View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17675_low_12 (Length: 249)
Name: NF17675_low_12
Description: NF17675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17675_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 21 - 243
Target Start/End: Original strand, 43060066 - 43060292
Alignment:
| Q |
21 |
ttttattgcagaggtgtttttgttgagcaggctggaagtaatgtggcattatttttgcatcttttacaagttttaggatttttgtttaatttgttgcaaa |
120 |
Q |
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| T |
43060066 |
ttttattgcagaggtgtttttgttgagcaggctggaagtaatgtggcattatttttgcatcttttacaagttttaggatttttgtttaatttgttgcaaa |
43060165 |
T |
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| Q |
121 |
tgcatccttattgtgaagtgtgctctttttgtttat----gatatttcttctgctgacaatgtgattaatttattggcgtttggcaagctcaaattcatg |
216 |
Q |
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| T |
43060166 |
tgcatccttattgtgcagtgtgctctttttgtttatataagatatttcttctgctgacaatgtgattaatttattggcgtttggcaagctcaaattaatt |
43060265 |
T |
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| Q |
217 |
tgtgatgtatctatctaattgtttatt |
243 |
Q |
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| T |
43060266 |
tgtgatgtatctatctaattgtttatt |
43060292 |
T |
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