View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17671_low_6 (Length: 344)

Name: NF17671_low_6
Description: NF17671
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17671_low_6
NF17671_low_6
[»] chr2 (36 HSPs)
chr2 (68-183)||(21630868-21630983)
chr2 (182-330)||(36764751-36764899)
chr2 (184-344)||(39618028-39618187)
chr2 (184-323)||(10865184-10865321)
chr2 (184-344)||(43201374-43201533)
chr2 (183-300)||(36766101-36766218)
chr2 (183-323)||(45227216-45227353)
chr2 (183-298)||(39619273-39619389)
chr2 (184-323)||(32946649-32946787)
chr2 (74-145)||(21631073-21631146)
chr2 (182-227)||(17815460-17815505)
chr2 (179-227)||(17816283-17816330)
chr2 (183-227)||(5439109-5439153)
chr2 (183-227)||(9707866-9707910)
chr2 (183-227)||(19223699-19223743)
chr2 (179-227)||(28243420-28243467)
chr2 (179-227)||(41287479-41287527)
chr2 (184-227)||(9758284-9758327)
chr2 (184-227)||(15830996-15831038)
chr2 (184-227)||(22063901-22063944)
chr2 (184-227)||(29366615-29366657)
chr2 (193-272)||(36657656-36657735)
chr2 (184-250)||(39257430-39257497)
chr2 (180-227)||(44257982-44258029)
chr2 (185-227)||(4647103-4647145)
chr2 (183-217)||(25991861-25991895)
chr2 (185-227)||(41286276-41286318)
chr2 (183-227)||(121507-121551)
chr2 (202-230)||(4592645-4592673)
chr2 (183-227)||(5440093-5440137)
chr2 (183-227)||(16057270-16057314)
chr2 (179-227)||(18059470-18059518)
chr2 (183-227)||(28780080-28780124)
chr2 (183-227)||(33869625-33869668)
chr2 (183-227)||(39500265-39500309)
chr2 (183-227)||(40598418-40598462)
[»] chr8 (49 HSPs)
chr8 (183-344)||(35124580-35124741)
chr8 (184-344)||(11680170-11680330)
chr8 (184-344)||(35123237-35123396)
chr8 (182-344)||(11681522-11681684)
chr8 (184-344)||(32672291-32672450)
chr8 (184-323)||(767580-767719)
chr8 (181-344)||(14864969-14865131)
chr8 (184-344)||(14866062-14866222)
chr8 (184-344)||(27242946-27243105)
chr8 (184-344)||(27254521-27254680)
chr8 (184-344)||(32673629-32673790)
chr8 (202-344)||(27241619-27241760)
chr8 (202-344)||(27247492-27247633)
chr8 (187-344)||(12128035-12128191)
chr8 (184-296)||(32219538-32219650)
chr8 (185-344)||(12126735-12126892)
chr8 (181-344)||(32220756-32220916)
chr8 (179-227)||(12765148-12765196)
chr8 (184-227)||(25817-25860)
chr8 (184-227)||(40449826-40449869)
chr8 (182-227)||(17925305-17925350)
chr8 (182-227)||(41578143-41578188)
chr8 (183-227)||(9737200-9737244)
chr8 (183-227)||(14450802-14450846)
chr8 (179-227)||(31203865-31203913)
chr8 (179-227)||(39324455-39324503)
chr8 (179-227)||(44672054-44672102)
chr8 (184-227)||(4482367-4482410)
chr8 (184-227)||(12383074-12383117)
chr8 (184-227)||(14449963-14450006)
chr8 (184-227)||(15564521-15564564)
chr8 (184-227)||(22720757-22720800)
chr8 (184-227)||(44444809-44444851)
chr8 (184-230)||(14790672-14790718)
chr8 (182-227)||(3178601-3178646)
chr8 (183-227)||(20165950-20165992)
chr8 (183-227)||(10443057-10443101)
chr8 (183-227)||(11856011-11856055)
chr8 (182-230)||(14791543-14791591)
chr8 (183-227)||(15211598-15211642)
chr8 (183-227)||(18809569-18809612)
chr8 (179-227)||(20166760-20166808)
chr8 (183-227)||(24574045-24574089)
chr8 (183-227)||(28775999-28776043)
chr8 (179-227)||(29100619-29100667)
chr8 (183-227)||(31127729-31127773)
chr8 (183-227)||(38713362-38713406)
chr8 (179-227)||(42355542-42355590)
chr8 (183-227)||(44879888-44879932)
[»] chr4 (75 HSPs)
chr4 (182-344)||(16508097-16508259)
chr4 (183-344)||(16506868-16507029)
chr4 (179-344)||(50664376-50664541)
chr4 (184-344)||(2613631-2613791)
chr4 (184-344)||(50662995-50663155)
chr4 (184-344)||(55978475-55978635)
chr4 (179-344)||(56063642-56063808)
chr4 (184-344)||(56065105-56065264)
chr4 (181-344)||(2217106-2217269)
chr4 (184-344)||(2614976-2615136)
chr4 (183-344)||(2215784-2215945)
chr4 (183-344)||(23100937-23101098)
chr4 (184-323)||(52897689-52897826)
chr4 (184-323)||(677046-677185)
chr4 (183-344)||(52896306-52896466)
chr4 (183-344)||(23102257-23102418)
chr4 (184-230)||(3880855-3880900)
chr4 (182-227)||(41611495-41611540)
chr4 (175-227)||(39334468-39334519)
chr4 (184-227)||(26171677-26171720)
chr4 (184-227)||(47308449-47308492)
chr4 (181-227)||(36870094-36870140)
chr4 (181-227)||(48800472-48800518)
chr4 (182-227)||(50605278-50605323)
chr4 (170-230)||(621625-621685)
chr4 (183-227)||(1862185-1862228)
chr4 (179-227)||(21659246-21659294)
chr4 (179-227)||(22535192-22535240)
chr4 (179-227)||(25706183-25706231)
chr4 (183-227)||(30317557-30317601)
chr4 (183-227)||(34016855-34016899)
chr4 (183-227)||(34733326-34733369)
chr4 (183-227)||(37998837-37998881)
chr4 (183-227)||(47309263-47309306)
chr4 (179-227)||(48614143-48614191)
chr4 (180-227)||(1195756-1195803)
chr4 (180-227)||(13993723-13993769)
chr4 (184-227)||(36077330-36077373)
chr4 (184-227)||(50181251-50181294)
chr4 (179-222)||(55979730-55979772)
chr4 (181-227)||(19169289-19169335)
chr4 (181-227)||(37998028-37998074)
chr4 (181-227)||(56279764-56279809)
chr4 (179-217)||(56444281-56444319)
chr4 (179-216)||(1566011-1566048)
chr4 (186-227)||(1617841-1617882)
chr4 (186-227)||(6194952-6194993)
chr4 (183-227)||(6334989-6335034)
chr4 (183-227)||(6335939-6335984)
chr4 (182-227)||(21861214-21861258)
chr4 (182-227)||(21917077-21917121)
chr4 (182-227)||(22525333-22525377)
chr4 (182-227)||(22731055-22731100)
chr4 (182-227)||(23591299-23591344)
chr4 (179-224)||(42987003-42987048)
chr4 (182-227)||(55082431-55082476)
chr4 (183-227)||(917772-917816)
chr4 (183-227)||(1613444-1613488)
chr4 (179-227)||(6239174-6239222)
chr4 (179-227)||(6259878-6259926)
chr4 (183-227)||(7971921-7971965)
chr4 (183-227)||(15031882-15031926)
chr4 (183-227)||(18436386-18436430)
chr4 (179-227)||(19537709-19537756)
chr4 (183-227)||(23162034-23162078)
chr4 (179-227)||(23466442-23466490)
chr4 (202-230)||(27454934-27454962)
chr4 (183-227)||(28255984-28256027)
chr4 (183-227)||(32859923-32859967)
chr4 (181-213)||(34018720-34018752)
chr4 (183-227)||(37687494-37687538)
chr4 (183-227)||(42260362-42260406)
chr4 (179-227)||(42593629-42593677)
chr4 (183-227)||(50182088-50182132)
chr4 (183-227)||(52647397-52647441)
[»] chr7 (52 HSPs)
chr7 (179-344)||(35394666-35394831)
chr7 (184-344)||(31286820-31286980)
chr7 (184-344)||(31285469-31285630)
chr7 (184-323)||(35393163-35393302)
chr7 (183-319)||(29721062-29721195)
chr7 (184-323)||(34894195-34894334)
chr7 (184-274)||(26157272-26157362)
chr7 (180-227)||(29418193-29418240)
chr7 (182-227)||(19071437-19071482)
chr7 (183-227)||(26928070-26928114)
chr7 (181-227)||(18226128-18226174)
chr7 (180-230)||(25143340-25143389)
chr7 (182-227)||(14103966-14104010)
chr7 (182-227)||(14413983-14414027)
chr7 (184-229)||(23350522-23350566)
chr7 (174-227)||(35499406-35499459)
chr7 (179-227)||(12231002-12231050)
chr7 (183-227)||(29417150-29417194)
chr7 (183-227)||(34346016-34346060)
chr7 (202-233)||(3987322-3987353)
chr7 (184-227)||(5852388-5852431)
chr7 (184-227)||(17774288-17774331)
chr7 (179-222)||(19488575-19488618)
chr7 (184-227)||(21125707-21125750)
chr7 (183-250)||(23351660-23351726)
chr7 (184-227)||(30022456-30022499)
chr7 (184-227)||(33227667-33227710)
chr7 (181-227)||(18829060-18829105)
chr7 (185-227)||(28294240-28294282)
chr7 (181-227)||(46100961-46101007)
chr7 (182-227)||(5668243-5668288)
chr7 (182-227)||(34345218-34345263)
chr7 (182-227)||(40260657-40260702)
chr7 (183-227)||(44378790-44378832)
chr7 (183-227)||(44387657-44387699)
chr7 (182-227)||(46230262-46230307)
chr7 (183-227)||(3627935-3627979)
chr7 (181-217)||(7337160-7337196)
chr7 (183-227)||(7463014-7463058)
chr7 (183-227)||(10464040-10464083)
chr7 (183-227)||(11455416-11455460)
chr7 (183-227)||(24212304-24212348)
chr7 (183-227)||(28312586-28312630)
chr7 (183-227)||(36644032-36644075)
chr7 (183-227)||(38170900-38170944)
chr7 (183-227)||(41080261-41080305)
chr7 (179-227)||(41408868-41408915)
chr7 (183-227)||(41409649-41409693)
chr7 (183-227)||(43082163-43082206)
chr7 (179-227)||(44388468-44388516)
chr7 (183-227)||(45258918-45258961)
chr7 (183-227)||(47171024-47171068)
[»] chr3 (79 HSPs)
chr3 (184-344)||(49725941-49726101)
chr3 (184-344)||(52946366-52946526)
chr3 (183-344)||(1137563-1137724)
chr3 (184-344)||(52118218-52118378)
chr3 (184-344)||(1136240-1136400)
chr3 (183-323)||(11032386-11032526)
chr3 (184-344)||(52947742-52947901)
chr3 (183-344)||(34649874-34650035)
chr3 (184-344)||(34651336-34651496)
chr3 (184-344)||(40954645-40954805)
chr3 (184-320)||(11033741-11033877)
chr3 (184-296)||(51149966-51150077)
chr3 (179-344)||(49964673-49964839)
chr3 (184-344)||(25580785-25580943)
chr3 (184-321)||(32610819-32610956)
chr3 (184-238)||(49724626-49724680)
chr3 (184-296)||(25582422-25582535)
chr3 (184-230)||(52116910-52116956)
chr3 (183-227)||(11652851-11652895)
chr3 (183-227)||(40066635-40066679)
chr3 (183-275)||(43640785-43640877)
chr3 (182-250)||(43643835-43643903)
chr3 (184-227)||(20820307-20820350)
chr3 (184-227)||(35234839-35234882)
chr3 (184-227)||(46651222-46651265)
chr3 (184-275)||(55455882-55455972)
chr3 (181-227)||(25360383-25360429)
chr3 (200-302)||(50837476-50837577)
chr3 (181-227)||(54627020-54627066)
chr3 (182-227)||(9104046-9104090)
chr3 (182-227)||(14509170-14509215)
chr3 (182-227)||(17754907-17754952)
chr3 (182-227)||(19056227-19056272)
chr3 (170-227)||(40279225-40279282)
chr3 (178-227)||(45969312-45969361)
chr3 (183-227)||(3938313-3938357)
chr3 (183-227)||(10657209-10657253)
chr3 (183-227)||(13341593-13341637)
chr3 (179-227)||(23781810-23781858)
chr3 (179-227)||(31585335-31585383)
chr3 (182-250)||(32612389-32612456)
chr3 (183-227)||(36026968-36027012)
chr3 (182-222)||(38599706-38599746)
chr3 (183-227)||(44518252-44518296)
chr3 (202-234)||(47470741-47470773)
chr3 (256-344)||(52116952-52117040)
chr3 (184-227)||(1033884-1033927)
chr3 (184-227)||(2445292-2445335)
chr3 (184-227)||(6757006-6757049)
chr3 (184-227)||(27656338-27656381)
chr3 (184-227)||(47768098-47768141)
chr3 (184-227)||(49316852-49316895)
chr3 (184-230)||(1577599-1577645)
chr3 (181-227)||(23323204-23323250)
chr3 (254-344)||(49724667-49724757)
chr3 (200-230)||(50838348-50838378)
chr3 (181-227)||(54602156-54602201)
chr3 (182-227)||(4490448-4490492)
chr3 (182-227)||(13342430-13342475)
chr3 (182-227)||(25067540-25067585)
chr3 (182-227)||(33980407-33980452)
chr3 (182-227)||(36791807-36791852)
chr3 (183-227)||(3370840-3370884)
chr3 (183-227)||(5152372-5152415)
chr3 (184-224)||(6756713-6756753)
chr3 (183-227)||(10435412-10435456)
chr3 (179-227)||(20411271-20411318)
chr3 (183-227)||(21577329-21577373)
chr3 (183-227)||(29006552-29006596)
chr3 (183-227)||(29587097-29587141)
chr3 (183-227)||(32951060-32951104)
chr3 (183-227)||(34503687-34503731)
chr3 (183-227)||(35154725-35154769)
chr3 (179-227)||(40163033-40163081)
chr3 (183-227)||(45149874-45149918)
chr3 (183-227)||(50672670-50672714)
chr3 (183-227)||(52960942-52960986)
chr3 (179-227)||(52961725-52961773)
chr3 (202-230)||(54560051-54560079)
[»] chr5 (67 HSPs)
chr5 (182-344)||(19897390-19897552)
chr5 (182-344)||(38559569-38559731)
chr5 (182-344)||(17640351-17640513)
chr5 (184-344)||(43492723-43492883)
chr5 (184-321)||(34088576-34088711)
chr5 (184-344)||(34089905-34090064)
chr5 (183-323)||(38561118-38561256)
chr5 (181-323)||(23094714-23094856)
chr5 (184-323)||(1301227-1301364)
chr5 (184-323)||(1302765-1302902)
chr5 (183-344)||(26626524-26626686)
chr5 (184-344)||(19898760-19898920)
chr5 (184-270)||(17641744-17641830)
chr5 (182-344)||(34384972-34385135)
chr5 (183-344)||(34386414-34386574)
chr5 (184-296)||(43492543-43492654)
chr5 (184-323)||(26625042-26625179)
chr5 (184-230)||(23093239-23093285)
chr5 (179-227)||(17647276-17647324)
chr5 (181-323)||(19877629-19877769)
chr5 (183-227)||(5573962-5574006)
chr5 (254-330)||(23093280-23093356)
chr5 (182-226)||(27500181-27500225)
chr5 (180-227)||(3508886-3508933)
chr5 (184-227)||(41084209-41084252)
chr5 (184-227)||(41210300-41210343)
chr5 (184-230)||(639857-639903)
chr5 (182-227)||(26359924-26359968)
chr5 (183-227)||(4992892-4992936)
chr5 (179-227)||(12403554-12403602)
chr5 (202-234)||(36429300-36429332)
chr5 (184-227)||(729327-729369)
chr5 (184-227)||(1144449-1144492)
chr5 (184-227)||(5382461-5382504)
chr5 (184-227)||(5575109-5575152)
chr5 (184-227)||(9587508-9587551)
chr5 (180-227)||(17526892-17526939)
chr5 (185-227)||(38977559-38977601)
chr5 (181-227)||(39760566-39760612)
chr5 (181-230)||(5348595-5348644)
chr5 (182-227)||(11445895-11445940)
chr5 (182-227)||(12737111-12737156)
chr5 (182-227)||(12799934-12799979)
chr5 (182-227)||(19292225-19292270)
chr5 (182-227)||(21639909-21639954)
chr5 (182-227)||(36811629-36811674)
chr5 (181-222)||(38396215-38396256)
chr5 (183-227)||(459468-459512)
chr5 (183-227)||(970431-970475)
chr5 (183-227)||(4299757-4299801)
chr5 (183-227)||(5790579-5790623)
chr5 (183-227)||(6681326-6681370)
chr5 (183-227)||(6865436-6865480)
chr5 (183-227)||(8408219-8408263)
chr5 (183-227)||(8506073-8506116)
chr5 (183-227)||(17526055-17526099)
chr5 (183-227)||(21632490-21632534)
chr5 (183-227)||(21640737-21640781)
chr5 (183-227)||(22613633-22613677)
chr5 (183-227)||(24325175-24325218)
chr5 (183-227)||(24361800-24361843)
chr5 (183-227)||(33159918-33159962)
chr5 (183-227)||(38091470-38091514)
chr5 (179-227)||(38395376-38395424)
chr5 (179-227)||(39761405-39761453)
chr5 (183-227)||(42341958-42342002)
chr5 (183-227)||(43067514-43067558)
[»] chr1 (83 HSPs)
chr1 (183-344)||(14282779-14282940)
chr1 (183-344)||(14284148-14284309)
chr1 (183-344)||(41706959-41707120)
chr1 (184-344)||(11341969-11342129)
chr1 (184-344)||(11499988-11500148)
chr1 (181-344)||(4564106-4564268)
chr1 (183-302)||(11343351-11343470)
chr1 (183-302)||(11501371-11501490)
chr1 (180-323)||(51304733-51304876)
chr1 (184-344)||(42813750-42813910)
chr1 (183-344)||(16420117-16420277)
chr1 (184-323)||(41729831-41729970)
chr1 (183-344)||(51306246-51306408)
chr1 (184-323)||(38482443-38482580)
chr1 (182-344)||(42813228-42813389)
chr1 (183-344)||(16422014-16422179)
chr1 (184-344)||(46318760-46318919)
chr1 (183-323)||(4562755-4562895)
chr1 (175-227)||(16834356-16834408)
chr1 (184-227)||(24250408-24250451)
chr1 (182-231)||(38480948-38480996)
chr1 (207-344)||(41728825-41728962)
chr1 (182-227)||(46294435-46294480)
chr1 (179-227)||(1798760-1798807)
chr1 (179-227)||(24480518-24480565)
chr1 (179-227)||(37612826-37612874)
chr1 (183-227)||(52869657-52869701)
chr1 (188-227)||(6783934-6783973)
chr1 (184-227)||(18611149-18611192)
chr1 (184-227)||(19076448-19076491)
chr1 (184-227)||(19124338-19124381)
chr1 (184-227)||(24253171-24253214)
chr1 (180-227)||(41115873-41115920)
chr1 (184-227)||(44431180-44431223)
chr1 (185-227)||(11201899-11201941)
chr1 (182-227)||(7875723-7875768)
chr1 (184-229)||(46319184-46319229)
chr1 (183-227)||(1799818-1799862)
chr1 (183-227)||(6783127-6783171)
chr1 (179-227)||(8741720-8741768)
chr1 (183-227)||(18806630-18806674)
chr1 (183-227)||(31196023-31196067)
chr1 (182-222)||(31196864-31196904)
chr1 (183-227)||(38618011-38618055)
chr1 (179-227)||(45507885-45507933)
chr1 (184-227)||(27234232-27234275)
chr1 (184-227)||(34557947-34557990)
chr1 (184-227)||(44209101-44209144)
chr1 (184-227)||(44432331-44432373)
chr1 (184-227)||(48721570-48721612)
chr1 (185-227)||(48803362-48803405)
chr1 (181-227)||(29330125-29330171)
chr1 (181-227)||(45217844-45217890)
chr1 (182-227)||(23740651-23740696)
chr1 (182-227)||(29329288-29329333)
chr1 (182-227)||(38787530-38787575)
chr1 (183-227)||(48803990-48804035)
chr1 (202-234)||(788003-788035)
chr1 (183-227)||(3898495-3898539)
chr1 (183-227)||(6917145-6917188)
chr1 (183-227)||(6918845-6918888)
chr1 (179-227)||(9681081-9681129)
chr1 (183-227)||(13243048-13243092)
chr1 (183-227)||(16266455-16266498)
chr1 (183-227)||(20898513-20898557)
chr1 (183-227)||(20899349-20899393)
chr1 (179-227)||(22776232-22776280)
chr1 (179-227)||(24483036-24483083)
chr1 (183-227)||(24982644-24982688)
chr1 (183-227)||(26441927-26441970)
chr1 (179-227)||(31434653-31434701)
chr1 (183-227)||(32537265-32537309)
chr1 (187-227)||(35393231-35393271)
chr1 (179-227)||(37275578-37275626)
chr1 (183-227)||(43680363-43680407)
chr1 (179-227)||(44397599-44397647)
chr1 (184-224)||(46295574-46295614)
chr1 (256-344)||(46319099-46319187)
chr1 (179-227)||(46803757-46803805)
chr1 (183-227)||(47434290-47434334)
chr1 (187-227)||(48720770-48720810)
chr1 (183-227)||(51619408-51619452)
chr1 (191-227)||(52869915-52869951)
[»] chr6 (28 HSPs)
chr6 (184-344)||(10917859-10918019)
chr6 (181-344)||(4137653-4137815)
chr6 (184-344)||(1387546-1387706)
chr6 (184-344)||(4138870-4139029)
chr6 (183-323)||(10919247-10919387)
chr6 (184-323)||(1378455-1378593)
chr6 (184-323)||(1386203-1386341)
chr6 (183-302)||(17732014-17732133)
chr6 (184-225)||(10624456-10624497)
chr6 (182-227)||(14394670-14394715)
chr6 (182-227)||(34657801-34657846)
chr6 (182-227)||(34658575-34658620)
chr6 (179-227)||(20857547-20857595)
chr6 (184-227)||(11098928-11098971)
chr6 (183-230)||(15347431-15347478)
chr6 (184-227)||(28538341-28538383)
chr6 (179-234)||(30709486-30709541)
chr6 (181-227)||(11624626-11624672)
chr6 (185-227)||(23074300-23074342)
chr6 (181-227)||(23075392-23075438)
chr6 (183-217)||(26609695-26609729)
chr6 (182-227)||(2318523-2318568)
chr6 (182-227)||(8743132-8743177)
chr6 (182-227)||(20856711-20856756)
chr6 (183-227)||(15146612-15146656)
chr6 (202-234)||(15348281-15348313)
chr6 (183-227)||(18739369-18739413)
chr6 (179-227)||(32628718-32628766)
[»] scaffold0031 (2 HSPs)
scaffold0031 (181-227)||(95051-95097)
scaffold0031 (182-227)||(94244-94289)
[»] scaffold0340 (1 HSPs)
scaffold0340 (183-227)||(1330-1374)
[»] scaffold0214 (1 HSPs)
scaffold0214 (182-227)||(1732-1777)
[»] scaffold0060 (1 HSPs)
scaffold0060 (183-227)||(66584-66628)
[»] scaffold0008 (1 HSPs)
scaffold0008 (176-224)||(239154-239202)
[»] scaffold0608 (1 HSPs)
scaffold0608 (184-227)||(1711-1754)
[»] scaffold0498 (1 HSPs)
scaffold0498 (184-227)||(11403-11446)
[»] scaffold0006 (1 HSPs)
scaffold0006 (184-227)||(43458-43501)
[»] scaffold0015 (1 HSPs)
scaffold0015 (181-227)||(42569-42615)
[»] scaffold0102 (1 HSPs)
scaffold0102 (205-234)||(32372-32401)
[»] scaffold0001 (1 HSPs)
scaffold0001 (182-227)||(185595-185640)
[»] scaffold0444 (1 HSPs)
scaffold0444 (179-227)||(8095-8143)
[»] scaffold0078 (1 HSPs)
scaffold0078 (183-227)||(1826-1870)
[»] scaffold0066 (1 HSPs)
scaffold0066 (183-227)||(13608-13652)


Alignment Details
Target: chr2 (Bit Score: 104; Significance: 8e-52; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 68 - 183
Target Start/End: Complemental strand, 21630983 - 21630868
Alignment:
Q  68 tataagtattttgatggttattctttcttatcacgtcatattttagtctttttcagtaaaataaagaagcaatatatatggacccaaatattaaaatgta 167  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21630983 tataagtattttggtggttattctttcttatcacgtcgtattttagtctttttcagtaaaataaagaaacaatatatatggacccaaatattaaaatgta 21630884  T
Q  168 agatgttattcttttt 183  Q
    ||||||||||||||||    
T  21630883 agatgttattcttttt 21630868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 182 - 330
Target Start/End: Original strand, 36764751 - 36764899
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaa-tccccctgaaattgtcgagca 280  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||  ||||||||||| | ||||||  |||||  |||||||| |||     
T  36764751 ttgagtaaatagtcaattacccccc-gaaattgtaactttcgtcaaaaatcccccttaattttgcaaaacgtcaaaaacccccccaaaaattgtcaagcg 36764849  T
Q  281 gctgtcaattacccccctccgtgaatattctccagccaacatgttaatgt 330  Q
     ||||||||||||||||||||| ||| | ||||| |||||||| ||||||    
T  36764850 tctgtcaattacccccctccgttaatttcctccatccaacatgctaatgt 36764899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 39618028 - 39618187
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||| ||| ||  |||||||||||   |||| | ||||||||||||||| |||  ||    
T  39618028 gagtaaatagtcaattacccccctgaaattgtagctttcgtcaaaaaaccccctaaattttgcaaaacttcaaata-ccccctgaaattgtcaagcgtct 39618126  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| |||||  |||| |||||||| | ||||  ||||| ||||||    
T  39618127 gtcaattacccccctccgttaatatcttccatccaacatgctgatgtggccgttaactgcc 39618187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 184 - 323
Target Start/End: Original strand, 10865184 - 10865321
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    |||||||||||||||||  ||||||||||||||||||| |||||||| ||  ||| ||||||||||||| |||||| || ||||||||| || |||  ||    
T  10865184 gagtaaatagtcaatta--cccctgaaattgtaacttttgtcaaaaaccctcctgaattttgcaaaatgtcaaaaaccctcctgaaattatcaagcgtct 10865281  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    ||||||||||||||||||| ||| | ||||| | ||||||    
T  10865282 gtcaattacccccctccgttaatttcctccatctaacatg 10865321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 43201533 - 43201374
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| |||||||| |||||||||||  ||||||| |||  || ||||||||||| | |||||| || |||||||||||| |||  ||    
T  43201533 gagtaaatagtcaatta-ccccctgatattgtaacttttttcaaaaacccctatgaattttgcaaaacgtcaaaaaacctcctgaaattgtcaagcgtct 43201435  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||| || |||||| ||| | ||||| |||||||||| ||||  ||||| ||||||    
T  43201434 gtcaattactcctctccgttaatttcctccatccaacatgttgatgtggccgttaactgcc 43201374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 300
Target Start/End: Complemental strand, 36766218 - 36766101
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    ||||||||| |||||||| |||   ||||||| ||||||||||||||||| | ||| ||||||||||| | |||||  ||||||||||||||| |||  |    
T  36766218 tgagtaaatggtcaattaccccatcgaaattgcaactttcgtcaaaaatctccctgaattttgcaaaacgtcaaaatcccccctgaaattgtcaagcgtc 36766119  T
Q  283 tgtcaattacccccctcc 300  Q
    |||||||||| |||||||    
T  36766118 tgtcaattacacccctcc 36766101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 45227216 - 45227353
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||| |||  || |||||| |||| | | |||| ||||||||||||||| |||  |    
T  45227216 tgagtaaatagtcaattatcctcc-gaaattgtaactttcgtcaaaaaaccccttgaattttgtaaaacgtc-aaaacccccctgaaattgtcaagcgtc 45227313  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    |||||||||  ||||||||| ||| | ||||| ||||||||    
T  45227314 tgtcaatta-tcccctccgttaatttcctccatccaacatg 45227353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 298
Target Start/End: Complemental strand, 39619389 - 39619273
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaa-tgacaaaaatccccctgaaattgtcgagcag 281  Q
    |||||||||||||||||| || |||||||||||| ||||||||||||| ||| ||| ||||||||||| |   || |  ||||||||||||||| |||      
T  39619389 tgagtaaatagtcaattaccctcctgaaattgtagctttcgtcaaaaacccccctgaattttgcaaaactttaaataccccccctgaaattgtcaagcgt 39619290  T
Q  282 ctgtcaattacccccct 298  Q
     ||||||||||||||||    
T  39619289 ttgtcaattacccccct 39619273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 323
Target Start/End: Original strand, 32946649 - 32946787
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||||||| ||||||||||| |||| ||| ||||||  | || |||||||||||   |||||| |||| |||||||||| | |  |     
T  32946649 gagtaaatagtcaattatccctctgaaattgtagcttttgtc-aaaatcttattgaattttgcaaaacttcaaaaaaccccttgaaattgtcaaacgtca 32946747  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    ||||| |||||||||| || ||| | ||||| ||||||||    
T  32946748 gtcaaatacccccctctgttaatttcctccatccaacatg 32946787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 145
Target Start/End: Complemental strand, 21631146 - 21631073
Alignment:
Q  74 tattttgatggttattctttcttatcacgtcatattttag--tctttttcagtaaaataaagaagcaatatata 145  Q
    ||||||||||||||||||||||||| ||||  | ||||||  | ||||||||||||||||||| ||||||||||    
T  21631146 tattttgatggttattctttcttatgacgttgtgttttagtttttttttcagtaaaataaagaggcaatatata 21631073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 17815460 - 17815505
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||    
T  17815460 ttgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 17815505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 17816330 - 17816283
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  17816330 tttttgagtaaatagtcaatta-ccccctgaaattgtaagtttcgtcaa 17816283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 5439153 - 5439109
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||||||||    
T  5439153 tgagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaa 5439109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 9707866 - 9707910
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| |||||||||||||||| |||| ||||    
T  9707866 tgagtaaatagtcaattacccccctgaaattgtaagtttcatcaa 9707910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 19223743 - 19223699
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  19223743 tgagtaaatagtcaattttccccctgaaattgtaagtttcatcaa 19223699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 28243467 - 28243420
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||||| ||||||||||||||||| |||| ||||    
T  28243467 tttttgagtaaatagtcaatt-tccccctgaaattgtaagtttcatcaa 28243420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 41287527 - 41287479
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||    
T  41287527 tttttgagtaaatagtcaatttctcccctgaaattgtaagtttcgtcaa 41287479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 9758284 - 9758327
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||| |||||| |||||||||||||||| |||||||||    
T  9758284 gagtaaatagacaattacccccctgaaattgtaagtttcgtcaa 9758327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 15831038 - 15830996
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  15831038 gagtaaatagtcaatta-ccccctgaaattgtaagtttcgtcaa 15830996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 22063901 - 22063944
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||| ||||||||||||| |||||||||| |||||||||    
T  22063901 gagtaaataatcaattatccccccgaaattgtaagtttcgtcaa 22063944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 29366657 - 29366615
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||| ||||||||||||||||| |||||||||    
T  29366657 gagtaaatagtcaatt-tccccctgaaattgtaagtttcgtcaa 29366615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 272
Target Start/End: Complemental strand, 36657735 - 36657656
Alignment:
Q  193 gtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaatt 272  Q
    |||||||| |||||| ||||||||||||||||||||||   | ||| |||||||||||   |||||| || |||||||||    
T  36657735 gtcaattacccccctaaaattgtaactttcgtcaaaaacttccctgaattttgcaaaacttcaaaaaccctcctgaaatt 36657656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 39257430 - 39257497
Alignment:
Q  184 gagtaaatagtcaattatcccc-ctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaa 250  Q
    ||||||||||||||||| |||| ||||||||||| ||||| ||||||  ||| ||| |||||||||||    
T  39257430 gagtaaatagtcaattaccccccctgaaattgtagctttcatcaaaagcccccctgaattttgcaaaa 39257497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 44257982 - 44258029
Alignment:
Q  180 ttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||| | ||||||||||||||| |||| ||||    
T  44257982 ttttgagtaaatagtcaatttttcccctgaaattgtaagtttcatcaa 44258029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 227
Target Start/End: Complemental strand, 4647145 - 4647103
Alignment:
Q  185 agtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||| ||||||||||||||||||| ||| |||||||||    
T  4647145 agtaaataggcaattatccccctgaaattataagtttcgtcaa 4647103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 25991861 - 25991895
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaa 217  Q
    ||||||||||||||||| |||||||||||||||||    
T  25991861 tgagtaaatagtcaattttccccctgaaattgtaa 25991895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 41286276 - 41286318
Alignment:
Q  185 agtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||| ||||||||||||||||  |||||||||    
T  41286276 agtaaatagtcaattttccccctgaaattgtaggtttcgtcaa 41286318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 121507 - 121551
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  121507 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 121551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 230
Target Start/End: Original strand, 4592645 - 4592673
Alignment:
Q  202 ccccctgaaattgtaactttcgtcaaaaa 230  Q
    |||||||||||||||||||||||||||||    
T  4592645 ccccctgaaattgtaactttcgtcaaaaa 4592673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 5440093 - 5440137
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| ||||||| ||||||||||||||| |||| ||||    
T  5440093 tgagtaaatagacaattattcccctgaaattgtaagtttcatcaa 5440137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 16057270 - 16057314
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| |||| |||||||||||| |||| ||||    
T  16057270 tgagtaaatagtcaattttccctctgaaattgtaagtttcatcaa 16057314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 18059470 - 18059518
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| ||  ||| |||||||||||| |||||||||    
T  18059470 tttttgagtaaatagtcattttcccctctgaaattgtaagtttcgtcaa 18059518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 28780080 - 28780124
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| ||| || |||||||||||||||| |||||||||    
T  28780080 tgagtaaataggcaactacccccctgaaattgtaagtttcgtcaa 28780124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 33869625 - 33869668
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  33869625 tgagtaaatagtcaatt-tccccctgaaattgtaagtttcatcaa 33869668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 39500265 - 39500309
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| |||| | ||||||||| |||||||||    
T  39500265 tgagtaaatagtcaattacccccataaaattgtaagtttcgtcaa 39500309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 40598418 - 40598462
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  40598418 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 40598462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 8e-46; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 35124741 - 35124580
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||||||||||||||||||| |||  |    
T  35124741 tgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaatccccctgaaattgtcaagcgtc 35124642  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  35124641 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 35124580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 11680170 - 11680330
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  11680170 gagtaaatagtcaattaccctcctgaaattgtaactttcgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 11680269  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  11680270 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 11680330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 35123237 - 35123396
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  35123237 gagtaaatagtcaatta-ccccctgaaattgtaactttcgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 35123335  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||||||| |||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  35123336 gtcaattatccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 35123396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 11681684 - 11681522
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcag 281  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||  || ||||||||||||| |||||| ||||||||||||||  |||      
T  11681684 ttgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccttgaattttgcaaaatgtcaaaaacccccctgaaattgttaagcgt 11681585  T
Q  282 ctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  11681584 ctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 11681522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 32672291 - 32672450
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  32672291 gagtaaatagtcaatta-ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 32672389  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| |  |||| |||||||| | ||||  ||||| ||||||    
T  32672390 gtcaattacccccctccgttaatttcatccatccaacatgctgatgtggccgttaactgcc 32672450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 184 - 323
Target Start/End: Complemental strand, 767719 - 767580
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    |||||||||||||||||  |||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  767719 gagtaaatagtcaattactcccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 767620  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    ||||||||||||||||||| ||| | ||| | ||||||||    
T  767619 gtcaattacccccctccgttaatttcctcaatccaacatg 767580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 181 - 344
Target Start/End: Original strand, 14864969 - 14865131
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagca 280  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||| |||||| |||||| ||||||||||||||| |||     
T  14864969 tttgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaacccccctgaaattgtcaagcg 14865068  T
Q  281 gctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
     |||||||||| |||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  14865069 tctgtcaatta-ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 14865131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 14866222 - 14866062
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaa-tccccctgaaattgtcgagcagc 282  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||||||| |||||| |||| ||||||||||| |||  |    
T  14866222 gagtaaatagtcaattacccccctgaaattgtaactttcttcaaaaatccccctgaattttgcaaaatgtcaaaaactccctctgaaattgtcaagcgtc 14866123  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||| |||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  14866122 tgtcaatta-ccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 14866062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 27243105 - 27242946
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||| |||  || ||||||||||||| ||||||  |||||||||||||| |||  |     
T  27243105 gagtaaatagtcaattacccccctgaaattataactttcgtcaaaaacccccatgaattttgcaaaatgtcaaaaactcccctgaaattgtcaagcgtcc 27243006  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||| ||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  27243005 gtcaattac-cccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 27242946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 27254680 - 27254521
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||| |||  || ||||||||||||| ||||||  |||||||||||||| |||  |     
T  27254680 gagtaaatagtcaattacccccctgaaattataactttcgtcaaaaacccccatgaattttgcaaaatgtcaaaaactcccctgaaattgtcaagcgtcc 27254581  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||| ||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  27254580 gtcaattac-cccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 27254521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 32673790 - 32673629
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||| ||| || ||| |||||||||||||||||||||||  | ||| ||||||||||||  |||||| ||||||||||||||| |||  ||    
T  32673790 gagtaaatagtcatttaccctcctcaaattgtaactttcgtcaaaaatttccctgaattttgcaaaatatcaaaaacccccctgaaattgtcaagcgtct 32673691  T
Q  284 gtcaattacccccc-tccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||||||||||||| ||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  32673690 gtcaattaccccccttccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 32673629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 27241619 - 27241760
Alignment:
Q  202 ccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagctgtcaattacccccctccg 301  Q
    |||||| ||||||||||||||||||||||  || ||| ||||||||||||| |||||||||| |||| |||||| |||  ||||||||||  ||||||||    
T  27241619 ccccctaaaattgtaactttcgtcaaaaactcccctgaattttgcaaaatgtcaaaaatccctctgatattgtcaagcgtctgtcaatta-tcccctccg 27241717  T
Q  302 tgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    | ||| ||||||| |||||||| | ||||  ||||| ||||||    
T  27241718 ttaattttctccatccaacatgctgatgtggccgttaactgcc 27241760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 344
Target Start/End: Original strand, 27247492 - 27247633
Alignment:
Q  202 ccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagctgtcaattacccccctccg 301  Q
    |||||| ||||||||||||||||||||||  || ||| ||||||||||||| |||||||||| |||| |||||| |||  ||||||||||  ||||||||    
T  27247492 ccccctaaaattgtaactttcgtcaaaaactcccctgaattttgcaaaatgtcaaaaatccctctgatattgtcaagcgtctgtcaatta-tcccctccg 27247590  T
Q  302 tgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    | ||| ||||||| |||||||| | ||||  ||||| ||||||    
T  27247591 ttaattttctccatccaacatgctgatgtggccgttaactgcc 27247633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 187 - 344
Target Start/End: Complemental strand, 12128191 - 12128035
Alignment:
Q  187 taaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagctgtc 286  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| |  ||| |||||||||||   |||| |  ||| |||||||||| |||  |||||    
T  12128191 taaatagtcaatta-ccccctggaattgtaactttcgtcaaaaattctcctgaattttgcaaaacttcaaatactcccttgaaattgtcaagcgtctgtc 12128093  T
Q  287 aattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||||||||||||||| |||||  |||| |||||||| | ||||  ||||| ||||||    
T  12128092 aattacccccctccgttaatatcttccatccaacatgctgatgtggccgttaactgcc 12128035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 32219538 - 32219650
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| |||| ||||||||||| |||||||||||||| | ||  |||||||||||   |||| | ||||||||||||||| |||  ||    
T  32219538 gagtaaatagtcaattacccccttgaaattgtaattttcgtcaaaaatctccctaaattttgcaaaacttcaaatacccccctgaaattgtcaagcgtct 32219637  T
Q  284 gtcaattaccccc 296  Q
    |||||||||||||    
T  32219638 gtcaattaccccc 32219650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 344
Target Start/End: Original strand, 12126735 - 12126892
Alignment:
Q  185 agtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagctg 284  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||     ||| |||||||||||   |||| | ||||||||||||||  |||  |||    
T  12126735 agtaaatagtcaatta-ccccttgaaattgtagctttcgtcaaaaaaatttctgaattttgcaaaacttcaaatacccccctgaaattgttaagcgtctg 12126833  T
Q  285 tcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||| |||| ||||| ||||| ||||| |||||||||| ||||  ||||| ||||||    
T  12126834 tcaatta-ccccttccgttaatatcctccatccaacatgttgatgtggccgttaactgcc 12126892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 344
Target Start/End: Complemental strand, 32220916 - 32220756
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagca 280  Q
    ||||||||||||||||||||| ||||| ||||||||  |||||||||||| ||| ||  |||||||||||   |||| | |||| | |||||||| |||     
T  32220916 tttgagtaaatagtcaattat-cccctaaaattgtagttttcgtcaaaaa-ccctctaaattttgcaaaacttcaaatacccccttaaaattgtcaagcg 32220819  T
Q  281 gctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
     |||||||||| ||||||| || |||||  |||| |||||||||| ||||  ||||| ||||||    
T  32220818 tctgtcaatta-ccccctcggttaatatcatccatccaacatgttgatgtggccgttaactgcc 32220756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 12765196 - 12765148
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  12765196 tttttgagtaaatagtcaattttccccttgaaattgtaagtttcgtcaa 12765148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 25817 - 25860
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||||| |||||||||||| |||||||||    
T  25817 gagtaaatagtcaattatccctctgaaattgtaagtttcgtcaa 25860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 40449826 - 40449869
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  40449826 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 40449869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 17925350 - 17925305
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||| ||||| |||||||||||||||| |||||||||    
T  17925350 ttgagtaaatagtgaattacccccctgaaattgtaagtttcgtcaa 17925305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 41578188 - 41578143
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  |||||||||||||||| |||||||||    
T  41578188 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaa 41578143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 9737244 - 9737200
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| |||||||||||||||| |||| ||||    
T  9737244 tgagtaaatagtcaattaaccccctgaaattgtaagtttcatcaa 9737200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 14450846 - 14450802
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  14450846 tgagtaaatagtcaattttccccctgaaattgtaagtttcatcaa 14450802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 31203865 - 31203913
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||| ||||||||||||||||  |||||||||||||||| |||||||||    
T  31203865 ttttagagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaa 31203913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 39324455 - 39324503
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||  |||||||||||||||| |||| ||||    
T  39324455 tttttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 39324503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 44672102 - 44672054
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||| ||||||||||||||||  |||||||||||||||| |||||||||    
T  44672102 ttttcgagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaa 44672054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 4482367 - 4482410
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||  |||||||||||||||| |||||||||    
T  4482367 gagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaa 4482410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 12383074 - 12383117
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||    
T  12383074 gagtaaatagtcaattttccccctgaaattgtaagtttcatcaa 12383117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 14449963 - 14450006
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||    
T  14449963 gagtaaatagtcaattttccccctgaaattgtaagtttcatcaa 14450006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 15564521 - 15564564
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||| ||||||||| ||| |||||||||    
T  15564521 gagtaaatagtcaattatcctcctgaaattataagtttcgtcaa 15564564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 22720800 - 22720757
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||    
T  22720800 gagtaaataatcaattatcctcctgaaattgtaagtttcgtcaa 22720757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 44444809 - 44444851
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  44444809 gagtaaatagtcaatta-ccccctgaaattgtaagtttcgtcaa 44444851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 14790672 - 14790718
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaa 230  Q
    |||||||||| |||  | |||||||||||||||||||||||||||||    
T  14790672 gagtaaataggcaaaaaaccccctgaaattgtaactttcgtcaaaaa 14790718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 3178646 - 3178601
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  || ||||||||||||| |||||||||    
T  3178646 ttgagtaaatagtcaatttccctcctgaaattgtaagtttcgtcaa 3178601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 20165950 - 20165992
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||    
T  20165950 tgagtaaatagtcaatta--cccctgaaattgtaagtttcgtcaa 20165992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 10443057 - 10443101
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  10443057 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 10443101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 11856011 - 11856055
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  11856011 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 11856055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 14791591 - 14791543
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaa 230  Q
    |||||||||||| |||  | ||||||||||||||| |||||||||||||    
T  14791591 ttgagtaaataggcaaaaacccccctgaaattgtagctttcgtcaaaaa 14791543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 15211642 - 15211598
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||| ||||||||||||| |||| ||||    
T  15211642 tgagtaaatagtcaattttcctcctgaaattgtaagtttcatcaa 15211598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 18809569 - 18809612
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  18809569 tgagtaaatagtcaatt-tccccctgaaattgtaagtttcatcaa 18809612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 20166808 - 20166760
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||| |||||||||||||||| |||| || ||||||||| |||||||||    
T  20166808 ttttcgagtaaatagtcaattttccctctaaaattgtaagtttcgtcaa 20166760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 24574089 - 24574045
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  24574089 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 24574045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 28775999 - 28776043
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  28775999 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 28776043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 29100619 - 29100667
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||| ||||||||||||||||  |||||||||||||||| |||| ||||    
T  29100619 ttttcgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 29100667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 31127773 - 31127729
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  31127773 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 31127729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 38713362 - 38713406
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| |||||| |||||| ||||||||| |||||||||    
T  38713362 tgagtaaataggcaattacccccctcaaattgtaagtttcgtcaa 38713406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 42355542 - 42355590
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||||| | || |||||||||||  |||||||||    
T  42355542 tttttgagtaaatagtcaatttttcctctgaaattgtaggtttcgtcaa 42355590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 44879932 - 44879888
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||||||||| ||  |||||||||    
T  44879932 tgagtaaatagtcaattttccccctgaaattataggtttcgtcaa 44879888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 5e-44; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 16508259 - 16508097
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcag 281  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||| |||      
T  16508259 ttgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgt 16508160  T
Q  282 ctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  16508159 ctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 16508097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 16506868 - 16507029
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||| |||  |    
T  16506868 tgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaaaccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtc 16506967  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  16506968 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 16507029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 179 - 344
Target Start/End: Complemental strand, 50664541 - 50664376
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgag 278  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||| ||    
T  50664541 ttttggagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaag 50664442  T
Q  279 cagctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |  ||||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  50664441 cgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 50664376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 2613631 - 2613791
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  2613631 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 2613730  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  2613731 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 2613791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 50662995 - 50663155
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  50662995 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 50663094  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  50663095 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 50663155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 55978475 - 55978635
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||  || ||| ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  55978475 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaactcccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 55978574  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  55978575 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 55978635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 179 - 344
Target Start/End: Original strand, 56063642 - 56063808
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgac-aaaaatccccctgaaattgtcga 277  Q
    |||| ||||||||||||||||| ||||||||||||||||||||| ||||||| ||| ||| ||||||||||||| | ||||| ||||||||||||||| |    
T  56063642 ttttggagtaaatagtcaattacccccctgaaattgtaactttcatcaaaaacccccctgaattttgcaaaatgtcaaaaaacccccctgaaattgtcaa 56063741  T
Q  278 gcagctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||  ||||||||||||||||||||| ||| ||||||| |||||||| | ||||  ||||| ||||||    
T  56063742 gcgtctgtcaattacccccctccgttaattttctccatccaacatgctgatgtagccgttaactgcc 56063808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 56065264 - 56065105
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||  || ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  56065264 gagtaaatagtcaatta-ccccctgaaattgtaactttcgtcaaaaacccccatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 56065166  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  56065165 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 56065105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 181 - 344
Target Start/End: Complemental strand, 2217269 - 2217106
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagca 280  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| | |  || ||||||||||||| |||||| ||||||||||||||| |||     
T  2217269 tttgagtaaatagtcaattacccccttgaaattgtaactttcgtcaaaaacctccatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcg 2217170  T
Q  281 gctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
     ||||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  2217169 tctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 2217106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 2615136 - 2614976
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||  |   || ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  2615136 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaaaacacatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 2615037  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  2615036 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 2614976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 2215784 - 2215945
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||| ||   || ||||||||||||| |||||| ||||||||||||| | |||  |    
T  2215784 tgagtaaatagtcaattacccccctaaaattgtaactttcgtcaaaaaccctcatgaattttgcaaaatgtcaaaaacccccctgaaattgccaagcgtc 2215883  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  2215884 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 2215945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 23100937 - 23101098
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    |||||||||||||||||| |||||| |||||||| ||||||||||||| ||| ||| |||||||||||   |||| | |||||| |||||||| |||  |    
T  23100937 tgagtaaatagtcaattacccccctaaaattgtacctttcgtcaaaaacccccctgaattttgcaaaacttcaaatacccccctaaaattgtcaagcgtc 23101036  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||||||||||||||||||| ||||| ||||| |||||||| | ||||  ||||| ||||||    
T  23101037 tgtcaattacccccctccgttaatatcctccatccaacatgctgatgtggccgttaactgcc 23101098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 184 - 323
Target Start/End: Complemental strand, 52897826 - 52897689
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    |||||||||||||||||  |||||||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||  || ||||||||||| |||  |     
T  52897826 gagtaaatagtcaatta--cccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaaaacctctgaaattgtcaagcgtcg 52897729  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    ||||||||||||||||||| ||| | ||||| ||||||||    
T  52897728 gtcaattacccccctccgttaatttcctccatccaacatg 52897689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 184 - 323
Target Start/End: Original strand, 677046 - 677185
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||  ||| |||||||||||||  ||||| |||  |||||||||| |||  ||    
T  677046 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaaccctcctgaattttgcaaaatgtaaaaaacccctatgaaattgtcaagcgtct 677145  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    ||||||||||||||| ||| ||| | ||||| ||||||||    
T  677146 gtcaattaccccccttcgttaatttcctccatccaacatg 677185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 52896306 - 52896466
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||| ||| ||| |||||| |||||| |||||| || | |||||||||| |||  |    
T  52896306 tgagtaaatagtcaatta-ccctttgaaattgtaactttcgtcaaaaacccctctgaattttgtaaaatgtcaaaaaccctcttgaaattgtcaagcgtc 52896404  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  52896405 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 52896466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 23102418 - 23102257
Alignment:
Q  183 tgagtaaatagtcaattatccccc-tgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcag 281  Q
    |||||||||||||||||| ||||| |||||||||| ||||||||||||| ||| ||| |||||||||||   |||| | ||||||||||||||| |||      
T  23102418 tgagtaaatagtcaattaccccccctgaaattgtagctttcgtcaaaaacccccctgaattttgcaaaacttcaaatacccccctgaaattgtcaagcgt 23102319  T
Q  282 ctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
     |||||||||| ||||||||| |||||  |||| |||||||| | ||||  ||||| ||||||    
T  23102318 ttgtcaattac-cccctccgttaatatcttccatccaacatgctgatgtggccgttaactgcc 23102257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 3880855 - 3880900
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaa 230  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  3880855 gagtaaatagtcaatta-ccccctgaaattgtaactttcgtcaaaaa 3880900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 41611540 - 41611495
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||    
T  41611540 ttgagtaaatagacaattatccccctgaaattgtaagtttcgtcaa 41611495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 39334519 - 39334468
Alignment:
Q  175 attctttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||| |||||| |||||||||||||||| |||||||||    
T  39334519 attctttttgagtaaataggcaatta-ccccctgaaattgtaagtttcgtcaa 39334468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 26171677 - 26171720
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  26171677 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 26171720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 47308449 - 47308492
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  47308449 gagtaaatagtcaattatccccttgaaattgtaagtttcgtcaa 47308492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 36870094 - 36870140
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||| |||||| |||||||||||||||| |||||||||    
T  36870094 tttgagtaaatagacaattacccccctgaaattgtaagtttcgtcaa 36870140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 48800518 - 48800472
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||    
T  48800518 tttgagtaaatagtcaattaccctcctgaaattgtaagtttcgtcaa 48800472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 50605323 - 50605278
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||    
T  50605323 ttgagtaaatagtcaattttccccctgaaattgtaagtttcatcaa 50605278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 230
Target Start/End: Complemental strand, 621685 - 621625
Alignment:
Q  170 atgttattctttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaa 230  Q
    |||| ||| ||||||||||||||| |||  | ||||||||||||||| |||||||||||||    
T  621685 atgtgattttttttgagtaaataggcaaaaacccccctgaaattgtagctttcgtcaaaaa 621625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 1862228 - 1862185
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| |||||||||||||||| |||||||||    
T  1862228 tgagtaaatagtcaatta-ccccctgaaattgtaagtttcgtcaa 1862185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 21659246 - 21659294
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||| ||||    
T  21659246 ttttttagtaaatagtcaattttccccctgaaattgtaagtttcttcaa 21659294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 22535192 - 22535240
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||  |||||||||||||||| |||| ||||    
T  22535192 tttttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 22535240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 25706231 - 25706183
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||| |||||| |||||||||| |||||||||||| |||||||||    
T  25706231 tttttgagaaaatagacaattatccctctgaaattgtaagtttcgtcaa 25706183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 30317557 - 30317601
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||    
T  30317557 tgagtaaataggcaattacccccctgaaattgtaagtttcgtcaa 30317601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 34016855 - 34016899
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||||||||    
T  34016855 tgagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaa 34016899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 34733369 - 34733326
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||    
T  34733369 tgagtaaatagtcaattat-cccctgaaattgtaagtttcgtcaa 34733326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 37998881 - 37998837
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  37998881 tgagtaaatagtcaattttccccctgaaattgtaagtttcatcaa 37998837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 47309306 - 47309263
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| |||||||||||||||| |||||||||    
T  47309306 tgagtaaatagtcaatta-ccccctgaaattgtaagtttcgtcaa 47309263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 48614191 - 48614143
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||  |||||||||||||||| |||| ||||    
T  48614191 tttttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 48614143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 1195803 - 1195756
Alignment:
Q  180 ttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||| ||| ||||||||||||| |||| ||||    
T  1195803 ttttgagtaaatagtcaattttcctcctgaaattgtaagtttcatcaa 1195756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 13993723 - 13993769
Alignment:
Q  180 ttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||| ||||||||||||||||| |||| ||||    
T  13993723 ttttgagtaaatagtcaatt-tccccctgaaattgtaagtttcatcaa 13993769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 36077373 - 36077330
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||  |||||||||||||||| |||||||||    
T  36077373 gagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaa 36077330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 50181251 - 50181294
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||    
T  50181251 gagtaaatagtcaattttccccctgaaattgtaagtttcatcaa 50181294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 55979772 - 55979730
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttc 222  Q
    |||| ||||||||||||||||| |||||||||||||||||||||    
T  55979772 ttttcgagtaaatagtcaatta-ccccctgaaattgtaactttc 55979730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 19169289 - 19169335
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||  |||||||||||||||  |||||||||    
T  19169289 tttgagtaaatagtcaatttcccccctgaaattgtaggtttcgtcaa 19169335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 37998028 - 37998074
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||  |||||||||||||||| |||| ||||    
T  37998028 tttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 37998074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 56279764 - 56279809
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||| ||||| |||||||||| |||||||||    
T  56279764 tttgagtaaatagtcaatta-ccccccgaaattgtaagtttcgtcaa 56279809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 217
Target Start/End: Complemental strand, 56444319 - 56444281
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaa 217  Q
    |||||||||||||||||||||| || |||||||||||||    
T  56444319 tttttgagtaaatagtcaattaccctcctgaaattgtaa 56444281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 1566048 - 1566011
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgta 216  Q
    |||||||||||||||||||||  |||||||||||||||    
T  1566048 tttttgagtaaatagtcaatttcccccctgaaattgta 1566011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 1617841 - 1617882
Alignment:
Q  186 gtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||| ||||||||||||||||| |||| ||||    
T  1617841 gtaaatagtcaattttccccctgaaattgtaagtttcatcaa 1617882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 227
Target Start/End: Complemental strand, 6194993 - 6194952
Alignment:
Q  186 gtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||| |||||| |||||||||||||||| |||||||||    
T  6194993 gtaaataggcaattacccccctgaaattgtaagtttcgtcaa 6194952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 6334989 - 6335034
Alignment:
Q  183 tgagtaaatagtcaattatcccc-ctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||    
T  6334989 tgagtaaatagtcaattaccccctctgaaattgtaagtttcgtcaa 6335034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 6335939 - 6335984
Alignment:
Q  183 tgagtaaatagtcaattatcccc-ctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||    
T  6335939 tgagtaaatagtcaattaccccctctgaaattgtaagtttcgtcaa 6335984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 21861214 - 21861258
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||    
T  21861214 ttgagtaaatagtcaatt-tccccctgaaattgtaagtttcatcaa 21861258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 21917077 - 21917121
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||    
T  21917077 ttgagtaaatagtcaatt-tccccctgaaattgtaagtttcatcaa 21917121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 22525377 - 22525333
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||||    
T  22525377 ttgagtaaataggcaattatcccc-tgaaattgtaagtttcgtcaa 22525333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 22731055 - 22731100
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  |||||||||||||||| |||| ||||    
T  22731055 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 22731100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 23591344 - 23591299
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||| |||||| |||||| ||||||||| |||||||||    
T  23591344 ttgagtaaataggcaattacccccctaaaattgtaagtttcgtcaa 23591299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 42987003 - 42987048
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgt 224  Q
    |||| ||||||||||||||||  |||||||||||||||| ||||||    
T  42987003 ttttcgagtaaatagtcaatttcccccctgaaattgtaagtttcgt 42987048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 55082431 - 55082476
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||| || | ||||||||||| |||||||||    
T  55082431 ttgagtaaatagtcaattaccctcttgaaattgtaagtttcgtcaa 55082476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 917772 - 917816
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| | ||||||||||||||| |||| ||||    
T  917772 tgagtaaatagtcaatttttcccctgaaattgtaagtttcatcaa 917816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 1613444 - 1613488
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| || ||||||||||||| |||| ||||    
T  1613444 tgagtaaatagtcaattaccctcctgaaattgtaagtttcttcaa 1613488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 6239222 - 6239174
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||| ||||||  |||||||||||||||| |||| ||||    
T  6239222 tttttgagtaaataatcaatttcccccctgaaattgtaagtttcatcaa 6239174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 6259926 - 6259878
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||| ||||||  |||||||||||||||| |||| ||||    
T  6259926 tttttgagtaaataatcaatttcccccctgaaattgtaagtttcatcaa 6259878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 7971921 - 7971965
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| |||||| || ||||||||||||| |||||||||    
T  7971921 tgagtaaataggcaattaccctcctgaaattgtaagtttcgtcaa 7971965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 15031926 - 15031882
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| |||||| |||||| ||||||||| |||||||||    
T  15031926 tgagtaaataggcaattacccccctaaaattgtaagtttcgtcaa 15031882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 18436386 - 18436430
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||| |||||| ||||||||||||||||| |||| ||||    
T  18436386 tgagtaaataatcaattttccccctgaaattgtaagtttcatcaa 18436430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 19537709 - 19537756
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||| ||||||||||||||| ||| ||||||||||||| |||||||||    
T  19537709 ttttttagtaaatagtcaatt-tcctcctgaaattgtaagtttcgtcaa 19537756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 23162078 - 23162034
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  || ||||||||||||| |||||||||    
T  23162078 tgagtaaatagtcaatttccctcctgaaattgtaagtttcgtcaa 23162034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 23466490 - 23466442
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||| |||||||  |||||||||||||||| |||| ||||    
T  23466490 tttttgagtaaatggtcaatttcccccctgaaattgtaagtttcatcaa 23466442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 230
Target Start/End: Original strand, 27454934 - 27454962
Alignment:
Q  202 ccccctgaaattgtaactttcgtcaaaaa 230  Q
    |||||||||||||||||||||||||||||    
T  27454934 ccccctgaaattgtaactttcgtcaaaaa 27454962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 28256027 - 28255984
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  28256027 tgagtaaatagtcaatt-tccccctgaaattgtaagtttcatcaa 28255984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 32859923 - 32859967
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  32859923 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 32859967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 34018752 - 34018720
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaatt 213  Q
    |||||||||||||||||||| ||||||||||||    
T  34018752 tttgagtaaatagtcaattacccccctgaaatt 34018720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 37687494 - 37687538
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| |||||| |||||||||||||||| |||| ||||    
T  37687494 tgagtaaataggcaattacccccctgaaattgtaagtttcatcaa 37687538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 42260406 - 42260362
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| ||||||||| ||||||||||||| ||| |||||    
T  42260406 tgagtaaataggcaattatcctcctgaaattgtaagttttgtcaa 42260362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 42593677 - 42593629
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||  |||||| ||||||||| |||| ||||    
T  42593677 tttttgagtaaatagtcaatttcccccctaaaattgtaagtttcatcaa 42593629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 50182132 - 50182088
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  50182132 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 50182088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 52647397 - 52647441
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| | ||| ||||||||||| |||||||||    
T  52647397 tgagtaaatagtcaatttttcccttgaaattgtaagtttcgtcaa 52647441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 2e-43; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 179 - 344
Target Start/End: Complemental strand, 35394831 - 35394666
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgag 278  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| |||| |||||||||| ||    
T  35394831 tttttgagtaaatagtcaattaccctcctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccatgaaattgtcaag 35394732  T
Q  279 cagctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    || ||||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  35394731 catctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 35394666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 31286980 - 31286820
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| |||||||| |||||| |||  ||    
T  31286980 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgatattgtcaagcgtct 31286881  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  31286880 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 31286820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 31285469 - 31285630
Alignment:
Q  184 gagtaaatagtcaattatcccc-ctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||| |||  |    
T  31285469 gagtaaatagtcaattaccccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtc 31285568  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  31285569 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 31285630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 184 - 323
Target Start/End: Original strand, 35393163 - 35393302
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||| || ||| ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  35393163 gagtaaatagtcaattaccctcctgaaattgtaactttcgtcaaaaattcccctgaattttgcaaaatgtcaaaaaaccccctgaaattgtcaagcgtct 35393262  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    |||||||| |||||||||| ||| | ||||| ||||||||    
T  35393263 gtcaattatccccctccgttaatttcctccatccaacatg 35393302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 319
Target Start/End: Complemental strand, 29721195 - 29721062
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    |||||||||||||||||| |||| |||||||||||||||| ||||||| ||| ||| ||||||||||| | ||||||  |||||||||||||| |||       
T  29721195 tgagtaaatagtcaattacccccttgaaattgtaactttcttcaaaaa-ccccctgaattttgcaaaacgtcaaaaa--cccctgaaattgtcaagcgtt 29721099  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaa 319  Q
    |||||||||||||||||||| ||| | ||||| ||||    
T  29721098 tgtcaattacccccctccgttaatttcctccatccaa 29721062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 323
Target Start/End: Original strand, 34894195 - 34894334
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||| |  ||| |||||||||||   ||||||  |||||||||||||| | |  |     
T  34894195 gagtaaatagtcaattacccccttgaaattgtagctttcgtcaaaaattctcctgaattttgcaaaacttcaaaaaaacccctgaaattgtcaaacgtca 34894294  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    ||||| ||||||| ||||| ||| | ||||| ||||||||    
T  34894295 gtcaaatacccccatccgttaatttcctccatccaacatg 34894334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 26157272 - 26157362
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgt 274  Q
    ||||||||||||||||  |||||||||||||||| ||| |||||||| |||  || ||||||||||| | |||||| ||||||||||||||    
T  26157272 gagtaaatagtcaattgcccccctgaaattgtaatttttgtcaaaaacccccttgaattttgcaaaacgtcaaaaacccccctgaaattgt 26157362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 29418240 - 29418193
Alignment:
Q  180 ttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||    
T  29418240 ttttgagtaaataggcaattatccccctgaaattgtaagtttcgtcaa 29418193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 19071437 - 19071482
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||    
T  19071437 ttgagtaaatagtcaattttccccctgaaattgtaagtttcgtcaa 19071482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 26928070 - 26928114
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| |||||||||||||||| |||||||||    
T  26928070 tgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 26928114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 18226174 - 18226128
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||    
T  18226174 tttgagtaaatagtcaattttccccctaaaattgtaagtttcgtcaa 18226128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 25143340 - 25143389
Alignment:
Q  180 ttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaa 230  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  25143340 ttttgagtaaattgtcaatta-ccccatgaaattgtaactttcgtcaaaaa 25143389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 14104010 - 14103966
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||    
T  14104010 ttgagtaaatagtcaattat-cccctgaaattgtaagtttcgtcaa 14103966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 14414027 - 14413983
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||    
T  14414027 ttgagtaaatagtcaattat-cccctgaaattgtaagtttcgtcaa 14413983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 23350522 - 23350566
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaa 229  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||    
T  23350522 gagtaaatagtcaatt-tccccctgaaattataactttcgtcaaaa 23350566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 35499459 - 35499406
Alignment:
Q  174 tattctttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||| ||||||||||||||||||||||  || |||||||||||| |||||||||    
T  35499459 tattatttttgagtaaatagtcaattactcctctgaaattgtaagtttcgtcaa 35499406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 12231002 - 12231050
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||| ||||| |||||||||  |||||||||    
T  12231002 tttttgagtaaatagtcaattacccccccgaaattgtaggtttcgtcaa 12231050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 29417150 - 29417194
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||    
T  29417150 tgagtaaataggcaattacccccctgaaattgtaagtttcgtcaa 29417194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 34346060 - 34346016
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| | ||||||||||||||| |||||||||    
T  34346060 tgagtaaatagtcaatttttcccctgaaattgtaagtttcgtcaa 34346016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 202 - 233
Target Start/End: Complemental strand, 3987353 - 3987322
Alignment:
Q  202 ccccctgaaattgtaactttcgtcaaaaatcc 233  Q
    ||||||||||||||||||||||||||||||||    
T  3987353 ccccctgaaattgtaactttcgtcaaaaatcc 3987322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 5852388 - 5852431
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||| ||||||||||| ||||||||||| |||||||||    
T  5852388 gagtaaataggcaattatccccttgaaattgtaagtttcgtcaa 5852431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 17774288 - 17774331
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||| |||||| |||||||||||||||| |||||||||    
T  17774288 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaa 17774331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 19488575 - 19488618
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttc 222  Q
    ||||||||||||||||||||| |||||| |||||||||| ||||    
T  19488575 tttttgagtaaatagtcaattttcccccagaaattgtaagtttc 19488618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 21125750 - 21125707
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||| |||||| |||||||||||||||| |||||||||    
T  21125750 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaa 21125707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 23351726 - 23351660
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaa 250  Q
    |||||||||||||||||| |||| |||||||||||||||||| ||||| |||  |  |||||||||||    
T  23351726 tgagtaaatagtcaatta-ccccttgaaattgtaactttcgttaaaaacccccttaaattttgcaaaa 23351660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 30022456 - 30022499
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||||  |||||||||||| |||||||||    
T  30022456 gagtaaatagtcaattatccatctgaaattgtaagtttcgtcaa 30022499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 33227667 - 33227710
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||  |||||||||||||||||||||| |||||||||    
T  33227667 gagtaaataggaaattatccccctgaaattgtaagtttcgtcaa 33227710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 18829060 - 18829105
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||| |||||||||||| |||||||||| |||||||||    
T  18829060 tttgagtaaataggcaattatccccc-gaaattgtaagtttcgtcaa 18829105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 28294240 - 28294282
Alignment:
Q  185 agtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||  |||||||||||||||| |||||||||    
T  28294240 agtaaatagtcaatttcccccctgaaattgtaagtttcgtcaa 28294282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 46101007 - 46100961
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||  |||||||||||||||| |||| ||||    
T  46101007 tttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 46100961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 5668243 - 5668288
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  |||||||||||||||| |||| ||||    
T  5668243 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 5668288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 34345218 - 34345263
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  |||||||||||||||  |||||||||    
T  34345218 ttgagtaaatagtcaatttcccccctgaaattgtaggtttcgtcaa 34345263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 40260702 - 40260657
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||| ||| | ||||||||||||||| |||||||||    
T  40260702 ttgagtaaatagtccatttttcccctgaaattgtaagtttcgtcaa 40260657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 44378790 - 44378832
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||    
T  44378790 tgagtaaatagtcaatta--cccctgaaattgtaagtttcgtcaa 44378832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 44387657 - 44387699
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||    
T  44387657 tgagtaaatagtcaatta--cccctgaaattgtaagtttcgtcaa 44387699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 46230307 - 46230262
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  |||||||||||||||| |||| ||||    
T  46230307 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 46230262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 3627935 - 3627979
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  3627935 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 3627979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 7337160 - 7337196
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaa 217  Q
    |||||||||||||||||||  ||||||||||||||||    
T  7337160 tttgagtaaatagtcaatttcccccctgaaattgtaa 7337196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 7463058 - 7463014
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| | ||||||||||||||| |||| ||||    
T  7463058 tgagtaaatagtcaatttttcccctgaaattgtaagtttcatcaa 7463014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 10464083 - 10464040
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  10464083 tgagtaaatagtcaatt-tccccctgaaattgtaagtttcatcaa 10464040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 11455416 - 11455460
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| |||||| || ||||||||||||| |||||||||    
T  11455416 tgagtaaataggcaattaccctcctgaaattgtaagtttcgtcaa 11455460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 24212304 - 24212348
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| ||||| || |||||||||||||| |||||||||    
T  24212304 tgagtaaataggcaattgtctccctgaaattgtaagtttcgtcaa 24212348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 28312630 - 28312586
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| | ||||||||||||||  |||||||||    
T  28312630 tgagtaaatagtcaatttttcccctgaaattgtaggtttcgtcaa 28312586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 36644032 - 36644075
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  36644032 tgagtaaatagtcaatt-tccccctgaaattgtaagtttcatcaa 36644075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 38170900 - 38170944
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  38170900 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 38170944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 41080261 - 41080305
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  41080261 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 41080305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 41408868 - 41408915
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||| |||||||||||||||| ||||||||||||||||| |||| ||||    
T  41408868 ttttagagtaaatagtcaatt-tccccctgaaattgtaagtttcatcaa 41408915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 41409693 - 41409649
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||| ||||||||| |||| ||||    
T  41409693 tgagtaaatagtcaattttccccctaaaattgtaagtttcatcaa 41409649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 43082163 - 43082206
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  43082163 tgagtaaatagtcaatt-tccccctgaaattgtaagtttcatcaa 43082206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 44388516 - 44388468
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||| |||||||||||||||| |||| || ||||||||| |||||||||    
T  44388516 ttttcgagtaaatagtcaattttccctctaaaattgtaagtttcgtcaa 44388468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 45258918 - 45258961
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||    
T  45258918 tgagtaaataggcaatta-ccccctgaaattgtaagtttcgtcaa 45258961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 47171068 - 47171024
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  47171068 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 47171024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 7e-43; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 49726101 - 49725941
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||| |||||| |||||||||||||||||||||| |||  ||    
T  49726101 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaatccccctgaaattgtcaagcgtct 49726002  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  49726001 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 49725941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 52946366 - 52946526
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  52946366 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 52946465  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  52946466 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 52946526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 1137724 - 1137563
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||| ||| ||| ||||||||||||| |||||  ||||||||||||||| |||  |    
T  1137724 tgagtaaatagtcaattacccccttgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaccccccctgaaattgtcaagcgtc 1137625  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||||||||||||||||||| ||| | ||||| |||||||| ||||||  ||||| ||||||    
T  1137624 tgtcaattacccccctccgttaatttcctccatccaacatgctaatgtggccgttaactgcc 1137563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 52118378 - 52118218
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||  || ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  52118378 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 52118279  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  52118278 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 52118218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 1136240 - 1136400
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| |||||||||||||||  ||  ||    
T  1136240 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcacgcgtct 1136339  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||| ||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  1136340 gtcaattaccctcctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 1136400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 11032386 - 11032526
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||| ||| ||| |||||| |||||| |||||| ||||||||||||||| |||  |    
T  11032386 tgagtaaatagtcaattacccccctgaaattttaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaacccccctgaaattgtcaagcgtc 11032485  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    |||||||||||||||||||| ||| | ||||| ||||||||    
T  11032486 tgtcaattacccccctccgttaatttcctccatccaacatg 11032526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 52947901 - 52947742
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||| ||||||| |||||| ||||||||||||||| |||  ||    
T  52947901 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccctctgaattttacaaaatgtcaaaaa-ccccctgaaattgtcaagcgtct 52947803  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  52947802 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 52947742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 34649874 - 34650035
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    |||||||||||||||||| |||| |||||||||||||||||| |||||  || ||| ||||||||||||| |||||||| ||||||||||||| |||  |    
T  34649874 tgagtaaatagtcaattacccccttgaaattgtaactttcgtaaaaaactcccctgaattttgcaaaatgtcaaaaatctccctgaaattgtcaagcgtc 34649973  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||| |||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  34649974 tgtcaattatccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 34650035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 34651496 - 34651336
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| | ||||||||||||||||||  ||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||| ||   ||    
T  34651496 gagtaaatagtcaattacctccctgaaattgtaacttttatcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagtttct 34651397  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| |||| || |||||||| | ||||  ||||| ||||||    
T  34651396 gtcaattacccccctccgttaattttcttcatccaacatgctgatgtggccgttaactgcc 34651336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 40954645 - 40954805
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaat-cccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||  ||| ||| ||||||||||||| |||||| ||||||||||||||| |||  |    
T  40954645 gagtaaatagtcaattatcccc-tgaaattgtaacttttgtcaaaaaaaccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtc 40954743  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||||||||||||||||||| ||| | | ||| |||||||| | ||||  ||||| ||||||    
T  40954744 tgtcaattacccccctccgttaatttccaccatccaacatgctgatgtggccgttaactgcc 40954805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 184 - 320
Target Start/End: Complemental strand, 11033877 - 11033741
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||  || ||| |||||| |||||| ||||||  |||||||||||||| |||  ||    
T  11033877 gagtaaatagtcaattacccccttgaaattgtaactttcgtcaaaaaatcccctgaattttgtaaaatgtcaaaaaaacccctgaaattgtcaagcgtct 11033778  T
Q  284 gtcaattacccccctccgtgaatattctccagccaac 320  Q
    ||||||||||||||||||| ||| | ||||| |||||    
T  11033777 gtcaattacccccctccgttaatttcctccatccaac 11033741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 51149966 - 51150077
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| ||| ||||||||||| |||  ||    
T  51149966 gagtaaatagtcaatta-ccccctgaaattgtaactttcgtcaaaaacccctctgaattttgcaaaatgtcaaaaacccctctgaaattgtcaagcgtct 51150064  T
Q  284 gtcaattaccccc 296  Q
    |||||||||||||    
T  51150065 gtcaattaccccc 51150077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 179 - 344
Target Start/End: Original strand, 49964673 - 49964839
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgag 278  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||| | |||||  ||| || |||||||| ||    
T  49964673 ttttagagtaaatagtcaattatccccctgaaattgtaactttcgttaaaaaaccccctgaattttgcaaaacgtcaaaaccccctctaaaattgtcaag 49964772  T
Q  279 cagctgtcaattac-ccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |  ||||||||||| ||||||| || ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  49964773 cgtctgtcaattactccccctctgttaatttcctccatccaacatgctgatgtggccgttaactgcc 49964839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 25580785 - 25580943
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    |||||||| ||||||||||  | |||||||||||||||||||||||||  |  || ||||||||||| | |||||  ||||||||||||||| |||  ||    
T  25580785 gagtaaatggtcaattatcttc-tgaaattgtaactttcgtcaaaaatttccttgaattttgcaaaacgtcaaaac-ccccctgaaattgtcaagcgtct 25580882  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  25580883 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 25580943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 32610819 - 32610956
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    |||||||||||||| || | |||| ||||||||| |||||||||||| | | ||| ||||||||||| | ||||||  ||| ||||||| || |||  ||    
T  32610819 gagtaaatagtcaactacctccctaaaattgtaattttcgtcaaaaacctccctgaattttgcaaaacgtcaaaaactcccatgaaattttcaagcgtct 32610918  T
Q  284 gtcaattacccccctccgtgaatattctccagccaaca 321  Q
    ||||||||||| ||||||| ||| | ||||| ||||||    
T  32610919 gtcaattaccctcctccgttaatttcctccatccaaca 32610956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 49724626 - 49724680
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactg 238  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||| |||||||    
T  49724626 gagtaaatagtcaattacccccctgaaattgtaattttcgtcaaaaaccccactg 49724680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 296
Target Start/End: Complemental strand, 25582535 - 25582422
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccac-tgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    ||||||||| ||||||| |||||| | |||||||||||| |||||||    || || ||||||||||| | |||||| ||||||||||||||| |||  |    
T  25582535 gagtaaataatcaattacccccctaatattgtaactttcttcaaaaaaaaaacctgaattttgcaaaacgtcaaaaacccccctgaaattgtcaagcgtc 25582436  T
Q  283 tgtcaattaccccc 296  Q
    ||||||||||||||    
T  25582435 tgtcaattaccccc 25582422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 52116910 - 52116956
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaa 230  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||    
T  52116910 gagtaaattgtcaattacccccctgaaattgtaactttcgtcaaaaa 52116956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 11652851 - 11652895
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||    
T  11652851 tgagtaaatagacaattatccccctgaaattgtaagtttcgtcaa 11652895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 40066679 - 40066635
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| |||||||||||||||| |||||||||    
T  40066679 tgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 40066635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 275
Target Start/End: Original strand, 43640785 - 43640877
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtc 275  Q
    |||||||||||||||||| ||| || |||||||| |||||||||||||  || ||| |||||||||||   ||||||   |||||||||||||    
T  43640785 tgagtaaatagtcaattaccccactaaaattgtagctttcgtcaaaaaaacccctgaattttgcaaaacttcaaaaagaaccctgaaattgtc 43640877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 43643903 - 43643835
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaa 250  Q
    ||||||||||| ||||||| ||| ||||||||||| |||| |||||||||||  ||| |||||||||||    
T  43643903 ttgagtaaataatcaattacccctctgaaattgtagcttttgtcaaaaatcctcctgaattttgcaaaa 43643835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 20820350 - 20820307
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  20820350 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 20820307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 35234839 - 35234882
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  35234839 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 35234882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 46651265 - 46651222
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  46651265 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 46651222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 275
Target Start/End: Original strand, 55455882 - 55455972
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtc 275  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||||   ||  || |||||||||||   |||||| |||||||||||||||    
T  55455882 gagtaaatagtcaattacccccctgaaattgtagctttcgccaaaatctcccttgaattttgcaaaacttcaaaaa-ccccctgaaattgtc 55455972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 25360429 - 25360383
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||| |||||||||| |||||||||||| |||||||||    
T  25360429 tttgagtaaataggcaattatccctctgaaattgtaagtttcgtcaa 25360383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 50837476 - 50837577
Alignment:
Q  200 atccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagctgtcaattacccccctc 299  Q
    ||||||||||||||||||||||||||||||| ||| |||  ||||  |||||  |||||| ||||||||||||| | | |    ||||||||||||||||    
T  50837476 atccccctgaaattgtaactttcgtcaaaaacccccctgatttttagaaaatttcaaaaa-ccccctgaaattgacaaacgttagtcaattacccccctc 50837574  T
Q  300 cgt 302  Q
    |||    
T  50837575 cgt 50837577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 54627020 - 54627066
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||| ||| |||||||||||| |||||||||    
T  54627020 tttgagtaaatagtcaattacccctctgaaattgtaagtttcgtcaa 54627066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 9104090 - 9104046
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||    
T  9104090 ttgagtaaatagtcaatta-ccccctgaaattgtaagtttcgtcaa 9104046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 14509170 - 14509215
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||| ||||| |||||||||| |||||||||    
T  14509170 ttgagtaaatagtcaattacccccccgaaattgtaagtttcgtcaa 14509215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 17754952 - 17754907
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||||    
T  17754952 ttgagtaaatagtcaattttccccatgaaattgtaagtttcgtcaa 17754907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 19056272 - 19056227
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||||    
T  19056272 ttgagtaaatagtcaattttccccatgaaattgtaagtttcgtcaa 19056227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 40279282 - 40279225
Alignment:
Q  170 atgttattctttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||| ||| |||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  40279282 atgtaattttttttgagtaaatagtcaatttcccccttgaaattgtaagtttcgtcaa 40279225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 45969312 - 45969361
Alignment:
Q  178 ctttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||||||  |||||||||||||||| ||| |||||    
T  45969312 ctttttgagtaaatagtcaatttcccccctgaaattgtaagttttgtcaa 45969361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 3938357 - 3938313
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||||||||    
T  3938357 tgagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaa 3938313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 10657253 - 10657209
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||||||||    
T  10657253 tgagtaaatagtcaatttcccccctgaaattgtaagtttcgtcaa 10657209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 13341593 - 13341637
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  13341593 tgagtaaatagtcaattttccccctgaaattgtaagtttcatcaa 13341637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 23781858 - 23781810
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||  |||||||||||||||| |||| ||||    
T  23781858 tttttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 23781810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 31585383 - 31585335
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||| |||||| |||| ||||||||||| |||||||||    
T  31585383 tttttgagtaaataggcaattacccccttgaaattgtaagtttcgtcaa 31585335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 32612456 - 32612389
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaa 250  Q
    ||||||||||||||||||| |||||||||||||||||||| || |||||  |  ||| |||||||||||    
T  32612456 ttgagtaaatagtcaatta-ccccctgaaattgtaacttttgtaaaaaaaactcctgaattttgcaaaa 32612389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 36026968 - 36027012
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||    
T  36026968 tgagtaaataggcaattacccccctgaaattgtaagtttcgtcaa 36027012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 38599746 - 38599706
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttc 222  Q
    |||||||||||||||||| ||||||||||||||||| ||||    
T  38599746 ttgagtaaatagtcaattttccccctgaaattgtaagtttc 38599706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 44518252 - 44518296
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  44518252 tgagtaaatagtcaattttccccctgaaattgtaagtttcatcaa 44518296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 47470741 - 47470773
Alignment:
Q  202 ccccctgaaattgtaactttcgtcaaaaatccc 234  Q
    |||||||||||||||||||||||||||||||||    
T  47470741 ccccctgaaattgtaactttcgtcaaaaatccc 47470773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 344
Target Start/End: Original strand, 52116952 - 52117040
Alignment:
Q  256 aaaatccccctgaaattgtcgagcagctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||| |||||| |||||||| |||  ||||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  52116952 aaaaaccccctaaaattgtcaagcgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 52117040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 1033927 - 1033884
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||| |||||| |||||||||||||||| |||||||||    
T  1033927 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaa 1033884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 2445335 - 2445292
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||| |||||||| |||||||||||||| |||||||||    
T  2445335 gagtaaataggcaattatctccctgaaattgtaagtttcgtcaa 2445292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 6757049 - 6757006
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||| |||||| |||||||||||||||| |||||||||    
T  6757049 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaa 6757006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 27656381 - 27656338
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||| |||| |||||||||||| |||||||||    
T  27656381 gagtaaatagtcaattttccctctgaaattgtaagtttcgtcaa 27656338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 47768098 - 47768141
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||    
T  47768098 gagtaaatagtcaattttccccctgaaattgtaagtttcatcaa 47768141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 49316895 - 49316852
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||| |||||| ||||||||||||||||| |||||||||    
T  49316895 gagtaaataatcaattttccccctgaaattgtaagtttcgtcaa 49316852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 1577645 - 1577599
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaa 230  Q
    ||||||||||||||  | ||||||||||||||| |||||||||||||    
T  1577645 gagtaaatagtcaaaaacccccctgaaattgtagctttcgtcaaaaa 1577599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 23323204 - 23323250
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||| |||||||||||||| ||||||||||||||||| |||| ||||    
T  23323204 tttgggtaaatagtcaattttccccctgaaattgtaagtttcatcaa 23323250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 254 - 344
Target Start/End: Original strand, 49724667 - 49724757
Alignment:
Q  254 caaaaatccccctgaaattgtcgagcagctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||||| ||| ||||||||||| |||  |||||||||| |||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  49724667 caaaaaccccactgaaattgtcaagcgtctgtcaattatccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 49724757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 230
Target Start/End: Complemental strand, 50838378 - 50838348
Alignment:
Q  200 atccccctgaaattgtaactttcgtcaaaaa 230  Q
    |||||||||||||||||||||||||||||||    
T  50838378 atccccctgaaattgtaactttcgtcaaaaa 50838348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 54602156 - 54602201
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||||| ||||||||| ||||| |||||||||    
T  54602156 tttgagtaaatagtcaattat-cccctgaaactgtaagtttcgtcaa 54602201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 4490492 - 4490448
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||    
T  4490492 ttgagtaaatagtcaatta-cctcctgaaattgtaactttagtcaa 4490448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 13342475 - 13342430
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  |||||||||||||||| |||| ||||    
T  13342475 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 13342430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 25067540 - 25067585
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| ||||| ||||||||||| |||| ||||    
T  25067540 ttgagtaaatagtcaattttccccttgaaattgtaagtttcatcaa 25067585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 33980407 - 33980452
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  |||||||||||| ||| |||||||||    
T  33980407 ttgagtaaatagtcaatttcccccctgaaattataagtttcgtcaa 33980452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 36791852 - 36791807
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  |||||||||||||||| |||| ||||    
T  36791852 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 36791807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 3370884 - 3370840
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  3370884 tgagtaaatagtcaatttcccccctgaaattgtaaatttcatcaa 3370840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 5152372 - 5152415
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  5152372 tgagtaaatagtcaatt-tccccctgaaattgtaagtttcatcaa 5152415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 6756753 - 6756713
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgt 224  Q
    |||||||||| |||||| |||||||||||||||| ||||||    
T  6756753 gagtaaataggcaattacccccctgaaattgtaagtttcgt 6756713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 10435412 - 10435456
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  10435412 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 10435456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 20411318 - 20411271
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||| |||||||||||||||||| ||||||||||| ||| |||||||||    
T  20411318 ttttagagtaaatagtcaattat-cccctgaaattataagtttcgtcaa 20411271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 21577373 - 21577329
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||| ||||||||||| |||||||||    
T  21577373 tgagtaaatagtcaatttcccccatgaaattgtaagtttcgtcaa 21577329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 29006552 - 29006596
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  29006552 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 29006596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 29587097 - 29587141
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| |||||| || ||||||||||||| |||||||||    
T  29587097 tgagtaaataggcaattaccctcctgaaattgtaagtttcgtcaa 29587141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 32951104 - 32951060
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  32951104 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 32951060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 34503731 - 34503687
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| |||||| |||||||||||| ||| |||||||||    
T  34503731 tgagtaaatagacaattacccccctgaaattttaagtttcgtcaa 34503687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 35154769 - 35154725
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  35154769 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 35154725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 40163033 - 40163081
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||| ||||||||||||||||  |||||||||||||||| |||| ||||    
T  40163033 ttttcgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 40163081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 45149918 - 45149874
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||| |||| ||| ||||||||||||| |||||||||    
T  45149918 tgagtaaatagttaattttcctcctgaaattgtaagtttcgtcaa 45149874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 50672714 - 50672670
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| ||||||||| | ||||||||||| |||||||||    
T  50672714 tgagtaaataggcaattatcctcttgaaattgtaagtttcgtcaa 50672670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 52960942 - 52960986
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  52960942 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 52960986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 52961773 - 52961725
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||||| ||| ||| ||||||||| |||| ||||    
T  52961773 tttttgagtaaatagtcaattttcctcctaaaattgtaagtttcatcaa 52961725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 230
Target Start/End: Original strand, 54560051 - 54560079
Alignment:
Q  202 ccccctgaaattgtaactttcgtcaaaaa 230  Q
    |||||||||||||||||||||||||||||    
T  54560051 ccccctgaaattgtaactttcgtcaaaaa 54560079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 1e-41; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 19897390 - 19897552
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcag 281  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||| |||||| |||||| ||||||||||||||| |||      
T  19897390 ttgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaacccccctgaaattgtcaagcgt 19897489  T
Q  282 ctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  19897490 ctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 19897552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 38559569 - 38559731
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcag 281  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||  || ||| ||||||||||||| |||||| ||||||||||||||| ||||     
T  38559569 ttgagtaaatagtcgattacccccctgaaattgtaactttcgtcaaaaactcccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcat 38559668  T
Q  282 ctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  38559669 ctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 38559731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 17640351 - 17640513
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcag 281  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||| | |||||| |||||| ||||||||||||||| |||      
T  17640351 ttgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaatccccctgaatttggtaaaatgtcaaaaacccccctgaaattgtcaagcgt 17640450  T
Q  282 ctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||||| ||| | || || |||||||| | ||||  ||||| ||||||    
T  17640451 ctgtcaattacccccctccgttaatttccttcatccaacatgctgatgtggccgttaactgcc 17640513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 43492883 - 43492723
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||  ||| ||| |||||||||||   |||||||||||||||||||||| |||  ||    
T  43492883 gagtaaatggtcaattacccccctgaaattgtaactttcgtcaaaaccccccctgaattttgcaaaacatcaaaaatccccctgaaattgtcaagcgtct 43492784  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | ||||| |||||||||| ||||  ||||| ||||||    
T  43492783 gtcaattacccccctccgttaatttcctccatccaacatgttgatgtggccgttaactgcc 43492723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 184 - 321
Target Start/End: Original strand, 34088576 - 34088711
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  34088576 gagtaaatagtcaatta-ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaa-ccccctgaaattgtcaagcgtct 34088673  T
Q  284 gtcaattacccccctccgtgaatattctccagccaaca 321  Q
    ||||||||||||||||||| ||| | ||||| ||||||    
T  34088674 gtcaattacccccctccgttaatttcctccatccaaca 34088711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 34090064 - 34089905
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| || ||| ||||||||||||| |||||| ||| ||||||||||| |||  ||    
T  34090064 gagtaaatagtcaatta-ccccctgaaattgtaactttcgtcaaaaattcctctgaattttgcaaaatgtcaaaaacccctctgaaattgtcaagcgtct 34089966  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||||||| |||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  34089965 gtcaattatccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 34089905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 38561256 - 38561118
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||| |||  |    
T  38561256 tgagtaaatagtcaatta-ccccctgaaattgtaactttcgtcaaaaacccctctgaattttgcaaaatgtcaaaaaaccccctgaaattgtcaagcgtc 38561158  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    |||||||||| ||||||||| ||| | ||||| ||||||||    
T  38561157 tgtcaattac-cccctccgttaatttcctccatccaacatg 38561118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 181 - 323
Target Start/End: Complemental strand, 23094856 - 23094714
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagca 280  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||  ||| ||||||||||||| |||||| ||||||||||||||| |||     
T  23094856 tttgagtaaatagtcaattacccccttgaaattgtaactttcgtcaaaaaacctcctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcg 23094757  T
Q  281 gctgtcaattacccccctccgtgaatattctccagccaacatg 323  Q
      ||||||||| |||||||||| ||| | ||||| ||||||||    
T  23094756 tatgtcaattatccccctccgttaatttcctccatccaacatg 23094714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 184 - 323
Target Start/End: Original strand, 1301227 - 1301364
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| ||| ||| ||||||||||||| |||||||  ||||||||||||| |||  ||    
T  1301227 gagtaaatagtcaattatccccttgaaattgtaacttttgtcaaaaacccccctgaattttgcaaaatgtcaaaaat--ccctgaaattgtcaagcgtct 1301324  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    ||||||||||||||||||| ||| |  |||| ||||||||    
T  1301325 gtcaattacccccctccgttaatttcatccatccaacatg 1301364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 323
Target Start/End: Complemental strand, 1302902 - 1302765
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||  |||||| |||||| |||||||||||||||||||||| |||  ||    
T  1302902 gagtaaatagtcaatta-ccctctgaaattgtaactttcgtcaaaaatccccctaaattttgtaaaatgtcaaaaatccccctgaaattgtcaagcgtct 1302804  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    ||||||||| ||||||||| ||| | ||||| ||||||||    
T  1302803 gtcaattac-cccctccgttaatttcctccatccaacatg 1302765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 26626686 - 26626524
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaa-atccccctgaaattgtcgagcag 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  || ||| |||||| |||| | |||||   ||||||||||||||| |||      
T  26626686 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaactcccctgaattttgtaaaacgtcaaaacccccccctgaaattgtcaagcgt 26626587  T
Q  282 ctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||| ||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  26626586 ctgtcaattacgcccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 26626524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 19898920 - 19898760
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| |||||| ||||||||||||| |||||||| ||| ||| ||||||||||||| ||||   ||||| ||||||||| |||  |     
T  19898920 gagtaaatagtcaattacccccctaaaattgtaacttttgtcaaaaacccccctgaattttgcaaaatgtcaaacccccccccgaaattgtcaagcgtcg 19898821  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  19898820 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 19898760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 17641830 - 17641744
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaa 270  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||    
T  17641830 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaa 17641744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 34384972 - 34385135
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccc-tgaaattgtcgagca 280  Q
    ||||||||||||||||||   ||||||||||||||| |||||||||||| |||  || ||||||||||| | |||||| ||||| |||||||||| |||     
T  34384972 ttgagtaaatagtcaattgctcccctgaaattgtaattttcgtcaaaaaaccccttgaattttgcaaaacgtcaaaaaccccccttgaaattgtcaagcg 34385071  T
Q  281 gctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
     ||||||||||||| |||| || ||| | ||| | |||||||| | ||||  ||||| ||||||    
T  34385072 tctgtcaattaccctcctctgttaatttcctctatccaacatgctgatgtggccgttaactgcc 34385135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 34386574 - 34386414
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    |||||||||| | ||||| |||| |||||||||||||||||| ||||| | |  || ||||||||||| | ||||||| ||| | ||||| || |||  |    
T  34386574 tgagtaaataattaatta-ccccttgaaattgtaactttcgttaaaaaactctttgaattttgcaaaacgtcaaaaattcccttaaaattatcaagcgtc 34386476  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||||||||||||||||||| ||| | ||||| |||||||||| ||||  ||||| ||||||    
T  34386475 tgtcaattacccccctccgttaatttcctccatccaacatgttgatgtggccgttaactgcc 34386414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 296
Target Start/End: Original strand, 43492543 - 43492654
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||| |||     ||||||||||| | | |||| ||||||||||||||| |||  ||    
T  43492543 gagtaaatagtcaattacctccctgaaattgtaactttcgtcaaaaaccccttgaaattttgcaaaacgtc-aaaacccccctgaaattgtcaagcgtct 43492641  T
Q  284 gtcaattaccccc 296  Q
    |||||||||||||    
T  43492642 gtcaattaccccc 43492654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 323
Target Start/End: Original strand, 26625042 - 26625179
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaa-atccccctgaaattgtcgagcagc 282  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||| ||  ||| ||||||||||| | ||||| ||  || |||||||||| |||  |    
T  26625042 gagtaaatagtcaatta-ccccctgaaattgtaactttcgtaaaaaaccctcctgaattttgcaaaacgtcaaaacat--ccttgaaattgtcaagcgtc 26625138  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    |||||||||||| | ||||| ||| | ||||| ||||||||    
T  26625139 tgtcaattaccctcatccgttaatttcctccatccaacatg 26625179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 23093239 - 23093285
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaa 230  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  23093239 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaa 23093285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 17647276 - 17647324
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  17647276 tttttgagtaaatagtcaattatccccttgaaattgtaagtttcgtcaa 17647324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 323
Target Start/End: Complemental strand, 19877769 - 19877629
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagca 280  Q
    |||||||||||||||||||| || ||| |||||| ||||||||||||||  |||| || |||||||||||   | |||| ||||||||||||||  |||     
T  19877769 tttgagtaaatagtcaattaccctcctaaaattgcaactttcgtcaaaatccccattgaattttgcaaaacttc-aaaacccccctgaaattgttaagcg 19877671  T
Q  281 gctgtcaattacccccctccgtgaatattctccagccaacatg 323  Q
     ||| |||||| | |||||||| ||| | ||||| ||||||||    
T  19877670 cctgccaatta-ctccctccgtcaatttcctccatccaacatg 19877629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 5573962 - 5574006
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||| |||||||||||| |||||||||    
T  5573962 tgagtaaatagtcaattatccctctgaaattgtaagtttcgtcaa 5574006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 330
Target Start/End: Original strand, 23093280 - 23093356
Alignment:
Q  254 caaaaatccccctgaaattgtcgagcagctgtcaattacccccctccgtgaatattctccagccaacatgttaatgt 330  Q
    |||||| ||||||||||||||| |||  |||||||||| |||||||||| ||| | ||||| |||||||||| ||||    
T  23093280 caaaaaaccccctgaaattgtcaagcgtctgtcaattatccccctccgttaatttcctccatccaacatgttgatgt 23093356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 27500181 - 27500225
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtca 226  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||    
T  27500181 ttgagtaaatagtcaattttccccctgaaattgtaagtttcgtca 27500225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 3508933 - 3508886
Alignment:
Q  180 ttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||| ||||||||||||||||| |||| ||||    
T  3508933 ttttgagtaaatagtcaattttccccctgaaattgtaagtttcatcaa 3508886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 41084209 - 41084252
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  41084209 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 41084252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 41210343 - 41210300
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  41210343 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 41210300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 639857 - 639903
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaa 230  Q
    ||||||||||||||||| || || |||||||||||||||||||||||    
T  639857 gagtaaatagtcaattaccctcccgaaattgtaactttcgtcaaaaa 639903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 26359968 - 26359924
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||    
T  26359968 ttgagtaaatagtcaatta-ccccctgaaattgtaattttcgtcaa 26359924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 4992892 - 4992936
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||    
T  4992892 tgagtaaatagtcaattacccctctgaaattgtaagtttcgtcaa 4992936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 12403554 - 12403602
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||  |||||||||||||||| |||| ||||    
T  12403554 tttttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 12403602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 36429300 - 36429332
Alignment:
Q  202 ccccctgaaattgtaactttcgtcaaaaatccc 234  Q
    |||||||||||||||||||||||||||||||||    
T  36429300 ccccctgaaattgtaactttcgtcaaaaatccc 36429332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 729327 - 729369
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||| ||||||||||||||||| |||||||||    
T  729327 gagtaaatagtcaatt-tccccctgaaattgtaagtttcgtcaa 729369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 1144492 - 1144449
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||| || |||||||||||||||| |||||||||    
T  1144492 gagtaaatagtcaactacccccctgaaattgtaagtttcgtcaa 1144449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 5382504 - 5382461
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||    
T  5382504 gagtaaatagacaattttccccctgaaattgtaagtttcgtcaa 5382461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 5575152 - 5575109
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  ||||||||||||||| |||||||||    
T  5575152 gagtaaatagtcaattactcccctgaaattgtaagtttcgtcaa 5575109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 9587508 - 9587551
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||| |||||| |||||||||||||||| |||||||||    
T  9587508 gagtaaatagacaattacccccctgaaattgtaagtttcgtcaa 9587551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 17526939 - 17526892
Alignment:
Q  180 ttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||||  |||||||||||||||| |||| ||||    
T  17526939 ttttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 17526892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 38977559 - 38977601
Alignment:
Q  185 agtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||    
T  38977559 agtaaataggcaattatccccctgaaattgtaagtttcatcaa 38977601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 39760566 - 39760612
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||  |||||||||||||||| |||| ||||    
T  39760566 tttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 39760612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 5348644 - 5348595
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaa 230  Q
    ||||||||||||| |||  | ||||||||||||||| |||||||||||||    
T  5348644 tttgagtaaataggcaaaaacccccctgaaattgtagctttcgtcaaaaa 5348595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 11445940 - 11445895
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  |||||||||||||||| |||| ||||    
T  11445940 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 11445895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 12737156 - 12737111
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| | ||||||||||||||| |||| ||||    
T  12737156 ttgagtaaatagtcaatttttcccctgaaattgtaagtttcatcaa 12737111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 12799979 - 12799934
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| | ||||||||||||||| |||| ||||    
T  12799979 ttgagtaaatagtcaatttttcccctgaaattgtaagtttcatcaa 12799934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 19292225 - 19292270
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||| |||||| ||| |||||||||||| |||||||||    
T  19292225 ttgagtaaatagacaattacccctctgaaattgtaagtttcgtcaa 19292270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 21639909 - 21639954
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  |||||||||||||||| |||| ||||    
T  21639909 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 21639954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 36811674 - 36811629
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| ||| ||||||||||||| |||| ||||    
T  36811674 ttgagtaaatagtcaattttcctcctgaaattgtaagtttcatcaa 36811629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 38396256 - 38396215
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttc 222  Q
    |||||||||||||||||||  |||||||||||||||| ||||    
T  38396256 tttgagtaaatagtcaatttcccccctgaaattgtaagtttc 38396215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 459468 - 459512
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  459468 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 459512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 970431 - 970475
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  970431 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 970475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 4299801 - 4299757
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  4299801 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 4299757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 5790623 - 5790579
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| |||||| || ||||||||||||| |||||||||    
T  5790623 tgagtaaatagacaattaccctcctgaaattgtaagtttcgtcaa 5790579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 6681370 - 6681326
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  6681370 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 6681326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 6865480 - 6865436
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| ||||||||||| | ||||||||| |||||||||    
T  6865480 tgagtaaataggcaattatccccttaaaattgtaagtttcgtcaa 6865436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 8408263 - 8408219
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  8408263 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 8408219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 8506116 - 8506073
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| || |||||||||||||| |||||||||    
T  8506116 tgagtaaatagtcaatt-tctccctgaaattgtaagtttcgtcaa 8506073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 17526055 - 17526099
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  17526055 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 17526099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 21632534 - 21632490
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  21632534 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 21632490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 21640781 - 21640737
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  21640781 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 21640737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 22613677 - 22613633
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  22613677 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 22613633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 24325218 - 24325175
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  24325218 tgagtaaatagtcaatt-tccccctgaaattgtaagtttcatcaa 24325175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 24361843 - 24361800
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  24361843 tgagtaaatagtcaatt-tccccctgaaattgtaagtttcatcaa 24361800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 33159962 - 33159918
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  || ||||||||||||| |||||||||    
T  33159962 tgagtaaatagtcaatttccctcctgaaattgtaagtttcgtcaa 33159918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 38091514 - 38091470
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||| | ||||||||||| |||||||||    
T  38091514 tgagtaaatagtcaattttcctcatgaaattgtaagtttcgtcaa 38091470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 38395376 - 38395424
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||  |||| ||||||||||| |||| ||||    
T  38395376 tttttgagtaaatagtcaatttcccccttgaaattgtaagtttcatcaa 38395424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 39761453 - 39761405
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||| ||||||||||||||||  |||||||||||||||| |||| ||||    
T  39761453 ttttggagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 39761405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 42342002 - 42341958
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||| ||||||||||||| |||| ||||    
T  42342002 tgagtaaatagtcaattttcctcctgaaattgtaagtttcatcaa 42341958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 43067514 - 43067558
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  43067514 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 43067558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 5e-41; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 14282779 - 14282940
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| |||||||| |||||| |||  |    
T  14282779 tgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgatattgtcaagcgtc 14282878  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  14282879 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 14282940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 14284309 - 14284148
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||||  ||||| ||||||||||||||| |||  |    
T  14284309 tgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgttaaaaacccccctgaaattgtcaagcgtc 14284210  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  14284209 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 14284148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 41707120 - 41706959
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  || ||| ||||||||||| | |||||| ||||||||||||||| |||  |    
T  41707120 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaaaacccctgaattttgcaaaacgtcaaaaacccccctgaaattgtcaagcgtc 41707021  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  41707020 tgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 41706959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 11341969 - 11342129
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  11341969 gagtaaatagtcaattacccctctgaaattgtaactttcgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 11342068  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | || || |||||||| | ||||  ||||| ||||||    
T  11342069 gtcaattacccccctccgttaatttccttcatccaacatgctgatgtggccgttaactgcc 11342129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 11499988 - 11500148
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  11499988 gagtaaatagtcaattacccctctgaaattgtaactttcgtcaaaaatccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 11500087  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | || || |||||||| | ||||  ||||| ||||||    
T  11500088 gtcaattacccccctccgttaatttccttcatccaacatgctgatgtggccgttaactgcc 11500148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 181 - 344
Target Start/End: Complemental strand, 4564268 - 4564106
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagca 280  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||| |||     
T  4564268 tttgagtaaatagtcaatta-ccccttgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcg 4564170  T
Q  281 gctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
     ||||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  4564169 tctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 4564106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 183 - 302
Target Start/End: Complemental strand, 11343470 - 11343351
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||| |||  |    
T  11343470 tgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtc 11343371  T
Q  283 tgtcaattacccccctccgt 302  Q
    ||||||||||||||||||||    
T  11343370 tgtcaattacccccctccgt 11343351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 183 - 302
Target Start/End: Complemental strand, 11501490 - 11501371
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||| |||  |    
T  11501490 tgagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtc 11501391  T
Q  283 tgtcaattacccccctccgt 302  Q
    ||||||||||||||||||||    
T  11501390 tgtcaattacccccctccgt 11501371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 180 - 323
Target Start/End: Original strand, 51304733 - 51304876
Alignment:
Q  180 ttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccact-gcattttgcaaaatgacaaaaatccccctgaaattgtcgag 278  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || | ||||||||||||| |||||| ||||||||||||||| ||    
T  51304733 ttttgagtaaatagtcaatta-ccccctgaaattgtaactttcatcaaaaatcccccttgaattttgcaaaatgtcaaaaacccccctgaaattgtcaag 51304831  T
Q  279 cagctgtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    |  ||||||||||||||||||||| ||| | ||||| ||||||||    
T  51304832 cgtctgtcaattacccccctccgttaatttcctccatccaacatg 51304876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 42813910 - 42813750
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||   ||||||||||||| |||  ||    
T  42813910 gagtaaatagtcaattacccctctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaaaaaccctgaaattgtcaagcgtct 42813811  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  42813810 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 42813750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 183 - 344
Target Start/End: Original strand, 16420117 - 16420277
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||| ||||||||||||  |||||| ||||||||||||||  |||  |    
T  16420117 tgagtaaatagtcaatta-ccccctgaaattgtaactttcgttaaaaatccccctgaattttgcaaaatatcaaaaacccccctgaaattgtaaagcgtc 16420215  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    | |||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  16420216 tatcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 16420277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 323
Target Start/End: Complemental strand, 41729970 - 41729831
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||| ||| ||  ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  41729970 gagtaaatagtcaattacacccctgaaattgtaattttcgtcaaaaacccccctaaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 41729871  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    |||||||| |||||||||| ||| | ||||| ||||||||    
T  41729870 gtcaattatccccctccgttaatttcctccatccaacatg 41729831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 51306408 - 51306246
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatc-ccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcag 281  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||   || ||| ||| ||| ||||| |||||| ||||||||||||||| |||      
T  51306408 tgagtaaatagtcaattacccccctgaaattgtaacttttgtcaaaaaaaacccctgaattatgcgaaatgtcaaaaacccccctgaaattgtcaagcgt 51306309  T
Q  282 ctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  51306308 ctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 51306246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 323
Target Start/End: Complemental strand, 38482580 - 38482443
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||||  ||||| ||||  ||||||||| |||  ||    
T  38482580 gagtaaatagtcaatta-ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgttaaaaaccccctggaaattgtcaagcgtct 38482482  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    ||||||||| ||||||||| ||| | ||||| ||||||||    
T  38482481 gtcaattac-cccctccgttaatttcctccatccaacatg 38482443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 42813228 - 42813389
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcag 281  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||| ||| ||| ||||||| ||||| ||||||  |||||||||||| | |||      
T  42813228 ttgagtaaatagtcaattatcccc-tgaaattgtaactttcatcaaaaacccccctgaattttgccaaatgtcaaaaactcccctgaaattgccaagcgt 42813326  T
Q  282 ctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    | ||||||||||||||||||| ||| | || || |||||||| | ||||  ||||| ||||||    
T  42813327 cggtcaattacccccctccgttaatttccttcatccaacatgctgatgtggccgttaactgcc 42813389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 183 - 344
Target Start/End: Complemental strand, 16422179 - 16422014
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaa----atcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgag 278  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||      ||| ||| ||| || |||||| ||||||  |||||||||||||| ||    
T  16422179 tgagtaaatagtcaattacccccctgaagttgtaactttcgtcaaaaccccccccccctgaattatgaaaaatgtcaaaaactcccctgaaattgtcaag 16422080  T
Q  279 cagctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |  ||||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  16422079 cgtctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 16422014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 46318760 - 46318919
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| |||| | |||||||||||||||||||||  ||| ||| |||||||||||||  ||||| ||||||||||| ||| |||  ||    
T  46318760 gagtaaatagtcaattacccccataaaattgtaactttcgtcaaaaccccccctgaattttgcaaaatgtaaaaaacccccctgaaatggtcaagcgtct 46318859  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||||||| || ||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  46318860 gtcaatta-cctcctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 46318919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 323
Target Start/End: Original strand, 4562755 - 4562895
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    |||||||||| ||||||| |||  | ||||||||| |||||| |||||  ||  || ||||||||||||| |||||| ||| ||||||||||| |||  |    
T  4562755 tgagtaaataatcaattacccctttaaaattgtaattttcgttaaaaactcctttgaattttgcaaaatgtcaaaaaaccctctgaaattgtcaagcgtc 4562854  T
Q  283 tgtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    |||||||||||||||||||| ||| | ||||| ||||||||    
T  4562855 tgtcaattacccccctccgttaatttcctccatccaacatg 4562895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 16834356 - 16834408
Alignment:
Q  175 attctttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||| ||||||||||||||||||| |||||||||||||||| |||||||||    
T  16834356 attcttattgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 16834408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 24250408 - 24250451
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  24250408 gagtaaatagtcaattatccccctgaaattgtaagtttcgtcaa 24250451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 38480948 - 38480996
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaat 231  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  38480948 ttgagtaaatagtcaattatcccc-tgaaattgtaacttttgtcaaaaat 38480996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 344
Target Start/End: Original strand, 41728825 - 41728962
Alignment:
Q  207 tgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagctgtcaattacccccctccgtgaat 306  Q
    |||||||||||||||  ||||||| |||  |  ||||||||||| | |||| | |||  |||||||||| ||||  |||||||||||||||||||| |||    
T  41728825 tgaaattgtaacttttttcaaaaacccccttaaattttgcaaaacgtcaaagacccctttgaaattgtcaagcatttgtcaattacccccctccgttaat 41728924  T
Q  307 attctccagccaacatgttaatgttcccgttcactgcc 344  Q
     | ||||| |||||||| | ||||  ||||| ||||||    
T  41728925 ttcctccatccaacatgctgatgtggccgttaactgcc 41728962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 46294435 - 46294480
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||    
T  46294435 ttgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 46294480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 1798760 - 1798807
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  1798760 tttttgagtaaatagtcaatta-ccccctgaaattgtaagtttcgtcaa 1798807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 24480565 - 24480518
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  24480565 tttttgagtaaatagtcaatt-tccccctgaaattgtaagtttcgtcaa 24480518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 37612826 - 37612874
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||||| ||||||||||||||||| |||| ||||    
T  37612826 tttttgagtaaatagtcaattttccccctgaaattgtaagtttcatcaa 37612874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 52869657 - 52869701
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| |||||||||||||||| |||||||||    
T  52869657 tgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 52869701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 6783973 - 6783934
Alignment:
Q  188 aaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  6783973 aaatagtcaattatccccctgaaattgtaagtttcgtcaa 6783934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 18611149 - 18611192
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||||||||||||||| ||| |||||    
T  18611149 gagtaaatagtcaattatccccctgaaattgtaagttttgtcaa 18611192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 19076491 - 19076448
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||| ||||||||||||||||||||||||| |||||||||    
T  19076491 gagtaaatggtcaattatccccctgaaattgtaagtttcgtcaa 19076448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 19124381 - 19124338
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||| ||||||||||||||||||||||||| |||||||||    
T  19124381 gagtaaatggtcaattatccccctgaaattgtaagtttcgtcaa 19124338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 24253214 - 24253171
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  24253214 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 24253171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 41115920 - 41115873
Alignment:
Q  180 ttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||| ||||||||||||||||| |||| ||||    
T  41115920 ttttgagtaaatagtcaattttccccctgaaattgtaagtttcatcaa 41115873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 44431180 - 44431223
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  44431180 gagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 44431223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 11201899 - 11201941
Alignment:
Q  185 agtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  11201899 agtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 11201941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 7875768 - 7875723
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| ||||| ||||||||||| |||||||||    
T  7875768 ttgagtaaatagtcaattttccccttgaaattgtaagtttcgtcaa 7875723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 46319229 - 46319184
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaa 229  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||    
T  46319229 gagtaaaaagtcaattacccccctgaaattataactttcgtcaaaa 46319184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 1799862 - 1799818
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| |||| ||||||||||| |||||||||    
T  1799862 tgagtaaatagtcaattacccccttgaaattgtaagtttcgtcaa 1799818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 6783127 - 6783171
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| |||||||||||||||  |||||||||    
T  6783127 tgagtaaatagtcaattacccccctgaaattgtatgtttcgtcaa 6783171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 8741720 - 8741768
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||  |||| ||||||||||| |||||||||    
T  8741720 tttttgagtaaatagtcaatttcccccttgaaattgtaagtttcgtcaa 8741768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 18806630 - 18806674
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| ||||||||| ||||||||||||| |||||||||    
T  18806630 tgagtaaataggcaattatcctcctgaaattgtaagtttcgtcaa 18806674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 31196023 - 31196067
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  31196023 tgagtaaatagtcaattttccccctgaaattgtaagtttcatcaa 31196067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 31196904 - 31196864
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttc 222  Q
    |||||||||||||||||| ||||||||||||||||| ||||    
T  31196904 ttgagtaaatagtcaattttccccctgaaattgtaagtttc 31196864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 38618055 - 38618011
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  38618055 tgagtaaatagtcaattttccccctgaaattgtaagtttcatcaa 38618011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 45507885 - 45507933
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||| ||||    
T  45507885 tttttgagtaaatagtcaattttcctcctgaaattgtaagtttcatcaa 45507933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 27234232 - 27234275
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||| | ||||||||||||||||||||||| |||||||||    
T  27234232 gagtaaatcggcaattatccccctgaaattgtaagtttcgtcaa 27234275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 34557990 - 34557947
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||| ||||||||||| ||||||||||| |||||||||    
T  34557990 gagtaaataggcaattatccccttgaaattgtaagtttcgtcaa 34557947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 44209101 - 44209144
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||| |||||| |||||||||||||||| |||||||||    
T  44209101 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaa 44209144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 44432373 - 44432331
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  44432373 gagtaaatagtcaatta-ccccctgaaattgtaagtttcgtcaa 44432331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 48721612 - 48721570
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  48721612 gagtaaatagtcaatta-ccccctgaaattgtaagtttcgtcaa 48721570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 48803362 - 48803405
Alignment:
Q  185 agtaaatagtcaattatcccc-ctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||||| |||||||||||| |||||||||    
T  48803362 agtaaatagtcaattatcccctctgaaattgtaagtttcgtcaa 48803405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 29330171 - 29330125
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||  |||||||||||||||| |||| ||||    
T  29330171 tttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 29330125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 45217890 - 45217844
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||| |||||||||||| ||||| ||||||||||| |||||||||    
T  45217890 tttgagcaaatagtcaattttccccttgaaattgtaagtttcgtcaa 45217844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 23740651 - 23740696
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| |||||||||||||| || |||| ||||    
T  23740651 ttgagtaaatagtcaattttccccctgaaattgaaagtttcatcaa 23740696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 29329288 - 29329333
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  |||||||||||||||| |||| ||||    
T  29329288 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 29329333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 38787530 - 38787575
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||| |||||| |||||||||||||||| |||| ||||    
T  38787530 ttgagtaaataggcaattacccccctgaaattgtaagtttcatcaa 38787575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 48804035 - 48803990
Alignment:
Q  183 tgagtaaatagtcaattatcccc-ctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||    
T  48804035 tgagtaaatagtcaattaccccctctgaaattgtaagtttcgtcaa 48803990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 788035 - 788003
Alignment:
Q  202 ccccctgaaattgtaactttcgtcaaaaatccc 234  Q
    |||||||||||||||| ||||||||||||||||    
T  788035 ccccctgaaattgtaaatttcgtcaaaaatccc 788003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 3898539 - 3898495
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  3898539 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 3898495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 6917145 - 6917188
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||    
T  6917145 tgagtaaatagacaattatcccc-tgaaattgtaagtttcgtcaa 6917188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 6918888 - 6918845
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||    
T  6918888 tgagtaaataggcaatta-ccccctgaaattgtaagtttcgtcaa 6918845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 9681129 - 9681081
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||| |||||||||||||||| | ||||||||||||||  |||||||||    
T  9681129 ttttcgagtaaatagtcaatttttcccctgaaattgtaggtttcgtcaa 9681081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 13243092 - 13243048
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  13243092 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 13243048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 16266455 - 16266498
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  16266455 tgagtaaatagtcaatt-tccccctgaaattgtaagtttcatcaa 16266498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 20898513 - 20898557
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  20898513 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 20898557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 20899393 - 20899349
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  20899393 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 20899349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 22776280 - 22776232
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||||| ||||  ||||||||||| |||| ||||    
T  22776280 tttttgagtaaatagtcaattttccctttgaaattgtaagtttcatcaa 22776232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 24483083 - 24483036
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||||| ||  ||||||||||||| |||||||||    
T  24483083 tttttgagtaaatagtcaatt-tcttcctgaaattgtaaatttcgtcaa 24483036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 24982644 - 24982688
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  24982644 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 24982688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 26441927 - 26441970
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||| |||||||||||||||||| |||| ||||    
T  26441927 tgagtaaatagtcaat-atccccctgaaattgtaagtttcatcaa 26441970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 31434653 - 31434701
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||| |||||||||||||||| ||||||| ||||||||| |||| ||||    
T  31434653 ttttggagtaaatagtcaattttccccctaaaattgtaagtttcatcaa 31434701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 32537309 - 32537265
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||   ||||||||||||||| |||||||||    
T  32537309 tgagtaaatagtcaatttctcccctgaaattgtaagtttcgtcaa 32537265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 35393271 - 35393231
Alignment:
Q  187 taaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||  |||||||||||||||| |||||||||    
T  35393271 taaatagtcaatttcccccctgaaattgtaagtttcgtcaa 35393231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 37275578 - 37275626
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||  |||||| ||||||||| |||| ||||    
T  37275578 tttttgagtaaatagtcaatttcccccctaaaattgtaagtttcatcaa 37275626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 43680363 - 43680407
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  43680363 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 43680407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 44397647 - 44397599
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||| |||||||||  |||||| |||||||||||||||| |||||||||    
T  44397647 ttttagagtaaataagcaattacccccctgaaattgtaagtttcgtcaa 44397599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 46295614 - 46295574
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgt 224  Q
    ||||||||||||||||| | |||||||||||||| ||||||    
T  46295614 gagtaaatagtcaattacctccctgaaattgtaagtttcgt 46295574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 344
Target Start/End: Complemental strand, 46319187 - 46319099
Alignment:
Q  256 aaaatccccctgaaattgtcgagcagctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    |||| ||||||||||||||| |||  ||||||||||||||||| ||| ||  | ||||| |||||||| | ||||  ||||| ||||||    
T  46319187 aaaacccccctgaaattgtcaagcgtctgtcaattaccccccttcgttaacttcctccatccaacatgctgatgtggccgttaactgcc 46319099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 46803757 - 46803805
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||  | |||||||||||||| |||| ||||    
T  46803757 tttttgagtaaatagtcaatttcctccctgaaattgtaagtttcatcaa 46803805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 47434334 - 47434290
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| ||||| ||||||||||| |||| ||||    
T  47434334 tgagtaaatagtcaattttccccatgaaattgtaagtttcatcaa 47434290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 48720770 - 48720810
Alignment:
Q  187 taaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||| | |||||||||||||| |||||||||    
T  48720770 taaatagtcaattacctccctgaaattgtaagtttcgtcaa 48720810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 51619408 - 51619452
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  51619408 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 51619452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 52869915 - 52869951
Alignment:
Q  191 tagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||| |||||||||||||||| |||||||||    
T  52869915 tagtcaattacccccctgaaattgtaagtttcgtcaa 52869951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 344
Target Start/End: Original strand, 10917859 - 10918019
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  10917859 gagtaaatagtcaatcacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgtct 10917958  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  10917959 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 10918019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 181 - 344
Target Start/End: Original strand, 4137653 - 4137815
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagca 280  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||| |||||| |||||| ||||||||||||||| |||     
T  4137653 tttgagtaaatagtcaatta-ccccctgaaattgtaactttcgtcaaaaacccccctgaattttgtaaaatgtcaaaaacccccctgaaattgtcaagcg 4137751  T
Q  281 gctgtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
     ||||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  4137752 tctgtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 4137815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 1387706 - 1387546
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| |||| |||||||||| |||  ||    
T  1387706 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaacccccttgaaattgtcaagcgtct 1387607  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||| ||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  1387606 gtcaattaccctcctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 1387546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 184 - 344
Target Start/End: Complemental strand, 4139029 - 4138870
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||||| |||||| ||||||||||||||| |||  |     
T  4139029 gagtaaatagtcaattacccccctgaaattgtaactttcgtcaaaaacccccctgaattttgcaaaatgtcaaaaa-ccccctgaaattgtcaagcgtcg 4138931  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatgttaatgttcccgttcactgcc 344  Q
    ||||||||||||||||||| ||| | ||||| |||||||| | ||||  ||||| ||||||    
T  4138930 gtcaattacccccctccgttaatttcctccatccaacatgctgatgtggccgttaactgcc 4138870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 183 - 323
Target Start/End: Complemental strand, 10919387 - 10919247
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccac-tgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcag 281  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||| ||||| || ||||||||||||| |||||| ||||||||||||||| |||      
T  10919387 tgagtaaatagtcaattactcccctgaaattgtaactttcgtcaaaaa-cccacatgaattttgcaaaatgtcaaaaacccccctgaaattgtcaagcgt 10919289  T
Q  282 ctgtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    ||||||||||||||||||||| ||| | ||||| ||||||||    
T  10919288 ctgtcaattacccccctccgttaatttcctccatccaacatg 10919247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 323
Target Start/End: Original strand, 1378455 - 1378593
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||| |||  || ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  1378455 gagtaaatagtcaattacccttctgaaattgtaactttcgtcaaaaacccccttgaattttgcaaaatgtcaaaaa-ccccctgaaattgtcaagcgtct 1378553  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    ||||||||||||||||||| ||| | ||||| ||||||||    
T  1378554 gtcaattacccccctccgttaatttcctccatccaacatg 1378593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 184 - 323
Target Start/End: Original strand, 1386203 - 1386341
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagct 283  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||| |||  || ||||||||||||| |||||| ||||||||||||||| |||  ||    
T  1386203 gagtaaatagtcaattacccttctgaaattgtaactttcgtcaaaaacccccttgaattttgcaaaatgtcaaaaa-ccccctgaaattgtcaagcgtct 1386301  T
Q  284 gtcaattacccccctccgtgaatattctccagccaacatg 323  Q
    ||||||||||||||||||| ||| | ||||| ||||||||    
T  1386302 gtcaattacccccctccgttaatttcctccatccaacatg 1386341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 302
Target Start/End: Original strand, 17732014 - 17732133
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatcccactgcattttgcaaaatgacaaaaatccccctgaaattgtcgagcagc 282  Q
    ||||||||||| |||  | |||||||||||||||  |||||||||||||||| |||  ||||  |||||  |||||| ||||||||||||| | | |       
T  17732014 tgagtaaataggcaaaaacccccctgaaattgtagttttcgtcaaaaatccccctgatttttagaaaatttcaaaaaaccccctgaaattgacaaacgtt 17732113  T
Q  283 tgtcaattacccccctccgt 302  Q
     |||||||||||||||||||    
T  17732114 agtcaattacccccctccgt 17732133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 225
Target Start/End: Original strand, 10624456 - 10624497
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtc 225  Q
    |||||||||| ||||||||||||||||||||||| |||||||    
T  10624456 gagtaaataggcaattatccccctgaaattgtaagtttcgtc 10624497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 14394670 - 14394715
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||    
T  14394670 ttgagtaaatagtcaattttccccctgaaattgtaagtttcatcaa 14394715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 34657801 - 34657846
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||    
T  34657801 ttgagtaaatagtcaattacccccttgaaattgtaagtttcgtcaa 34657846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 34658620 - 34658575
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| | ||||||||||||||| |||||||||    
T  34658620 ttgagtaaatagtcaatttttcccctgaaattgtaagtttcgtcaa 34658575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 20857595 - 20857547
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||| ||||    
T  20857595 tttttgagtaaatagtcaattttcctcctgaaattgtaagtttcatcaa 20857547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 11098928 - 11098971
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||| |||| ||||||||||| |||||||||    
T  11098928 gagtaaatagtcaattacccccttgaaattgtaagtttcgtcaa 11098971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 15347431 - 15347478
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaa 230  Q
    ||||||||||| |||  | |||||||||||||||||||||||||||||    
T  15347431 tgagtaaataggcaaaaacccccctgaaattgtaactttcgtcaaaaa 15347478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 28538383 - 28538341
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| ||||||||||||||| |||||||||    
T  28538383 gagtaaatagtcaattat-cccctgaaattgtaagtttcgtcaa 28538341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 30709486 - 30709541
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaaaaatccc 234  Q
    ||||||||| ||||| |||  | ||| |||||||||||||||||||||||||||||    
T  30709486 tttttgagtgaataggcaaaaacccctctgaaattgtaactttcgtcaaaaatccc 30709541  T

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Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 11624626 - 11624672
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||  |||||||||||||||| |||| ||||    
T  11624626 tttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 11624672  T

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Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 23074300 - 23074342
Alignment:
Q  185 agtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||| |||||| |||||||||||||||| |||||||||    
T  23074300 agtaaataggcaattacccccctgaaattgtaagtttcgtcaa 23074342  T

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Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 23075438 - 23075392
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||| |||||| |||||| ||||||||| |||||||||    
T  23075438 tttgagtaaataggcaattacccccctaaaattgtaagtttcgtcaa 23075392  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 217
Target Start/End: Original strand, 26609695 - 26609729
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaa 217  Q
    ||||||||||||||||| |||||||||||||||||    
T  26609695 tgagtaaatagtcaattttccccctgaaattgtaa 26609729  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 2318568 - 2318523
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  |||||||||||||||| |||| ||||    
T  2318568 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 2318523  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 8743177 - 8743132
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  |||||||||||||||| |||| ||||    
T  8743177 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 8743132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 20856711 - 20856756
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||| ||| ||||||||||||||||| |||| ||||    
T  20856711 ttgagtaaatagtccattttccccctgaaattgtaagtttcatcaa 20856756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 15146656 - 15146612
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  15146656 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 15146612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 15348313 - 15348281
Alignment:
Q  202 ccccctgaaattgtaactttcgtcaaaaatccc 234  Q
    ||||||||||||||| |||||||||||||||||    
T  15348313 ccccctgaaattgtagctttcgtcaaaaatccc 15348281  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 18739413 - 18739369
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  18739413 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 18739369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 32628766 - 32628718
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||| ||||||||||||||||  |||||||||||||||| |||| ||||    
T  32628766 ttttcgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 32628718  T

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Target: scaffold0031 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 95097 - 95051
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||    
T  95097 tttgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 95051  T

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Target: scaffold0031; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 94244 - 94289
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||    
T  94244 ttgagtaaatagtcaattatccccctgaaattgtaagtttcatcaa 94289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 1330 - 1374
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||| |||||||||||||||| |||||||||    
T  1330 tgagtaaatagtcaattacccccctgaaattgtaagtttcgtcaa 1374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 1732 - 1777
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||| ||||||||||| ||||||||||||||||| |||||||||    
T  1732 ttgagtcaatagtcaattttccccctgaaattgtaagtttcgtcaa 1777  T

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Target: scaffold0060 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 66584 - 66628
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||    
T  66584 tgagtaaatagtcaattacacccctgaaattgtaagtttcgtcaa 66628  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 239154 - 239202
Alignment:
Q  176 ttctttttgagtaaatagtcaattatccccctgaaattgtaactttcgt 224  Q
    |||||||||||||||||| |||||| | |||||||||||||| ||||||    
T  239154 ttctttttgagtaaataggcaattacctccctgaaattgtaagtttcgt 239202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 1711 - 1754
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||    
T  1711 gagtaaatagtcaattttccccctgaaattgtaagtttcatcaa 1754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 11446 - 11403
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||    
T  11446 gagtaaatagtcaattttccccctgaaattgtaagtttcatcaa 11403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 43501 - 43458
Alignment:
Q  184 gagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||| |||||| |||||||||||||||| |||||||||    
T  43501 gagtaaataggcaattacccccctgaaattgtaagtttcgtcaa 43458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 42615 - 42569
Alignment:
Q  181 tttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||  |||||||||||||||  |||||||||    
T  42615 tttgagtaaatagtcaatttcccccctgaaattgtaggtttcgtcaa 42569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 234
Target Start/End: Original strand, 32372 - 32401
Alignment:
Q  205 cctgaaattgtaactttcgtcaaaaatccc 234  Q
    ||||||||||||||||||||||||||||||    
T  32372 cctgaaattgtaactttcgtcaaaaatccc 32401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 185595 - 185640
Alignment:
Q  182 ttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    ||||||||||||||||||  |||||||||||||||| |||| ||||    
T  185595 ttgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 185640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 8143 - 8095
Alignment:
Q  179 tttttgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||||||  ||||||||||||| || |||| ||||    
T  8143 tttttgagtaaatagtcaatttcccccctgaaattgcaagtttcatcaa 8095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 1870 - 1826
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||| |||| ||||    
T  1870 tgagtaaatagtcaatttcccccctgaaattgtaagtttcatcaa 1826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 13652 - 13608
Alignment:
Q  183 tgagtaaatagtcaattatccccctgaaattgtaactttcgtcaa 227  Q
    |||||||||||||||||  |||||||||||||||  |||||||||    
T  13652 tgagtaaatagtcaatttcccccctgaaattgtaggtttcgtcaa 13608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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