View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17661_low_48 (Length: 246)
Name: NF17661_low_48
Description: NF17661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17661_low_48 |
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Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 5 - 228
Target Start/End: Original strand, 8623271 - 8623494
Alignment:
| Q |
5 |
ggtagattatactcaatggccagtccaaaactaagttccattgggtgcaagtttgattagacttgctcaaactcatattacagaattcaaagttttttgt |
104 |
Q |
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| T |
8623271 |
ggtaaattatattcaatggccagtccaaaactaagttccattgggtgcacgtttgattagacttgctcaaactcatattacagaattcaaagttttttgt |
8623370 |
T |
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| Q |
105 |
tcttttcttttcttgcatacaattaaacaaaaaccatttgaagtatatataatcgtgtggttggcggtcaatgaatgatatattcacacacatatggtta |
204 |
Q |
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| T |
8623371 |
tcctttcttttcttgcatacaattaaacaaaaaccatttgaagtatatataatcgtgtggttggcggtcaatgaacgatatattcacacacatatggtta |
8623470 |
T |
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| Q |
205 |
gttggtaaaattctgtcactatgt |
228 |
Q |
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|||||||||||||||||||||||| |
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| T |
8623471 |
gttggtaaaattctgtcactatgt |
8623494 |
T |
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