View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17661_low_2 (Length: 820)

Name: NF17661_low_2
Description: NF17661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17661_low_2
NF17661_low_2
[»] chr2 (14 HSPs)
chr2 (622-804)||(34176604-34176786)
chr2 (726-805)||(9050117-9050196)
chr2 (726-797)||(16576252-16576323)
chr2 (630-719)||(2248953-2249042)
chr2 (726-790)||(35370402-35370466)
chr2 (628-715)||(16576215-16576302)
chr2 (649-720)||(16863445-16863515)
chr2 (726-804)||(16863460-16863538)
chr2 (648-715)||(38576958-38577025)
chr2 (726-804)||(13712743-13712821)
chr2 (672-720)||(13712766-13712814)
chr2 (732-804)||(38576930-38577002)
chr2 (757-804)||(1027407-1027454)
chr2 (729-804)||(13712912-13712987)
[»] chr5 (13 HSPs)
chr5 (726-803)||(2243310-2243387)
chr5 (648-801)||(972816-972963)
chr5 (726-803)||(14138549-14138626)
chr5 (736-797)||(39808232-39808293)
chr5 (732-804)||(7982373-7982445)
chr5 (722-802)||(22780339-22780419)
chr5 (726-805)||(973115-973194)
chr5 (668-707)||(14138552-14138591)
chr5 (664-715)||(41264532-41264583)
chr5 (729-788)||(41264536-41264595)
chr5 (740-790)||(39730313-39730363)
chr5 (668-713)||(2243339-2243384)
chr5 (763-804)||(17739907-17739948)
[»] chr1 (11 HSPs)
chr1 (726-803)||(68101-68178)
chr1 (726-803)||(52432665-52432742)
chr1 (726-803)||(10775167-10775244)
chr1 (726-782)||(46080975-46081031)
chr1 (728-800)||(3231964-3232036)
chr1 (671-715)||(10775173-10775217)
chr1 (648-715)||(2534437-2534504)
chr1 (668-707)||(24873772-24873811)
chr1 (668-707)||(24874605-24874644)
chr1 (738-804)||(2534409-2534475)
chr1 (654-715)||(52432654-52432715)
[»] chr7 (7 HSPs)
chr7 (649-713)||(43208734-43208798)
chr7 (726-804)||(23944080-23944158)
chr7 (726-803)||(32138880-32138957)
chr7 (742-797)||(34891385-34891440)
chr7 (726-797)||(34891537-34891608)
chr7 (631-689)||(32988565-32988623)
chr7 (628-705)||(27651540-27651616)
[»] chr8 (9 HSPs)
chr8 (649-719)||(7590332-7590402)
chr8 (726-804)||(32166628-32166706)
chr8 (732-805)||(6630531-6630604)
chr8 (727-804)||(12736059-12736136)
chr8 (726-803)||(35574634-35574711)
chr8 (649-712)||(34695817-34695880)
chr8 (630-719)||(31475009-31475096)
chr8 (736-797)||(37010345-37010406)
chr8 (763-804)||(40700887-40700928)
[»] chr6 (1 HSPs)
chr6 (729-795)||(32047181-32047247)
[»] chr3 (6 HSPs)
chr3 (726-790)||(39341203-39341267)
chr3 (726-789)||(54437810-54437873)
chr3 (728-804)||(20519289-20519365)
chr3 (675-715)||(39341213-39341253)
chr3 (738-804)||(54437653-54437719)
chr3 (668-717)||(54437813-54437862)
[»] chr4 (6 HSPs)
chr4 (726-797)||(15131575-15131646)
chr4 (648-719)||(20512844-20512915)
chr4 (726-805)||(22050856-22050935)
chr4 (668-719)||(25062497-25062548)
chr4 (743-804)||(25062340-25062401)
chr4 (742-790)||(20512834-20512882)
[»] scaffold0047 (1 HSPs)
scaffold0047 (726-795)||(62729-62798)
[»] scaffold1743 (1 HSPs)
scaffold1743 (648-715)||(771-837)
[»] scaffold0564 (1 HSPs)
scaffold0564 (649-719)||(5452-5522)


Alignment Details
Target: chr2 (Bit Score: 147; Significance: 4e-77; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 622 - 804
Target Start/End: Original strand, 34176604 - 34176786
Alignment:
Q  622 aatataccctatcagagaacaattatattttcttcatctttatttctacaatcagttaccattttcattttaagaatatcaaacttcttcatcttctttg 721  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||      
T  34176604 aatataccctattagagaacaattatattttcttcatctttatttctacaatcagttaccattttcatcttaagaatatcaaacttcttcatcttcttca 34176703  T
Q  722 ttactcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatctc 804  Q
    |||||||||||||||||||| ||| ||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  34176704 ttactcttacaatcagttactattatcaccttaggaacatcaaaattcttcatctccttcatttaacatatgatcttcatctc 34176786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 726 - 805
Target Start/End: Complemental strand, 9050196 - 9050117
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatctca 805  Q
    |||||| |||||||||||||||||| | | ||||| ||||||||||||||||| ||||| |||||||||||| |||||||    
T  9050196 tcttacgatcagttaccattttcatatgaagaacaacaaacttcttcatctccatcattcaacatatgatctccatctca 9050117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 726 - 797
Target Start/End: Original strand, 16576252 - 16576323
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatct 797  Q
    ||||||||||| ||||||||||| ||| | ||||| ||||||||||||||||||||||| ||||| ||||||    
T  16576252 tcttacaatcaattaccattttcctctcaagaacatcaaacttcttcatctccttcattcaacatgtgatct 16576323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 630 - 719
Target Start/End: Complemental strand, 2249042 - 2248953
Alignment:
Q  630 ctatcagagaacaattatattttcttcatctttatttctacaatcagttaccattttcattttaagaatatcaaacttcttcatcttctt 719  Q
    |||||| |||| ||| ||||||||||||||||||||  || ||| ||||||||||||||| | || || || ||||||||||||||||||    
T  2249042 ctatcaaagaaaaatcatattttcttcatctttattcttagaattagttaccattttcatctcaaaaacattaaacttcttcatcttctt 2248953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 726 - 790
Target Start/End: Original strand, 35370402 - 35370466
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacat 790  Q
    |||||||||||||||||||||| |||| | ||| ||||||||||||| ||||||||||| |||||    
T  35370402 tcttacaatcagttaccattttaatctcaagaataccaaacttcttcgtctccttcattcaacat 35370466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 628 - 715
Target Start/End: Original strand, 16576215 - 16576302
Alignment:
Q  628 ccctatcagagaacaattatattttcttcatctttatttctacaatcagttaccattttcattttaagaatatcaaacttcttcatct 715  Q
    |||||||| |||| |||||| ||||||||| |||| ||  |||||||| ||||||||||| | | ||||| |||||||||||||||||    
T  16576215 ccctatcaaagaaaaattatcttttcttcaccttttttcttacaatcaattaccattttcctctcaagaacatcaaacttcttcatct 16576302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 649 - 720
Target Start/End: Original strand, 16863445 - 16863515
Alignment:
Q  649 ttttcttcatctttatttctacaatcagttaccattttcattttaagaatatcaaacttcttcatcttcttt 720  Q
    |||||||| ||||||||  |||||||||||||||||||||| | ||||| |||||| |||||||||||||||    
T  16863445 ttttcttc-tctttattcttacaatcagttaccattttcatctcaagaacatcaaatttcttcatcttcttt 16863515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 726 - 804
Target Start/End: Original strand, 16863460 - 16863538
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatctc 804  Q
    ||||||||||||||||||||||||||| | ||||| |||| |||||||||| ||| ||| || || |||||| ||||||    
T  16863460 tcttacaatcagttaccattttcatctcaagaacatcaaatttcttcatcttctttattcaatatgtgatctacatctc 16863538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 648 - 715
Target Start/End: Complemental strand, 38577025 - 38576958
Alignment:
Q  648 attttcttcatctttatttctacaatcagttaccattttcattttaagaatatcaaacttcttcatct 715  Q
    ||||||||||| ||||||| || ||||||||||||||||||| | ||||| || ||| ||||||||||    
T  38577025 attttcttcatatttatttttataatcagttaccattttcatctaaagaacattaaagttcttcatct 38576958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 726 - 804
Target Start/End: Complemental strand, 13712821 - 13712743
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatctc 804  Q
    |||||| |||||||||||||| ||||||| ||||| |||||||||| |||| ||| ||| ||||| | |||| ||||||    
T  13712821 tcttactatcagttaccatttccatcttaagaacatcaaacttctttatcttctttattcaacatctaatctccatctc 13712743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 720
Target Start/End: Complemental strand, 13712814 - 13712766
Alignment:
Q  672 atcagttaccattttcattttaagaatatcaaacttcttcatcttcttt 720  Q
    |||||||||||||| ||| ||||||| |||||||||||| |||||||||    
T  13712814 atcagttaccatttccatcttaagaacatcaaacttctttatcttcttt 13712766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 732 - 804
Target Start/End: Complemental strand, 38577002 - 38576930
Alignment:
Q  732 aatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatctc 804  Q
    ||||||||||||||||||||| | |||||  ||| ||||||||||| |||||| ||||| |||| | ||||||    
T  38577002 aatcagttaccattttcatctaaagaacattaaagttcttcatctctttcattcaacatgtgatttccatctc 38576930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 804
Target Start/End: Complemental strand, 1027454 - 1027407
Alignment:
Q  757 aacaccaaacttcttcatctccttcatttaacatatgatcttcatctc 804  Q
    |||| |||||||||| ||||  ||||||||||||||||||||||||||    
T  1027454 aacatcaaacttctttatcttattcatttaacatatgatcttcatctc 1027407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 804
Target Start/End: Complemental strand, 13712987 - 13712912
Alignment:
Q  729 tacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatctc 804  Q
    ||||||| ||||||||||| ||||||  ||   ||||||| || |||||||||||||||||| |||||| ||||||    
T  13712987 tacaatcggttaccatttttatcttaaaaatttcaaacttttttatctccttcatttaacatgtgatctacatctc 13712912  T

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Target: chr5 (Bit Score: 46; Significance: 8e-17; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 726 - 803
Target Start/End: Complemental strand, 2243387 - 2243310
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatct 803  Q
    ||||||||| ||||||||||||||||| | ||||| ||||||||||||| ||||||||| ||||| |||||| |||||    
T  2243387 tcttacaattagttaccattttcatctcaagaacatcaaacttcttcatatccttcattcaacatgtgatctccatct 2243310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 648 - 801
Target Start/End: Original strand, 972816 - 972963
Alignment:
Q  648 attttcttcatctttatttctacaatcagttaccattttcattttaagaatatcaaacttcttcatcttctttgttactcttacaatcagttaccatttt 747  Q
    ||||| ||| ||||||||| || ||| ||||| ||||||||| | ||||| |||||||||||||||||      ||| | ||  |||||||| |||||||    
T  972816 atttttttcctctttatttttaaaattagttatcattttcatctcaagaacatcaaacttcttcatct------ttatttttgaaatcagttgccatttt 972909  T
Q  748 catcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcat 801  Q
    ||||  | ||| | |||| ||||||||||| |||||||||||| | ||||||||    
T  972910 catcacaagaaaatcaaatttcttcatctctttcatttaacatgttatcttcat 972963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 803
Target Start/End: Original strand, 14138549 - 14138626
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatct 803  Q
    ||||||||||| ||||||||||||||||| ||| | |||||||  ||||||| |||||| ||||| | ||||||||||    
T  14138549 tcttacaatcaattaccattttcatcttaagaatatcaaactttctcatctctttcattcaacatgtaatcttcatct 14138626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 736 - 797
Target Start/End: Complemental strand, 39808293 - 39808232
Alignment:
Q  736 agttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatct 797  Q
    ||||| |||||||| |||| || || ||||||| ||||||||||||||||||||||||||||    
T  39808293 agttatcattttcaccttaagaccatcaaactttttcatctccttcatttaacatatgatct 39808232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 732 - 804
Target Start/End: Complemental strand, 7982445 - 7982373
Alignment:
Q  732 aatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatctc 804  Q
    ||||||||||||||||||||||  ||||| |||| ||||||  ||| ||| |||||||| |||| ||||||||    
T  7982445 aatcagttaccattttcatcttgagaacatcaaatttcttcgactctttcttttaacatgtgatattcatctc 7982373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 722 - 802
Target Start/End: Complemental strand, 22780419 - 22780339
Alignment:
Q  722 ttactcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatc 802  Q
    ||||| || |||| ||| ||||||||||||| |  ||||  |||||||||||| ||||||||| ||||| |||||||||||    
T  22780419 ttactatttcaatgagtcaccattttcatctcaaaaacaataaacttcttcatatccttcattcaacatgtgatcttcatc 22780339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 726 - 805
Target Start/End: Original strand, 973115 - 973194
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatctca 805  Q
    ||||||||| ||||| |||||| |||| |  ||||  ||| |||||||||||||| ||| ||||| ||||||||||||||    
T  973115 tcttacaattagttatcatttttatctcaaaaacattaaatttcttcatctcctttattcaacatgtgatcttcatctca 973194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 668 - 707
Target Start/End: Original strand, 14138552 - 14138591
Alignment:
Q  668 tacaatcagttaccattttcattttaagaatatcaaactt 707  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  14138552 tacaatcaattaccattttcatcttaagaatatcaaactt 14138591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 715
Target Start/End: Original strand, 41264532 - 41264583
Alignment:
Q  664 tttctacaatcagttaccattttcattttaagaatatcaaacttcttcatct 715  Q
    ||||||||||||||||| |||||||| | ||||| |||||| ||||||||||    
T  41264532 tttctacaatcagttacaattttcatatcaagaacatcaaatttcttcatct 41264583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 788
Target Start/End: Original strand, 41264536 - 41264595
Alignment:
Q  729 tacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaac 788  Q
    ||||||||||||| |||||||| | | ||||| |||| ||||||||||| ||||||||||    
T  41264536 tacaatcagttacaattttcatatcaagaacatcaaatttcttcatctctttcatttaac 41264595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 740 - 790
Target Start/End: Complemental strand, 39730363 - 39730313
Alignment:
Q  740 accattttcatcttaggaacaccaaacttcttcatctccttcatttaacat 790  Q
    ||||||||||||| | ||||| ||||||| |||||||| ||||||||||||    
T  39730363 accattttcatctcaagaacatcaaactttttcatctctttcatttaacat 39730313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 668 - 713
Target Start/End: Complemental strand, 2243384 - 2243339
Alignment:
Q  668 tacaatcagttaccattttcattttaagaatatcaaacttcttcat 713  Q
    |||||| ||||||||||||||| | ||||| |||||||||||||||    
T  2243384 tacaattagttaccattttcatctcaagaacatcaaacttcttcat 2243339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 763 - 804
Target Start/End: Original strand, 17739907 - 17739948
Alignment:
Q  763 aaacttcttcatctccttcatttaacatatgatcttcatctc 804  Q
    |||||||||||||| ||||||||||||| |||| ||||||||    
T  17739907 aaacttcttcatcttcttcatttaacatgtgattttcatctc 17739948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 726 - 803
Target Start/End: Original strand, 68101 - 68178
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatct 803  Q
    ||||||||| |||||||||||| || | | ||||| | ||||||||||||||||||||||||||| |||||| |||||    
T  68101 tcttacaatgagttaccatttttatttcaagaacatctaacttcttcatctccttcatttaacatgtgatctccatct 68178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 726 - 803
Target Start/End: Original strand, 52432665 - 52432742
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatct 803  Q
    ||||| ||||| ||||||||||||||| | |||||  |||||||||||||||||||||||||||  |||||| |||||    
T  52432665 tcttataatcaattaccattttcatctcaagaacattaaacttcttcatctccttcatttaacaagtgatctccatct 52432742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 803
Target Start/End: Original strand, 10775167 - 10775244
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatct 803  Q
    ||||| ||||| ||||||||||||||||| ||||| |||||||||||||||| ||| || ||||| | || |||||||    
T  10775167 tcttagaatcaattaccattttcatcttaagaacatcaaacttcttcatctctttcgttcaacatctaattttcatct 10775244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 726 - 782
Target Start/End: Original strand, 46080975 - 46081031
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttca 782  Q
    ||||||||||| ||||||||||||||| | |||||  ||||||||||||||||||||    
T  46080975 tcttacaatcaattaccattttcatctcaagaacattaaacttcttcatctccttca 46081031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 728 - 800
Target Start/End: Original strand, 3231964 - 3232036
Alignment:
Q  728 ttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttca 800  Q
    |||||||||||| | |||||||||| | ||||| ||||||||||||| || |||||| ||||| |||| ||||    
T  3231964 ttacaatcagttgctattttcatctcaagaacaacaaacttcttcatgtcattcattcaacatgtgatattca 3232036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 671 - 715
Target Start/End: Original strand, 10775173 - 10775217
Alignment:
Q  671 aatcagttaccattttcattttaagaatatcaaacttcttcatct 715  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||||    
T  10775173 aatcaattaccattttcatcttaagaacatcaaacttcttcatct 10775217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 715
Target Start/End: Complemental strand, 2534504 - 2534437
Alignment:
Q  648 attttcttcatctttatttctacaatcagttaccattttcattttaagaatatcaaacttcttcatct 715  Q
    ||||||||||||||||||| || ||| | |||||| |||||| | || || |||||||||||||||||    
T  2534504 attttcttcatctttatttttaaaataatttaccactttcatctcaaaaacatcaaacttcttcatct 2534437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 668 - 707
Target Start/End: Original strand, 24873772 - 24873811
Alignment:
Q  668 tacaatcagttaccattttcattttaagaatatcaaactt 707  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  24873772 tacaatcaattaccattttcattttaagaagatcaaactt 24873811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 668 - 707
Target Start/End: Original strand, 24874605 - 24874644
Alignment:
Q  668 tacaatcagttaccattttcattttaagaatatcaaactt 707  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  24874605 tacaatcaattaccattttcattttaagaagatcaaactt 24874644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 738 - 804
Target Start/End: Complemental strand, 2534475 - 2534409
Alignment:
Q  738 ttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatctc 804  Q
    |||||| |||||||| |  |||| ||||||||||||||||||| ||||  |||| ||||||||||||    
T  2534475 ttaccactttcatctcaaaaacatcaaacttcttcatctccttaatttcgcataagatcttcatctc 2534409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 715
Target Start/End: Original strand, 52432654 - 52432715
Alignment:
Q  654 ttcatctttatttctacaatcagttaccattttcattttaagaatatcaaacttcttcatct 715  Q
    ||||||||||||  || ||||| ||||||||||||| | ||||| || ||||||||||||||    
T  52432654 ttcatctttattcttataatcaattaccattttcatctcaagaacattaaacttcttcatct 52432715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 649 - 713
Target Start/End: Original strand, 43208734 - 43208798
Alignment:
Q  649 ttttcttcatctttatttctacaatcagttaccattttcattttaagaatatcaaacttcttcat 713  Q
    |||||||||||||||||  |||||||| |||||||||| ||||||||||||||||| | ||||||    
T  43208734 ttttcttcatctttattcttacaatcaattaccatttttattttaagaatatcaaattccttcat 43208798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 726 - 804
Target Start/End: Original strand, 23944080 - 23944158
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatctc 804  Q
    ||||||||| |||| |||||||||||||| ||||| ||||||||||| |||| |||||| ||||| |||| | ||||||    
T  23944080 tcttacaattagttgccattttcatcttaagaacatcaaacttcttcttctctttcattcaacatgtgatttccatctc 23944158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 803
Target Start/End: Complemental strand, 32138957 - 32138880
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatct 803  Q
    ||||| ||||| ||||||||||||||||| ||||| |||| ||||||||||||||| || ||||| | |||| |||||    
T  32138957 tcttaaaatcaattaccattttcatcttaagaacatcaaaattcttcatctccttcgttcaacatgtaatctccatct 32138880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 742 - 797
Target Start/End: Original strand, 34891385 - 34891440
Alignment:
Q  742 cattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatct 797  Q
    ||||||||| ||| ||||| |||||||||| |||| ||||||||||||| ||||||    
T  34891385 cattttcatattaagaacatcaaacttctttatcttcttcatttaacatgtgatct 34891440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 726 - 797
Target Start/End: Original strand, 34891537 - 34891608
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatct 797  Q
    |||||| || ||||| |||||| |||| | ||||| |||| |||||||||||||||||| ||||| ||||||    
T  34891537 tcttactattagttatcattttgatctcaagaacatcaaatttcttcatctccttcattcaacatgtgatct 34891608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 631 - 689
Target Start/End: Complemental strand, 32988623 - 32988565
Alignment:
Q  631 tatcagagaacaattatattttcttcatctttatttctacaatcagttaccattttcat 689  Q
    ||||| |||| ||| ||||||||||||||||||||  ||||||||| || |||||||||    
T  32988623 tatcaaagaaaaatcatattttcttcatctttattcttacaatcagctatcattttcat 32988565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 628 - 705
Target Start/End: Complemental strand, 27651616 - 27651540
Alignment:
Q  628 ccctatcagagaacaattatattttcttcatctttatttctacaatcagttaccattttcattttaagaatatcaaac 705  Q
    |||||||| |||| ||||   |||||||||||||||||| |||||| ||| ||||||||||| | ||||| |||||||    
T  27651616 ccctatcaaagaaaaattcatttttcttcatctttatttttacaat-agtaaccattttcatctcaagaacatcaaac 27651540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 649 - 719
Target Start/End: Complemental strand, 7590402 - 7590332
Alignment:
Q  649 ttttcttcatctttatttctacaatcagttaccattttcattttaagaatatcaaacttcttcatcttctt 719  Q
    |||||||| ||||||||  ||||||| ||||||| |||||||| ||||| |||||| ||||||||||||||    
T  7590402 ttttcttcgtctttattcttacaatcggttaccaatttcatttcaagaacatcaaatttcttcatcttctt 7590332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 726 - 804
Target Start/End: Complemental strand, 32166706 - 32166628
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatctc 804  Q
    |||||| |||| ||| ||||||||||| | ||||| ||||||||||||||||||| ||| ||||| | |||||||||||    
T  32166706 tcttactatcaattatcattttcatctcaagaacatcaaacttcttcatctcctttattcaacatgtaatcttcatctc 32166628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 732 - 805
Target Start/End: Complemental strand, 6630604 - 6630531
Alignment:
Q  732 aatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatctca 805  Q
    ||||| ||||||||||||||||| || ||  ||| |||||||||||||||||||||||  |||||| |||||||    
T  6630604 aatcaattaccattttcatcttaagatcattaaatttcttcatctccttcatttaacaagtgatctccatctca 6630531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 727 - 804
Target Start/End: Original strand, 12736059 - 12736136
Alignment:
Q  727 cttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatctc 804  Q
    |||||||| ||||||||||| |||||||  |||| |||||||||||||||||||| || ||||| |||| | ||||||    
T  12736059 cttacaattagttaccatttccatcttaataacatcaaacttcttcatctccttcgttcaacatgtgatgtccatctc 12736136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 726 - 803
Target Start/End: Complemental strand, 35574711 - 35574634
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatct 803  Q
    ||||||||| |||||| |||||||||||| ||||| |||| || |||||||| |||||| ||||| | |||| |||||    
T  35574711 tcttacaattagttacgattttcatcttaagaacatcaaattttttcatctcattcattcaacatgtcatctccatct 35574634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 649 - 712
Target Start/End: Original strand, 34695817 - 34695880
Alignment:
Q  649 ttttcttcatctttatttctacaatcagttaccattttcattttaagaatatcaaacttcttca 712  Q
    |||||||||||||||||  |||||||||||| ||||||| ||| || | ||||||| |||||||    
T  34695817 ttttcttcatctttattcttacaatcagttatcattttcttttcaaaattatcaaatttcttca 34695880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 630 - 719
Target Start/End: Original strand, 31475009 - 31475096
Alignment:
Q  630 ctatcagagaacaattatattttcttcatctttatttctacaatcagttaccattttcattttaagaatatcaaacttcttcatcttctt 719  Q
    |||||| |||| ||| ||||||||||| |||| |||| |  |||||||||| ||||| || | ||||| |||||||||||||||||||||    
T  31475009 ctatcaaagaaaaatcatattttcttcctctt-atttttg-aatcagttactatttttatctcaagaacatcaaacttcttcatcttctt 31475096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 736 - 797
Target Start/End: Complemental strand, 37010406 - 37010345
Alignment:
Q  736 agttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatct 797  Q
    ||||||||||||||||| |  |||| ||||||| ||||| || |||||||||||| ||||||    
T  37010406 agttaccattttcatctcaaaaacatcaaacttattcatttctttcatttaacatgtgatct 37010345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 763 - 804
Target Start/End: Original strand, 40700887 - 40700928
Alignment:
Q  763 aaacttcttcatctccttcatttaacatatgatcttcatctc 804  Q
    |||||| ||||| |||||||||||||||| ||||||||||||    
T  40700887 aaactttttcatatccttcatttaacatacgatcttcatctc 40700928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 729 - 795
Target Start/End: Original strand, 32047181 - 32047247
Alignment:
Q  729 tacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgat 795  Q
    |||| ||| ||||||||||||||| | ||||| |||||||||||||||| |||||| ||||||||||    
T  32047181 tacattcatttaccattttcatctcaagaacatcaaacttcttcatctcattcattcaacatatgat 32047247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000002; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 726 - 790
Target Start/End: Original strand, 39341203 - 39341267
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacat 790  Q
    |||||| || ||||||||||||||||||| ||| | ||||||| ||||||||||||||| |||||    
T  39341203 tcttactatgagttaccattttcatcttaagaatatcaaactttttcatctccttcattcaacat 39341267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 726 - 789
Target Start/End: Original strand, 54437810 - 54437873
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaaca 789  Q
    |||||||||||||||||||||| |||| |  |||| ||||||||||||||| | ||||||||||    
T  54437810 tcttacaatcagttaccattttaatctcaaaaacatcaaacttcttcatcttcctcatttaaca 54437873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 728 - 804
Target Start/End: Complemental strand, 20519365 - 20519289
Alignment:
Q  728 ttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatctc 804  Q
    |||||||| || ||||||||||||| | ||||  |||| ||||||||||| |||||| ||||| |||||| ||||||    
T  20519365 ttacaatccgtaaccattttcatctcaagaacgtcaaatttcttcatctctttcattaaacatgtgatctccatctc 20519289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 675 - 715
Target Start/End: Original strand, 39341213 - 39341253
Alignment:
Q  675 agttaccattttcattttaagaatatcaaacttcttcatct 715  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  39341213 agttaccattttcatcttaagaatatcaaactttttcatct 39341253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 738 - 804
Target Start/End: Original strand, 54437653 - 54437719
Alignment:
Q  738 ttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatctc 804  Q
    ||||||||||||||| |  ||||  |||||||||||| ||||||||||||||| | | |||||||||    
T  54437653 ttaccattttcatctcaataacattaaacttcttcatatccttcatttaacatgtaaacttcatctc 54437719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 668 - 717
Target Start/End: Original strand, 54437813 - 54437862
Alignment:
Q  668 tacaatcagttaccattttcattttaagaatatcaaacttcttcatcttc 717  Q
    ||||||||||||||||||| || | || || |||||||||||||||||||    
T  54437813 tacaatcagttaccattttaatctcaaaaacatcaaacttcttcatcttc 54437862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000008; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 726 - 797
Target Start/End: Complemental strand, 15131646 - 15131575
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatct 797  Q
    |||||| ||||||||||||||| |||| | ||||| |||| |||||||||||||||||| | ||| ||||||    
T  15131646 tcttactatcagttaccatttttatctcaagaacatcaaatttcttcatctccttcattcagcatgtgatct 15131575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 648 - 719
Target Start/End: Complemental strand, 20512915 - 20512844
Alignment:
Q  648 attttcttcatctttatttctacaatcagttaccattttcattttaagaatatcaaacttcttcatcttctt 719  Q
    ||||||||||||||||||| || ||||| ||  ||||||||| |||  || |||||||||||||||||||||    
T  20512915 attttcttcatctttatttttaaaatcaattgtcattttcatcttataaacatcaaacttcttcatcttctt 20512844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 726 - 805
Target Start/End: Original strand, 22050856 - 22050935
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatctca 805  Q
    ||||||||| ||||| |||||| ||||||  ||||  ||  |||||||||||||||||| ||||| ||||||||||||||    
T  22050856 tcttacaattagttatcatttttatcttaaaaacaataagtttcttcatctccttcattcaacatgtgatcttcatctca 22050935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 668 - 719
Target Start/End: Original strand, 25062497 - 25062548
Alignment:
Q  668 tacaatcagttaccattttcattttaagaatatcaaacttcttcatcttctt 719  Q
    |||||||| ||||| ||||||| | |||||||||||||||||||||||||||    
T  25062497 tacaatcaattaccgttttcatctcaagaatatcaaacttcttcatcttctt 25062548  T

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Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 804
Target Start/End: Original strand, 25062340 - 25062401
Alignment:
Q  743 attttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgatcttcatctc 804  Q
    ||||| |||||  ||||| ||||||||||||||| ||||||| ||||| |||||||||||||    
T  25062340 atttttatcttcagaacatcaaacttcttcatctgcttcattaaacatgtgatcttcatctc 25062401  T

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Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 742 - 790
Target Start/End: Complemental strand, 20512882 - 20512834
Alignment:
Q  742 cattttcatcttaggaacaccaaacttcttcatctccttcatttaacat 790  Q
    |||||||||||||  |||| ||||||||||||||| |||||||||||||    
T  20512882 cattttcatcttataaacatcaaacttcttcatcttcttcatttaacat 20512834  T

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Target: scaffold0047 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 726 - 795
Target Start/End: Complemental strand, 62798 - 62729
Alignment:
Q  726 tcttacaatcagttaccattttcatcttaggaacaccaaacttcttcatctccttcatttaacatatgat 795  Q
    ||||| ||||||||| || ||||||||||  |||| |||||||||| ||||||||||| ||| |||||||    
T  62798 tcttagaatcagttatcaatttcatcttaaaaacatcaaacttctttatctccttcatataagatatgat 62729  T

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Target: scaffold1743 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1743
Description:

Target: scaffold1743; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 648 - 715
Target Start/End: Original strand, 771 - 837
Alignment:
Q  648 attttcttcatctttatttctacaatcagttaccattttcattttaagaatatcaaacttcttcatct 715  Q
    ||||||||||| ||||||| |||| ||| ||| ||||||| ||| ||| |||||||||||||||||||    
T  771 attttcttcatttttatttttaca-tcatttatcattttcctttcaagtatatcaaacttcttcatct 837  T

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Target: scaffold0564 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 649 - 719
Target Start/End: Complemental strand, 5522 - 5452
Alignment:
Q  649 ttttcttcatctttatttctacaatcagttaccattttcattttaagaatatcaaacttcttcatcttctt 719  Q
    ||||||||||||||||   || |||||| ||| |||||||| | || || |||||||||||||||||||||    
T  5522 ttttcttcatctttatccttaaaatcaggtacaattttcatctcaaaaagatcaaacttcttcatcttctt 5452  T

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