
T  20993261 acaaaaataaactatattcattcattcaaattgatagattgcatcgatataatataaattt 20993201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 181
Target Start/End: Complemental strand, 2968982 - 2968931
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaata 181  Q
    |||||||||||||||||| ||||| ||||||||| | ||| |||||||||||    
T  2968982 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaata 2968931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 7579510 - 7579573
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||| |||| |||||||| ||||| ||||||||| | ||| ||||||||||||||||    
T  7579510 ttttgacaaaactaaatgatattcattcattcaaattgatagagtacatcgatacaatataaat 7579573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 181
Target Start/End: Original strand, 13575871 - 13575922
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaata 181  Q
    ||||||| |||||||||| ||||||||||||||| | ||| |||||||||||    
T  13575871 aaaaatagacgatattcattcatttaaattgatagagtacatcgatacaata 13575922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 181
Target Start/End: Original strand, 23970838 - 23970901
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaata 181  Q
    |||| |||||||||||||||||||||| || || || ||||||||| | ||| |||||||||||    
T  23970838 atttttttttacaaaaataaacgatatacattcgttcaaattgatagagtacatcgatacaata 23970901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Complemental strand, 26912101 - 26912038
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||||||||||||||||| || |||||||||||| | |||  | |||||||||||||    
T  26912101 ttttaacaaaaataaacgatattcattcttttaaattgataaagtacaacaatacaatataaat 26912038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 28296770 - 28296833
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    ||||||| |||||||| |||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  28296770 tttttaccaaaataaatgatattcattcattcaaattgatagagtacatcgatacaatacaaat 28296833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 1809901 - 1809951
Alignment:
Q  131 aaaataaacgatattcaatcatttaaattgatacattacgtcgatacaata 181  Q
    ||||||||||||||||| ||||| ||||||||| | ||| |||||||||||    
T  1809901 aaaataaacgatattcattcattcaaattgatagagtacatcgatacaata 1809951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 31202917 - 31202859
Alignment:
Q  128 acaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||||||| ||||| ||||||||| | ||| |||||| |||| ||||    
T  31202917 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatataatacaaat 31202859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 14600353 - 14600418
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||| |||||||||||||||||| | ||||| ||||| ||| | ||| ||||||||||| ||||||    
T  14600353 ttttgacaaaaataaacgatatttattcattcaaattaatagagtacatcgatacaatacaaattt 14600418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 16937000 - 16937057
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaat 180  Q
    |||||||||||||||| |||||||| ||||| |||||| || | ||| ||||||||||    
T  16937000 tttttacaaaaataaaagatattcattcattcaaattggtagagtacatcgatacaat 16937057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 27989136 - 27989079
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||||| ||||| | | ||||||||||||| | ||| |||||||||||||||||    
T  27989136 aaaaataaacaatatttatttatttaaattgatagagtacatcgatacaatataaatt 27989079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 28046438 - 28046381
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||||| ||||| | | ||||||||||||| | ||| |||||||||||||||||    
T  28046438 aaaaataaacaatatttatttatttaaattgatagagtacatcgatacaatataaatt 28046381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 39067345 - 39067410
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||| |||||||||||||||||||| || |||||||||||| | ||  ||||||| ||| ||||||    
T  39067345 ttttgacaaaaataaacgatattcattcttttaaattgatagagtatatcgatactatacaaattt 39067410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 187
Target Start/End: Complemental strand, 41362200 - 41362143
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||||||||||||| ||||| ||||||||| | ||| || |||||||| |||||    
T  41362200 aaaaataaacgatattcattcattcaaattgatagagtacatcaatacaatacaaatt 41362143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 187
Target Start/End: Original strand, 43936830 - 43936899
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| ||||||||||||||||||||||| | |||||  |||||||| | ||  ||||||||||| |||||    
T  43936830 atttttttttacaaaaataaacgatatttattcattcgaattgatagagtagatcgatacaatacaaatt 43936899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 8054469 - 8054533
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||| ||||||||||| |||||||| ||||| ||||||||| | ||| |||||| |||| |||||    
T  8054469 ttttaacaaaaataaatgatattcattcattcaaattgatagaatacatcgatataatacaaatt 8054533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 11967996 - 11968028
Alignment:
Q  131 aaaataaacgatattcaatcatttaaattgata 163  Q
    ||||||||||||||||| |||||||||||||||    
T  11967996 aaaataaacgatattcattcatttaaattgata 11968028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 186
Target Start/End: Complemental strand, 74643 - 74575
Alignment:
Q  118 atttgtttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||| |||||||||||||||||||| | ||||||||||||| | ||| ||||||||||| ||||    
T  74643 attttttttgacaaaaataaacgatattcatttatttaaattgatagagtacatcgatacaatacaaat 74575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 403895 - 403959
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    ||||||||||||||||||||||||| ||||| ||||| ||| | ||| ||||||||||| |||||    
T  403895 tttttacaaaaataaacgatattcattcattcaaattaatagagtacatcgatacaatacaaatt 403959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 35544 - 35486
Alignment:
Q  128 acaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  35544 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 35486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 130 - 187
Target Start/End: Original strand, 2102 - 2159
Alignment:
Q  130 aaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaatt 187  Q
    |||||||||||||||||| ||||| ||||||||| | ||| ||||||||||| |||||    
T  2102 aaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaatt 2159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 3714 - 3777
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaat 186  Q
    |||| |||||| ||||||||||||| ||||| ||||||||| | ||| ||||||||||| ||||    
T  3714 ttttgacaaaagtaaacgatattcattcattcaaattgatagagtacatcgatacaatacaaat 3777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 187
Target Start/End: Original strand, 6776 - 6841
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcattt-aaattgatacattacgtcgatacaatataaatt 187  Q
    |||| ||||| |||||||||||||| |||||| ||||||||| | ||| ||||||||||| |||||    
T  6776 ttttgacaaatataaacgatattcattcatttcaaattgatagagtacatcgatacaatacaaatt 6841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 11215 - 11280
Alignment:
Q  123 tttttacaaaaataaacgatattcaatcatttaaattgatacattacgtcgatacaatataaattt 188  Q
    |||| ||||||||||| |||||| | ||||||||||||||| | ||  ||||||||||| ||||||    
T  11215 ttttaacaaaaataaatgatattaattcatttaaattgatagagtatatcgatacaataaaaattt 11280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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