View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1765_low_5 (Length: 321)

Name: NF1765_low_5
Description: NF1765
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1765_low_5
NF1765_low_5
[»] chr4 (13 HSPs)
chr4 (18-311)||(2796336-2796629)
chr4 (230-279)||(51383996-51384045)
chr4 (236-280)||(20119953-20119997)
chr4 (236-272)||(32369927-32369963)
chr4 (236-275)||(31277036-31277075)
chr4 (236-279)||(36768857-36768900)
chr4 (220-279)||(47040239-47040298)
chr4 (236-278)||(843150-843192)
chr4 (229-279)||(19262932-19262982)
chr4 (240-281)||(1386537-1386578)
chr4 (236-276)||(8457933-8457973)
chr4 (229-281)||(18783978-18784030)
chr4 (229-273)||(35212741-35212785)
[»] chr2 (11 HSPs)
chr2 (60-119)||(29263891-29263949)
chr2 (238-278)||(35198240-35198280)
chr2 (227-279)||(42205843-42205895)
chr2 (236-279)||(28341332-28341375)
chr2 (238-280)||(14667666-14667708)
chr2 (237-275)||(17427321-17427359)
chr2 (219-264)||(14268756-14268801)
chr2 (238-275)||(32102872-32102909)
chr2 (227-279)||(16630794-16630846)
chr2 (240-280)||(38738423-38738463)
chr2 (220-276)||(42043208-42043264)
[»] chr6 (10 HSPs)
chr6 (231-280)||(6284668-6284717)
chr6 (211-280)||(34625717-34625786)
chr6 (241-279)||(32577472-32577510)
chr6 (236-281)||(6294542-6294587)
chr6 (240-280)||(4012732-4012772)
chr6 (242-278)||(4945274-4945310)
chr6 (236-280)||(34598546-34598590)
chr6 (238-281)||(6074523-6074566)
chr6 (217-279)||(18262791-18262854)
chr6 (237-281)||(7564170-7564214)
[»] chr1 (8 HSPs)
chr1 (236-281)||(3451863-3451908)
chr1 (219-279)||(2445861-2445921)
chr1 (236-279)||(26462653-26462696)
chr1 (237-279)||(3148159-3148201)
chr1 (235-276)||(9656775-9656816)
chr1 (238-279)||(29127664-29127705)
chr1 (238-274)||(1118409-1118445)
chr1 (235-279)||(36251257-36251301)
[»] chr5 (8 HSPs)
chr5 (238-281)||(28322251-28322294)
chr5 (219-279)||(9878040-9878100)
chr5 (229-281)||(9895148-9895200)
chr5 (246-281)||(40141299-40141334)
chr5 (229-279)||(16274348-16274397)
chr5 (236-281)||(15086706-15086751)
chr5 (236-281)||(39828474-39828519)
chr5 (219-279)||(32444757-32444817)
[»] chr3 (9 HSPs)
chr3 (236-276)||(49636837-49636877)
chr3 (236-279)||(18268013-18268056)
chr3 (239-279)||(19323456-19323496)
chr3 (236-279)||(47542543-47542586)
chr3 (235-281)||(19730215-19730261)
chr3 (235-281)||(19750805-19750851)
chr3 (221-254)||(9791348-9791381)
chr3 (238-279)||(13725318-13725359)
chr3 (238-266)||(20980954-20980982)
[»] chr7 (11 HSPs)
chr7 (226-279)||(17285062-17285115)
chr7 (231-279)||(26993567-26993615)
chr7 (238-274)||(40826525-40826561)
chr7 (219-262)||(30177029-30177072)
chr7 (236-279)||(46179918-46179961)
chr7 (229-279)||(24401830-24401880)
chr7 (239-281)||(31837762-31837804)
chr7 (238-279)||(27012134-27012175)
chr7 (235-279)||(20204246-20204290)
chr7 (236-276)||(40688891-40688931)
chr7 (236-280)||(44172897-44172941)
[»] chr8 (11 HSPs)
chr8 (217-265)||(10170408-10170456)
chr8 (236-279)||(3066050-3066093)
chr8 (236-279)||(29096954-29096997)
chr8 (236-275)||(31551847-31551886)
chr8 (217-275)||(32145226-32145284)
chr8 (238-280)||(43806203-43806245)
chr8 (226-275)||(1979410-1979459)
chr8 (236-265)||(2517115-2517144)
chr8 (239-268)||(12969205-12969234)
chr8 (236-281)||(13342605-13342650)
chr8 (236-265)||(25799156-25799185)


Alignment Details
Target: chr4 (Bit Score: 282; Significance: 1e-158; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 18 - 311
Target Start/End: Original strand, 2796336 - 2796629
Alignment:
Q  18 aatccttctctgtatggtttagcaccggatgttgttatgcgggatataacattggaggagaggagggctgatttggtaagcatctcaatctttaatttat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2796336 aatccttctctgtatggtttagcaccggatgttgttatgcgggatataacattggaggagaggagggctgatttggtaagcatctcaatctttaatttat 2796435  T
Q  118 cacactcttattattttattattatgttaactaaacaaatgttggtgttattatttggtttattcaaatatgaagcctcaaaatggacccgaccatgaaa 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2796436 cacactcttattattttattattatgttaactaaacaaatgttggtgttattatttggtttattcaaatatgaagcctcaaaatggacccgaccatgaca 2796535  T
Q  218 ttgacacttcaacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgttgatttgattcggacaccgggacccgcctttg 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  2796536 ttgacacttcaacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgttaatttgattcggacaccgggacacgcctttg 2796629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 51384045 - 51383996
Alignment:
Q  230 caccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    ||||||||| |||||| ||||||||| ||||||||| |||||||||||||    
T  51384045 caccattaacaatttgtgaaaatgaaataattgaatgtaatcacatgtgt 51383996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 20119953 - 20119997
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatgtgtt 280  Q
    |||||||||||||||||||| ||||| ||| ||||||||||||||    
T  20119953 taataatttgagaaaatgaaataatttaatgtaatcacatgtgtt 20119997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 32369963 - 32369927
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatca 272  Q
    |||||||||||||||||||||||||||||| ||||||    
T  32369963 taataatttgagaaaatgaattaattgaatgtaatca 32369927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 275
Target Start/End: Complemental strand, 31277075 - 31277036
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacat 275  Q
    |||||||||||||||||||| ||||||||| |||||||||    
T  31277075 taataatttgagaaaatgaactaattgaatgtaatcacat 31277036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 36768900 - 36768857
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    ||||||||||||| ||| |||||||||||| |||||||||||||    
T  36768900 taataatttgagagaattaattaattgaatgtaatcacatgtgt 36768857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 279
Target Start/End: Complemental strand, 47040298 - 47040239
Alignment:
Q  220 gacacttcaacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    ||||| || |||||| | |||||||||||||||||||||| || || |||||||||||||    
T  47040298 gacacgtcgacaccaatgataatttgagaaaatgaattaactggatataatcacatgtgt 47040239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 843192 - 843150
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatgtg 278  Q
    ||||||||||||||||||||||| |||||  ||||||||||||    
T  843192 taataatttgagaaaatgaattatttgaacgtaatcacatgtg 843150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 19262982 - 19262932
Alignment:
Q  229 acaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    |||||| |||||||||||||| ||||  ||||||||| |||||||||||||    
T  19262982 acaccagtaataatttgagaagatgacataattgaatgtaatcacatgtgt 19262932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 281
Target Start/End: Complemental strand, 1386578 - 1386537
Alignment:
Q  240 aatttgagaaaatgaattaattgaatttaatcacatgtgttg 281  Q
    ||||||||||||  |||||||||||| |||||||||||||||    
T  1386578 aatttgagaaaagtaattaattgaatataatcacatgtgttg 1386537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 8457933 - 8457973
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatg 276  Q
    |||||||||||||||||||  ||||||||| ||||||||||    
T  8457933 taataatttgagaaaatgacataattgaatgtaatcacatg 8457973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 18783978 - 18784030
Alignment:
Q  229 acaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgttg 281  Q
    |||| ||| |||||||||||||||||| ||||||||| |||| ||| ||||||    
T  18783978 acacaattcataatttgagaaaatgaagtaattgaatgtaattacacgtgttg 18784030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 35212785 - 35212741
Alignment:
Q  229 acaccattaataatttgagaaaatgaattaattgaatttaatcac 273  Q
    |||||| ||||||||||||||||| || ||||||||| |||||||    
T  35212785 acaccaataataatttgagaaaattaaataattgaatgtaatcac 35212741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 29263891 - 29263949
Alignment:
Q  60 gatataacattggaggagaggagggctgatttggtaagcatctcaatctttaatttatca 119  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||    
T  29263891 gatataacattggaggaaaggagggctgatttggtaagcatctcagt-tttaatttatca 29263949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 35198280 - 35198240
Alignment:
Q  238 ataatttgagaaaatgaattaattgaatttaatcacatgtg 278  Q
    ||||||| |||||||||||||||||||| ||||||||||||    
T  35198280 ataatttaagaaaatgaattaattgaatgtaatcacatgtg 35198240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 42205895 - 42205843
Alignment:
Q  227 caacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    |||||||| ||||||||||||||||||| |||||||||  |||||| ||||||    
T  42205895 caacaccaataataatttgagaaaatgacttaattgaaaataatcatatgtgt 42205843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 28341332 - 28341375
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||    
T  28341332 taatagtttgagaaaatgaattaattaaatgtaatcacatgtgt 28341375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 280
Target Start/End: Original strand, 14667666 - 14667708
Alignment:
Q  238 ataatttgagaaaatgaattaattgaatttaatcacatgtgtt 280  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||    
T  14667666 ataatttgagaaaatgaactaattgaatataatcacatatgtt 14667708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 275
Target Start/End: Complemental strand, 17427359 - 17427321
Alignment:
Q  237 aataatttgagaaaatgaattaattgaatttaatcacat 275  Q
    ||||||||||||||||||||||||||||  |||||||||    
T  17427359 aataatttgagaaaatgaattaattgaaggtaatcacat 17427321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 14268801 - 14268756
Alignment:
Q  219 tgacacttcaacaccattaataatttgagaaaatgaattaattgaa 264  Q
    |||||| ||||||||  ||||||||||||||||||| |||||||||    
T  14268801 tgacacgtcaacaccggtaataatttgagaaaatgacttaattgaa 14268756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 275
Target Start/End: Complemental strand, 32102909 - 32102872
Alignment:
Q  238 ataatttgagaaaatgaattaattgaatttaatcacat 275  Q
    ||||||||||||||| |||||||||||| |||||||||    
T  32102909 ataatttgagaaaataaattaattgaatataatcacat 32102872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 16630794 - 16630846
Alignment:
Q  227 caacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    |||||||  ||||||||| |||||||||  ||||| |||||||||||||||||    
T  16630794 caacaccgataataatttaagaaaatgacataattcaatttaatcacatgtgt 16630846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 38738423 - 38738463
Alignment:
Q  240 aatttgagaaaatgaattaattgaatttaatcacatgtgtt 280  Q
    ||||||||||||| |||||||| ||| ||||||||||||||    
T  38738423 aatttgagaaaattaattaattaaatgtaatcacatgtgtt 38738463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 276
Target Start/End: Complemental strand, 42043264 - 42043208
Alignment:
Q  220 gacacttcaacaccattaataatttgagaaaatgaattaattgaatttaatcacatg 276  Q
    ||||| ||||||||  ||||||||| | |||||||||||||||||| |||| |||||    
T  42043264 gacacatcaacaccgataataatttaataaaatgaattaattgaatgtaataacatg 42043208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 280
Target Start/End: Complemental strand, 6284717 - 6284668
Alignment:
Q  231 accattaataatttgagaaaatgaattaattgaatttaatcacatgtgtt 280  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  6284717 accattaataatttgagaaaatgacataattgaatttaatcacatgtgtt 6284668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 34625717 - 34625786
Alignment:
Q  211 catgaaattgacacttcaacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgtt 280  Q
    ||||||||||| || || |||||  |||||||||||||||||||||||||||||| ||||||||| ||||    
T  34625717 catgaaattgatacatcgacaccgataataatttgagaaaatgaattaattgaatgtaatcacatatgtt 34625786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 279
Target Start/End: Complemental strand, 32577510 - 32577472
Alignment:
Q  241 atttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  32577510 atttgagaaaatgaattaattgaatgtaatcacatgtgt 32577472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 236 - 281
Target Start/End: Complemental strand, 6294587 - 6294542
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatgtgttg 281  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||    
T  6294587 taataatttgagaaaatgaattaattgaatgcaatcgcatgtgttg 6294542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 4012732 - 4012772
Alignment:
Q  240 aatttgagaaaatgaattaattgaatttaatcacatgtgtt 280  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  4012732 aatttgaaaaaatgaattaattgaatataatcacatgtgtt 4012772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 278
Target Start/End: Original strand, 4945274 - 4945310
Alignment:
Q  242 tttgagaaaatgaattaattgaatttaatcacatgtg 278  Q
    |||||||||||||||||||||||| ||||||||||||    
T  4945274 tttgagaaaatgaattaattgaatgtaatcacatgtg 4945310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 280
Target Start/End: Original strand, 34598546 - 34598590
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatgtgtt 280  Q
    ||||||||||||||||||||||||||| || ||||||||| ||||    
T  34598546 taataatttgagaaaatgaattaattggatgtaatcacatatgtt 34598590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 281
Target Start/End: Original strand, 6074523 - 6074566
Alignment:
Q  238 ataatttgagaaaatgaattaattgaatttaatcacatgtgttg 281  Q
    ||||||||||||||||||||| |||||  |||||||||||||||    
T  6074523 ataatttgagaaaatgaattagttgaacgtaatcacatgtgttg 6074566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 279
Target Start/End: Complemental strand, 18262854 - 18262791
Alignment:
Q  217 attgacacttcaacaccattaataatttgagaaaat-gaattaattgaatttaatcacatgtgt 279  Q
    |||||||  ||||||||| ||||||||||| ||||| ||||||||||||  |||||||||||||    
T  18262854 attgacatatcaacaccaataataatttgataaaattgaattaattgaaagtaatcacatgtgt 18262791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 281
Target Start/End: Complemental strand, 7564214 - 7564170
Alignment:
Q  237 aataatttgagaaaatgaattaattgaatttaatcacatgtgttg 281  Q
    |||||||||||||||| |||||||||||| |||||| | ||||||    
T  7564214 aataatttgagaaaataaattaattgaatgtaatcatacgtgttg 7564170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 3451863 - 3451908
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatgtgttg 281  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  3451863 taataatttgagaaaacgaattaattgaatttaatcacatgtgttg 3451908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 2445861 - 2445921
Alignment:
Q  219 tgacacttcaacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    |||||||||||||||| | |||||||||||||||||  ||||| |||||||||| ||||||    
T  2445861 tgacacttcaacaccaatgataatttgagaaaatgacataattcaatttaatcatatgtgt 2445921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 26462696 - 26462653
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    ||||||||| |||||||||| ||||||||| |||||||||||||    
T  26462696 taataatttaagaaaatgaaataattgaatgtaatcacatgtgt 26462653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 279
Target Start/End: Original strand, 3148159 - 3148201
Alignment:
Q  237 aataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    |||||||||||||||| |||||||| ||| |||||||||||||    
T  3148159 aataatttgagaaaataaattaatttaatataatcacatgtgt 3148201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 276
Target Start/End: Complemental strand, 9656816 - 9656775
Alignment:
Q  235 ttaataatttgagaaaatgaattaattgaatttaatcacatg 276  Q
    |||||||||||| ||||||| |||||||||| ||||||||||    
T  9656816 ttaataatttgaaaaaatgatttaattgaatgtaatcacatg 9656775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 29127664 - 29127705
Alignment:
Q  238 ataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    ||||||||||||||||| |||||||||| |||||| ||||||    
T  29127664 ataatttgagaaaatgagttaattgaatgtaatcaaatgtgt 29127705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 274
Target Start/End: Complemental strand, 1118445 - 1118409
Alignment:
Q  238 ataatttgagaaaatgaattaattgaatttaatcaca 274  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  1118445 ataatttgaaaaaatgaattaattgaatgtaatcaca 1118409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 36251301 - 36251257
Alignment:
Q  235 ttaataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    ||||||||||||||||||||| |||| |||| |||| ||||||||    
T  36251301 ttaataatttgagaaaatgaactaatagaatgtaataacatgtgt 36251257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 281
Target Start/End: Original strand, 28322251 - 28322294
Alignment:
Q  238 ataatttgagaaaatgaattaattgaatttaatcacatgtgttg 281  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  28322251 ataatttgagaaaatgaattaattgaatgtaatcacatgtgttg 28322294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 9878100 - 9878040
Alignment:
Q  219 tgacacttcaacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    |||||| || |||||| |||||||||||||| ||||||||||||||| ||||||| |||||    
T  9878100 tgacacgtcgacaccaataataatttgagaatatgaattaattgaatgtaatcacttgtgt 9878040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 9895148 - 9895200
Alignment:
Q  229 acaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgttg 281  Q
    |||||| ||||||||||||||||| ||||| |||||  |||||||||||||||    
T  9895148 acaccagtaataatttgagaaaataaattatttgaacgtaatcacatgtgttg 9895200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 281
Target Start/End: Original strand, 40141299 - 40141334
Alignment:
Q  246 agaaaatgaattaattgaatttaatcacatgtgttg 281  Q
    |||||||||||||||||||||||| |||||||||||    
T  40141299 agaaaatgaattaattgaatttaaccacatgtgttg 40141334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 16274397 - 16274348
Alignment:
Q  229 acaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    |||||| ||| ||||||||||| |||||||||||||| |||||||||||||    
T  16274397 acaccagtaaaaatttgagaaa-tgaattaattgaatgtaatcacatgtgt 16274348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 15086706 - 15086751
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatgtgttg 281  Q
    ||||||||||||||| ||||||| |||||  |||||||||||||||    
T  15086706 taataatttgagaaagtgaattatttgaacgtaatcacatgtgttg 15086751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 39828474 - 39828519
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatgtgttg 281  Q
    |||||||||||||| ||||| ||||||||| ||| |||||||||||    
T  39828474 taataatttgagaatatgaaataattgaatgtaaccacatgtgttg 39828519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 32444757 - 32444817
Alignment:
Q  219 tgacacttcaacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    |||||| ||||||||||||| |||||||||| ||||  ||||| ||| |||||| ||||||    
T  32444757 tgacacgtcaacaccattaacaatttgagaagatgacataattcaatgtaatcaaatgtgt 32444817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000007; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 49636877 - 49636837
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatg 276  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  49636877 taataatttgagaaaatgaattaattgaatgtaatcacatg 49636837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 18268056 - 18268013
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    |||||||||||||||||||||||||||||  |||||||||||||    
T  18268056 taataatttgagaaaatgaattaattgaacgtaatcacatgtgt 18268013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 279
Target Start/End: Complemental strand, 19323496 - 19323456
Alignment:
Q  239 taatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  19323496 taatttgagaaaatgacataattgaatttaatcacatgtgt 19323456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 47542543 - 47542586
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    |||||||||||||||||||| || |||||| |||||||||||||    
T  47542543 taataatttgagaaaatgaactatttgaatgtaatcacatgtgt 47542586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 19730261 - 19730215
Alignment:
Q  235 ttaataatttgagaaaatgaattaattgaatttaatcacatgtgttg 281  Q
    ||||||||||||||||||||  ||||||||| | |||||||||||||    
T  19730261 ttaataatttgagaaaatgacataattgaatgtgatcacatgtgttg 19730215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 19750851 - 19750805
Alignment:
Q  235 ttaataatttgagaaaatgaattaattgaatttaatcacatgtgttg 281  Q
    ||||||||||||||||||||  ||||||||| | |||||||||||||    
T  19750851 ttaataatttgagaaaatgacataattgaatgtgatcacatgtgttg 19750805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 254
Target Start/End: Original strand, 9791348 - 9791381
Alignment:
Q  221 acacttcaacaccattaataatttgagaaaatga 254  Q
    |||||| |||||||||||||||||||||||||||    
T  9791348 acactttaacaccattaataatttgagaaaatga 9791381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 13725318 - 13725359
Alignment:
Q  238 ataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    ||||| ||||||||||||||||||||||  ||||||||||||    
T  13725318 ataatatgagaaaatgaattaattgaatgaaatcacatgtgt 13725359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 266
Target Start/End: Complemental strand, 20980982 - 20980954
Alignment:
Q  238 ataatttgagaaaatgaattaattgaatt 266  Q
    |||||||||||||||||||||||||||||    
T  20980982 ataatttgagaaaatgaattaattgaatt 20980954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000005; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 17285062 - 17285115
Alignment:
Q  226 tcaacaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    ||||||||| ||||||||||||| |||||  ||||| |||||||||||||||||    
T  17285062 tcaacaccaataataatttgagagaatgatataattcaatttaatcacatgtgt 17285115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 26993615 - 26993567
Alignment:
Q  231 accattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    ||||||||||||||||||||||||| ||| |||||  ||||||||||||    
T  26993615 accattaataatttgagaaaatgaagtaactgaatgcaatcacatgtgt 26993567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 274
Target Start/End: Original strand, 40826525 - 40826561
Alignment:
Q  238 ataatttgagaaaatgaattaattgaatttaatcaca 274  Q
    |||||||||||||||||||||||||||| ||||||||    
T  40826525 ataatttgagaaaatgaattaattgaatataatcaca 40826561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 30177072 - 30177029
Alignment:
Q  219 tgacacttcaacaccattaataatttgagaaaatgaattaattg 262  Q
    |||||| ||||||||| |||||||||||||||||||| ||||||    
T  30177072 tgacacgtcaacaccagtaataatttgagaaaatgaagtaattg 30177029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 46179961 - 46179918
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    |||||| |||||||||| |||||||||||| |||||||||||||    
T  46179961 taataagttgagaaaataaattaattgaatataatcacatgtgt 46179918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 279
Target Start/End: Original strand, 24401830 - 24401880
Alignment:
Q  229 acaccattaataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    |||||| ||| | |||||||||||| ||||||||||| |||||||||||||    
T  24401830 acaccagtaaaattttgagaaaatggattaattgaatgtaatcacatgtgt 24401880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 281
Target Start/End: Original strand, 31837762 - 31837804
Alignment:
Q  239 taatttgagaaaatgaattaattgaatttaatcacatgtgttg 281  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||    
T  31837762 taatttgagaaaatgaaataattgaatgtaatctcatgtgttg 31837804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 27012134 - 27012175
Alignment:
Q  238 ataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    |||||||||||||||||||||||| ||| || ||||||||||    
T  27012134 ataatttgagaaaatgaattaattaaatgtattcacatgtgt 27012175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 20204246 - 20204290
Alignment:
Q  235 ttaataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    |||||||||||||||||||||| | |||||  |||||||||||||    
T  20204246 ttaataatttgagaaaatgaatcatttgaacgtaatcacatgtgt 20204290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 276
Target Start/End: Original strand, 40688891 - 40688931
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatg 276  Q
    ||||||||||| |||||||||||||| ||| ||||||||||    
T  40688891 taataatttgataaaatgaattaattaaatgtaatcacatg 40688931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 280
Target Start/End: Complemental strand, 44172941 - 44172897
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatgtgtt 280  Q
    |||||||||||||||||||  ||||| ||| ||||||||||||||    
T  44172941 taataatttgagaaaatgacataattcaatgtaatcacatgtgtt 44172897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 10170456 - 10170408
Alignment:
Q  217 attgacacttcaacaccattaataatttgagaaaatgaattaattgaat 265  Q
    |||| ||| ||||||||| ||||||||||||||||| ||||||||||||    
T  10170456 attggcacgtcaacaccaataataatttgagaaaataaattaattgaat 10170408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 3066050 - 3066093
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||    
T  3066050 taataatttgagaaaatggattaattgaatgtaataacatgtgt 3066093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 279
Target Start/End: Original strand, 29096954 - 29096997
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatgtgt 279  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||    
T  29096954 taataatttaagaaaataaattaattgaatgtaatcacatgtgt 29096997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 275
Target Start/End: Complemental strand, 31551886 - 31551847
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacat 275  Q
    ||||||||||||||||||||| |||||||| |||||||||    
T  31551886 taataatttgagaaaatgaataaattgaatataatcacat 31551847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 32145226 - 32145284
Alignment:
Q  217 attgacacttcaacaccattaataatttgagaaaatgaattaattgaatttaatcacat 275  Q
    |||||||||| ||||||| |||||||||||||||||| | ||||| ||  |||||||||    
T  32145226 attgacactttaacaccagtaataatttgagaaaatggaataattaaacgtaatcacat 32145284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 280
Target Start/End: Complemental strand, 43806245 - 43806203
Alignment:
Q  238 ataatttgagaaaatgaattaattgaatttaatcacatgtgtt 280  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||    
T  43806245 ataatttaagaaaatgaattaattgaatataatcacatatgtt 43806203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 1979410 - 1979459
Alignment:
Q  226 tcaacaccattaataatttgagaaaatgaattaattgaatttaatcacat 275  Q
    ||||||||  ||||||||||||||||| |||||||| ||| |||||||||    
T  1979410 tcaacaccggtaataatttgagaaaattaattaattaaatgtaatcacat 1979459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 265
Target Start/End: Original strand, 2517115 - 2517144
Alignment:
Q  236 taataatttgagaaaatgaattaattgaat 265  Q
    ||||||||||||||||||||||||||||||    
T  2517115 taataatttgagaaaatgaattaattgaat 2517144  T

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Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 268
Target Start/End: Original strand, 12969205 - 12969234
Alignment:
Q  239 taatttgagaaaatgaattaattgaattta 268  Q
    ||||||||||||||||||||||||||||||    
T  12969205 taatttgagaaaatgaattaattgaattta 12969234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 13342605 - 13342650
Alignment:
Q  236 taataatttgagaaaatgaattaattgaatttaatcacatgtgttg 281  Q
    ||||||||||| |||||||| ||||| |||| ||||||||||||||    
T  13342605 taataatttgataaaatgaaataattaaattcaatcacatgtgttg 13342650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 265
Target Start/End: Original strand, 25799156 - 25799185
Alignment:
Q  236 taataatttgagaaaatgaattaattgaat 265  Q
    ||||||||||||||||||||||||||||||    
T  25799156 taataatttgagaaaatgaattaattgaat 25799185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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