View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17661_low_38 (Length: 282)
Name: NF17661_low_38
Description: NF17661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17661_low_38 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 130 - 282
Target Start/End: Complemental strand, 8350673 - 8350521
Alignment:
| Q |
130 |
aatacccattgccccatctccattgtttccttcgcctacaccataaccttcaccatgtcctgaacccccaccagcaccaccttttccaacacatctccaa |
229 |
Q |
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| T |
8350673 |
aatacccattgccccatctccattgtttccttcgcctgcaccataaccttcaccatgtcttgaacccccaacagcaccaccttttccaccacatctccaa |
8350574 |
T |
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| Q |
230 |
cttctatataaacaataatcatcatcattatcatcaccagacttccaacgatt |
282 |
Q |
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| T |
8350573 |
cttctatataaacaataatcatcatcattatcatcaccagacctccaacgatt |
8350521 |
T |
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