View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17661_low_57 (Length: 225)
Name: NF17661_low_57
Description: NF17661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17661_low_57 |
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Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 16 - 212
Target Start/End: Complemental strand, 6719559 - 6719362
Alignment:
| Q |
16 |
cacttcccttggtaccatgtaatatatttagcattactactaagtagtatctttcggatctcaattagtagtaggttgattaagaggttatatagaatga |
115 |
Q |
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| T |
6719559 |
cacttcccttggtaccatgtaatatatttagcattactactaagtagtatctttcggatctcaattagtagtaggttgattaagaggttatatagaatga |
6719460 |
T |
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| Q |
116 |
ctcttttgtagcatcacctagttattatgtagataggctaccttgtgacttgatcttcatggaag-ttttaaggcttcctttagcttttgagtataat |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |
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| T |
6719459 |
ctcttttgtagcatcacctagttattatgtagataggctaccttgtgacttgatcttcatggaagtttttaaggcttcctttagcttttgattataat |
6719362 |
T |
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