View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17668_low_8 (Length: 613)
Name: NF17668_low_8
Description: NF17668
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17668_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 556; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 556; E-Value: 0
Query Start/End: Original strand, 24 - 595
Target Start/End: Original strand, 2636610 - 2637181
Alignment:
| Q |
24 |
aaaaaagtgtagggtagttactagttatgttccaagttttattttattttatctagaggtagttatttttataggtagttatgttccaagttgcatagca |
123 |
Q |
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| T |
2636610 |
aaaacagtgtagggtagttactagttatgttccaagttttattttattttatctagaggtagttatttttataggtagttatgttccaagttgcatagca |
2636709 |
T |
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| Q |
124 |
ttatcaaaataaattaaatgcataatgtagaccgtacgatcagatctcatgtggctcacatcactgatgataatgaaccgacaccacgtgtcagataatt |
223 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
2636710 |
ttataaaaataaattaaatgcataatgtagaccgtacgatcagatctcatgtggctcacatcactgatgataatgaaccgacaccacgtgtcagatagtt |
2636809 |
T |
|
| Q |
224 |
gtttgtcaaaataaggacaactctttagtaatgggtgtacccaataaatgtttcacccaaaccccattcacattcattactctataaataccctacattc |
323 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2636810 |
gtttgtcaaaataaggacaactctttagtaatgggtgtacccaataaatgtttcacccaaaccccattcacattcattactctataaataccctacattc |
2636909 |
T |
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| Q |
324 |
attctaacttgatcccacatctcctcattaatatctcatttggttctctcttacctacaaagagagtttttccaaatctagaggtgctacaatggccatg |
423 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2636910 |
attctaacttgatcccacatctcctcattaatatctcatttggttctctcttacctacaaagagagtttttccaaatctagaggtgctacaatggccatg |
2637009 |
T |
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| Q |
424 |
actaagttctttgcttctttcatcttagcactcattgcaatttccatgcttcaaacattggttagtatttaatgttaaagatccaaatacacttatttgt |
523 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2637010 |
actaagttctttgcttctttgatcttagcactcattgcaatttccatgcttcaaacattggttagtatttaatgttaaagatccaaatacacttatttgt |
2637109 |
T |
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| Q |
524 |
cactaattgagtagtggttagtgtaagaaattatgtagtgcttacatttgaatgtatggtttgatttttcag |
595 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2637110 |
cactaattgagtagtggttagtgtaagaaattatgtagtgcttacatttgaatgtatggtttgatttttcag |
2637181 |
T |
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