View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17670_high_8 (Length: 291)
Name: NF17670_high_8
Description: NF17670
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17670_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-150; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-150
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 37084425 - 37084696
Alignment:
| Q |
1 |
ttgtgaaatcaaaaggtttgcaaaggccttacaatacacttgctttattttcttctacgttttctgccactttcatcagatgaatgggagctccgcaagg |
100 |
Q |
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| T |
37084425 |
ttgtgaaatcaaaaggtttgcaaaggccttacaatacacttgctttattttcttctacgttttctgccactttcatcagatgaatgggagctccgcaagg |
37084524 |
T |
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| Q |
101 |
tcaaacttttatagtagacgcgtagattcttagtaagctcgccaagtccaatcgacgtgaagaagttagtggaaaaccgtgtgtttcttgtgctatcttt |
200 |
Q |
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| T |
37084525 |
tcaaacttttatagtagacgcgtagattcttagtaagctcgccaagtccaatcgacgtgaagaagttaatggaaaaccgtgtgtttcttgtgctatcttt |
37084624 |
T |
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| Q |
201 |
gggaaatattgattcaaaacagtcctgcattgctggatcattcaaccgctcattcagcacatgtatgccaag |
272 |
Q |
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| T |
37084625 |
gggaaatattgattcaaaacagtcctgcattgctggatcattcaaccgctcattcagcacatgtatgccaag |
37084696 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 6 - 272
Target Start/End: Complemental strand, 37184850 - 37184584
Alignment:
| Q |
6 |
aaatcaaaaggtttgcaaaggccttacaatacacttgctttattttcttctacgttttctgccactttcatcagatgaatgggagctccgcaaggtcaaa |
105 |
Q |
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| T |
37184850 |
aaatcaaaaggtttgcaagggccttaaaatgcatttgctttattttcttctacgttttctgccactttcatccaatgaatgggagctccgcaaggtcaga |
37184751 |
T |
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| Q |
106 |
cttttatagtagacgcgtagattcttagtaagctcgccaagtccaatcgacgtgaagaagttagtggaaaaccgtgtgtttcttgtgctatctttgggaa |
205 |
Q |
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| T |
37184750 |
tttttcaaatagacgcctagattcttagtaagctcgccaagtccaatcgacgtgaagaagttaatggaaaaccgtgtgttttttgtgctatctttgggaa |
37184651 |
T |
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| Q |
206 |
atattgattcaaaacagtcctgcattgctggatcattcaaccgctcattcagcacatgtatgccaag |
272 |
Q |
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||| |||||||||||| ||||||||| |||||||||||||||| ||||||||||| || |||||||| |
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| T |
37184650 |
ataatgattcaaaacaatcctgcattactggatcattcaaccgatcattcagcacctggatgccaag |
37184584 |
T |
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