View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1765_high_4 (Length: 269)
Name: NF1765_high_4
Description: NF1765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1765_high_4 |
 | |
|
| [»] scaffold0091 (1 HSPs) |
| | |
|
| [»] scaffold0482 (1 HSPs) |
| | |
|
| [»] scaffold0753 (2 HSPs) |
| | |
|
| [»] scaffold0135 (7 HSPs) |
| | |
|
| [»] scaffold0206 (2 HSPs) |
| | |
|
| [»] scaffold0959 (1 HSPs) |
| | |
|
| [»] scaffold0186 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 5 - 255
Target Start/End: Original strand, 5382826 - 5383076
Alignment:
| Q |
5 |
agaacctacaagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtt |
104 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
5382826 |
agaacctccaagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataacttattcatgaattggtt |
5382925 |
T |
|
| Q |
105 |
tctcttcaaagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttga |
204 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
5382926 |
tctcttcaaagttgattctaatcattttgatgaaatgatgagactgatttcgagtgtaatatgcatcctcatcatgagaacattctttcatcggagttga |
5383025 |
T |
|
| Q |
205 |
taatgttctcttctatgacaatatattcttggttaattaacattgaattat |
255 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
5383026 |
taatgttctcttctatgacaatatattcttcgttaattaaccttgaattat |
5383076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 13 - 220
Target Start/End: Original strand, 26907841 - 26908047
Alignment:
| Q |
13 |
caagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttca |
112 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||| ||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
26907841 |
caagcatatgatcatgaattttcttctatgatatttctccaatcaatatcattaatgaatgacttaataaataattcattcatgatttggtttctcttca |
26907940 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttc |
212 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
26907941 |
aagttgattctgatcattttgatgaaatgatgaga-taattttgagtgtaatatgcatcttcatcatgagaaccttctttcatcggagttgataatgttt |
26908039 |
T |
|
| Q |
213 |
tcttctat |
220 |
Q |
| |
|
|||||||| |
|
|
| T |
26908040 |
tcttctat |
26908047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 35756022 - 35756228
Alignment:
| Q |
14 |
aagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaa |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| | ||||||||| ||||| ||| ||||||||||||| |||||||||||| |||||||| || |
|
|
| T |
35756022 |
aagcatatgatcatgaattttcttctttgatcattctcagatcaatatcataaatgaatgacttaataaataattcattcatgaattgatttctctttaa |
35756121 |
T |
|
| Q |
114 |
agttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttct |
213 |
Q |
| |
|
|| |||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | |
|
|
| T |
35756122 |
agctgattctaatcatttttatgaaatgatgagaataatttctagtgtaatatgcatcctcatcatgaaaacattctttcatcggagttgataatgtttt |
35756221 |
T |
|
| Q |
214 |
cttctat |
220 |
Q |
| |
|
||||||| |
|
|
| T |
35756222 |
cttctat |
35756228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 23550440 - 23550237
Alignment:
| Q |
14 |
aagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaa |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| | ||||||||| ||||| ||| ||||||||||||| |||||||||||| ||| |||| || |
|
|
| T |
23550440 |
aagcatatgatcatgaattttcttctttgatcattctccgatcaatatcataaatgaatgacttaataaataattcattcatgaattgatttatctttaa |
23550341 |
T |
|
| Q |
114 |
agttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttct |
213 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
23550340 |
agctgattctaatcattttgatgaaatgatgagaataatttctggtgtaatatgca---tcaccatgagaacattctttcatcggagttgataatgttct |
23550244 |
T |
|
| Q |
214 |
cttctat |
220 |
Q |
| |
|
||||||| |
|
|
| T |
23550243 |
cttctat |
23550237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 255
Target Start/End: Complemental strand, 14097674 - 14097432
Alignment:
| Q |
13 |
caagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttca |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
14097674 |
caagcatatgatcatgaattttcttctttgatatttctccaaccaatatcattaatgactgacttaataaataattcgttcatgaattggtttctcttca |
14097575 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttc |
212 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| | |||| ||| |||||||||||||||||||||||| |
|
|
| T |
14097574 |
aagttaattctaatcattttgatgaaatgatgagattgatttcgagtgtaatatgcatcctcattacgagaccattctttcatcggagttgataatgttc |
14097475 |
T |
|
| Q |
213 |
tcttctatgacaatatattcttggttaattaacattgaattat |
255 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
14097474 |
tcttctatgacaatatattctcggttaattaaccttgaattat |
14097432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 2850441 - 2850234
Alignment:
| Q |
13 |
caagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttca |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
2850441 |
caagcatatgatcatgaattttcttctttgatatttttccaatcaatatcattaatgagtgacttaataaataattcattcatgaattggtttctcttca |
2850342 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttc |
212 |
Q |
| |
|
||||||||||||||| |||| || ||||||||||| |||| |||||||||| | |||||||| | |||||||| | |||||||| |||||||| |||||| |
|
|
| T |
2850341 |
aagttgattctaatccttttaatcaaatgatgagaataatctcgagtgtaagaggcatcctctttatgagaacgttctttcatcagagttgatgatgttc |
2850242 |
T |
|
| Q |
213 |
tcttctat |
220 |
Q |
| |
|
|||||||| |
|
|
| T |
2850241 |
tcttctat |
2850234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 220
Target Start/End: Original strand, 17513874 - 17514021
Alignment:
| Q |
74 |
aattaataaataatttattcatgaattggtttctcttcaaagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcct |
173 |
Q |
| |
|
||||||| ||||||| |||||| |||||||||||||||||||||||| ||| |||| |||||| | |||||| |||||| |||||||||| |||| | |
|
|
| T |
17513874 |
aattaatgaataattcattcatcggttggtttctcttcaaagttgattcaaattatttcgatgaagtaatgagaataattttgagtgtaataatcatctt |
17513973 |
T |
|
| Q |
174 |
catcatgagaacatac-tttcatcggagttgataatgttctcttctat |
220 |
Q |
| |
|
||||||||||| | | ||||||| |||||||||||||||||||||| |
|
|
| T |
17513974 |
gatcatgagaaccttcttttcatcaaagttgataatgttctcttctat |
17514021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 177; Significance: 2e-95; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 13 - 255
Target Start/End: Original strand, 7786710 - 7786949
Alignment:
| Q |
13 |
caagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttca |
112 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
7786710 |
caagcatatgatcatgaattttct---ttgatatttcctcaaccaatatcattaatgaatgaattaataaataattcattcatgaattggtttctcttca |
7786806 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttc |
212 |
Q |
| |
|
||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
7786807 |
aagttgattctaatctttttaatgaaatgatgagacaaatttcgagtgtaatatgcatcttcatcacgagaacattctttcatcggagttgataatgttc |
7786906 |
T |
|
| Q |
213 |
tcttctatgacaatatattcttggttaattaacattgaattat |
255 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
7786907 |
tcttctatgacaatatattctcggttaattaaccttgaattat |
7786949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 9308434 - 9308228
Alignment:
| Q |
14 |
aagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaa |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| | ||||||||| ||||| ||| ||||||||||||| |||||||||||| |||||||| || |
|
|
| T |
9308434 |
aagcatatgatcatgaattttcttctttgatcattctccgatcaatatcataaatgaatgacttaataaataattcattcatgaattgatttctctttaa |
9308335 |
T |
|
| Q |
114 |
agttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttct |
213 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
9308334 |
agctgattctaatcattttgatgaaatgatgagaataatttcttgtgtaatatgcatcctcatcatgagaacattctttcatcggagttgataatgttct |
9308235 |
T |
|
| Q |
214 |
cttctat |
220 |
Q |
| |
|
||||||| |
|
|
| T |
9308234 |
cttctat |
9308228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 36434040 - 36434246
Alignment:
| Q |
14 |
aagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaa |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| | ||| ||||| ||||| ||| ||||||||||||| |||||||||||| ||||| || || |
|
|
| T |
36434040 |
aagcatatgatcatgaattttcttctttgatcattctccgatcaacatcataaatgaatgacttaataaataattcattcatgaattgatttctttttaa |
36434139 |
T |
|
| Q |
114 |
agttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttct |
213 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||| |
|
|
| T |
36434140 |
agctgattctaatcattttgatgaaatgatgagaataatttctagtgtaatatgcatcctcataatgagaacattctttcaccggagttgataatgttct |
36434239 |
T |
|
| Q |
214 |
cttctat |
220 |
Q |
| |
|
|||||| |
|
|
| T |
36434240 |
attctat |
36434246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 220
Target Start/End: Original strand, 13329735 - 13329882
Alignment:
| Q |
74 |
aattaataaataatttattcatgaattggtttctcttcaaagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcct |
173 |
Q |
| |
|
||||||| ||||||| |||||| |||||||||||||||||||||||| ||| |||| |||||| | |||||| ||||||||||||||||| |||| | |
|
|
| T |
13329735 |
aattaatgaataattcattcatcggttggtttctcttcaaagttgattcgaattatttcgatgaagtaatgagaataatttcgagtgtaataatcatctt |
13329834 |
T |
|
| Q |
174 |
catcatgagaacatac-tttcatcggagttgataatgttctcttctat |
220 |
Q |
| |
|
|| ||||||||||| | ||||||| |||||||||||||||||||||| |
|
|
| T |
13329835 |
caccatgagaacattcttttcatcaaagttgataatgttctcttctat |
13329882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 67 - 255
Target Start/End: Original strand, 13978313 - 13978509
Alignment:
| Q |
67 |
atgagtgaattaataaataatttattcatgaattggtttctcttcaaagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatat |
166 |
Q |
| |
|
|||| ||| ||||| |||| || ||||||| ||| |||| ||||||||||||||||||||||||| |||| | || ||| ||||||| ||||||||| |
|
|
| T |
13978313 |
atgaatgacttaatgaatagttcattcatggatttgtttatcttcaaagttgattctaatcatttccgtgaagtaataagaataatttcaagtgtaataa |
13978412 |
T |
|
| Q |
167 |
gcatcctcatcatgagaacatac-tttcatcggagttgataatgttctcttctat-------gacaatatattcttggttaattaacattgaattat |
255 |
Q |
| |
|
|||| |||||| |||| ||| | ||||||| ||||||||| |||||||| ||| |||||||| |||||||| ||||||| ||||||||| |
|
|
| T |
13978413 |
tcatcatcatcacgagaccattcttttcatcaaagttgataaggttctcttttatatgagaagacaatatcttcttggtcaattaaccttgaattat |
13978509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 131
Target Start/End: Complemental strand, 23484915 - 23484847
Alignment:
| Q |
63 |
attaatgagtgaattaataaataatttattcatgaattggtttctcttcaaagttgattctaatcattt |
131 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||| |
|
|
| T |
23484915 |
attaatgaatgacttaataaataatttattcatcggttggtttctcttcaaagttgattctaattattt |
23484847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 255
Target Start/End: Original strand, 9294424 - 9294520
Alignment:
| Q |
166 |
tgcatcctcatcatgagaacatactttcatcggagttgataatgttctcttct-------atgacaatatattcttggttaattaacattgaattat |
255 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||||||||||||||| || | ||||||||| ||||||||||||||||| || |||||| |
|
|
| T |
9294424 |
tgcatcatcatcatgagaacattttttcatcggagttgataatgttctattatatataggatgacaatacattcttggttaattaacttttaattat |
9294520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 253
Target Start/End: Complemental strand, 23484850 - 23484740
Alignment:
| Q |
151 |
atttcgagtgtaatatgcatcctcatcatgagaacatacttt-catcggagttgataatgttctcttctat-------gacaatatattcttggttaatt |
242 |
Q |
| |
|
||||||||||||||| |||| ||||||||||||| | |||| |||| |||||||||||||||||||||| |||||||| |||||||| |||| |
|
|
| T |
23484850 |
atttcgagtgtaataatcatcttcatcatgagaaccttcttttcatcaaagttgataatgttctcttctatataagaagacaatatcttcttggtcaatt |
23484751 |
T |
|
| Q |
243 |
aacattgaatt |
253 |
Q |
| |
|
||| ||||||| |
|
|
| T |
23484750 |
aaccttgaatt |
23484740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 13329698 - 13329736
Alignment:
| Q |
16 |
gcatatgatcatgaattttcttctttgatatttctccaa |
54 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
13329698 |
gcatatgatcatgaattttcttccttgataattctccaa |
13329736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 168; Significance: 4e-90; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 13 - 255
Target Start/End: Complemental strand, 9418207 - 9417958
Alignment:
| Q |
13 |
caagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttca |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
9418207 |
caagcatatgatcatgaattttcttctttgatatttctccaatcaatatcattaatgaacgacttaataaataattcatttatgaattggtttctcttca |
9418108 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttc |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||| |
|
|
| T |
9418107 |
aagttgattctaatcattttgatgaaatgattagaataatttcgagtgtaatatgcatcttcatcatgagaacattctttcatcggagttgataattttc |
9418008 |
T |
|
| Q |
213 |
tcttc-------tatgacaatatattcttggttaattaacattgaattat |
255 |
Q |
| |
|
||||| |||||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
9418007 |
tcttctatatgatatgacaatacattctcggttaattaaccttgaattat |
9417958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 31576666 - 31576871
Alignment:
| Q |
13 |
caagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttca |
112 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||| ||||||||||||| |||||||||||| |||||||||| |
|
|
| T |
31576666 |
caagcatgtgatcatgaattttcttctttgatatttttccaatcaatatcattaatgaatgacttaataaataattcattcatgaattgatttctcttca |
31576765 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttc |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||||| |
|
|
| T |
31576766 |
aagttgattctaatcattttgatgaaatgatgagaataatttcgagtgtaatatgcatactcattatgagatcattctttcatcggagttgataatgttc |
31576865 |
T |
|
| Q |
213 |
tcttct |
218 |
Q |
| |
|
||||| |
|
|
| T |
31576866 |
gcttct |
31576871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 13 - 255
Target Start/End: Complemental strand, 24268660 - 24268411
Alignment:
| Q |
13 |
caagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttca |
112 |
Q |
| |
|
||||||| ||||||||||||||||||||| |||||| | ||| ||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
24268660 |
caagcatgtgatcatgaattttcttcttttatattttttcaatcaatatcattaatgaatgacttaataaataattcattcatgaattggtttctcttca |
24268561 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttc |
212 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||| ||| |||||||||||||||||||||||| |
|
|
| T |
24268560 |
aagttgattataatcattttgatgaaatgatgagaataatttcgagtgtaatatgcatcttcattatgagatcattctttcatcggagttgataatgttc |
24268461 |
T |
|
| Q |
213 |
tcttct-------atgacaatatattcttggttaattaacattgaattat |
255 |
Q |
| |
|
||||| ||||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
24268460 |
gcttctatatgagatgacaataaattctcggttaattaaccttgaattat |
24268411 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 14 - 255
Target Start/End: Complemental strand, 7836743 - 7836495
Alignment:
| Q |
14 |
aagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaa |
113 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| |||||| | ||||||||| ||||| ||| ||||||||||||| |||||||||||| |||||||| || |
|
|
| T |
7836743 |
aagcatatgatcatgattttttttctttgatcattctccgatcaatatcataaatgaatgacttaataaataattcattcatgaattgatttctctttaa |
7836644 |
T |
|
| Q |
114 |
agttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttct |
213 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||| | ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
7836643 |
agctgattctaatcattttgatgaaacgatgataataatttccagtgtaatatgcatcctcatcatgagaacattctttcatcggagttgataatgttct |
7836544 |
T |
|
| Q |
214 |
cttct-------atgacaatatattcttggttaattaacattgaattat |
255 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||| || |||||| |
|
|
| T |
7836543 |
cttctatatgggatgacaatatattctcggttaattaacctttaattat |
7836495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 31 - 220
Target Start/End: Complemental strand, 997374 - 997185
Alignment:
| Q |
31 |
ttttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaaagttgattctaatcatt |
130 |
Q |
| |
|
|||||||||||||| |||||| | ||||||||| ||||| ||| ||||||||||||| |||||||||||| |||||||| |||| |||||||||||||| |
|
|
| T |
997374 |
ttttcttctttgatcattctccgatcaatatcataaatgaatgacttaataaataattcattcatgaattgatttctctttaaagctgattctaatcatt |
997275 |
T |
|
| Q |
131 |
ttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttctcttctat |
220 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
997274 |
ttgatgaaatgatgagaataatttctagtgtaatatgcatcctcatcatgagaacattctttcatcggagttgataatgttctcttctat |
997185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 16 - 220
Target Start/End: Original strand, 24097472 - 24097676
Alignment:
| Q |
16 |
gcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaaag |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| ||| ||||| ||||| ||| ||||| ||||||| ||| ||| |||||||||||||||||| |
|
|
| T |
24097472 |
gcatatgatcatgaattttcttctttgataattctccaatcaacatcatgaatgaatgacttaatgaataattcatttatggattggtttctcttcaaag |
24097571 |
T |
|
| Q |
116 |
ttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttctct |
215 |
Q |
| |
|
||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||||| |||||||||| || |||||||| |||||||||||||||||| |
|
|
| T |
24097572 |
ttgattctaattattttgatgaaatgatgagaataatttcaagtgtaatagccatccttatcatgagaaaattctttcatcagagttgataatgttctct |
24097671 |
T |
|
| Q |
216 |
tctat |
220 |
Q |
| |
|
||||| |
|
|
| T |
24097672 |
tctat |
24097676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 14 - 255
Target Start/End: Complemental strand, 7807320 - 7807070
Alignment:
| Q |
14 |
aagcatatgatcatgaattttctt--ctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttc |
111 |
Q |
| |
|
|||||||||||||||| |||| || ||||||| |||||| | ||||||||| ||||| ||| ||||||||||||| |||||||||||| |||||||| |
|
|
| T |
7807320 |
aagcatatgatcatgattttttttttctttgatcattctccgatcaatatcataaatgaatgacttaataaataattcattcatgaattgatttctcttt |
7807221 |
T |
|
| Q |
112 |
aaagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgtt |
211 |
Q |
| |
|
|||| ||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| |||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
7807220 |
aaagctgattctaatcattttgatgaaacgatgagaataatttctagtgtaatatgcattctcatcgtgagaacattctttcatcggagttgataatgtt |
7807121 |
T |
|
| Q |
212 |
ctcttct-------atgacaatatattcttggttaattaacattgaattat |
255 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||| || |||||| |
|
|
| T |
7807120 |
ctcttctatataggatgacaatatattctcggttaattaacctttaattat |
7807070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 220
Target Start/End: Complemental strand, 20028706 - 20028559
Alignment:
| Q |
74 |
aattaataaataatttattcatgaattggtttctcttcaaagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcct |
173 |
Q |
| |
|
||||||| ||||||| |||||| |||||||||||||||||||||||||||| |||| ||||| | |||||| ||||||||||||||||| |||| | |
|
|
| T |
20028706 |
aattaatgaataattcattcatcggttggtttctcttcaaagttgattctaattatttcgatgaggtaatgagaataatttcgagtgtaataatcatctt |
20028607 |
T |
|
| Q |
174 |
catcatgagaacatac-tttcatcggagttgataatgttctcttctat |
220 |
Q |
| |
|
|||||||||||| | | ||||||| |||||||||||||||||||||| |
|
|
| T |
20028606 |
catcatgagaaccttcttttcatcaaagttgataatgttctcttctat |
20028559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 220
Target Start/End: Complemental strand, 20036467 - 20036320
Alignment:
| Q |
74 |
aattaataaataatttattcatgaattggtttctcttcaaagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcct |
173 |
Q |
| |
|
||||||| ||||||| |||||| ||| |||||||||||||||||||||||| |||| |||||| | |||||| ||||||||||||||||| |||| | |
|
|
| T |
20036467 |
aattaatgaataattcattcatcggttgatttctcttcaaagttgattctaattatttcgatgaagtaatgagaataatttcgagtgtaataatcatctt |
20036368 |
T |
|
| Q |
174 |
catcatgagaacatac-tttcatcggagttgataatgttctcttctat |
220 |
Q |
| |
|
|||||||||||| | | ||||||| |||||||||||||||||||||| |
|
|
| T |
20036367 |
catcatgagaaccttcttttcatcaaagttgataatgttctcttctat |
20036320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 220
Target Start/End: Original strand, 42714000 - 42714147
Alignment:
| Q |
74 |
aattaataaataatttattcatgaattggtttctcttcaaagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcct |
173 |
Q |
| |
|
||||||| ||||||| |||||| |||||||||| ||||||||||||||||| |||| |||||| | |||||| ||||||||||||||||| |||| | |
|
|
| T |
42714000 |
aattaatgaataattcattcatcggttggtttctcctcaaagttgattctaattatttcgatgaagtaatgagaataatttcgagtgtaataatcatctt |
42714099 |
T |
|
| Q |
174 |
catcatgagaacatac-tttcatcggagttgataatgttctcttctat |
220 |
Q |
| |
|
|||||||||||| | | ||||||| |||||||||||||||||||||| |
|
|
| T |
42714100 |
catcatgagaaccttcttttcatcaaagttgataatgttctcttctat |
42714147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 63 - 253
Target Start/End: Complemental strand, 12766190 - 12766000
Alignment:
| Q |
63 |
attaatgagtgaattaataaataatttattcatgaattggtttctcttcaaagttgattctaatcattttgatgaaatgatgagactaatttcgagtgta |
162 |
Q |
| |
|
|||||||| ||| ||||| |||||||||||||| |||||||||||||||||||||||||||| |||| ||||||| |||||||||||||| |
|
|
| T |
12766190 |
attaatgaatgacttaatgaataatttattcatcggttggtttctcttcaaagttgattctaattattt--------cgatgagaataatttcgagtgta |
12766099 |
T |
|
| Q |
163 |
atatgcatcctcatcatgagaacatac-tttcatcggagttgataatgttctcttctat-------gacaatatattcttggttaattaacattgaatt |
253 |
Q |
| |
|
||| |||| ||||||||||||| | | ||||||| |||||||||||||||||||||| |||||||| |||||||||||||||| ||||||| |
|
|
| T |
12766098 |
ataatcatcttcatcatgagaaccttcttttcatcaaagttgataatgttctcttctatataagaagacaatatcttcttggttaattaaccttgaatt |
12766000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 20028743 - 20028705
Alignment:
| Q |
16 |
gcatatgatcatgaattttcttctttgatatttctccaa |
54 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
20028743 |
gcatatgatcatgaattttcttccttgataattctccaa |
20028705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 20036504 - 20036466
Alignment:
| Q |
16 |
gcatatgatcatgaattttcttctttgatatttctccaa |
54 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
20036504 |
gcatatgatcatgaattttcttccttgataattctccaa |
20036466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 42713963 - 42714001
Alignment:
| Q |
16 |
gcatatgatcatgaattttcttctttgatatttctccaa |
54 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
42713963 |
gcatatgatcatgaattttcttccttgataattctccaa |
42714001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 168; Significance: 4e-90; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 14272054 - 14271847
Alignment:
| Q |
13 |
caagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttca |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
14272054 |
caagcatatgatcatgaattttcttctttgatatttctccaatcaatatcattaatgaatgacttaataaataatttattcatgaatttgtttctcttca |
14271955 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttc |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||| |||||||| |||||||| |||||| |
|
|
| T |
14271954 |
aagttgattctaatcattttgatgaaatgatgagaataatttagagtgtaatatgcatcctcatcttgagaacattctttcatcagagttgatgatgttc |
14271855 |
T |
|
| Q |
213 |
tcttctat |
220 |
Q |
| |
|
|||||||| |
|
|
| T |
14271854 |
tcttctat |
14271847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 13 - 255
Target Start/End: Complemental strand, 29910422 - 29910173
Alignment:
| Q |
13 |
caagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttca |
112 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
29910422 |
caagtatatgatcatgaattttcttctttgatatttcttcaatcaatatcattaatgaatgacttaataaataattcattcatgaattggtttctcttca |
29910323 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttc |
212 |
Q |
| |
|
|| |||||| | ||||||||||||||||||||| | |||||| |||||||| | |||||||||| | || ||||| ||||||| ||||||||||||||| |
|
|
| T |
29910322 |
aaattgatttttatcattttgatgaaatgatgaaaataattttgagtgtaagaggcatcctcataaagaaaacattctttcattagagttgataatgttc |
29910223 |
T |
|
| Q |
213 |
tcttct-------atgacaatatattcttggttaattaacattgaattat |
255 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
29910222 |
tcttctatatgtgatgacaatacattcttggttaattaaccttgaattat |
29910173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 18577741 - 18577607
Alignment:
| Q |
20 |
atgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaaagttga |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| |||||||| | | ||||||||||||| ||||||||||||||||||||| ||| |||| |
|
|
| T |
18577741 |
atgatcatgaattttcttctttgatatttctccaatcaatattattaatgaattacttaataaataattcattcatgaattggtttctcttgaaaattga |
18577642 |
T |
|
| Q |
120 |
ttctaatcattttgatgaaatgatgagactaattt |
154 |
Q |
| |
|
||||||||||||||||||||||||| || |||||| |
|
|
| T |
18577641 |
ttctaatcattttgatgaaatgatgggaataattt |
18577607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 74 - 220
Target Start/End: Complemental strand, 35875999 - 35875852
Alignment:
| Q |
74 |
aattaataaataatttattcatgaattggtttctcttcaaagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcct |
173 |
Q |
| |
|
||||||| ||||||| |||||| |||||||||||||||||||||||||||| |||| |||||| | |||||| ||||||||||||||||| |||| | |
|
|
| T |
35875999 |
aattaatgaataattcattcatcggttggtttctcttcaaagttgattctaattatttcgatgaagtaatgagaataatttcgagtgtaataatcatctt |
35875900 |
T |
|
| Q |
174 |
catcatgagaacatac-tttcatcggagttgataatgttctcttctat |
220 |
Q |
| |
|
|||||||||||| | | ||||||| |||||||||||||||||||||| |
|
|
| T |
35875899 |
catcatgagaaccttcttttcatcaaagttgataatgttctcttctat |
35875852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 74 - 220
Target Start/End: Complemental strand, 35883488 - 35883341
Alignment:
| Q |
74 |
aattaataaataatttattcatgaattggtttctcttcaaagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcct |
173 |
Q |
| |
|
||||||| ||||||| |||||| |||||||||||||||||||||||||||| |||| |||||| | |||||| ||||||||||||||||| |||| | |
|
|
| T |
35883488 |
aattaatgaataattcattcatcggttggtttctcttcaaagttgattctaattatttcgatgaagtaatgagaataatttcgagtgtaataatcatctt |
35883389 |
T |
|
| Q |
174 |
catcatgagaacatac-tttcatcggagttgataatgttctcttctat |
220 |
Q |
| |
|
|||||||||||| | | ||||||| |||||||||||||||||||||| |
|
|
| T |
35883388 |
catcatgagaaccttcttttcatcaaagttgataatgttctcttctat |
35883341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 74 - 220
Target Start/End: Complemental strand, 36723201 - 36723054
Alignment:
| Q |
74 |
aattaataaataatttattcatgaattggtttctcttcaaagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcct |
173 |
Q |
| |
|
||||||| ||||||| |||||| |||||||||||||||||||||||||||| |||| |||||| | |||||| ||||||||||||||||| |||| | |
|
|
| T |
36723201 |
aattaatgaataattcattcatcggttggtttctcttcaaagttgattctaattatttcgatgaagtaatgagaataatttcgagtgtaataatcatctt |
36723102 |
T |
|
| Q |
174 |
catcatgagaacatac-tttcatcggagttgataatgttctcttctat |
220 |
Q |
| |
|
|||||||||||| | | ||||||| |||||||||||||||||||||| |
|
|
| T |
36723101 |
catcatgagaaccttcttttcatcaaagttgataatgttctcttctat |
36723054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 33403072 - 33403008
Alignment:
| Q |
156 |
gagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttctcttctat |
220 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||| ||||||| ||||||||| ||||| |||||||| |
|
|
| T |
33403072 |
gagtgtaacatgcatcctcatcttgagaacattctttcattggagttgatgatgttttcttctat |
33403008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 18577600 - 18577556
Alignment:
| Q |
176 |
tcatgagaacatactttcatcggagttgataatgttctcttctat |
220 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
18577600 |
tcatgagaacattatttcatcggagttgataatgttcttttctat |
18577556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 35876036 - 35875998
Alignment:
| Q |
16 |
gcatatgatcatgaattttcttctttgatatttctccaa |
54 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
35876036 |
gcatatgatcatgaattttcttccttgataattctccaa |
35875998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 35883525 - 35883487
Alignment:
| Q |
16 |
gcatatgatcatgaattttcttctttgatatttctccaa |
54 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
35883525 |
gcatatgatcatgaattttcttccttgataattctccaa |
35883487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 36723238 - 36723200
Alignment:
| Q |
16 |
gcatatgatcatgaattttcttctttgatatttctccaa |
54 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
36723238 |
gcatatgatcatgaattttcttccttgataattctccaa |
36723200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 164; Significance: 1e-87; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 17 - 255
Target Start/End: Complemental strand, 11481164 - 11480919
Alignment:
| Q |
17 |
catatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaaagt |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||||| ||||||||| | |||| |||||||||| |
|
|
| T |
11481164 |
catatgatcatgaattttcttctttgatatttttccaatcaatatcattaatgaatggcttaataaataattcattcatgaactagtttatcttcaaagt |
11481065 |
T |
|
| Q |
117 |
tgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttctctt |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
11481064 |
tgattctaatcattttgatgaaatgatgagaataatttcgagtgtaatatgcatcctcatcatgagaacattatttcatcggagttgataatgttctctt |
11480965 |
T |
|
| Q |
217 |
ct-------atgacaatatattcttggttaattaacattgaattat |
255 |
Q |
| |
|
|| ||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
11480964 |
ctatatgagatgacaatatattctcggttaattaaccttgaattat |
11480919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 14 - 255
Target Start/End: Complemental strand, 25514975 - 25514728
Alignment:
| Q |
14 |
aagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaa |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| | ||||||||| ||||| ||| ||||||||||||| ||| |||||||| |||||||| || |
|
|
| T |
25514975 |
aagcatatgatcatgaattttcttctttgatcattctccgatcaatatcataaatgaatgacttaataaataattcattaatgaattgatttctctttaa |
25514876 |
T |
|
| Q |
114 |
agttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttct |
213 |
Q |
| |
|
|||||||||||||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
25514875 |
agttgattctaatcattttgataaaataatgagaataatttcaggtgtaatatgcatcctcatcatgagaacattctttcatcggagttgataatgttct |
25514776 |
T |
|
| Q |
214 |
cttct------atgacaatatattcttggttaattaacattgaattat |
255 |
Q |
| |
|
||||| ||||||||| ||||| ||||||||||| || |||||| |
|
|
| T |
25514775 |
cttctatatggatgacaatacattctcggttaattaacctttaattat |
25514728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 14 - 220
Target Start/End: Original strand, 50066080 - 50066286
Alignment:
| Q |
14 |
aagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaa |
113 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |||||| | ||||||||| ||||| ||| ||||||||||||| |||||||||||| |||||||| || |
|
|
| T |
50066080 |
aagcatataatcatgaattttcttctttgatcattctccgatcaatatcataaatgaatgacttaataaataattcattcatgaattgatttctctttaa |
50066179 |
T |
|
| Q |
114 |
agttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttct |
213 |
Q |
| |
|
|| |||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
50066180 |
agctgattctaataattttgatgaaatgatgagaataatttctggtgtaatatgcatcctcatcatgagaacattctttcatcatagttgataatgttct |
50066279 |
T |
|
| Q |
214 |
cttctat |
220 |
Q |
| |
|
||||||| |
|
|
| T |
50066280 |
cttctat |
50066286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 28069716 - 28069512
Alignment:
| Q |
14 |
aagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaa |
113 |
Q |
| |
|
||||||||| |||||| |||||||||||||| |||||| | ||||||||| ||||| ||| ||||||||||||| ||| |||||||| |||||||| || |
|
|
| T |
28069716 |
aagcatatgttcatgagttttcttctttgatcattctccgatcaatatcataaatgaatgacttaataaataattcatttatgaattgatttctctttaa |
28069617 |
T |
|
| Q |
114 |
agttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttct |
213 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
28069616 |
agctgattctaatcattttgatgaaatgatgagaataatttctagtgtaatatgcatc--catcatgagaacattctttcattggagttgataatgttct |
28069519 |
T |
|
| Q |
214 |
cttctat |
220 |
Q |
| |
|
||||||| |
|
|
| T |
28069518 |
cttctat |
28069512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 13 - 213
Target Start/End: Original strand, 50518433 - 50518633
Alignment:
| Q |
13 |
caagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttca |
112 |
Q |
| |
|
||||||||||||| ||||||||| |||||||||| | | | ||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
50518433 |
caagcatatgatcccaaattttcttttttgatattttttccatcaatatcattaatgaatgacttaataaataattcattcatgaattggtttctcttca |
50518532 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttc |
212 |
Q |
| |
|
|| ||||||||||||||||| || ||||||||||| |||| | |||||||| | |||||||| ||||||||| | |||||||||||||||||||||||| |
|
|
| T |
50518533 |
aaattgattctaatcattttaatcaaatgatgagaataatcttgagtgtaagaagcatcctcttcatgagaatgttctttcatcggagttgataatgttc |
50518632 |
T |
|
| Q |
213 |
t |
213 |
Q |
| |
|
| |
|
|
| T |
50518633 |
t |
50518633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 36 - 220
Target Start/End: Original strand, 34495225 - 34495409
Alignment:
| Q |
36 |
ttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaaagttgattctaatcattttgat |
135 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||| ||| ||||| |||||||||||| || |||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
34495225 |
ttctttgataattctccaatcaatatcattaatgaatgacttaatgaataatttattcctggattggtatctcttcaaagttgattcttatcattttgat |
34495324 |
T |
|
| Q |
136 |
gaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttctcttctat |
220 |
Q |
| |
|
||| | |||||| ||||||| ||||||||| |||| |||||||||||| || |||||||| |||||||||||||||| ||||| |
|
|
| T |
34495325 |
gaagtaatgagaataatttcaagtgtaataatcatcttcatcatgagaatattctttcatcaaagttgataatgttctcatctat |
34495409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 220
Target Start/End: Complemental strand, 9244015 - 9243808
Alignment:
| Q |
16 |
gcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatt---tattcatgaattggtttctcttca |
112 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||| ||| ||||||||||||||| | | | ||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
9244015 |
gcatatgatcatgaattttcatctttgataattcttcaatcaatatcattaatgaataactcaatgaataattcaatattcatgaattggtttctcttca |
9243916 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttc |
212 |
Q |
| |
|
|| || || |||||||||||| |||||| | |||| |||||||||||| |||| |||| |||| |||||||||| ||||| | |||||||||||||| |
|
|
| T |
9243915 |
aaattaatcctaatcattttgttgaaataacgagaataatttcgagtgaaataaacatcttcataatgagaacattatttcaccagagttgataatgtta |
9243816 |
T |
|
| Q |
213 |
tcttctat |
220 |
Q |
| |
|
|||||||| |
|
|
| T |
9243815 |
tcttctat |
9243808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 21 - 220
Target Start/End: Original strand, 28257548 - 28257737
Alignment:
| Q |
21 |
tgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaaagttgat |
120 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||| ||||||| || ||||| ||||| | ||||||||||| ||||||||||||||||||| |
|
|
| T |
28257548 |
tgatcataaattttcttctttgataattctccaa---------ttaatgaacgacttaatgaataactcattcatgaattagtttctcttcaaagttgat |
28257638 |
T |
|
| Q |
121 |
tctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttctcttctat |
220 |
Q |
| |
|
||||||||| |||||| | |||||| || |||||||||||||| |||| ||||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
28257639 |
a-taatcatttcgatgaagtaatgagaatattttcgagtgtaatagtcatcttcatcatgagaacattctttcattaaagttgataatgttctcttctat |
28257737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 196
Target Start/End: Complemental strand, 9204176 - 9204004
Alignment:
| Q |
27 |
tgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatt---tattcatgaattggtttctcttcaaagttgattct |
123 |
Q |
| |
|
|||| |||| ||||||||| |||||||| ||||||||||||||| | | || || ||||||| |||||||||||||||||| ||||||| ||||| || |
|
|
| T |
9204176 |
tgaagtttcatctttgataattctccaatcaatatcattaatgaataactttatgaataattcaatattcatgaattggtttcacttcaaaattgatcct |
9204077 |
T |
|
| Q |
124 |
aatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatc |
196 |
Q |
| |
|
||||| ||||||||||| | ||| ||||||||||||||||| |||| ||||||||||||||| ||| |||| |
|
|
| T |
9204076 |
aatcaatttgatgaaataacaagaataatttcgagtgtaataaacatcttcatcatgagaacattcttccatc |
9204004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 196
Target Start/End: Complemental strand, 9208395 - 9208223
Alignment:
| Q |
27 |
tgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatt---tattcatgaattggtttctcttcaaagttgattct |
123 |
Q |
| |
|
|||| |||| ||||||||| |||||||| ||||||||||||||| | | || || ||||||| |||||||||||||||||| ||||||| ||||| || |
|
|
| T |
9208395 |
tgaagtttcatctttgataattctccaatcaatatcattaatgaataactttatgaataattcaatattcatgaattggtttcacttcaaaattgatgct |
9208296 |
T |
|
| Q |
124 |
aatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatc |
196 |
Q |
| |
|
||||| ||||||||||| | ||| ||||||||||||||||| |||| ||||||||||||||| ||| |||| |
|
|
| T |
9208295 |
aatcaatttgatgaaataacaagaataatttcgagtgtaataaacatcttcatcatgagaacattcttccatc |
9208223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 220
Target Start/End: Complemental strand, 7580690 - 7580487
Alignment:
| Q |
16 |
gcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaaag |
115 |
Q |
| |
|
||||||||||||||||||| || ||||||| |||| | |||||||| |||||| ||| | ||| ||||||||||||| |||| |||||| ||||||| |
|
|
| T |
7580690 |
gcatatgatcatgaatttt-ttatttgataattcttggatcaatatcaataatgaatgactcaatgaataatttattcacaaattagtttcttttcaaag |
7580592 |
T |
|
| Q |
116 |
ttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttctct |
215 |
Q |
| |
|
||||||| || |||||| ||||||| |||||| ||| ||| |||||||| |||| ||||| | |||| || ||||||| ||||| |||||||||||| |
|
|
| T |
7580591 |
ttgattccaaccatttttatgaaataatgagaataaattcaggtgtaataaacatcttcatcttcagaatattctttcataagagttaataatgttctct |
7580492 |
T |
|
| Q |
216 |
tctat |
220 |
Q |
| |
|
||||| |
|
|
| T |
7580491 |
tctat |
7580487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 9245729 - 9245659
Alignment:
| Q |
150 |
aatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttctcttctat |
220 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||| || ||| ||| ||||||||||| ||||||||||| |
|
|
| T |
9245729 |
aatttcgagtgtaataaacatattcatcatgagaatattcttcaatcagagttgataattttctcttctat |
9245659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0091 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: scaffold0091
Description:
Target: scaffold0091; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 13 - 220
Target Start/End: Original strand, 15905 - 16112
Alignment:
| Q |
13 |
caagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttca |
112 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
15905 |
caagcatatgatcatgtattttcttctttgatatttctccaatcaatatcattaatgaatgacataataaataattcattcatgaattggtttctcttca |
16004 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttc |
212 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||| |||||||||||||||| |||||| |
|
|
| T |
16005 |
aagttaattctaatcattttgatgaaatgatgagaataatttagagtgtaatatgcatcctcatcttgagaacattgtttcatcggagttgatgatgttc |
16104 |
T |
|
| Q |
213 |
tcttctat |
220 |
Q |
| |
|
| |||||| |
|
|
| T |
16105 |
ttttctat |
16112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 148; Significance: 4e-78; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 13 - 255
Target Start/End: Original strand, 42733817 - 42734057
Alignment:
| Q |
13 |
caagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttca |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||| ||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
42733817 |
caagcatatgatcatgaattttcttctttgatat---------caatatcattaatgaatgacttgataaataatttattcatgaattggtttctcttca |
42733907 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttc |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
42733908 |
aagttgattctaatcattttgatgaaatgatgataataatttcgagtgtaatatgcatcctcatcatgagaccattctttcatcggagttgataatgttt |
42734007 |
T |
|
| Q |
213 |
tcttct-------atgacaatatattcttggttaattaacattgaattat |
255 |
Q |
| |
|
|||||| ||||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
42734008 |
tcttctatatgagatgacaatacattctcggttaattaaccttgaattat |
42734057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 14 - 220
Target Start/End: Complemental strand, 2641287 - 2641081
Alignment:
| Q |
14 |
aagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaa |
113 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |||||| | ||||||||| ||||| ||| ||||||||||||| |||||||||||| |||||||| || |
|
|
| T |
2641287 |
aagcatatgatcgtgaattttcttctttgatcattctccgatcaatatcataaatgaatgatttaataaataattcattcatgaattgatttctctttaa |
2641188 |
T |
|
| Q |
114 |
agttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttct |
213 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
2641187 |
agctgattctaatcattttgatgaaatgatgagaataatttctggtgtaatatgcatccccatcatgagaacattctttcatcggagttaataatgttct |
2641088 |
T |
|
| Q |
214 |
cttctat |
220 |
Q |
| |
|
||||||| |
|
|
| T |
2641087 |
cttctat |
2641081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 11222245 - 11222047
Alignment:
| Q |
13 |
caagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttca |
112 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||| ||||||||||||||| ||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
11222245 |
caagtatatgatcatgaattttcttttttgatat---------caatatcattaatgaatgacttgataaataatttattcatgaattggtttctcttca |
11222155 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttc |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||||||||||||| |
|
|
| T |
11222154 |
aagttgattctaatcattttgatgaaatgatgagaataatttcgagtgtaatatgcatccttatcatgagaccattctttcgtcggagttgataatgttt |
11222055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 17 - 220
Target Start/End: Complemental strand, 26649404 - 26649206
Alignment:
| Q |
17 |
catatgatcatgaattttcttctttgatattt-ctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaaag |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| ||||||| ||||| |||||||||||| ||| |||| |
|
|
| T |
26649404 |
catatgatcatgaattttcttctttgatattttctccaatcaatatcattaatgaatgacttaataagtaattcattcatgaattgattt------aaag |
26649311 |
T |
|
| Q |
116 |
ttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttctct |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||| |||||||||||| |
|
|
| T |
26649310 |
ttgattctaatcattttgatgaaatgatgagactaatttcaagtgtaatatgcatcttcatcatgagaacattctttcaccggagttaataatgttctct |
26649211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 17 - 220
Target Start/End: Complemental strand, 26920989 - 26920791
Alignment:
| Q |
17 |
catatgatcatgaattttcttctttgatattt-ctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaaag |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| ||||||| ||||| |||||||||||| ||| |||| |
|
|
| T |
26920989 |
catatgatcatgaattttcttctttgatattttctccaatcaatatcattaatgaatgacttaataagtaattcattcatgaattgattt------aaag |
26920896 |
T |
|
| Q |
116 |
ttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttctct |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||| ||||||| |||||||||||| |
|
|
| T |
26920895 |
ttgattctaatcattttgatgaaatgatgagactaatttcaagtgtaatatgcatcttcatcatgagaacattctttcaccggagttaataatgttctct |
26920796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 9735817 - 9735619
Alignment:
| Q |
13 |
caagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttca |
112 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| ||||||||||||||| ||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
9735817 |
caagcatatgatcataaattttcttctttgatat---------caatatcattaatgaatgacttgataaataatttattcatgaattggtttctcttca |
9735727 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttc |
212 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
9735726 |
aagttgattctaaccgttttgatgaaatgatgagaatagtttcgagtgtaatatgcatcctcatcatgagaccattctttcatcggagttgataatgttt |
9735627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 13 - 187
Target Start/End: Original strand, 4314413 - 4314587
Alignment:
| Q |
13 |
caagcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttca |
112 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| || ||| || |||||||||| ||||||||||||||||||||||| |
|
|
| T |
4314413 |
caagcatatgatcatcaattttcttctttgataattctccaatcaatatcattaaagaatgacttgataaataattcattcatgaattggtttctcttca |
4314512 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacat |
187 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
4314513 |
aagttgattctaatcattttgatgaaattatgataataatttcgagtgtaatatgcatcctcatcaagagaacat |
4314587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 255
Target Start/End: Original strand, 8980712 - 8980956
Alignment:
| Q |
16 |
gcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaaag |
115 |
Q |
| |
|
||||||||||| ||||||| || ||||||| |||||| | ||||||||||||||| ||| | ||| ||||||||||||| |||| |||||| ||||||| |
|
|
| T |
8980712 |
gcatatgatcaagaatttt-ttatttgataattctccgatcaatatcattaatgaatgactgaatgaataatttattcacaaattagtttcttttcaaag |
8980810 |
T |
|
| Q |
116 |
ttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttctct |
215 |
Q |
| |
|
|||||| || |||||| ||||||| |||||| ||| ||| |||||||| |||| ||||| | |||| || ||||||| ||| | || ||||||||| |
|
|
| T |
8980811 |
ttgatttcaaccatttttatgaaataatgagaataaattcaggtgtaataaacatcttcatcttcagaatattctttcataagag-taattatgttctct |
8980909 |
T |
|
| Q |
216 |
tct-------atgacaatatattcttggttaattaacattgaattat |
255 |
Q |
| |
|
||| |||||||||| |||||||| ||||||| ||||||||| |
|
|
| T |
8980910 |
tctatatgagatgacaatattttcttggtcaattaactttgaattat |
8980956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 48712868 - 48713008
Alignment:
| Q |
16 |
gcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaaag |
115 |
Q |
| |
|
||||||||| ||||||||||||| |||||| |||||||| ||||||| ||| ||||| ||||||| |||||| ||||||||||||||||| |
|
|
| T |
48712868 |
gcatatgattatgaattttcttccttgataattctccaa---------ttaatgaatgacttaatgaataattcattcatcggttggtttctcttcaaag |
48712958 |
T |
|
| Q |
116 |
ttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaata |
165 |
Q |
| |
|
||||||||||| |||| |||||| | |||||| ||||||||||||||||| |
|
|
| T |
48712959 |
ttgattctaattatttcgatgaagtaatgagaataatttcgagtgtaata |
48713008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 161
Target Start/End: Complemental strand, 32816871 - 32816773
Alignment:
| Q |
63 |
attaatgagtgaattaataaataatttattcatgaattggtttctcttcaaagttgattctaatcattttgatgaaatgatgagactaatttcgagtgt |
161 |
Q |
| |
|
|||||||| ||| ||||| |||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||| | |||||| ||||||||||||| |
|
|
| T |
32816871 |
attaatgaatgacttaattcataattcattcatggattggtttttcttcagagttgattctaattattttgatgaagtaatgagaataatttcgagtgt |
32816773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 2890606 - 2890506
Alignment:
| Q |
63 |
attaatgagtgaattaataaataatttattcatgaattggtttctcttcaaagttgattctaatcattttgatgaaatgatgagactaatttcgagtgta |
162 |
Q |
| |
|
|||||| | ||| ||||| ||||||| ||||||| |||| ||| |||||| ||||||||||||| ||||||||||| | |||||| |||||||||||||| |
|
|
| T |
2890606 |
attaattaatgacttaatgaataattcattcatggattgatttttcttcagagttgattctaattattttgatgaagtaatgagaataatttcgagtgta |
2890507 |
T |
|
| Q |
163 |
a |
163 |
Q |
| |
|
| |
|
|
| T |
2890506 |
a |
2890506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0482 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0482
Description:
Target: scaffold0482; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 56 - 255
Target Start/End: Original strand, 11412 - 11617
Alignment:
| Q |
56 |
caatatcattaatgagtgaattaataaataatttattcatgaattggtttctcttcaaagttgattctaatcattttgatgaaatgatgagactaatttc |
155 |
Q |
| |
|
||||||||| ||||| ||| ||||||||||||| |||||||||| |||||||| |||| ||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
11412 |
caatatcataaatga-tgacttaataaataattcattcatgaatgattttctctttaaagctgattctaatcattttgatgaaacgatgagaataatttc |
11510 |
T |
|
| Q |
156 |
gagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttctcttct-------atgacaatatattcttggttaattaacatt |
248 |
Q |
| |
|
|||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| || |
|
|
| T |
11511 |
tagtgtaatatgcattctcatcgtgagaacattctttcatcggagttgataatgttctcttctatataggatgacaatatattctcggttaattaacctt |
11610 |
T |
|
| Q |
249 |
gaattat |
255 |
Q |
| |
|
|||||| |
|
|
| T |
11611 |
taattat |
11617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0753 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0753
Description:
Target: scaffold0753; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 220
Target Start/End: Original strand, 3008 - 3215
Alignment:
| Q |
16 |
gcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatt---tattcatgaattggtttctcttca |
112 |
Q |
| |
|
|||||||||||||||||||| ||||||||| || | ||| ||||||||||||||| | | | ||| ||||||| |||||||||||||||||| ||||| |
|
|
| T |
3008 |
gcatatgatcatgaattttcatctttgataattattcaatcaatatcattaatgaataactcaatgaataattcaatattcatgaattggtttcacttca |
3107 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttc |
212 |
Q |
| |
|
|| ||||| ||||||| ||||||||||| | ||| ||||||||||||||||| |||| ||||||||||| ||| ||| |||| |||||||||||||| |
|
|
| T |
3108 |
aaattgatcctaatcaatttgatgaaataacaagaataatttcgagtgtaataaacatcttcatcatgagagcattcttacatcagagttgataatgtta |
3207 |
T |
|
| Q |
213 |
tcttctat |
220 |
Q |
| |
|
|||||||| |
|
|
| T |
3208 |
tcttctat |
3215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0753; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 16 - 220
Target Start/End: Original strand, 926 - 1133
Alignment:
| Q |
16 |
gcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataattta---ttcatgaattggtttctcttca |
112 |
Q |
| |
|
||||||||| ||||| |||| ||||||||| |||||||| ||||| |||||||| | | || || ||||||||| || ||||||||||||||||| | |
|
|
| T |
926 |
gcatatgataatgaagtttcatctttgataattctccaattaatattattaatgaataactttatgaataatttaatatttatgaattggtttctcttaa |
1025 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttc |
212 |
Q |
| |
|
|| |||| |||||||| | |||||||| |||||| ||||||||||||||||| |||| ||||||||||||||| ||| |||| ||||||||||| ||| |
|
|
| T |
1026 |
aaattgaacctaatcatatagatgaaataatgagaataatttcgagtgtaataaccatcttcatcatgagaacattcttccatcagagttgataattttc |
1125 |
T |
|
| Q |
213 |
tcttctat |
220 |
Q |
| |
|
|||||||| |
|
|
| T |
1126 |
tcttctat |
1133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135 (Bit Score: 71; Significance: 3e-32; HSPs: 7)
Name: scaffold0135
Description:
Target: scaffold0135; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 196
Target Start/End: Complemental strand, 2259 - 2087
Alignment:
| Q |
27 |
tgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatt---tattcatgaattggtttctcttcaaagttgattct |
123 |
Q |
| |
|
|||| |||| ||||||||| |||||||| ||||||||||||||| | | || || ||||||| |||||||||||||||||| ||||||| ||||| || |
|
|
| T |
2259 |
tgaagtttcatctttgataattctccaatcaatatcattaatgaataactttatgaataattcaatattcatgaattggtttcacttcaaaattgatcct |
2160 |
T |
|
| Q |
124 |
aatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatc |
196 |
Q |
| |
|
||||| ||||||||||| | ||| ||||||||||||||||| |||| ||||||||||||||| ||| |||| |
|
|
| T |
2159 |
aatcaatttgatgaaataacaagaataatttcgagtgtaataaacatcttcatcatgagaacattcttccatc |
2087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 196
Target Start/End: Complemental strand, 6474 - 6302
Alignment:
| Q |
27 |
tgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatt---tattcatgaattggtttctcttcaaagttgattct |
123 |
Q |
| |
|
|||| |||| ||||||||| |||||||| ||||||||||||||| | | || || ||||||| |||||||||||||||||| ||||||| ||||| || |
|
|
| T |
6474 |
tgaagtttcatctttgataattctccaatcaatatcattaatgaataactttatgaataattcaatattcatgaattggtttcacttcaaaattgatcct |
6375 |
T |
|
| Q |
124 |
aatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatc |
196 |
Q |
| |
|
||||| ||||||||||| | ||| ||||||||||||||||| |||| ||||||||||||||| ||| |||| |
|
|
| T |
6374 |
aatcaatttgatgaaataacaagaataatttcgagtgtaataaacatcttcatcatgagaacattcttccatc |
6302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 196
Target Start/End: Complemental strand, 10689 - 10517
Alignment:
| Q |
27 |
tgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatt---tattcatgaattggtttctcttcaaagttgattct |
123 |
Q |
| |
|
|||| |||| ||||||||| |||||||| ||||||||||||||| | | || || ||||||| |||||||||||||||||| ||||||| ||||| || |
|
|
| T |
10689 |
tgaagtttcatctttgataattctccaatcaatatcattaatgaataactttatgaataattcaatattcatgaattggtttcacttcaaaattgatcct |
10590 |
T |
|
| Q |
124 |
aatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatc |
196 |
Q |
| |
|
||||| ||||||||||| | ||| ||||||||||||||||| |||| ||||||||||||||| ||| |||| |
|
|
| T |
10589 |
aatcaatttgatgaaataacaagaataatttcgagtgtaataaacatcttcatcatgagaacattcttccatc |
10517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 196
Target Start/End: Complemental strand, 14904 - 14732
Alignment:
| Q |
27 |
tgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatt---tattcatgaattggtttctcttcaaagttgattct |
123 |
Q |
| |
|
|||| |||| ||||||||| |||||||| ||||||||||||||| | | || || ||||||| |||||||||||||||||| ||||||| ||||| || |
|
|
| T |
14904 |
tgaagtttcatctttgataattctccaatcaatatcattaatgaataactttatgaataattcaatattcatgaattggtttcacttcaaaattgatcct |
14805 |
T |
|
| Q |
124 |
aatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatc |
196 |
Q |
| |
|
||||| ||||||||||| | ||| ||||||||||||||||| |||| ||||||||||||||| ||| |||| |
|
|
| T |
14804 |
aatcaatttgatgaaataacaagaataatttcgagtgtaataaacatcttcatcatgagaacattcttccatc |
14732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 196
Target Start/End: Complemental strand, 19119 - 18947
Alignment:
| Q |
27 |
tgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatt---tattcatgaattggtttctcttcaaagttgattct |
123 |
Q |
| |
|
|||| |||| ||||||||| |||||||| ||||||||||||||| | | || || ||||||| |||||||||||||||||| ||||||| ||||| || |
|
|
| T |
19119 |
tgaagtttcatctttgataattctccaatcaatatcattaatgaataactttatgaataattcaatattcatgaattggtttcacttcaaaattgatcct |
19020 |
T |
|
| Q |
124 |
aatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatc |
196 |
Q |
| |
|
||||| ||||||||||| | ||| ||||||||||||||||| |||| ||||||||||||||| ||| |||| |
|
|
| T |
19019 |
aatcaatttgatgaaataacaagaataatttcgagtgtaataaacatcttcatcatgagaacattcttccatc |
18947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 196
Target Start/End: Complemental strand, 23334 - 23162
Alignment:
| Q |
27 |
tgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatt---tattcatgaattggtttctcttcaaagttgattct |
123 |
Q |
| |
|
|||| |||| ||||||||| |||||||| ||||||||||||||| | | || || ||||||| |||||||||||||||||| ||||||| ||||| || |
|
|
| T |
23334 |
tgaagtttcatctttgataattctccaatcaatatcattaatgaataactttatgaataattcaatattcatgaattggtttcacttcaaaattgatcct |
23235 |
T |
|
| Q |
124 |
aatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatc |
196 |
Q |
| |
|
||||| ||||||||||| | ||| ||||||||||||||||| |||| ||||||||||||||| ||| |||| |
|
|
| T |
23234 |
aatcaatttgatgaaataacaagaataatttcgagtgtaataaacatcttcatcatgagaacattcttccatc |
23162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0135; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 196
Target Start/End: Complemental strand, 27549 - 27377
Alignment:
| Q |
27 |
tgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatt---tattcatgaattggtttctcttcaaagttgattct |
123 |
Q |
| |
|
|||| |||| ||||||||| |||||||| ||||||||||||||| | | || || ||||||| |||||||||||||||||| ||||||| ||||| || |
|
|
| T |
27549 |
tgaagtttcatctttgataattctccaatcaatatcattaatgaataactttatgaataattcaatattcatgaattggtttcacttcaaaattgatcct |
27450 |
T |
|
| Q |
124 |
aatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatc |
196 |
Q |
| |
|
||||| ||||||||||| | ||| ||||||||||||||||| |||| ||||||||||||||| ||| |||| |
|
|
| T |
27449 |
aatcaatttgatgaaataacaagaataatttcgagtgtaataaacatcttcatcatgagaacattcttccatc |
27377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0206 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0206
Description:
Target: scaffold0206; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 220
Target Start/End: Complemental strand, 636 - 489
Alignment:
| Q |
74 |
aattaataaataatttattcatgaattggtttctcttcaaagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcct |
173 |
Q |
| |
|
||||||| ||||||| |||||| |||||||||||||||||||||||||||| |||| ||||| | |||||| ||||||||||||||||| |||| | |
|
|
| T |
636 |
aattaatgaataattcattcatcggttggtttctcttcaaagttgattctaattatttcgatgaggtaatgagaataatttcgagtgtaataatcatctt |
537 |
T |
|
| Q |
174 |
catcatgagaacatac-tttcatcggagttgataatgttctcttctat |
220 |
Q |
| |
|
|||||||||||| | | ||||||| |||||||||||||||||||||| |
|
|
| T |
536 |
catcatgagaaccttcttttcatcaaagttgataatgttctcttctat |
489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0206; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 673 - 635
Alignment:
| Q |
16 |
gcatatgatcatgaattttcttctttgatatttctccaa |
54 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
673 |
gcatatgatcatgaattttcttccttgataattctccaa |
635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0959 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0959
Description:
Target: scaffold0959; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 220
Target Start/End: Complemental strand, 2831 - 2625
Alignment:
| Q |
16 |
gcatatgatcatgaattttcttctttgatatttctccaaacaatatcattaatgagtgaattaataaataatt---tattcatgaattggtttctcttca |
112 |
Q |
| |
|
||||||||| | ||| |||| ||||||||| |||| ||| ||| |||||||||| | | || || ||||||| |||||||||||||||||||||| | |
|
|
| T |
2831 |
gcatatgataaggaagtttcatctttgataattcttcaataaatgtcattaatgaat-actttatgaataattcaatattcatgaattggtttctcttta |
2733 |
T |
|
| Q |
113 |
aagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaatatgcatcctcatcatgagaacatactttcatcggagttgataatgttc |
212 |
Q |
| |
|
|| ||||| ||||||||| ||||||||| | |||| ||| || |||||| ||| ||| ||||||||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
2732 |
aaattgatcctaatcattgtgatgaaataaggagaataactttgagtgtcataaaaatcttcatcatgagaacattcttccatcagagttgataatgttc |
2633 |
T |
|
| Q |
213 |
tcttctat |
220 |
Q |
| |
|
|||||||| |
|
|
| T |
2632 |
tcttctat |
2625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0186 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0186
Description:
Target: scaffold0186; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 163
Target Start/End: Complemental strand, 3483 - 3422
Alignment:
| Q |
102 |
gtttctcttcaaagttgattctaatcattttgatgaaatgatgagactaatttcgagtgtaa |
163 |
Q |
| |
|
|||| |||||| ||||||||||||| |||| |||||| | |||| | ||||||||||||||| |
|
|
| T |
3483 |
gtttttcttcagagttgattctaattatttcgatgaagtaatgaaaataatttcgagtgtaa |
3422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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