View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17674_high_3 (Length: 362)
Name: NF17674_high_3
Description: NF17674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17674_high_3 |
 | |
|
| [»] scaffold0006 (4 HSPs) |
| | |
|
| [»] scaffold0012 (1 HSPs) |
| | |
|
| [»] scaffold0069 (1 HSPs) |
| | |
|
| [»] scaffold0406 (1 HSPs) |
| | |
|
| [»] scaffold1514 (1 HSPs) |
| | |
|
| [»] scaffold0068 (1 HSPs) |
| | |
|
| [»] scaffold0238 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 306; Significance: 1e-172; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 13 - 347
Target Start/End: Original strand, 20365500 - 20365834
Alignment:
| Q |
13 |
ttgtttcataaagtggttatcacagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagagg |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20365500 |
ttgtttgataaagtggttatcacagaagtatcgaaaaatccagacattaaaaaaattcaagcggagattgcagatttcttgggtctgcgatttgaagagg |
20365599 |
T |
|
| Q |
113 |
agagtattctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaa |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20365600 |
agagtattctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaa |
20365699 |
T |
|
| Q |
213 |
agaagtggggatatcagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggat |
312 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20365700 |
agaagtggggataccagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggat |
20365799 |
T |
|
| Q |
313 |
ttctctttcaaagttgaacttatgagtgaaaatga |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
20365800 |
ttctctttcaaagttgaacttatgagtgaaaatga |
20365834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 20 - 347
Target Start/End: Original strand, 13503034 - 13503361
Alignment:
| Q |
20 |
ataaagtggttatcacagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagaggagagtat |
119 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13503034 |
ataaagtggttaaggcagaagtatcgaaaaaaccagacattagaagaattcaaggggagattgcagatttcttgggtctgcgatttgaagaggagagtat |
13503133 |
T |
|
| Q |
120 |
tctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtg |
219 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13503134 |
tcccggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtg |
13503233 |
T |
|
| Q |
220 |
gggatatcagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctt |
319 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
13503234 |
gggataccagttggtgatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttcactt |
13503333 |
T |
|
| Q |
320 |
tcaaagttgaacttatgagtgaaaatga |
347 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
13503334 |
tcaaagttgaacttatgagtgaaaatga |
13503361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 20 - 347
Target Start/End: Original strand, 13607614 - 13607941
Alignment:
| Q |
20 |
ataaagtggttatcacagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagaggagagtat |
119 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13607614 |
ataaagtggttaaggcagaagtatcgaaaaaaccagacattagaagaattcaaggggagattgcagatttcttgggtctgcgatttgaagaggagagtat |
13607713 |
T |
|
| Q |
120 |
tctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtg |
219 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13607714 |
tcccggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtg |
13607813 |
T |
|
| Q |
220 |
gggatatcagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctt |
319 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
13607814 |
gggataccagttggtgatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttcactt |
13607913 |
T |
|
| Q |
320 |
tcaaagttgaacttatgagtgaaaatga |
347 |
Q |
| |
|
|||||||||||||||||| ||||||||| |
|
|
| T |
13607914 |
tcaaagttgaacttatgactgaaaatga |
13607941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 20 - 344
Target Start/End: Original strand, 13581349 - 13581673
Alignment:
| Q |
20 |
ataaagtggttatcacagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagaggagagtat |
119 |
Q |
| |
|
|||||||||||| |||||||||||||||| | ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13581349 |
ataaagtggttaaggcagaagtatcgaaaaaactagacattagaagaattcaaggggagattgcagatttcttgggtctgcgatttgaagaggagagtaa |
13581448 |
T |
|
| Q |
120 |
tctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtg |
219 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13581449 |
tcgtggcagagcagaacgccttagacaaagaatcaagatggagaaaagtatccttatcattctagataacatatggaccatacttgatttgaaagaagtg |
13581548 |
T |
|
| Q |
220 |
gggatatcagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctt |
319 |
Q |
| |
|
|||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |
|
|
| T |
13581549 |
gggataccagctggtgatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgttccaaaggatttcactt |
13581648 |
T |
|
| Q |
320 |
tcaaagttgaacttatgagtgaaaa |
344 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
13581649 |
tcaaagttgaacttatgagtgaaaa |
13581673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 13 - 344
Target Start/End: Original strand, 13667610 - 13667941
Alignment:
| Q |
13 |
ttgtttcataaagtggttatcacagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagagg |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
13667610 |
ttgtttgataaagtggttatcacagaagtatcgaaaaatccagacattaaaaaaattcaaggggagattgcagatttcttgagtctgcgatttgaagagg |
13667709 |
T |
|
| Q |
113 |
agagtattctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaa |
212 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13667710 |
agagtaatcgtggcagagcagaacgccttagacaaagaatcaagatggagaaaagtatccttatcattctagataacatatggaccatacttgatttgaa |
13667809 |
T |
|
| Q |
213 |
agaagtggggatatcagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggat |
312 |
Q |
| |
|
| ||||||||| || ||||||||||||||||||||||||| ||||||||| || | |||| |||||| |||||| |||||||||||| ||||| ||| |
|
|
| T |
13667810 |
aacagtggggattccatttggtaatgaacataatggttgcaagttgttgatgtcatgcagaagtcaagaagtgttgtcgcaaatggatgttccaaaagat |
13667909 |
T |
|
| Q |
313 |
ttctctttcaaagttgaacttatgagtgaaaa |
344 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |
|
|
| T |
13667910 |
ttcactttcaaagttgaacttatgagtgaaaa |
13667941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 20 - 344
Target Start/End: Complemental strand, 19141941 - 19141617
Alignment:
| Q |
20 |
ataaagtggttatcacagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagaggagagtat |
119 |
Q |
| |
|
|||||||||||| |||||||| || ||||||||||||||| |||||| ||||||||||||||||||| || |||||||||||||||||| ||| |
|
|
| T |
19141941 |
ataaagtggttaagacagaagtttctaaaaatccagacattaaaagaattcaaggggagattgcagatttcttgagtatgcgatttgaagaggagactat |
19141842 |
T |
|
| Q |
120 |
tctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtg |
219 |
Q |
| |
|
| | ||||||||| ||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| || ||| |
|
|
| T |
19141841 |
tgttggcagagcacaacgcctaagacaaagaatcaagatggagaaaagtatccttatcattctagataacatatggaccatacttgatttggaaatagta |
19141742 |
T |
|
| Q |
220 |
gggatatcagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctt |
319 |
Q |
| |
|
||||| || |||| ||| ||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| |||||||||||| ||| |
|
|
| T |
19141741 |
gggattccatttggcaataaacataatggttgcaaattgttgatgacatgcagaaatcaagaagtgttgctgcaaatggatgttccaaaggatttcactt |
19141642 |
T |
|
| Q |
320 |
tcaaagttgaacttatgagtgaaaa |
344 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
19141641 |
tcaaagttgaacttatgagtgaaaa |
19141617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 20 - 344
Target Start/End: Original strand, 20474579 - 20474903
Alignment:
| Q |
20 |
ataaagtggttatcacagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagaggagagtat |
119 |
Q |
| |
|
|||||||||||| |||||||| || ||||||||||||||| |||||| ||||||||||||||||||| || |||| ||||||||||||| ||| |
|
|
| T |
20474579 |
ataaagtggttaagacagaagtttctaaaaatccagacattaaaagaattcaaggggagattgcagatttcttgagtatgcggtttgaagaggagactat |
20474678 |
T |
|
| Q |
120 |
tctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtg |
219 |
Q |
| |
|
| | ||||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
20474679 |
tgttggcagagcacaacgcctcagacaaagaatcaagatggagaaaagcatccttatcattctagataacatatggaccaaacttgatttgaaagaagta |
20474778 |
T |
|
| Q |
220 |
gggatatcagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctt |
319 |
Q |
| |
|
||||| || |||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||| ||||||||||||| |||||||||| | ||| |
|
|
| T |
20474779 |
gggattccatttggtaatgaacataatggttgcaaattgttgatgacatgcagaaatcaagaagtgttgttgcaaatggatgttccaaaggattacactt |
20474878 |
T |
|
| Q |
320 |
tcaaagttgaacttatgagtgaaaa |
344 |
Q |
| |
|
|||||||| |||||||||||||||| |
|
|
| T |
20474879 |
tcaaagttaaacttatgagtgaaaa |
20474903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 13 - 344
Target Start/End: Original strand, 13681694 - 13682040
Alignment:
| Q |
13 |
ttgtttcataaagtggttatcacagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagagg |
112 |
Q |
| |
|
||||| ||||||||||||| |||||||| || ||||||||||||||| |||||| ||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
13681694 |
ttgttccataaagtggttaagacagaagtttctaaaaatccagacattaaaagaattcaaggggagattgccgatttcatgggtctgcgatttgaagagg |
13681793 |
T |
|
| Q |
113 |
agagtattctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaa |
212 |
Q |
| |
|
||| |||||| ||||||||| ||||||| ||||||| |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13681794 |
agactattcttggcagagcacaacgcctaagacaaacaatcaagatgaagaaaagcatccttatcattctagataacatatggaccatacttgatttgaa |
13681893 |
T |
|
| Q |
213 |
agaagtggggatatcagttggtaatgaacataatggt---------------tgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatg |
297 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||| || ||||||||||||| |||||| |
|
|
| T |
13681894 |
agaagtggggataccagttggtgatgaacataatggtgatgaacataatggatgcaaattgttgatgacaagtagagatgaagatgtgttgcttcaaatg |
13681993 |
T |
|
| Q |
298 |
gatgtcccaaaggatttctctttcaaagttgaacttatgagtgaaaa |
344 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||||| ||||||| |
|
|
| T |
13681994 |
gatgtcccaaaggatttcactttcaaagttaaacttatgcgtgaaaa |
13682040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 10 - 258
Target Start/End: Original strand, 13419123 - 13419371
Alignment:
| Q |
10 |
aatttgtttcataaagtggttatcacagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaag |
109 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
13419123 |
aatttgttcgataaagtggttaaggcagaagtatcgaaaaaatcagacattagaagaattcaaggggagattgcagatttcttgggtcttcgatttgaag |
13419222 |
T |
|
| Q |
110 |
aggagagtattctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgattt |
209 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||| |
|
|
| T |
13419223 |
aggagagtattcccggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattcttgataacatatggaccatagtcgattt |
13419322 |
T |
|
| Q |
210 |
gaaagaagtggggatatcagttggtaatgaacataatggttgcaaattg |
258 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
13419323 |
gaaagaagtggggataccagttggtaatgaacataatggttgcaaattg |
13419371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 20 - 344
Target Start/End: Complemental strand, 15902289 - 15901965
Alignment:
| Q |
20 |
ataaagtggttatcacagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagaggagagtat |
119 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||||| |||||| | ||||||||||||| ||| ||| ||| ||||| || ||| |
|
|
| T |
15902289 |
ataatgtggttaagacagaagtatcgaaaaatccagacatcaaattaattcaagagcagattgcagattttttgaatctataattcaaagagacgactat |
15902190 |
T |
|
| Q |
120 |
tctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtg |
219 |
Q |
| |
|
||| |||| |||| ||||||| ||||| |||||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||||||| |||| |
|
|
| T |
15902189 |
tcttggcaaagcacaacgcctaagacagagaatcaagatggagaaaagtatccttatcattctagataatgtatggaccaaacttgatttgaaaatagtg |
15902090 |
T |
|
| Q |
220 |
gggatatcagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctt |
319 |
Q |
| |
|
||||| || ||||| |||||||||| ||||| ||||||||||||||||||||| |||||||||||||| | ||||||||||| |||||||||||||||| |
|
|
| T |
15902089 |
gggattccatttggtgatgaacataaaggttgtaaattgttgatgacaagtagagatcaagatgtgttgtttcaaatggatgttccaaaggatttctctt |
15901990 |
T |
|
| Q |
320 |
tcaaagttgaacttatgagtgaaaa |
344 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
15901989 |
tcaaagttgaacttatgagtgaaaa |
15901965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 20 - 344
Target Start/End: Original strand, 13540268 - 13540592
Alignment:
| Q |
20 |
ataaagtggttatcacagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagaggagagtat |
119 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||| |||| |||||| |||||||||||||| ||| ||| ||||| |||||| || ||| |
|
|
| T |
13540268 |
ataatgtggttatgacagaagtatcgaaaaatccaaacatcaaattaattcaagatgagattgcagattttttgaatctacgattcgaagagacgactat |
13540367 |
T |
|
| Q |
120 |
tctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtg |
219 |
Q |
| |
|
||| ||||||||| ||||||| || || |||||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||||||| || |
|
|
| T |
13540368 |
tcttggcagagcacaacgcctaaggcagagaatcaagatggagaaaagtatccttatcattctagataatgtatggaccaaacttgatttgaaaattgtt |
13540467 |
T |
|
| Q |
220 |
gggatatcagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctt |
319 |
Q |
| |
|
||||| || |||| ||||||||||| ||||||||||||||||||||||||||||||| || |||||||| ||||||||||| ||||||||||| || |
|
|
| T |
13540468 |
gggattccatttggcaatgaacataaaagttgcaaattgttgatgacaagtagaaatcaggaagtgttgcttcaaatggatgttccaaaggattttattt |
13540567 |
T |
|
| Q |
320 |
tcaaagttgaacttatgagtgaaaa |
344 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
13540568 |
tcaaagttgaacttatgagtgaaaa |
13540592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 68 - 347
Target Start/End: Complemental strand, 16471447 - 16471168
Alignment:
| Q |
68 |
ttcaagcggagattgcagatttcttgggtctgcgatttgaagaggagagtattctcggcagagcagaacgccttagacaaagaatcaagatggagagaag |
167 |
Q |
| |
|
|||||| ||||||||||||||| || || ||| ||| | ||||||| |||| || |||||| | ||||| ||||| |||||||||||||||| ||| |
|
|
| T |
16471447 |
ttcaaggggagattgcagatttgctgagtttgcaattcgttgaggagactattgctggaagagcacatcgcctaagacagagaatcaagatggagaaaag |
16471348 |
T |
|
| Q |
168 |
tgtccttatcattctagataacatatggaccatacttgatttgaaagaagtggggatatcagttggtaatgaacataatggttgcaaattgttgatgaca |
267 |
Q |
| |
|
| || || ||||||||||| | ||||||| ||||||||||||||| ||||||| || || ||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
16471347 |
tatcattgtcattctagatgatatatggagcatacttgatttgaagaaagtgggaattccatttggtaaagaacataatggttgcaaattgttgatgaca |
16471248 |
T |
|
| Q |
268 |
agtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctttcaaagttgaacttatgagtgaaaatga |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||| |||||||| |
|
|
| T |
16471247 |
tctagaaatcaagatgtgttgctgcaaatggatgttccaaaggatttcactttcaaacttgaacttatgagagaaaatga |
16471168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 76 - 347
Target Start/End: Original strand, 13647146 - 13647417
Alignment:
| Q |
76 |
gagattgcagatttcttgggtctgcgatttgaagaggagagtattctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtcctta |
175 |
Q |
| |
|
||||||||||||| |||||| ||| ||| | ||||||| | |||| ||||||||| | ||||| ||||| |||||||||||||||| || | ||||| |
|
|
| T |
13647146 |
gagattgcagattctttgggtttgcaattcgttgaggagactgttcttggcagagcaaatcgcctaagacagagaatcaagatggagaaaaatatccttg |
13647245 |
T |
|
| Q |
176 |
tcattctagataacatatggaccatacttgatttgaaagaagtggggatatcagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaa |
275 |
Q |
| |
|
||||| ||||| | || |||| |||||||||||||| ||||||| || || |||| ||| |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
13647246 |
tcattttagatgatatttggagtatacttgatttgaagaaagtgggaattccatttggaaataaacataatggttgcaaattgttgatgactagtagaaa |
13647345 |
T |
|
| Q |
276 |
tcaagatgtgttgctgcaaatggatgtcccaaaggatttctctttcaaagttgaacttatgagtgaaaatga |
347 |
Q |
| |
|
|||||||||||| || |||||||||| |||| ||| ||| |||||||| |||||||||||| ||||||||| |
|
|
| T |
13647346 |
tcaagatgtgttactaaaaatggatgttccaatggagttcactttcaaacttgaacttatgaatgaaaatga |
13647417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006 (Bit Score: 267; Significance: 1e-149; HSPs: 4)
Name: scaffold0006
Description:
Target: scaffold0006; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 20 - 347
Target Start/End: Original strand, 136274 - 136601
Alignment:
| Q |
20 |
ataaagtggttatcacagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagaggagagtat |
119 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
136274 |
ataaagtggttaaggcagaagtatcgaaaaaaccagacattagaagaattcaaggggagattgcagatttcttgggtctgcgatttgaagaggagagtat |
136373 |
T |
|
| Q |
120 |
tctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtg |
219 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
136374 |
tcttggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtg |
136473 |
T |
|
| Q |
220 |
gggatatcagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctt |
319 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
136474 |
gggataccagttggttatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttcactt |
136573 |
T |
|
| Q |
320 |
tcaaagttgaacttatgagtgaaaatga |
347 |
Q |
| |
|
|||||||||||||||||| ||||||||| |
|
|
| T |
136574 |
tcaaagttgaacttatgactgaaaatga |
136601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 20 - 347
Target Start/End: Original strand, 51880 - 52207
Alignment:
| Q |
20 |
ataaagtggttatcacagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagaggagagtat |
119 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51880 |
ataaagtggttaaggcagaagtatcgaaaaaaccagacattagaagaattcaaggggagattgcagatttcttgggtctgcgatttgaagaggagagtat |
51979 |
T |
|
| Q |
120 |
tctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtg |
219 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||| || |
|
|
| T |
51980 |
tcccggcagagcagaacgccttagacaaagaatcaagatggagataagtttccttatcattctagataacatatggactttacttgatttgaaagaattg |
52079 |
T |
|
| Q |
220 |
gggatatcagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctt |
319 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
52080 |
gggataccagttggttatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttcactt |
52179 |
T |
|
| Q |
320 |
tcaaagttgaacttatgagtgaaaatga |
347 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
52180 |
tcaaagttgaacttatgagtgaaaatga |
52207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 13 - 344
Target Start/End: Original strand, 165224 - 165555
Alignment:
| Q |
13 |
ttgtttcataaagtggttatcacagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagagg |
112 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
165224 |
ttgtttgataaagtggttatcacagaagtatcgaaaaatccagacattaaaaaaattcaaggggagattgcagatttcttgagtctgcgatttgaagagg |
165323 |
T |
|
| Q |
113 |
agagtattctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaa |
212 |
Q |
| |
|
|||||| || |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
165324 |
agagtaatcgtggcagagcagaacgccttagacaaagaatcaagatggagaaaagtatccttatcattctagataacatatggaccatacttgatttgaa |
165423 |
T |
|
| Q |
213 |
agaagtggggatatcagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggat |
312 |
Q |
| |
|
| ||||||||| || ||||||||||||||||||||||||| ||||||||| || | |||| |||||| |||||| |||||||||||| ||||| ||| |
|
|
| T |
165424 |
aacagtggggattccatttggtaatgaacataatggttgcaagttgttgatgtcatgcagaagtcaagaagtgttgtcgcaaatggatgttccaaaagat |
165523 |
T |
|
| Q |
313 |
ttctctttcaaagttgaacttatgagtgaaaa |
344 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |
|
|
| T |
165524 |
ttcactttcaaagttgaacttatgagtgaaaa |
165555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0006; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 34 - 344
Target Start/End: Original strand, 101663 - 101973
Alignment:
| Q |
34 |
acagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagaggagagtattctcggcagagcag |
133 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||| |||||||||||||| ||||||||||||||| |||||||| | || || || ||||||| |
|
|
| T |
101663 |
acagaagtatcgaaaaatcaagacattaaaaggattcaaggggagattgcagattccttgggtctgcgattggaagaggaaactaatcgtggtagagcag |
101762 |
T |
|
| Q |
134 |
aacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtggggatatcagttgg |
233 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
| T |
101763 |
aacgccttagacaaagaatcaagatggagaaaagtatccttatcattctagataacatatggaccatacttgttttgaaagaagtggggataccagttgg |
101862 |
T |
|
| Q |
234 |
taatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctttcaaagttgaactt |
333 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||| |||||||| ||| ||||||||||||||||| |
|
|
| T |
101863 |
tgatgaacataatggttgcaaattgttgatgacaagtagagatcaagaagtgttactgcaaatggatgttccaaaggagttcactttcaaagttgaactt |
101962 |
T |
|
| Q |
334 |
atgagtgaaaa |
344 |
Q |
| |
|
||||||||||| |
|
|
| T |
101963 |
atgagtgaaaa |
101973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 20 - 347
Target Start/End: Complemental strand, 20817809 - 20817482
Alignment:
| Q |
20 |
ataaagtggttatcacagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagaggagagtat |
119 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| |||||| |||||||||| |
|
|
| T |
20817809 |
ataaagtggttatgacacaagtatcgaaaaatccagacatcaaaaaaattcaaggggagattgcagatttcttgagtctgcaatttgacgaggagagtaa |
20817710 |
T |
|
| Q |
120 |
tctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtg |
219 |
Q |
| |
|
|| |||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20817709 |
tcgtggcagagcagaacgccttagacgaagaatcaagatggagaaaagtatccttatcattctagataacatatggaccatacttgatttgaaagaagtg |
20817610 |
T |
|
| Q |
220 |
gggatatcagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctt |
319 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||| |
|
|
| T |
20817609 |
gggataccagttggtaatgaacataatggatgcaaattgttgatgacaagtagaaatcaagaagtgttgctgcaaatggatgttccaaaggatttcactt |
20817510 |
T |
|
| Q |
320 |
tcaaagttgaacttatgagtgaaaatga |
347 |
Q |
| |
|
|||||||||||||| ||||||||||||| |
|
|
| T |
20817509 |
tcaaagttgaacttttgagtgaaaatga |
20817482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 68 - 347
Target Start/End: Original strand, 112882 - 113161
Alignment:
| Q |
68 |
ttcaagcggagattgcagatttcttgggtctgcgatttgaagaggagagtattctcggcagagcagaacgccttagacaaagaatcaagatggagagaag |
167 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
112882 |
ttcaaggggagattgcagatttcttgagtctgcgatttgaagtggagagtaatcgtggcagagcagaacgccttagacaaagaatcaagatggagaaaag |
112981 |
T |
|
| Q |
168 |
tgtccttatcattctagataacatatggaccatacttgatttgaaagaagtggggatatcagttggtaatgaacataatggttgcaaattgttgatgaca |
267 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
112982 |
tatccttatcattctagataacatatggaccatacttgatttgaaagaagtggggataccagttggtgatgaacataatggttgcaaattgttgatgaca |
113081 |
T |
|
| Q |
268 |
agtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctttcaaagttgaacttatgagtgaaaatga |
347 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
113082 |
agtagaaatcaagatgtgttgctgcaaatggatgttccaaaggatttcactttcaaagttgaagttatgagtgaaaatga |
113161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 36 - 344
Target Start/End: Original strand, 21811332 - 21811640
Alignment:
| Q |
36 |
agaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagaggagagtattctcggcagagcagaa |
135 |
Q |
| |
|
|||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | |
|
|
| T |
21811332 |
agaagtatcgaaaaatccagactttaaaaagattcaaggggagattgcagatttcttgggtctgcgatttgaagaggagactattcttggcagagcacat |
21811431 |
T |
|
| Q |
136 |
cgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtggggatatcagttggta |
235 |
Q |
| |
|
||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
21811432 |
cgcctaagacaaagaatcaagatggagaaaagtatccttatcattctagataacatatggaccatacttgattggaaagaagtggggataccagttggtg |
21811531 |
T |
|
| Q |
236 |
atgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctttcaaagttgaacttat |
335 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||| ||| |||||||||||| |||||||||||||| |||| |
|
|
| T |
21811532 |
atgaacataatggttgcaaattgttgatgacaagtagagatcaaggtctgttgctgcaaatgggtgttccaaaggatttcactttcaaagttgaagttat |
21811631 |
T |
|
| Q |
336 |
gagtgaaaa |
344 |
Q |
| |
|
||||||||| |
|
|
| T |
21811632 |
gagtgaaaa |
21811640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 76 - 347
Target Start/End: Complemental strand, 22287141 - 22286870
Alignment:
| Q |
76 |
gagattgcagatttcttgggtctgcgatttgaagaggagagtattctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtcctta |
175 |
Q |
| |
|
||||||||||||| |||||| ||| ||| | ||||||| | |||| ||||||||| | ||||| ||||| |||||||||||||||| || | ||||| |
|
|
| T |
22287141 |
gagattgcagattctttgggtttgcaattcgttgaggagactgttcttggcagagcaaatcgcctaagacagagaatcaagatggagaaaaatatccttg |
22287042 |
T |
|
| Q |
176 |
tcattctagataacatatggaccatacttgatttgaaagaagtggggatatcagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaa |
275 |
Q |
| |
|
||||| ||||| | || |||| |||||||||||||| ||||||| || || |||| ||| |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
22287041 |
tcattttagatgatatttggagtatacttgatttgaagaaagtgggaattccatttggaaataaacataatggttgcaaattgttgatgactagtagaaa |
22286942 |
T |
|
| Q |
276 |
tcaagatgtgttgctgcaaatggatgtcccaaaggatttctctttcaaagttgaacttatgagtgaaaatga |
347 |
Q |
| |
|
|||||||||||| || |||||||||| |||| ||| ||| |||||||| |||||||||||| ||||||||| |
|
|
| T |
22286941 |
tcaagatgtgttacttaaaatggatgttccaatggagttcactttcaaacttgaacttatgattgaaaatga |
22286870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 20 - 344
Target Start/End: Original strand, 23513 - 23837
Alignment:
| Q |
20 |
ataaagtggttatcacagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagaggagagtat |
119 |
Q |
| |
|
|||||||||||| |||||||| || ||||||||||||||| |||||| ||||||||||||||||||| || |||||||||||||||||| ||| |
|
|
| T |
23513 |
ataaagtggttaagacagaagtttctaaaaatccagacattaaaagaattcaaggggagattgcagatttcttgagtatgcgatttgaagaggagactat |
23612 |
T |
|
| Q |
120 |
tctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtg |
219 |
Q |
| |
|
| | ||||||||| ||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
23613 |
tgttggcagagcacaacgcctaagacaaagaatcaagatggagaaaagcatccttatcattctagataacatatggaccaaacttgatttgaaagaagta |
23712 |
T |
|
| Q |
220 |
gggatatcagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctt |
319 |
Q |
| |
|
||||| || |||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||| ||||||||||||| |||||||||| | ||| |
|
|
| T |
23713 |
gggattccatttggtaatgaacataatggttgcaaattgttgatgacatgcagaaatcaagaagtgttgttgcaaatggatgttccaaaggattacactt |
23812 |
T |
|
| Q |
320 |
tcaaagttgaacttatgagtgaaaa |
344 |
Q |
| |
|
|||||||| |||||||||||||||| |
|
|
| T |
23813 |
tcaaagttaaacttatgagtgaaaa |
23837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 184; Significance: 2e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 20 - 344
Target Start/End: Complemental strand, 38060789 - 38060465
Alignment:
| Q |
20 |
ataaagtggttatcacagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagaggagagtat |
119 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||| || ||||||| |||||||||| ||| |
|
|
| T |
38060789 |
ataaagtggttaaggcagaagtatcgaaaaatccagacattaaaagaattcaaggggagattgcagatttcttgagtatgcgattagaagaggagactat |
38060690 |
T |
|
| Q |
120 |
tctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtg |
219 |
Q |
| |
|
| | ||||||||| |||| || |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
38060689 |
tattggcagagcacaacgactaagacaaagaatcaagatggagaaaagtatccttatcattctagataacatatggaccatacttgatttgaaaaaagta |
38060590 |
T |
|
| Q |
220 |
gggatatcagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctt |
319 |
Q |
| |
|
||||| || | | ||| ||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| |||||||||||| ||| |
|
|
| T |
38060589 |
gggattccatatagaaataaacataatggttgcaaattgttgatgacatgcagaaatcaagaagtgttgctgcaaatggatgttccaaaggatttcactt |
38060490 |
T |
|
| Q |
320 |
tcaaagttgaacttatgagtgaaaa |
344 |
Q |
| |
|
||||||||||||||||||| ||||| |
|
|
| T |
38060489 |
tcaaagttgaacttatgagcgaaaa |
38060465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0406 (Bit Score: 175; Significance: 4e-94; HSPs: 1)
Name: scaffold0406
Description:
Target: scaffold0406; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 37 - 344
Target Start/End: Complemental strand, 11235 - 10928
Alignment:
| Q |
37 |
gaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagaggagagtattctcggcagagcagaac |
136 |
Q |
| |
|
|||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||| |||| |||| ||||| |||||| ||||||||||||| |
|
|
| T |
11235 |
gaagtatcaaaaaatccagacattaaaataattcaaggggagattgcagatttcttgggtctgtgattcgaaggggagactattcttggcagagcagaac |
11136 |
T |
|
| Q |
137 |
gccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtggggatatcagttggtaa |
236 |
Q |
| |
|
|||| |||||||||||||||||||||| |||| || ||||||||||||||||| |||||| ||||||||||||| || ||| ||||| || |||| || |
|
|
| T |
11135 |
gcctaagacaaagaatcaagatggagaaaagtatcattatcattctagataacttatggagcatacttgatttggaaatagtagggattccatttggcaa |
11036 |
T |
|
| Q |
237 |
tgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctttcaaagttgaacttatg |
336 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||| || |||||||| ||||||||||| |||||||||||| ||||||||||| |||||||| |
|
|
| T |
11035 |
tgaacataatggttgcaaattgttgatgacaagtagagatcaggaagtgttgcttcaaatggatgttccaaaggatttcactttcaaagttcaacttatg |
10936 |
T |
|
| Q |
337 |
agtgaaaa |
344 |
Q |
| |
|
|||||||| |
|
|
| T |
10935 |
agtgaaaa |
10928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1514 (Bit Score: 161; Significance: 8e-86; HSPs: 1)
Name: scaffold1514
Description:
Target: scaffold1514; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 140 - 344
Target Start/End: Original strand, 1 - 205
Alignment:
| Q |
140 |
ttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtggggatatcagttggtaatga |
239 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||| |
|
|
| T |
1 |
ttagacaaagaatcaagatggagaaaagtatccttatcattctagataacatatggaccatacttgttttgaaagaagtggggataccagttggtgatga |
100 |
T |
|
| Q |
240 |
acataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctttcaaagttgaacttatgagt |
339 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
101 |
acataatggttgcaaattgttgatgacaagtagagatcaagaagtgttactgcaaatggatgttccaaaggagttcactttcaaagttgaacttatgagt |
200 |
T |
|
| Q |
340 |
gaaaa |
344 |
Q |
| |
|
||||| |
|
|
| T |
201 |
gaaaa |
205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0068 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0068
Description:
Target: scaffold0068; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 20 - 344
Target Start/End: Complemental strand, 44192 - 43868
Alignment:
| Q |
20 |
ataaagtggttatcacagaagtatcgaaaaatccagacattnnnnnnnttcaagcggagattgcagatttcttgggtctgcgatttgaagaggagagtat |
119 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||| |||| |||||| |||||||||||||| ||| ||| ||||| |||||| || ||| |
|
|
| T |
44192 |
ataatgtggttatgacagaagtatcgaaaaatccaaacatcaaattaattcaagatgagattgcagattttttgaatctacgattcgaagagacgactat |
44093 |
T |
|
| Q |
120 |
tctcggcagagcagaacgccttagacaaagaatcaagatggagagaagtgtccttatcattctagataacatatggaccatacttgatttgaaagaagtg |
219 |
Q |
| |
|
||| ||||||||| ||||||| || || |||||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||||||| ||| |
|
|
| T |
44092 |
tcttggcagagcacaacgcctaaggcagagaatcaagatggagaaaagtatccttatcattctagataatgtatggaccaaacttgatttgaaaattgtg |
43993 |
T |
|
| Q |
220 |
gggatatcagttggtaatgaacataatggttgcaaattgttgatgacaagtagaaatcaagatgtgttgctgcaaatggatgtcccaaaggatttctctt |
319 |
Q |
| |
|
||||| || |||| || |||||||| ||||||||||||||||||||||||||||||| || |||||||| ||||||||||| ||||||||||| ||| |
|
|
| T |
43992 |
gggattccatttggcaaagaacataaaagttgcaaattgttgatgacaagtagaaatcaggaagtgttgcttcaaatggatgttccaaaggattttactt |
43893 |
T |
|
| Q |
320 |
tcaaagttgaacttatgagtgaaaa |
344 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
43892 |
tcaaagttgaacttatgagtgaaaa |
43868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0238 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0238
Description:
Target: scaffold0238; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 344
Target Start/End: Complemental strand, 19090 - 19050
Alignment:
| Q |
304 |
ccaaaggatttctctttcaaagttgaacttatgagtgaaaa |
344 |
Q |
| |
|
|||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
19090 |
ccaaagaattttactttcaaagttgaacttatgagtgaaaa |
19050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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