View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17664_low_24 (Length: 246)
Name: NF17664_low_24
Description: NF17664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17664_low_24 |
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Alignment Details
Target: chr5 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 7297453 - 7297687
Alignment:
| Q |
1 |
ttttaggtagaagaaaatagtattgtttagcaggttttgtttttgttggagggttgccgtgtagcactaaattggtttagctacatattgtgcatcttta |
100 |
Q |
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| T |
7297453 |
ttttaggtagaagaaaatagtattgtttagcaggttttgtttttgttggagggttgccgtgtagcactaaattggtttagctacatattgtgcatcttta |
7297552 |
T |
|
| Q |
101 |
tttgaatgatggcagtttgttgtattctcttaagctgtacttctgtttagaacttaaatgtgtaccatacaacatgtgtacttctcagatttaacgaata |
200 |
Q |
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| T |
7297553 |
tttgaatgatggcagtttgttgtattctcttaagctgtacttctgtttagaacttaaatgtgtaccatacaacatgtgtacttctcagatttaacgaata |
7297652 |
T |
|
| Q |
201 |
ttgtttaaattcaaatgataaatgcaccgatagta |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
7297653 |
ttgtttaaattcaaatgataaatgcaccgatagta |
7297687 |
T |
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