View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17662_low_10 (Length: 353)

Name: NF17662_low_10
Description: NF17662
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17662_low_10
NF17662_low_10
[»] chr1 (20 HSPs)
chr1 (150-342)||(41524634-41524836)
chr1 (21-148)||(41524465-41524593)
chr1 (154-241)||(4974852-4974942)
chr1 (146-252)||(49113150-49113259)
chr1 (146-224)||(29386364-29386444)
chr1 (146-241)||(1102862-1102960)
chr1 (146-222)||(4965066-4965144)
chr1 (146-241)||(20491999-20492097)
chr1 (172-253)||(18088026-18088108)
chr1 (151-241)||(49588026-49588119)
chr1 (146-210)||(41810959-41811024)
chr1 (146-226)||(47824483-47824564)
chr1 (146-222)||(1695727-1695805)
chr1 (223-261)||(48074408-48074446)
chr1 (229-265)||(15615399-15615435)
chr1 (146-223)||(20491722-20491801)
chr1 (146-223)||(29987223-29987302)
chr1 (229-265)||(29987338-29987374)
chr1 (146-223)||(41810747-41810826)
chr1 (229-265)||(42371713-42371749)
[»] chr2 (24 HSPs)
chr2 (146-253)||(11973939-11974049)
chr2 (146-241)||(28182385-28182483)
chr2 (146-240)||(5482891-5482988)
chr2 (146-223)||(30512970-30513049)
chr2 (146-223)||(43671202-43671281)
chr2 (146-241)||(5247934-5248032)
chr2 (146-241)||(34334549-34334647)
chr2 (146-223)||(1038891-1038970)
chr2 (146-223)||(1844510-1844589)
chr2 (229-265)||(40343577-40343613)
chr2 (146-241)||(4603736-4603834)
chr2 (146-222)||(30851081-30851159)
chr2 (146-241)||(45638320-45638418)
chr2 (223-265)||(5483000-5483042)
chr2 (223-265)||(7881685-7881727)
chr2 (146-223)||(28182145-28182223)
chr2 (223-265)||(42553634-42553676)
chr2 (146-186)||(28238817-28238858)
chr2 (173-241)||(43671443-43671512)
chr2 (229-265)||(5248107-5248143)
chr2 (229-265)||(28238709-28238745)
chr2 (229-265)||(28582516-28582552)
chr2 (229-265)||(30513085-30513121)
chr2 (229-257)||(44436602-44436630)
[»] chr8 (24 HSPs)
chr8 (146-241)||(24043750-24043848)
chr8 (146-223)||(29218363-29218442)
chr8 (146-241)||(15315359-15315457)
chr8 (146-241)||(15495728-15495826)
chr8 (146-241)||(35435570-35435668)
chr8 (146-241)||(31827141-31827238)
chr8 (146-223)||(44318487-44318566)
chr8 (223-266)||(15891699-15891742)
chr8 (223-265)||(15891778-15891820)
chr8 (150-240)||(24469457-24469550)
chr8 (146-241)||(1691847-1691944)
chr8 (146-223)||(4157596-4157675)
chr8 (146-241)||(9117521-9117619)
chr8 (146-241)||(15891590-15891688)
chr8 (223-266)||(22444880-22444923)
chr8 (146-241)||(44728128-44728226)
chr8 (146-223)||(22780079-22780156)
chr8 (232-265)||(22780218-22780251)
chr8 (229-265)||(1043712-1043748)
chr8 (146-234)||(9779132-9779223)
chr8 (229-265)||(24043865-24043901)
chr8 (229-265)||(27702460-27702496)
chr8 (146-223)||(27702605-27702684)
chr8 (229-261)||(44318419-44318451)
[»] chr5 (17 HSPs)
chr5 (146-265)||(29440254-29440376)
chr5 (154-253)||(40807929-40808031)
chr5 (146-240)||(2796733-2796830)
chr5 (146-240)||(2802894-2802991)
chr5 (146-223)||(42092232-42092311)
chr5 (146-241)||(6641814-6641912)
chr5 (146-241)||(39804954-39805052)
chr5 (146-224)||(21250606-21250686)
chr5 (146-260)||(1069128-1069244)
chr5 (146-223)||(27319021-27319100)
chr5 (146-198)||(26006381-26006434)
chr5 (146-222)||(5361502-5361580)
chr5 (146-190)||(18008500-18008546)
chr5 (146-241)||(27495900-27495998)
chr5 (146-241)||(42375438-42375536)
chr5 (229-265)||(2803051-2803087)
chr5 (229-265)||(28574668-28574704)
[»] chr4 (24 HSPs)
chr4 (146-261)||(7632841-7632959)
chr4 (173-265)||(7633000-7633093)
chr4 (146-222)||(3253465-3253543)
chr4 (146-241)||(14336885-14336983)
chr4 (146-252)||(40289672-40289781)
chr4 (146-223)||(32557334-32557411)
chr4 (146-241)||(15631631-15631729)
chr4 (146-241)||(25363545-25363645)
chr4 (146-241)||(32751336-32751434)
chr4 (146-221)||(21956042-21956119)
chr4 (150-223)||(32751131-32751206)
chr4 (146-222)||(13846615-13846693)
chr4 (146-241)||(34979499-34979597)
chr4 (148-223)||(18598212-18598289)
chr4 (223-261)||(25363556-25363594)
chr4 (146-221)||(53856488-53856565)
chr4 (146-224)||(13858881-13858960)
chr4 (173-221)||(5243992-5244040)
chr4 (146-223)||(15631342-15631421)
chr4 (146-223)||(21956373-21956452)
chr4 (229-261)||(25154599-25154631)
chr4 (229-261)||(40998241-40998273)
chr4 (146-223)||(41511287-41511366)
chr4 (229-265)||(55358480-55358516)
[»] chr7 (24 HSPs)
chr7 (146-257)||(8919705-8919819)
chr7 (146-241)||(3173242-3173340)
chr7 (146-241)||(18942556-18942654)
chr7 (150-241)||(44449021-44449115)
chr7 (146-253)||(47332355-47332464)
chr7 (146-262)||(41718031-41718150)
chr7 (146-241)||(6723455-6723553)
chr7 (146-253)||(30648423-30648533)
chr7 (146-241)||(39304990-39305088)
chr7 (146-241)||(42430618-42430716)
chr7 (146-241)||(10096966-10097063)
chr7 (146-223)||(9907494-9907573)
chr7 (146-223)||(18942315-18942394)
chr7 (229-265)||(22642048-22642084)
chr7 (229-265)||(45203775-45203811)
chr7 (146-241)||(44941017-44941115)
chr7 (146-241)||(46855257-46855355)
chr7 (146-241)||(48840237-48840335)
chr7 (223-265)||(3173351-3173393)
chr7 (223-265)||(44941205-44941247)
chr7 (229-265)||(6723298-6723334)
chr7 (229-265)||(9907680-9907716)
chr7 (229-265)||(42759016-42759052)
chr7 (146-223)||(45443194-45443273)
[»] scaffold0179 (1 HSPs)
scaffold0179 (149-253)||(32397-32502)
[»] chr3 (15 HSPs)
chr3 (154-241)||(11871624-11871714)
chr3 (146-222)||(48381914-48381991)
chr3 (146-253)||(25147141-25147251)
chr3 (146-241)||(50293820-50293918)
chr3 (146-223)||(47220492-47220571)
chr3 (146-223)||(48517931-48518010)
chr3 (146-222)||(13657914-13657992)
chr3 (146-241)||(26997456-26997554)
chr3 (223-265)||(3750876-3750918)
chr3 (223-257)||(43389942-43389976)
chr3 (229-266)||(17579999-17580036)
chr3 (150-224)||(45147170-45147246)
chr3 (146-191)||(8112546-8112593)
chr3 (149-241)||(29777266-29777361)
chr3 (146-223)||(43122869-43122948)
[»] scaffold0121 (2 HSPs)
scaffold0121 (146-223)||(23673-23752)
scaffold0121 (146-223)||(23933-24012)
[»] chr6 (8 HSPs)
chr6 (146-253)||(5986001-5986114)
chr6 (146-210)||(9049778-9049844)
chr6 (146-241)||(29134929-29135027)
chr6 (229-265)||(7675638-7675674)
chr6 (146-223)||(33041005-33041084)
chr6 (146-241)||(5985795-5985893)
chr6 (146-222)||(24012517-24012595)
chr6 (223-265)||(4997923-4997965)
[»] scaffold0182 (2 HSPs)
scaffold0182 (146-265)||(22216-22338)
scaffold0182 (229-257)||(23463-23491)
[»] scaffold0062 (1 HSPs)
scaffold0062 (146-241)||(11735-11833)
[»] scaffold0051 (2 HSPs)
scaffold0051 (146-241)||(60709-60807)
scaffold0051 (229-261)||(60548-60580)
[»] scaffold0016 (1 HSPs)
scaffold0016 (146-223)||(202299-202378)


Alignment Details
Target: chr1 (Bit Score: 135; Significance: 3e-70; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 150 - 342
Target Start/End: Original strand, 41524634 - 41524836
Alignment:
Q  150 tttcatgtttgtttcagatagattttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg-ataaatccttt---------aagtt 239  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||| | ||||||||||||||||||||||| |||| ||||||         || ||    
T  41524634 tttcatgtttgttttagatagattttaagtttttaaggtttcggataggtattttaaatttgaagtttgtttcggataagtccttttcgtcttataaatt 41524733  T
Q  240 tcgagtttgtttcaaatatgtcattttgtttaggattattggtgtttgttacagatctacaataacccgatcctgacaaataaatattcatacttccatt 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41524734 tcgagtttgtttcaaatatgtcattttgtttaggattattggtgtttgttacagatctacaataacccgatcctgacaaataaatattcatacttccatt 41524833  T
Q  340 cat 342  Q
    |||    
T  41524834 cat 41524836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 41524465 - 41524593
Alignment:
Q  21 gtcctcggtatcaacaaaa-aacaactcaattgatactctcaagtctcaacagacccttaaattaatctctcaaatcttttgtaagactctcacacaagt 119  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  41524465 gtcctcggtatcaaaaaaaaaacaactcaattgatactctcaagtctcaacagacccttaaattaatatctcaaatcttttgtaacactctcacacaagt 41524564  T
Q  120 aattgcctaataccttacttgcactgtaa 148  Q
    |||||||||||||||||||||||||||||    
T  41524565 aattgcctaataccttacttgcactgtaa 41524593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 4974852 - 4974942
Alignment:
Q  154 atgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||  ||||| ||| ||||||||| ||||| || ||||| ||||||||||||||| ||||  |||||||||||||    
T  4974852 atgtttgtttcagatagatcctttaagtttctaaggttttagataggtcctttaagtttgaagtttgtttcggataggtcctttaagtttc 4974942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 49113259 - 49113150
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg-ataaatcctttaagtttcg 242  Q
    |||||||||||||| ||||||||||||  ||||| ||| ||||||||  || |  || ||||| |||  ||||||||||| ||| |||||||||||||||    
T  49113259 taagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagacatgtcctttaagtttcgagtttgtttcggatagatcctttaagtttcg 49113160  T
Q  243 agtttgtttc 252  Q
    ||||||||||    
T  49113159 agtttgtttc 49113150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 29386444 - 29386364
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcga 224  Q
    |||||||||||||||||||||||||||  ||||| ||| ||| ||||  ||||| |||||||| |||| ||||||||||||    
T  29386444 taagtttcatgtttgtttcagatagatcatttaagtttctaaagtttcagataggtcttttaagtttggagtttgtttcga 29386364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 1102960 - 1102862
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||| ||||||| |||||||   ||||| ||| ||||||||  ||||| |||||||| ||||||||||||||| ||||  |||||||||||||    
T  1102960 taagtttcatatttgttttagatagaccctttaagtttctaaggtttcagataggtcttttaagtttgaagtttgtttcggataggtcctttaagtttc 1102862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 4965144 - 4965066
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc 222  Q
    |||||||||||||||||| ||||||||  ||||| ||| ||||||||  ||||| ||||||||||||  ||||||||||    
T  4965144 taagtttcatgtttgttttagatagatcatttaagtttctaaggtttcagataggtcttttaaattttgagtttgtttc 4965066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 20492097 - 20491999
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||||||  ||||| || ||||| |||  |||||||||| ||||  |||||||||||||    
T  20492097 taagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcatttaagtttcgagtttgtttcagataggtcctttaagtttc 20491999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 253
Target Start/End: Original strand, 18088026 - 18088108
Alignment:
Q  172 ttttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttcgagtttgtttca 253  Q
    |||||| ||| ||||||||  |||||||| ||||| |||  |||||||||| |||| ||||||||||||| ||||||||||||    
T  18088026 ttttaagtttctaaggtttcagatagatcctttaagttttgagtttgtttcagatagatcctttaagttttgagtttgtttca 18088108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 49588026 - 49588119
Alignment:
Q  151 ttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    ||||||||||||||||||| ||  ||||| ||||||||||||| ||||  |||||||| |||  |||||||||| ||||  |||||||||||||    
T  49588026 ttcatgtttgtttcagataaatcctttaattttttaaggttttagatatgtcttttaagtttcgagtttgtttcggataggtcctttaagtttc 49588119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 41811024 - 41810959
Alignment:
Q  146 taagtttcatgtttgtttcagatagat-tttaaatttttaaggttttggatagatcttttaaattt 210  Q
    ||||||||||||||||||||||||||| ||||| ||| ||||||||  ||||| || |||||||||    
T  41811024 taagtttcatgtttgtttcagatagatctttaagtttctaaggtttcagataggtcctttaaattt 41810959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 226
Target Start/End: Original strand, 47824483 - 47824564
Alignment:
Q  146 taagtttcatgtttgtttcagatagat-tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcgata 226  Q
    ||||||||| |||||||||||| || | ||||| ||||||||||||  ||||| || ||||| ||| |||||||||||||||    
T  47824483 taagtttcacgtttgtttcagaaaggtctttaagtttttaaggtttcagataggtcctttaagtttcaagtttgtttcgata 47824564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 1695727 - 1695805
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc 222  Q
    ||||||| |||||||||||||||||||  ||||| ||| ||||||||  ||| | || ||||| |||||||||||||||    
T  1695727 taagttttatgtttgtttcagatagatcctttaagtttctaaggtttcagattggtcctttaagtttgaagtttgtttc 1695805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 48074446 - 48074408
Alignment:
Q  223 gataaatcctttaagtttcgagtttgtttcaaatatgtc 261  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  48074446 gataagtcctttaagtttcgagtttgtttcagatatgtc 48074408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 15615435 - 15615399
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  15615435 tcctttaagtttcgagtttgtttcagataagtcattt 15615399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 20491722 - 20491801
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    ||||||||||||||||||  |||||||  ||||| ||||||||||||  ||||| || ||||| |||  |||||||||||    
T  20491722 taagtttcatgtttgttttggatagatcttttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcg 20491801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 29987223 - 29987302
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    ||||||||| ||||||||||||||| |  ||||| ||||||||||||  |||||||  ||||| |||  |||||||||||    
T  29987223 taagtttcacgtttgtttcagataggtcctttaagtttttaaggtttcagatagattctttaagtttcgagtttgtttcg 29987302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 29987338 - 29987374
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  29987338 tcctttaagtttcgagtttgtttcagataggtcattt 29987374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 41810747 - 41810826
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    ||||||||| ||||||||||||||| |  ||||| ||| ||||||||  ||||| || ||||| ||| ||||||||||||    
T  41810747 taagtttcacgtttgtttcagataggttatttaagtttctaaggtttcagataggtcctttaagttttaagtttgtttcg 41810826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 42371749 - 42371713
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    |||||||||| |||||||||||||| |||||||||||    
T  42371749 tcctttaagtgtcgagtttgtttcagatatgtcattt 42371713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 146 - 253
Target Start/End: Original strand, 11973939 - 11974049
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttcg 242  Q
    |||||||||||||||||||||||| ||  ||||| ||| ||||||||  ||||  |||||||||||||||||||||||| |||| |||||||||||||||    
T  11973939 taagtttcatgtttgtttcagataaatcctttaagtttctaaggtttcagataagtcttttaaatttgaagtttgtttcggatagatcctttaagtttcg 11974038  T
Q  243 agtttgtttca 253  Q
    |||||||||||    
T  11974039 agtttgtttca 11974049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 28182483 - 28182385
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    ||||||||| ||||||||||||||| |  ||||| ||| ||||||||| ||||| |||||||| |||| |||||||||| ||||  |||||||||||||    
T  28182483 taagtttcacgtttgtttcagataggtcctttaagtttctaaggttttagataggtcttttaagtttggagtttgtttcagatatgtcctttaagtttc 28182385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 5482891 - 5482988
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagttt 240  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||||||  ||||| | |||||| |||  |||||||||| |||| |||||||||||||    
T  5482891 taagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtgttttaagtttcgagtttgtttcggatagatcctttaagttt 5482988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 30512970 - 30513049
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    |||||||| ||||||||||||||||||  ||||| ||| ||||||||  |||||||| ||||| |||| |||||||||||    
T  30512970 taagtttcttgtttgtttcagatagattctttaagtttctaaggtttaagatagatcctttaagtttggagtttgtttcg 30513049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 43671202 - 43671281
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    ||||||||| |||||||||| |||| |  ||||||||||||||||||| |||||||| ||||| |||  |||||||||||    
T  43671202 taagtttcacgtttgtttcaaataggtcctttaaatttttaaggttttagatagatcctttaagtttcgagtttgtttcg 43671281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 5247934 - 5248032
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    ||||||| |||||||||||||||| ||  ||||| |||  |||||||  ||||| || ||||| ||||||||||||||| |||| ||||||||||||||    
T  5247934 taagttttatgtttgtttcagataaatcatttaagtttcgaaggtttcagataggtcctttaagtttgaagtttgtttcggatagatcctttaagtttc 5248032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 34334549 - 34334647
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgttt-cgataaatcctttaagtttc 241  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||||  ||||| || ||||| |||  |||||||||  ||||  |||||||||||||    
T  34334549 taagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcatttaagtttcgagtttgtttgggatatgtcctttaagtttc 34334647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 1038891 - 1038970
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    ||||||||| |||| ||||||||||||  ||||| ||||||| ||||  |||||||| ||||| |||| |||||||||||    
T  1038891 taagtttcacgtttatttcagatagatcctttaagtttttaaagtttcagatagatcctttaagtttggagtttgtttcg 1038970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 1844589 - 1844510
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    |||||||||||||| ||||||||||||  ||||| ||| ||||||||  ||| | || ||||| ||||||||||||||||    
T  1844589 taagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagatcggtcctttaagtttgaagtttgtttcg 1844510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 40343613 - 40343577
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||||||||||||||||||||||||||| |||||||    
T  40343613 tcctttaagtttcgagtttgtttcaaataagtcattt 40343577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 4603834 - 4603736
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||||||   |||| || ||||| |||  ||||||| || ||||| |||||||||||||    
T  4603834 taagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcaaataggtcatttaagtttcgagtttgtatcagataagtcctttaagtttc 4603736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 30851081 - 30851159
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc 222  Q
    |||||||||| ||||||||||||||||  ||||| ||||||| ||||  ||||| || ||||| ||| |||||||||||    
T  30851081 taagtttcatatttgtttcagatagatcctttaagtttttaacgtttcagataggtcctttaagtttcaagtttgtttc 30851159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 45638418 - 45638320
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||||||   |||| || ||||| | || |||||||||| ||||  |||||||||||||    
T  45638418 taagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcaaataggtcctttaagtatggagtttgtttcggataggtcctttaagtttc 45638320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 5483000 - 5483042
Alignment:
Q  223 gataaatcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||| ||||||||||||||||||||||||| ||| |||||||    
T  5483000 gataagtcctttaagtttcgagtttgtttcagataagtcattt 5483042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 7881685 - 7881727
Alignment:
Q  223 gataaatcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    |||| ||||||||||||||||||||||||  ||||||||||||    
T  7881685 gatagatcctttaagtttcgagtttgttttgaatatgtcattt 7881727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 28182145 - 28182223
Alignment:
Q  146 taagtttcatgtttgtttcagatagat-tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    ||||||| | |||||||||| |||| | ||||||||| ||||||||| ||||  || ||||| ||||||||||||||||    
T  28182145 taagttttacgtttgtttcaaataggtctttaaatttctaaggttttagatatgtcctttaagtttgaagtttgtttcg 28182223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 42553676 - 42553634
Alignment:
Q  223 gataaatcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    |||| |||||||||||||||||||||||||| ||| |||||||    
T  42553676 gatagatcctttaagtttcgagtttgtttcagataggtcattt 42553634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 186
Target Start/End: Complemental strand, 28238858 - 28238817
Alignment:
Q  146 taagtttcatgtttgtttcagatagat-tttaaatttttaag 186  Q
    ||||||||||||||||||||||||||| ||||| ||||||||    
T  28238858 taagtttcatgtttgtttcagatagatctttaagtttttaag 28238817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 241
Target Start/End: Complemental strand, 43671512 - 43671443
Alignment:
Q  173 tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg-ataaatcctttaagtttc 241  Q
    ||||| ||| ||||||||| ||||| || ||||| |||||||||||||||| |||  |||||||||||||    
T  43671512 tttaagtttctaaggttttagataggtcctttaagtttgaagtttgtttcgaataggtcctttaagtttc 43671443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 5248107 - 5248143
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  5248107 tcctttaagtttcgagtttgtttcagataggtcattt 5248143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 28238745 - 28238709
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  28238745 tcctttaagtttcgagtttgtttcagataggtcattt 28238709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 28582516 - 28582552
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  28582516 tcctttaagtttcgagtttgtttcagataggtcattt 28582552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 30513085 - 30513121
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  30513085 tcctttaaggttcgagtttgtttcagatatgtcattt 30513121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 257
Target Start/End: Complemental strand, 44436630 - 44436602
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaata 257  Q
    |||||||||||||||||||||||||||||    
T  44436630 tcctttaagtttcgagtttgtttcaaata 44436602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 9e-21; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 24043750 - 24043848
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||||| ||||| || ||||| ||||||||||||||| ||||  |||||||||||||    
T  24043750 taagtttcatgtttgtttcagatagatcctttaagtttttaaggttttagataggtcctttaagtttgaagtttgtttcggataggtcctttaagtttc 24043848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 29218363 - 29218442
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||||  ||||| || ||||| ||||||||||||||||    
T  29218363 taagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcctttaagtttgaagtttgtttcg 29218442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 15315457 - 15315359
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    ||||| |||||||||||||||||||||  ||||| ||||||||||||  ||||| |||||||| |||  |||||||| | ||||| |||||||||||||    
T  15315457 taagtatcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcttttaagtttcgagtttgttacggataagtcctttaagtttc 15315359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 15495826 - 15495728
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    ||||| |||||||||||||||||||||  ||||| ||||||||||||  ||||| |||||||| |||  |||||||| | ||||| |||||||||||||    
T  15495826 taagtatcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcttttaagtttcgagtttgttacggataagtcctttaagtttc 15495728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 35435668 - 35435570
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||||||| ||||| || ||||| |||  |||||||||| ||||  |||||||||||||    
T  35435668 taagtttcatgtttgtttcagatagatcctttaagtttctaaggttttagataggtcctttaagtttcgagtttgtttcggatatgtcctttaagtttc 35435570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 31827238 - 31827141
Alignment:
Q  146 taagtttcatgtttgtttcagataga--ttttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcgataaatcctttaagtttc 241  Q
    ||||||||||||||||||||||||||  |||||| ||| ||||||||  ||||| || ||||| |||  ||||||||| ||||  |||||||||||||    
T  31827238 taagtttcatgtttgtttcagatagattttttaagtttctaaggtttcagataggtcctttaagttttgagtttgtttggataggtcctttaagtttc 31827141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 44318566 - 44318487
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    ||||||||||||||| |||| ||||||  ||||| ||| ||| ||||  |||||||||||||| ||||||||||||||||    
T  44318566 taagtttcatgtttgcttcaaatagatcctttaagtttctaatgtttcagatagatcttttaagtttgaagtttgtttcg 44318487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 266
Target Start/End: Original strand, 15891699 - 15891742
Alignment:
Q  223 gataaatcctttaagtttcgagtttgtttcaaatatgtcatttt 266  Q
    |||| |||||||||||||||||||||||||| ||||||||||||    
T  15891699 gatagatcctttaagtttcgagtttgtttcagatatgtcatttt 15891742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 15891820 - 15891778
Alignment:
Q  223 gataaatcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    |||| |||||||||||||||||||||||||| |||||||||||    
T  15891820 gatagatcctttaagtttcgagtttgtttcagatatgtcattt 15891778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 24469550 - 24469457
Alignment:
Q  150 tttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagttt 240  Q
    |||||||||||||||||||||||  ||||| ||| ||||||||  ||||| || ||||| |||| |||||||||| ||||  ||||||||||||    
T  24469550 tttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttggagtttgtttcggataggtcctttaagttt 24469457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 1691847 - 1691944
Alignment:
Q  146 taagtttcatgtttgtttcagatagat-tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg-ataaatcctttaagtttc 241  Q
    ||||||| || |||||||| ||||||| ||||| ||| |||||||| ||||||||| ||||| |||  ||||| ||| | ||||||||||||||||||    
T  1691847 taagttttatctttgtttcggatagatctttaagtttctaaggtttcggatagatcctttaagtttcgagtttattttggataaatcctttaagtttc 1691944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 4157596 - 4157675
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    |||||||||||||| ||||||||||||  ||||| ||| ||||||||  ||||| || ||||| |||| |||||||||||    
T  4157596 taagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttggagtttgtttcg 4157675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 9117521 - 9117619
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttg-tttcgataaatcctttaagtttc 241  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||||||  ||||| || ||||| |||  |||||| ||| ||||  |||||||||||||    
T  9117521 taagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgttttggataggtcctttaagtttc 9117619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 15891590 - 15891688
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||| ||||||||||||||||  || || ||| ||||||||  || || || ||||| ||||||||||||||| ||||  |||||||||||||    
T  15891590 taagtttcatatttgtttcagatagatccttaaagtttctaaggtttcagacaggtcctttaagtttgaagtttgtttcagataggtcctttaagtttc 15891688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 22444923 - 22444880
Alignment:
Q  223 gataaatcctttaagtttcgagtttgtttcaaatatgtcatttt 266  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||    
T  22444923 gataagtcctttaagtttcgagtttgtttcagatatgtcctttt 22444880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 44728128 - 44728226
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||||||  || || || ||||| ||| |||||| |||| ||||  |||||||||||||    
T  44728128 taagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagacaggtcctttaagtttcaagtttatttcggataggtcctttaagtttc 44728226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 22780079 - 22780156
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||||||  ||||| ||  |||| |||| |||||||||||    
T  22780079 taagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtc--ttaagtttggagtttgtttcg 22780156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 265
Target Start/End: Complemental strand, 22780251 - 22780218
Alignment:
Q  232 tttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    |||||||||||||||||||||||||| |||||||    
T  22780251 tttaagtttcgagtttgtttcaaataggtcattt 22780218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 1043712 - 1043748
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    |||||||||||| |||||||||||| |||||||||||    
T  1043712 tcctttaagtttggagtttgtttcagatatgtcattt 1043748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 234
Target Start/End: Complemental strand, 9779223 - 9779132
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatccttt 234  Q
    |||||||||||||||||| |||||| |  ||||| ||||||||||||  ||||| || ||||| |||  |||||||||| |||| |||||||    
T  9779223 taagtttcatgtttgttttagataggtcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcagatagatccttt 9779132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 24043865 - 24043901
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  24043865 tcctttaagtttcgagtttgtttcagataggtcattt 24043901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 27702460 - 27702496
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||||||||||||||||||||| | |||||||||||    
T  27702460 tcctttaagtttcgagtttgtttaagatatgtcattt 27702496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 27702684 - 27702605
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    ||||||||||||||||||||||||| |  ||||| ||| ||||||||  ||||| || ||||| |||  |||||||||||    
T  27702684 taagtttcatgtttgtttcagatagctcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcg 27702605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 261
Target Start/End: Complemental strand, 44318451 - 44318419
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtc 261  Q
    ||||||||||||||||||||||||| |||||||    
T  44318451 tcctttaagtttcgagtttgtttcagatatgtc 44318419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 9e-21; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 29440376 - 29440254
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg-ataaatcctttaagtttcg 242  Q
    |||||||||| ||||||| ||||||||  ||||| ||||||||||||  ||||  | |||||| |||| ||||||||||| |||| ||||||||||||||    
T  29440376 taagtttcatatttgttttagatagatcctttaagtttttaaggtttcagatatgttttttaagtttggagtttgtttcggataagtcctttaagtttcg 29440277  T
Q  243 agtttgtttcaaatatgtcattt 265  Q
    ||||||||||| ||| |||||||    
T  29440276 agtttgtttcatataggtcattt 29440254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 40808031 - 40807929
Alignment:
Q  154 atgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg-ataaatcctttaagtttcgagtttgtt 250  Q
    |||||| ||||||||||||  ||||| ||| ||||||||  ||||| || ||||| |||||||||||||||| |||  ||||||||||||||||||||||    
T  40808031 atgtttatttcagatagatcctttaactttctaaggtttcagataggtcctttaagtttgaagtttgtttcggataggtcctttaagtttcgagtttgtt 40807932  T
Q  251 tca 253  Q
    |||    
T  40807931 tca 40807929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 2796733 - 2796830
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagttt 240  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||||||| ||||| || ||||| |||| |||||||||| ||||  ||||||||||||    
T  2796733 taagtttcatgtttgtttcagatagatcctttaagtttctaaggttttagataggtcctttaagtttggagtttgtttcggatatgtcctttaagttt 2796830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 240
Target Start/End: Original strand, 2802894 - 2802991
Alignment:
Q  146 taagtttcatgtttgtttcagataga--ttttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagttt 240  Q
    ||||||||||||||||||||||||||  |||||| ||| ||||||||| ||||| || ||||| |||| |||||||||| ||||  ||||||||||||    
T  2802894 taagtttcatgtttgtttcagatagatcttttaagtttctaaggttttagataggtcctttaagtttggagtttgtttcggataggtcctttaagttt 2802991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 42092311 - 42092232
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    |||||||||||||||||| ||||||||  ||||| ||| ||||||||  ||||| |||||||| ||||||||||||||||    
T  42092311 taagtttcatgtttgttttagatagatcctttaagtttctaaggtttcagataggtcttttaagtttgaagtttgtttcg 42092232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 6641814 - 6641912
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||||||||||  ||||| ||| |||| |||  ||||| || ||||| ||||||||||||||| |||| | ||||||||||||    
T  6641814 taagtttcatgtttgtttcagatagatcctttaagtttctaagatttcagataggtcctttaagtttgaagtttgtttcggatagaccctttaagtttc 6641912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 39804954 - 39805052
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||||||  ||| | || ||||| ||||||||||||||| ||||  |||||||||||||    
T  39804954 taagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagatgggtcctttaagtttgaagtttgtttcggataggtcctttaagtttc 39805052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 21250686 - 21250606
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcga 224  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||||||| ||||| || ||||| |||  ||||||||||||    
T  21250686 taagtttcatgtttgtttcagatagatcctttaagtttctaaggttttagataggtcatttaagtttcgagtttgtttcga 21250606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 260
Target Start/End: Original strand, 1069128 - 1069244
Alignment:
Q  146 taagtttcatgtttgtttcagatagat-tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttcga 243  Q
    ||||||||  ||||||||| ||||| | ||||| ||| ||||||||  ||||| || ||||| ||| ||||||||||| ||||  ||||||||||||| |    
T  1069128 taagtttcgagtttgtttcggataggtctttaagtttataaggtttcagataggtcctttaagtttcaagtttgtttcagataggtcctttaagtttcaa 1069227  T
Q  244 gtttgtttcaaatatgt 260  Q
    |||||||||| ||||||    
T  1069228 gtttgtttcagatatgt 1069244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 27319100 - 27319021
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    ||||||| |||||||||||||||||||  ||||||||| ||||||||  ||||  || ||||| ||||||||||||||||    
T  27319100 taagttttatgtttgtttcagatagatcctttaaatttctaaggtttcagataagtcctttaagtttgaagtttgtttcg 27319021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 26006434 - 26006381
Alignment:
Q  146 taagtttcatgtttgtttcagataga-ttttaaatttttaaggttttggataga 198  Q
    |||||||||||||||||||||||||| |||||| ||| ||||||||| ||||||    
T  26006434 taagtttcatgtttgtttcagatagatttttaagtttctaaggttttagataga 26006381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 5361580 - 5361502
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc 222  Q
    |||||| ||||||||||||||||||||  ||||| ||| ||||||||  |||||||  |||||||||  ||||||||||    
T  5361580 taagttgcatgtttgtttcagatagatcatttaagtttctaaggtttcagatagattctttaaatttcgagtttgtttc 5361502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 18008546 - 18008500
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttt 190  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||||    
T  18008546 taagtttcatgtttgtttcagatagatcctttaagtttttaaggttt 18008500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 27495900 - 27495998
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg-ataaatcctttaagtttc 241  Q
    ||||||||| ||||||||||||||| |  ||||| ||| ||||||||   |||| || ||||| |||||| ||||||||| ||| ||||||||||||||    
T  27495900 taagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcaaataggtcctttaagtttgaaatttgtttcgaatagatcctttaagtttc 27495998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 42375438 - 42375536
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg-ataaatcctttaagtttc 241  Q
    |||||||||||||||||| ||||| ||  ||||||||||||||||||  ||||||||  |||| |||   |||||||||| |||  |||||||||||||    
T  42375438 taagtttcatgtttgtttaagatatatcctttaaatttttaaggtttcagatagatcccttaagtttcgtgtttgtttcgcataggtcctttaagtttc 42375536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 2803087 - 2803051
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  2803087 tcctttaagtttcgagtttgtttcagataggtcattt 2803051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 28574704 - 28574668
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  28574704 tcctttaagtttcgagtttgtttcagataggtcattt 28574668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 9e-21; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 7632841 - 7632959
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg-ataaatcctttaagtttcg 242  Q
    |||||||||||||| ||||||||||||  ||||| ||| ||||||||  ||||  || ||||| |||||||||||||||| |||  ||||||||||||||    
T  7632841 taagtttcatgtttatttcagatagatcctttaagtttctaaggtttcagataagtcctttaagtttgaagtttgtttcggataggtcctttaagtttcg 7632940  T
Q  243 agtttgtttcaaatatgtc 261  Q
    ||||||||||| |||||||    
T  7632941 agtttgtttcagatatgtc 7632959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 265
Target Start/End: Complemental strand, 7633093 - 7633000
Alignment:
Q  173 tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg-ataaatcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||| ||| ||||||||| ||||| || ||||| ||| |||||||||||| |||  ||||||||||||||||||||||||| ||| |||||||    
T  7633093 tttaagtttctaaggttttagataggtcctttaagtttcaagtttgtttcggataggtcctttaagtttcgagtttgtttcagataggtcattt 7633000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 3253543 - 3253465
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc 222  Q
    ||||||||||||||||||||| |||||  ||||||||| ||| ||||  |||||||| |||||||||| ||||||||||    
T  3253543 taagtttcatgtttgtttcagttagatcctttaaatttctaatgtttcagatagatcctttaaatttggagtttgtttc 3253465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 14336983 - 14336885
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||||||  ||| | || ||||| ||||||||||||||| ||||  |||||||||||||    
T  14336983 taagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagatgggtcctttaagtttgaagtttgtttcggataggtcctttaagtttc 14336885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 252
Target Start/End: Complemental strand, 40289781 - 40289672
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttcg 242  Q
    |||||||||||||||||||||||||||  ||||| ||| |||| ||| |||||| || ||||| |||  |||||||||| ||||  || ||||||||| |    
T  40289781 taagtttcatgtttgtttcagatagatcctttaagtttctaagatttcggataggtcctttaagttttgagtttgtttcggataggtcatttaagttttg 40289682  T
Q  243 agtttgtttc 252  Q
    ||||||||||    
T  40289681 agtttgtttc 40289672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 32557411 - 32557334
Alignment:
Q  146 taagtttcatgtttgtttcagatagattttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    |||||||||||||||||||||||||  ||||| ||| ||||||||| ||||| || ||||| |||  |||||||||||    
T  32557411 taagtttcatgtttgtttcagatagcatttaagtttataaggttttagataggtcctttaagttttgagtttgtttcg 32557334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 15631729 - 15631631
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||| ||||||  ||||| ||||||||||||  ||||| || ||||| |||  |||||||||| ||||  |||||||||||||    
T  15631729 taagtttcatgtttgtttcacatagatcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcggataggtcctttaagtttc 15631631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 25363645 - 25363545
Alignment:
Q  146 taagtttcatgtttgtttcagatagat----tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg-ataaatcctttaagttt 240  Q
    |||||||||||||||||||||||||||    ||||| ||| ||||||||  |||||||| ||||| |||  ||||||||||| |||  ||||||||||||    
T  25363645 taagtttcatgtttgtttcagatagatctcctttaagtttctaaggtttcagatagatcctttaagtttcgagtttgtttcgaatatgtcctttaagttt 25363546  T
Q  241 c 241  Q
    |    
T  25363545 c 25363545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 32751434 - 32751336
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    ||||||| ||||||||||||||||| |  ||||| ||| ||||||||| ||||| || ||||| ||| ||||||||||| ||||  |||||||||||||    
T  32751434 taagttttatgtttgtttcagataggtcttttaagtttctaaggttttagatagctcctttaagtttaaagtttgtttcagataggtcctttaagtttc 32751336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 21956042 - 21956119
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgttt 221  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||||||  ||||| || |||||||||  |||||||||    
T  21956042 taagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaaatttcgagtttgttt 21956119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 32751131 - 32751206
Alignment:
Q  150 tttcatgtttgtttcagatagatt--ttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    |||||||||||||| |||||||||  |||| ||| ||||||||  ||||| || ||||| ||||||||||||||||    
T  32751131 tttcatgtttgtttaagatagattctttaagtttctaaggtttcagataggtcatttaagtttgaagtttgtttcg 32751206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 13846615 - 13846693
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc 222  Q
    |||| ||||||||||||||||||||||  ||||| ||| ||||||||  ||||| |||||||| |||  ||||||||||    
T  13846615 taaggttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcttttaagtttcgagtttgtttc 13846693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 34979499 - 34979597
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg-ataaatcctttaagtttc 241  Q
    ||||||||| ||||||||||||||| |  ||||| ||| ||||||||  ||||| || ||||| |||  ||||||||||| |||| |||||||||||||    
T  34979499 taagtttcacgtttgtttcagataggtcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcgaataagtcctttaagtttc 34979597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 18598212 - 18598289
Alignment:
Q  148 agtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    ||||||| ||||||||||||||| |  ||||| ||| ||||||||  |||||||| |||||||||  |||||||||||    
T  18598212 agtttcaagtttgtttcagataggtcctttaagtttctaaggtttcagatagatcatttaaatttcgagtttgtttcg 18598289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 25363594 - 25363556
Alignment:
Q  223 gataaatcctttaagtttcgagtttgtttcaaatatgtc 261  Q
    |||| ||||||||||||||||||||||||| ||||||||    
T  25363594 gatagatcctttaagtttcgagtttgtttcgaatatgtc 25363556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 53856488 - 53856565
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgttt 221  Q
    ||||||||||||||||||| |||| ||  ||||| ||| ||||||||  ||||  |||||||| ||||||||||||||    
T  53856488 taagtttcatgtttgtttcggataaatcttttaagtttctaaggtttcagatatgtcttttaagtttgaagtttgttt 53856565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 13858881 - 13858960
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcga 224  Q
    ||||||| |||||||||| ||||||||  ||||||||||||| ||||   |||| |||||||| |||||| ||||||||||    
T  13858881 taagttttatgtttgttttagatagatcttttaaatttttaaagtttcatataggtcttttaagtttgaa-tttgtttcga 13858960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 5243992 - 5244040
Alignment:
Q  173 tttaaatttttaaggttttggatagatcttttaaatttgaagtttgttt 221  Q
    ||||||||||||| ||||| ||||| || ||||||||| ||||||||||    
T  5243992 tttaaatttttaaagttttagataggtcctttaaattttaagtttgttt 5244040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 15631342 - 15631421
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    |||||||| ||||| |||||||||| |  ||||||||| ||||||||  |||||||| ||||| |||  |||||||||||    
T  15631342 taagtttcctgtttatttcagataggtcctttaaatttctaaggtttcagatagatcctttaagtttcgagtttgtttcg 15631421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 21956452 - 21956373
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    ||||||||||||||||||| ||||| |  ||||| ||||||||||||  ||||| || ||||| |||  |||||||||||    
T  21956452 taagtttcatgtttgtttcggataggtcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcg 21956373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 261
Target Start/End: Original strand, 25154599 - 25154631
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtc 261  Q
    ||||||||||||||||||||||||| |||||||    
T  25154599 tcctttaagtttcgagtttgtttcagatatgtc 25154631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 261
Target Start/End: Original strand, 40998241 - 40998273
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtc 261  Q
    ||||||||||||||||||||||||| |||||||    
T  40998241 tcctttaagtttcgagtttgtttcagatatgtc 40998273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 41511366 - 41511287
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    ||||||| |||||| ||||||||||||  ||||| ||| ||| ||||  ||||| || ||||||||| ||||||||||||    
T  41511366 taagttttatgtttatttcagatagatcatttaagtttctaaagtttcagataggtcctttaaattttaagtttgtttcg 41511287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 55358516 - 55358480
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  55358516 tcctttaagtttcgagtttgtttcagataggtcattt 55358480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 257
Target Start/End: Complemental strand, 8919819 - 8919705
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttcg 242  Q
    |||||||||| ||| ||||||||||||  ||||| ||| ||||||||  ||||  || ||||| ||||||||||||||| |||| ||||||||||||| |    
T  8919819 taagtttcatatttatttcagatagatcttttaagtttctaaggtttcagataagtcctttaagtttgaagtttgtttcagatagatcctttaagttttg 8919720  T
Q  243 agtttgtttcaaata 257  Q
    |||||||||||||||    
T  8919719 agtttgtttcaaata 8919705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 3173242 - 3173340
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||||  ||||| || ||||| |||  |||||||||| ||||  |||||||||||||    
T  3173242 taagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcggataggtcctttaagtttc 3173340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 18942654 - 18942556
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||||||| ||  ||||| ||| ||||||||  ||||| || ||||| ||| ||||||||||| |||| ||||||||||||||    
T  18942654 taagtttcatgtttgtttcagataaatcctttaagtttataaggtttcagataggtcctttaagtttcaagtttgtttcggatagatcctttaagtttc 18942556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 241
Target Start/End: Original strand, 44449021 - 44449115
Alignment:
Q  150 tttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||||||  ||||| ||||||||||||  ||||| || ||||| |||  |||||||||| ||||| |||||||||||||    
T  44449021 tttcatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcctttaagtttcgagtttgtttcggataagtcctttaagtttc 44449115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 253
Target Start/End: Original strand, 47332355 - 47332464
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg-ataaatcctttaagtttcg 242  Q
    |||||||||||||||||| ||||||||  ||||| ||| ||||||||  ||||| || ||||| ||| |||||||||||| |||  |||||||||||| |    
T  47332355 taagtttcatgtttgttttagatagatcatttaagtttctaaggtttcagataggtc-tttaagtttaaagtttgtttcgaataggtcctttaagtttag 47332453  T
Q  243 agtttgtttca 253  Q
    |||||||||||    
T  47332454 agtttgtttca 47332464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 262
Target Start/End: Original strand, 41718031 - 41718150
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg-ataaatcctttaagtttcg 242  Q
    ||||| |||||||||||||||||||||  ||| || ||| || | ||| ||| | || ||||| |||  ||||||||||| |||  ||||||||||||||    
T  41718031 taagtatcatgtttgtttcagatagatctttttaagtttcaaaggtttagatgggtcctttaagtttcgagtttgtttcggataggtcctttaagtttcg 41718130  T
Q  243 agtttgtttcaaatatgtca 262  Q
    ||||||||||| ||||||||    
T  41718131 agtttgtttcatatatgtca 41718150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 6723553 - 6723455
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    ||||||| |||||||||||||||||||   |||| ||| ||||||||| |||||||| ||||| |||  |||||||||| ||||  |||||||||||||    
T  6723553 taagttttatgtttgtttcagatagatccgttaagtttctaaggttttagatagatcctttaagtttcgagtttgtttcggataggtcctttaagtttc 6723455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 253
Target Start/End: Complemental strand, 30648533 - 30648423
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcga-taaatcctttaagtttcg 242  Q
    |||||||||||| ||| ||||||||||  ||||| |||  |||||||  ||||  || ||||| ||| ||||||||||||| ||  ||||||||||||||    
T  30648533 taagtttcatgtgtgtgtcagatagatcctttaagtttccaaggtttcagatatgtcctttaagttttaagtttgtttcgaataggtcctttaagtttcg 30648434  T
Q  243 agtttgtttca 253  Q
    |||||||||||    
T  30648433 agtttgtttca 30648423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 39304990 - 39305088
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    ||||||||| |||||||||||||||||  ||||| ||||||||||||   ||||||| ||||| |||  |||||||||| |||| |||||||| |||||    
T  39304990 taagtttcacgtttgtttcagatagattctttaagtttttaaggtttcatatagatcctttaagtttcgagtttgtttcggatagatcctttacgtttc 39305088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 42430716 - 42430618
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||||||  ||||| || ||||| |||  |||||||||| ||||  |||||||||||||    
T  42430716 taagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttcgagtttgtttcggataggtcctttaagtttc 42430618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 10096966 - 10097063
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcgataaatcctttaagtttc 241  Q
    ||||||| |||||||||||| ||||||  ||||||||| ||||||||  ||||  || ||||| |||  ||||||||||||||  |||||||||||||    
T  10096966 taagttttatgtttgtttcaaatagatcctttaaatttctaaggtttcagataagtcctttaagttttgagtttgtttcgataggtcctttaagtttc 10097063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 9907494 - 9907573
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    ||||||| | ||||||||||||||| |  ||||| ||||||||||||| ||||| || ||||| |||| |||||||||||    
T  9907494 taagtttaacgtttgtttcagataggtcctttaagtttttaaggttttagataggtcctttaagtttggagtttgtttcg 9907573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 18942315 - 18942394
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    |||||||||||||||||||||||||||  ||||| ||| | ||||||  ||||| || |||||||||  |||||||||||    
T  18942315 taagtttcatgtttgtttcagatagatcctttaagtttctgaggtttcagataggtcctttaaatttcgagtttgtttcg 18942394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 22642084 - 22642048
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||||||||||||||||||||||| |||||||||||    
T  22642084 tcctttaagtttcgagtttgtttcagatatgtcattt 22642048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 45203811 - 45203775
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||||||||||||||||||||||| |||||||||||    
T  45203811 tcctttaagtttcgagtttgtttcagatatgtcattt 45203775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 44941017 - 44941115
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||| | ||||||  ||||| ||| ||||||||  ||||  || ||||| |||||||||| |||| |||| ||||||||||||||    
T  44941017 taagtttcatgtttgttttaaatagatcatttaagtttctaaggtttaagataagtcatttaagtttgaagtttatttcggatagatcctttaagtttc 44941115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 46855355 - 46855257
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg-ataaatcctttaagtttc 241  Q
    ||||||| |||||||||||||||||||  ||||| ||| | ||||||  ||||| || ||||| |||| ||||||||||| |||  |||||||||||||    
T  46855355 taagttttatgtttgtttcagatagatcctttaagtttatgaggtttcagataggtcctttaagtttggagtttgtttcgaataggtcctttaagtttc 46855257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 48840335 - 48840237
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||||||   |||| || ||||| |||  |||||||||| ||||  |||||||||||||    
T  48840335 taagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcaaataggtcctttaagtttcgagtttgtttcggataggtcctttaagtttc 48840237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 265
Target Start/End: Original strand, 3173351 - 3173393
Alignment:
Q  223 gataaatcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||| ||||||||||||||||||||||||| ||| |||||||    
T  3173351 gataagtcctttaagtttcgagtttgtttcagataggtcattt 3173393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 44941247 - 44941205
Alignment:
Q  223 gataaatcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||| ||||||||||||||||||||||||| |||| ||||||    
T  44941247 gataagtcctttaagtttcgagtttgtttcagatatatcattt 44941205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 6723298 - 6723334
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||||||||||||||||||||| | |||||||||||    
T  6723298 tcctttaagtttcgagtttgtttaagatatgtcattt 6723334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 9907716 - 9907680
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  9907716 tcctttaagtttcgagtttgtttcagataggtcattt 9907680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 42759016 - 42759052
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  42759016 tcctttaagtttcgagtttgtttcagataggtcattt 42759052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 45443194 - 45443273
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    |||||||||||| ||||||||||| ||  ||||| ||||||||||||  |||||||| ||||| ||   |||||||||||    
T  45443194 taagtttcatgtctgtttcagataaatcatttaagtttttaaggtttcagatagatcctttaagttccgagtttgtttcg 45443273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 253
Target Start/End: Complemental strand, 32502 - 32397
Alignment:
Q  149 gtttcatgtttgtttcagatagat-tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttcgagtt 246  Q
    |||||||||||||||||||||||| ||||| ||| ||||||||  ||||  || ||||| ||||||||||||||| ||||  | ||||||||||||||||    
T  32502 gtttcatgtttgtttcagatagatctttaagtttctaaggtttcagatatgtcatttaagtttgaagtttgtttcagataggt-ctttaagtttcgagtt 32404  T
Q  247 tgtttca 253  Q
    |||||||    
T  32403 tgtttca 32397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 241
Target Start/End: Complemental strand, 11871714 - 11871624
Alignment:
Q  154 atgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||  ||||| ||| ||||||||  ||||| || ||||| ||||||||||||||| ||||| |||||||||||||    
T  11871714 atgtttgtttcagatagatcctttaagtttataaggtttcagataggtcctttaagtttgaagtttgtttcggataactcctttaagtttc 11871624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 48381914 - 48381991
Alignment:
Q  146 taagtttcatgtttgtttcagatagatt-ttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc 222  Q
    ||||||||| |||||||||||||||||  |||| ||||||||||||| |||||||| ||||| |||  ||||||||||    
T  48381914 taagtttcacgtttgtttcagatagatccttaagtttttaaggttttagatagatcatttaagtttcgagtttgtttc 48381991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 253
Target Start/End: Original strand, 25147141 - 25147251
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttcg 242  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||||||  |||   || ||||| ||| ||||||||||| || |  ||||||||||||||    
T  25147141 taagtttcatgtttgtttcagatagatcatttaagtttctaaggtttcagatgagtcctttaagtttcaagtttgtttcggacagttcctttaagtttcg 25147240  T
Q  243 agtttgtttca 253  Q
    |||| ||||||    
T  25147241 agttagtttca 25147251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 50293918 - 50293820
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttg-tttcgataaatcctttaagtttc 241  Q
    ||||||| |||||||||||||||||||  ||||| ||||||||||||  ||||| || ||||| |||| |||||| ||| |||||  ||||||||||||    
T  50293918 taagttttatgtttgtttcagatagatcctttaagtttttaaggtttcagataggtcctttaagtttggagtttgttttggataagccctttaagtttc 50293820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 47220571 - 47220492
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    |||||||||||||||||| ||||||||  ||||| ||| ||||||||| ||||  || ||||| || |||||||||||||    
T  47220571 taagtttcatgtttgtttaagatagatcctttaagtttctaaggttttagatatgtcctttaagttggaagtttgtttcg 47220492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 48517931 - 48518010
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    |||||||||||||||||| ||||||||  ||||| ||| ||||||||| ||||| || ||||| |||  |||||||||||    
T  48517931 taagtttcatgtttgttttagatagatcctttaagtttctaaggttttagataggtcctttaagtttcgagtttgtttcg 48518010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 13657914 - 13657992
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc 222  Q
    |||||||||||||||||||||||||||  ||||| ||| ||||||||  ||||  || ||||| |||| ||||||||||    
T  13657914 taagtttcatgtttgtttcagatagatcatttaagtttctaaggtttcagataagtcctttaagtttggagtttgtttc 13657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 26997554 - 26997456
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttg-tttcgataaatcctttaagtttc 241  Q
    |||||| ||||||||||||||||||||  ||||| ||| ||||||||  ||||| || ||||| ||||| ||||| ||| ||||  |||||||||||||    
T  26997554 taagttccatgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaagtttgatgtttgttttggataggtcctttaagtttc 26997456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 3750918 - 3750876
Alignment:
Q  223 gataaatcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||| ||||||||||||||||||||||||| ||| |||||||    
T  3750918 gataagtcctttaagtttcgagtttgtttcagataggtcattt 3750876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 257
Target Start/End: Original strand, 43389942 - 43389976
Alignment:
Q  223 gataaatcctttaagtttcgagtttgtttcaaata 257  Q
    |||| ||||||||||||||||||||||||||||||    
T  43389942 gatagatcctttaagtttcgagtttgtttcaaata 43389976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 17580036 - 17579999
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcatttt 266  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  17580036 tcctttaagtttcgagtttgtttcagataggtcatttt 17579999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 45147246 - 45147170
Alignment:
Q  150 tttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcga 224  Q
    ||||| |||| |||||||||| |  ||||||||| ||||||| | ||||  |||||||||||| |||||||||||||    
T  45147246 tttcacgtttatttcagataggtcttttaaatttctaaggttatagataagtcttttaaatttcaagtttgtttcga 45147170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 8112546 - 8112593
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggtttt 191  Q
    |||||||||||||||||| ||||||||  ||||| |||||||||||||    
T  8112546 taagtttcatgtttgttttagatagatcatttaagtttttaaggtttt 8112593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 149 - 241
Target Start/End: Original strand, 29777266 - 29777361
Alignment:
Q  149 gtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||| |||||||||||||||||||  ||||| ||| ||||||||   |||| || ||||| |||| |||||||||| ||||  |||||||||||||    
T  29777266 gttttatgtttgtttcagatagatcctttaagtttctaaggtttcatataggtcctttaagtttggagtttgtttcggataggtcctttaagtttc 29777361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 43122948 - 43122869
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    |||||||||||||| ||||||||||||  ||||| ||| ||||||||  ||||  || ||||| |||| |||||||||||    
T  43122948 taagtttcatgtttttttcagatagatcgtttaagtttctaaggtttcagataagtcctttaagtttgtagtttgtttcg 43122869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 23673 - 23752
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    |||||||||||||||||| ||||||||  ||||| ||||||||||||  ||||  || ||||||||| ||||||||||||    
T  23673 taagtttcatgtttgttttagatagatcatttaagtttttaaggtttcagataagtcatttaaatttaaagtttgtttcg 23752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 24012 - 23933
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    ||||||||| |||||||||||||||||  ||||||||| ||||||||  |||||||| ||| | ||| ||||||||||||    
T  24012 taagtttcacgtttgtttcagatagatcctttaaatttctaaggtttcagatagatcctttcagtttcaagtttgtttcg 23933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 253
Target Start/End: Complemental strand, 5986114 - 5986001
Alignment:
Q  146 taagtttcatgtttgtttcagatagatt--ttaaatttttaaggttttggatagatcttttaaat---ttgaagtttgtttcg-ataaatcctttaagtt 239  Q
    |||||||||| ||| ||||||||| |||  |||| ||| ||||||||| ||||| || ||||| |   ||||||||||||||| |||| || ||||||||    
T  5986114 taagtttcatatttatttcagataaattctttaagtttctaaggttttagataggtcctttaattagtttgaagtttgtttcggataagtcatttaagtt 5986015  T
Q  240 tcgagtttgtttca 253  Q
    ||||||||||||||    
T  5986014 tcgagtttgtttca 5986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 9049844 - 9049778
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaattt 210  Q
    |||||||||||||||||||||||||||  ||||| ||| |||||||| |||||| || |||||||||    
T  9049844 taagtttcatgtttgtttcagatagatcctttaagtttctaaggtttcggataggtcctttaaattt 9049778  T

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Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 29134929 - 29135027
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||||   |||  || ||||| |||  |||||||||| |||| ||||||||||||||    
T  29134929 taagtttcatgtttgtttcagatagatcctttaagtttttaaggtttcaaatatgtcctttaagtttcgagtttgtttcggatagatcctttaagtttc 29135027  T

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Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 7675638 - 7675674
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||||||||||||||||||||| |||||||||||||    
T  7675638 tcctttaagtttcgagtttgttttaaatatgtcattt 7675674  T

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Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 33041084 - 33041005
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    ||||||||| ||||||||||||||| |  ||||| ||| ||||||||  ||||| || ||||| ||||||||||||||||    
T  33041084 taagtttcacgtttgtttcagataggtcctttaagtttgtaaggtttcagataggtcctttaagtttgaagtttgtttcg 33041005  T

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Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 5985795 - 5985893
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    ||||||||| |||||||||||||||||  ||||| ||| ||||||||  ||||  || ||||| ||| ||||||||||| ||||  |||||||||||||    
T  5985795 taagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagatatgtcctttaagttttaagtttgtttcggataggtcctttaagtttc 5985893  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 24012595 - 24012517
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc 222  Q
    ||||||||| |||||||||||||||||  ||||| ||| ||||||||  ||||| || |||||||||  ||||||||||    
T  24012595 taagtttcacgtttgtttcagatagatcctttaagtttctaaggtttcagataggtcctttaaatttcgagtttgtttc 24012517  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 265
Target Start/End: Complemental strand, 4997965 - 4997923
Alignment:
Q  223 gataaatcctttaagtttcgagtttgtttcaaatatgtcattt 265  Q
    ||||| ||||||||||||||||||||||||| ||| |||||||    
T  4997965 gataagtcctttaagtttcgagtttgtttcagataggtcattt 4997923  T

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Target: scaffold0182 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 265
Target Start/End: Original strand, 22216 - 22338
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg-ataaatcctttaagtttcg 242  Q
    |||||||||| ||||||||||||||||  ||||| ||| ||||  ||  ||||| || ||||| | || ||||||||||| |||  ||||||||||||||    
T  22216 taagtttcatatttgtttcagatagatcctttaagtttctaagtcttcagatagttcctttaagtatggagtttgtttcggataggtcctttaagtttcg 22315  T
Q  243 agtttgtttcaaatatgtcattt 265  Q
    ||||| ||||| ||| |||||||    
T  22316 agtttctttcagataagtcattt 22338  T

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Target: scaffold0182; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 257
Target Start/End: Complemental strand, 23491 - 23463
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaata 257  Q
    |||||||||||||||||||||||||||||    
T  23491 tcctttaagtttcgagtttgtttcaaata 23463  T

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Target: scaffold0062 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 241
Target Start/End: Original strand, 11735 - 11833
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    |||||||||||||||||||||||||||  ||||| |||  |||||||  ||||| || ||||| |||| |||||||||| ||||| |||||||| ||||    
T  11735 taagtttcatgtttgtttcagatagatcctttaagtttcgaaggtttcagataggtcctttaagtttggagtttgtttcggataagtcctttaaatttc 11833  T

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Target: scaffold0051 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 241
Target Start/End: Complemental strand, 60807 - 60709
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttc-gataaatcctttaagtttc 241  Q
    ||||||| || ||||||||||||||||  ||||| ||| |||||||| |||||| || ||||  |||| ||||||||||  |||| |||||||||||||    
T  60807 taagttttatatttgtttcagatagatcatttaagtttctaaggtttcggataggtcctttatgtttggagtttgtttcaaataagtcctttaagtttc 60709  T

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Target: scaffold0051; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 229 - 261
Target Start/End: Original strand, 60548 - 60580
Alignment:
Q  229 tcctttaagtttcgagtttgtttcaaatatgtc 261  Q
    |||||||||||||||||||||||| ||||||||    
T  60548 tcctttaagtttcgagtttgtttcgaatatgtc 60580  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 202299 - 202378
Alignment:
Q  146 taagtttcatgtttgtttcagatagat--tttaaatttttaaggttttggatagatcttttaaatttgaagtttgtttcg 223  Q
    |||||||||||||||||||| ||||||  ||||| ||| |||| |||  ||||| || ||||| |||| |||||||||||    
T  202299 taagtttcatgtttgtttcaaatagatcctttaagtttctaagatttcagataggtcctttaagtttggagtttgtttcg 202378  T

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