View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17661_high_14 (Length: 421)
Name: NF17661_high_14
Description: NF17661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17661_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 388; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 1 - 412
Target Start/End: Complemental strand, 6352334 - 6351924
Alignment:
| Q |
1 |
ggcttgtatacttctcacatctcaatgttatcaaaggatcttcctgccatgtgactaagctctcagtgcattcatctccttatactttaggcgttacgtc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
6352334 |
ggcttgtatacttctcacatctcaatgttatcaaaggatcttcctgccatgtgactaagctctcactgcattcatctccttatactttaggcgttacgtc |
6352235 |
T |
|
| Q |
101 |
aaataataattctgtcatttgtaataaaatgcaacatatgattctactttggtatcaagtaaatccatttggtatgctagctaggccatgctaatggtca |
200 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6352234 |
aaataataattctgtcatttgtaataaaatgcaaactatgattctactttggtatcaagtaaatccatttggtatgctagctaggccatgctaatggtca |
6352135 |
T |
|
| Q |
201 |
atttgtcaaaaatgtaatttccatctgtaatataccaattgctagtaaagaactttatggtttttgtaattcttgctgtgttggtaaatcacatcgatta |
300 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6352134 |
att-gtcaaaaatgtaatttccatctgtaatataccaattgctagtaaagaactttatggtttttgtaattcttgctgtgttggtaaatcacatcgatta |
6352036 |
T |
|
| Q |
301 |
catactccactttccattactattcattctaaattatttgaagtaattcacacaaaattacggagccctactcctgagccatcacattttagctacacct |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
6352035 |
catactccactttccattactattcattctaaattatttgaagtaattcacacaaaattacggagccctactcctgagccatcacattttagttacacct |
6351936 |
T |
|
| Q |
401 |
ttgtatattctt |
412 |
Q |
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|||||||||||| |
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| T |
6351935 |
ttgtatattctt |
6351924 |
T |
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