View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17662_high_13 (Length: 250)
Name: NF17662_high_13
Description: NF17662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17662_high_13 |
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Alignment Details
Target: chr4 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 15 - 184
Target Start/End: Complemental strand, 51287309 - 51287139
Alignment:
| Q |
15 |
tattatatttcaacaaccatacccattttaacaaccataactatagcatgttcgtaaagttataactatattatttttt-agaataaagacnnnnnnnta |
113 |
Q |
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| T |
51287309 |
tattatatttcaacaaccatacccattttaacaaccataactatagcatgttcataaagtcataactatattatttttttagaataaagacaaaaaaata |
51287210 |
T |
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| Q |
114 |
taaaaagaaacaaggaaggttcgttttcatatttacttaccctcaatttcatttcacattcatctatctcc |
184 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51287209 |
taaaaagaaacaaggaaggttcgttttcatatttacttaccctcaatttcatttcacattcatctatctcc |
51287139 |
T |
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