View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17668_high_51 (Length: 234)
Name: NF17668_high_51
Description: NF17668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17668_high_51 |
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Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 31825089 - 31825301
Alignment:
| Q |
1 |
ataacaaaatgtttcataaatatgcctaagattggtcttgaaccaacactatttttgcaaaaaggacaactttacacgaacctacgactgtaagtctaca |
100 |
Q |
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| T |
31825089 |
ataacaaaatgtttcataaatatgcctaagattggtcttgaaccaacactatttttgcaaaaaggacaactttacacgaacctacgactgtaagtctaca |
31825188 |
T |
|
| Q |
101 |
attgttttttcttttatacttttactttatccaaatttcaattatcaatatttctaattcgattaaaattatatggactactgtcaaaagaaaatgttat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
31825189 |
attgttttttcttttatacttttactttatccaaatttcaattatcaatatttctaattcgattaaaattatatggactacagtcaaaagaaaatgttat |
31825288 |
T |
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| Q |
201 |
ttcttatttggtt |
213 |
Q |
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||||||||||||| |
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| T |
31825289 |
ttcttatttggtt |
31825301 |
T |
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