View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17668_high_47 (Length: 268)
Name: NF17668_high_47
Description: NF17668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17668_high_47 |
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Alignment Details
Target: chr8 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 39641498 - 39641737
Alignment:
| Q |
13 |
cacagacaaatgagcaatcagaggccttagaaaaggttttagataagtattcgagatgcttcaaattcaatattccaaaggggtggcacaaggccttgac |
112 |
Q |
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| T |
39641498 |
cacagacaaatgagcaatcagaggccttagaaaaggttttagataagtattcgagatgcttcaaattcaatattccaaaggggtggcacaaggccttgac |
39641597 |
T |
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| Q |
113 |
ctgggccaagtattggtataataataacaccctttcgaacaagcatatccacgactccgatcaaaattactcagatatacacctaacctaaatgattcac |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39641598 |
ctgggccaagtattggtataataataacaccctttcgaacaagcatatccacgactccgatcaaaattactcagatatacacctaacctaaatgattcac |
39641697 |
T |
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| Q |
213 |
atgaaattcaggagcaacttactcacatagatgtggttta |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
39641698 |
atgaaattcaggagcaacttactcacatagatgtggttta |
39641737 |
T |
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