View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17664_high_18 (Length: 294)
Name: NF17664_high_18
Description: NF17664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17664_high_18 |
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Alignment Details
Target: chr5 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 16 - 276
Target Start/End: Complemental strand, 7297476 - 7297216
Alignment:
| Q |
16 |
aatactattttcttctacctaaaaaatgtagttgtccaacaccaacaaagtttgatcacatacaatccttttatgtgaggcctaatttgttgcttcaatt |
115 |
Q |
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| T |
7297476 |
aatactattttcttctacctaaaaaatgtagttgtccaacaccaacaaagtttgatcacatacaatccttttatgtgaggcctaatttgttgcttcaatt |
7297377 |
T |
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| Q |
116 |
ggacttcaatttgttagtatctgcattatttcgtgcacctaagacaagagagcaatcaccaacaatctcattcttcttctttttgccattagcccttaca |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7297376 |
ggacttcaatttgttagtatctgcattatttcgtgcacctaagacaagagagcaatcaccaacaatctcattcttcttctttttgccattagcccttaca |
7297277 |
T |
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| Q |
216 |
taaaaattaacaaacaacaacaaaataacaccattcaaaatagaattgaaaacccaagcac |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7297276 |
taaaaattaacaaacaacaacaaaataacaccattcaaaatagaattgaaaacccaagcac |
7297216 |
T |
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