View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17673_high_7 (Length: 343)
Name: NF17673_high_7
Description: NF17673
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17673_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 86 - 342
Target Start/End: Complemental strand, 51115438 - 51115184
Alignment:
| Q |
86 |
attctctaatttttcttattaagaatagttggttgataagtaagttagtctcggtcaatttcccaatagttgttctttaattctaattagactactctcc |
185 |
Q |
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| T |
51115438 |
attctctaatttttcttattaagaatagttggttgataagtaagttagtctcggtcaatttcccaatagttgttctttaattctaattagactactctcc |
51115339 |
T |
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| Q |
186 |
aatttacccaaggctaaaccaaaatgcacacaataacagattgtttaatgattaaacaaatacctagcataatttacataaatactaaggaggtgaggtg |
285 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51115338 |
aatttacccaaggctaaaccaaaatgcacacaataacagattgtttaatgattaaacaaatacctagcataatttacataaatactaaggaggtgaggtg |
51115239 |
T |
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| Q |
286 |
aaagtgtcgcaaaaaatagcatacatgagagacttgtgtattcaataatcaagtcac |
342 |
Q |
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| T |
51115238 |
aaagtgtcgcaaaaaatagcatacatgagagact--tgtattcaataatcaagtcac |
51115184 |
T |
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