View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17660_high_18 (Length: 345)
Name: NF17660_high_18
Description: NF17660
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17660_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 29 - 323
Target Start/End: Original strand, 34335441 - 34335734
Alignment:
| Q |
29 |
agctatgatggagttaggggagggactatgtaaactgagaaagatggagttccctaatggaccgtttcttaagtttgagaaagatgtttcagcagttttg |
128 |
Q |
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| T |
34335441 |
agctatgatggagttaggggagggactatgtaaactgagaaagatggagttccctaatggaccgtttcttaagtttgagaaagatatttcagcagttttg |
34335540 |
T |
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| Q |
129 |
gaatttatctaccagacacaaatagagttagctgcatgtgagtaatttcattcttgaaatgttaggtatcacatgatacatgcaagttgtatcttaatcc |
228 |
Q |
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| T |
34335541 |
gaatttatctaccagacgcaaatagagttagctgcatgtgagtaattccattcttg-aatgttaggtatcacatgatacatgcaagttgtatcttaatcc |
34335639 |
T |
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| Q |
229 |
gaatcaaaatcgaactcaacgaacacaaatgttatatgattggttttggagaaattacannnnnnnnaacttgaatttgagcaggtagtgatgat |
323 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
34335640 |
gaatcaaaatcgaactcaacgaacacaaatgttatatgattggttttggagaaattacattttttttaacttgaatttgagcaggtagtgatgat |
34335734 |
T |
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