View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17668_high_57 (Length: 221)
Name: NF17668_high_57
Description: NF17668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17668_high_57 |
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Alignment Details
Target: chr7 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 15 - 203
Target Start/End: Original strand, 26944564 - 26944757
Alignment:
| Q |
15 |
caaagggtgagaaaaccaaaatctactaaacagaagctataagaattagcatatatgtttttcttacaatgaagatacaatgctattacttatgtttttc |
114 |
Q |
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| T |
26944564 |
caaagggtgagaaaaccaaaatctactaaacagaagctataagaattagcatatatgtttttcttacaatgaagatacaatgctattacttatgtttttc |
26944663 |
T |
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| Q |
115 |
ttacatggaaatgtta-----attttagtagaaaatattgaactatggacctcctttaattaatttgaaatgggtaattggcagatgaacaaag |
203 |
Q |
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| T |
26944664 |
ttacatgcaaatgttaattatattttagtagaaaatattgaactatggacctcctttaattaatttcaaatgggtaattggcagatgaacaaag |
26944757 |
T |
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