View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1766_low_7 (Length: 228)
Name: NF1766_low_7
Description: NF1766
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1766_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 213
Target Start/End: Original strand, 41742655 - 41742850
Alignment:
| Q |
18 |
accatgaggcttcatgcctaacccaagcaagaacatttttagacaactattcaaatataacgcttccttttaattaccatccatttgatattactgaata |
117 |
Q |
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| T |
41742655 |
accatgaggcttcatgcctaacccaagcaagaacatttttagacaactattcaaatataacgcttccttttaattaccatccatttgatattactgaata |
41742754 |
T |
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| Q |
118 |
acttctagagcaaaaaggatgccccaaagttttgaagcttaaaattaaatttgatttaaaacaaatgattatgattgtttaaatcccctctctgtg |
213 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41742755 |
acttctagagcaaaaaggatgacccaaagttttgaagcttaaaattaaatttgatttaaaacaaatgattatgattgtttaaatcccctctctgtg |
41742850 |
T |
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