View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17661_low_59 (Length: 224)
Name: NF17661_low_59
Description: NF17661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17661_low_59 |
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Alignment Details
Target: chr2 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 28 - 205
Target Start/End: Complemental strand, 8350530 - 8350353
Alignment:
| Q |
28 |
tccaacgattaggatcaacaaaactaccacctatattcctcccatgacaaataccattcataaaagcacaaagagtactaaacacaagtaatattaaagg |
127 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| | |
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| T |
8350530 |
tccaacgattaggatcaacaaaactaccacctatattcctcccatgacaaataccattcataaaaacacaaagagtactaaacacaagcaatgctaagtg |
8350431 |
T |
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| Q |
128 |
caaatactttgcattagcagcagtactagcacccatactgattttagacaacttactttgcttgacgttcttggttgt |
205 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
8350430 |
gaaatactttgcattagcagcagtactagcacccataatgattttagacaacttactttgcttgacgttcttggttgt |
8350353 |
T |
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