View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17678_low_20 (Length: 226)

Name: NF17678_low_20
Description: NF17678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17678_low_20
NF17678_low_20
[»] chr1 (75 HSPs)
chr1 (25-196)||(40714499-40714671)
chr1 (25-196)||(28324859-28325031)
chr1 (25-196)||(45750041-45750213)
chr1 (25-191)||(49955402-49955569)
chr1 (40-196)||(31058256-31058412)
chr1 (42-196)||(8898590-8898744)
chr1 (25-196)||(35038510-35038682)
chr1 (25-154)||(49955588-49955718)
chr1 (25-154)||(35040855-35040985)
chr1 (25-154)||(17189009-17189139)
chr1 (25-153)||(12905901-12906030)
chr1 (42-154)||(7371363-7371475)
chr1 (25-154)||(45749897-45750027)
chr1 (41-154)||(8898758-8898871)
chr1 (25-153)||(20760747-20760876)
chr1 (25-154)||(40714685-40714814)
chr1 (42-146)||(30326569-30326673)
chr1 (28-146)||(37929476-37929595)
chr1 (40-146)||(28325053-28325159)
chr1 (25-137)||(31051005-31051118)
chr1 (25-146)||(32132359-32132481)
chr1 (40-106)||(34464520-34464586)
chr1 (25-106)||(7821009-7821091)
chr1 (26-106)||(17662141-17662222)
chr1 (25-148)||(5734064-5734188)
chr1 (93-148)||(46282195-46282250)
chr1 (93-148)||(49093165-49093220)
chr1 (93-148)||(49093734-49093789)
chr1 (25-106)||(6367617-6367699)
chr1 (25-77)||(1103516-1103569)
chr1 (25-77)||(36694568-36694621)
chr1 (25-77)||(36710669-36710722)
chr1 (25-77)||(46163085-46163138)
chr1 (25-104)||(1841514-1841594)
chr1 (25-76)||(41098788-41098840)
chr1 (40-80)||(44523453-44523493)
chr1 (39-106)||(4960610-4960677)
chr1 (93-148)||(46282714-46282769)
chr1 (93-148)||(50062327-50062382)
chr1 (25-106)||(25647939-25648021)
chr1 (25-106)||(26024478-26024560)
chr1 (60-106)||(32917551-32917597)
chr1 (25-106)||(37578483-37578565)
chr1 (40-106)||(40210661-40210727)
chr1 (40-106)||(42248544-42248610)
chr1 (25-77)||(13914387-13914440)
chr1 (40-77)||(14879042-14879079)
chr1 (25-73)||(17189173-17189222)
chr1 (40-77)||(24009861-24009898)
chr1 (25-77)||(40772562-40772615)
chr1 (92-148)||(13295258-13295314)
chr1 (26-77)||(30711383-30711435)
chr1 (93-148)||(50062869-50062924)
chr1 (25-106)||(183482-183564)
chr1 (145-191)||(30326700-30326746)
chr1 (60-106)||(30711618-30711664)
chr1 (60-110)||(40210461-40210511)
chr1 (60-106)||(49723017-49723063)
chr1 (25-77)||(19515874-19515927)
chr1 (25-77)||(23209647-23209700)
chr1 (25-77)||(32917315-32917368)
chr1 (25-77)||(43758877-43758930)
chr1 (40-76)||(19017950-19017986)
chr1 (40-76)||(34464770-34464806)
chr1 (41-76)||(35152415-35152450)
chr1 (60-106)||(1841750-1841796)
chr1 (60-106)||(6367853-6367899)
chr1 (60-106)||(14879262-14879308)
chr1 (60-98)||(24009666-24009704)
chr1 (60-98)||(41099032-41099070)
chr1 (103-145)||(46899852-46899894)
chr1 (60-106)||(48779410-48779456)
chr1 (25-77)||(17691274-17691327)
chr1 (108-145)||(46899200-46899237)
chr1 (26-77)||(32558425-32558477)
[»] scaffold0328 (2 HSPs)
scaffold0328 (25-196)||(11339-11511)
scaffold0328 (40-154)||(11211-11325)
[»] chr7 (83 HSPs)
chr7 (25-196)||(25628533-25628705)
chr7 (25-196)||(32068295-32068467)
chr7 (25-196)||(32934547-32934719)
chr7 (25-196)||(42618110-42618282)
chr7 (25-196)||(43266321-43266493)
chr7 (25-196)||(46205508-46205680)
chr7 (25-196)||(23058628-23058800)
chr7 (25-196)||(10600148-10600320)
chr7 (40-196)||(22081630-22081786)
chr7 (27-196)||(25453327-25453497)
chr7 (25-143)||(22081811-22081930)
chr7 (25-154)||(25628719-25628849)
chr7 (25-154)||(32068151-32068281)
chr7 (25-157)||(28890634-28890767)
chr7 (26-154)||(42617967-42618096)
chr7 (25-148)||(32934403-32934527)
chr7 (25-148)||(33828221-33828345)
chr7 (26-148)||(25453184-25453307)
chr7 (25-154)||(27138182-27138312)
chr7 (25-147)||(43266514-43266637)
chr7 (25-144)||(39274925-39275045)
chr7 (46-148)||(43124401-43124503)
chr7 (40-147)||(23058500-23058607)
chr7 (25-148)||(18855903-18856027)
chr7 (25-147)||(46204476-46204599)
chr7 (60-158)||(4226216-4226314)
chr7 (60-148)||(18087587-18087675)
chr7 (58-148)||(5455916-5456006)
chr7 (58-148)||(12228474-12228564)
chr7 (50-148)||(33808404-33808502)
chr7 (92-159)||(45914647-45914714)
chr7 (25-77)||(28469328-28469381)
chr7 (25-76)||(6571068-6571120)
chr7 (39-147)||(29144232-29144340)
chr7 (60-148)||(32688467-32688555)
chr7 (25-80)||(48789120-48789176)
chr7 (93-148)||(22661481-22661536)
chr7 (93-148)||(27480111-27480166)
chr7 (25-106)||(19204544-19204626)
chr7 (25-77)||(10935849-10935902)
chr7 (39-148)||(18086359-18086468)
chr7 (92-151)||(4227090-4227149)
chr7 (93-148)||(27480668-27480723)
chr7 (39-106)||(45010895-45010962)
chr7 (92-158)||(12644044-12644110)
chr7 (25-106)||(17102075-17102157)
chr7 (39-77)||(22871597-22871635)
chr7 (25-106)||(27991794-27991876)
chr7 (25-106)||(32298996-32299078)
chr7 (92-158)||(47558153-47558219)
chr7 (40-77)||(2640498-2640535)
chr7 (25-77)||(6253526-6253579)
chr7 (40-77)||(23181314-23181351)
chr7 (60-105)||(27396720-27396765)
chr7 (25-77)||(42731474-42731527)
chr7 (60-104)||(3914431-3914475)
chr7 (92-148)||(12643223-12643279)
chr7 (26-77)||(32053463-32053515)
chr7 (29-104)||(42362509-42362585)
chr7 (40-75)||(16803967-16804002)
chr7 (25-147)||(32687452-32687575)
chr7 (108-158)||(13384641-13384691)
chr7 (108-158)||(47945487-47945537)
chr7 (108-158)||(47950917-47950967)
chr7 (60-98)||(48788894-48788932)
chr7 (40-105)||(3914209-3914274)
chr7 (24-104)||(13044726-13044807)
chr7 (60-105)||(32053234-32053279)
chr7 (40-77)||(45010669-45010706)
chr7 (60-103)||(28469101-28469144)
chr7 (62-105)||(32298863-32298906)
chr7 (39-106)||(40379839-40379906)
chr7 (60-106)||(2640269-2640315)
chr7 (25-73)||(13050104-13050154)
chr7 (60-106)||(19204749-19204795)
chr7 (25-106)||(27396886-27396968)
chr7 (60-106)||(42731710-42731756)
chr7 (29-77)||(5457227-5457276)
chr7 (60-105)||(6571240-6571285)
chr7 (40-77)||(24388890-24388927)
chr7 (25-77)||(37656907-37656960)
chr7 (40-77)||(42019917-42019954)
chr7 (107-148)||(47558988-47559029)
[»] chr8 (71 HSPs)
chr8 (25-196)||(15230130-15230302)
chr8 (25-196)||(44664563-44664735)
chr8 (40-196)||(25124762-25124918)
chr8 (25-187)||(42945322-42945485)
chr8 (26-196)||(6471746-6471917)
chr8 (25-196)||(21432892-21433064)
chr8 (33-196)||(41353773-41353936)
chr8 (25-153)||(10445577-10445706)
chr8 (25-148)||(35634346-35634470)
chr8 (25-146)||(44664757-44664879)
chr8 (60-196)||(27500287-27500423)
chr8 (42-178)||(37542442-37542578)
chr8 (40-156)||(39474617-39474732)
chr8 (33-154)||(42945177-42945299)
chr8 (25-141)||(8997943-8998060)
chr8 (41-154)||(21432765-21432878)
chr8 (26-154)||(37542280-37542409)
chr8 (25-148)||(15229986-15230110)
chr8 (25-147)||(25124618-25124741)
chr8 (25-154)||(6471931-6472061)
chr8 (25-154)||(41353629-41353759)
chr8 (25-147)||(2535800-2535923)
chr8 (49-148)||(34177219-34177318)
chr8 (121-202)||(7983621-7983702)
chr8 (25-147)||(7983483-7983606)
chr8 (50-148)||(34176522-34176620)
chr8 (41-154)||(38003527-38003640)
chr8 (109-182)||(38003667-38003740)
chr8 (52-154)||(27500172-27500273)
chr8 (49-146)||(7294181-7294278)
chr8 (25-148)||(2534750-2534874)
chr8 (25-98)||(234037-234111)
chr8 (25-98)||(710448-710522)
chr8 (25-98)||(747660-747734)
chr8 (25-98)||(871555-871629)
chr8 (92-148)||(11761963-11762019)
chr8 (92-148)||(34213887-34213943)
chr8 (93-148)||(34665894-34665949)
chr8 (25-106)||(8316879-8316961)
chr8 (25-106)||(13186115-13186197)
chr8 (25-106)||(23663805-23663887)
chr8 (25-106)||(36928531-36928613)
chr8 (25-77)||(12273173-12273226)
chr8 (25-77)||(23698564-23698617)
chr8 (25-77)||(39071731-39071784)
chr8 (25-77)||(40318284-40318337)
chr8 (93-148)||(34214449-34214504)
chr8 (93-148)||(34666462-34666517)
chr8 (40-106)||(16388817-16388883)
chr8 (25-77)||(4994977-4995030)
chr8 (26-77)||(36186387-36186439)
chr8 (25-80)||(38955758-38955814)
chr8 (31-77)||(4405980-4406027)
chr8 (40-75)||(22915680-22915715)
chr8 (39-106)||(31608804-31608871)
chr8 (40-106)||(1425313-1425379)
chr8 (39-104)||(34061621-34061686)
chr8 (40-73)||(42803542-42803575)
chr8 (42-77)||(38862691-38862726)
chr8 (60-106)||(1425144-1425190)
chr8 (60-106)||(13186350-13186396)
chr8 (60-106)||(23663636-23663682)
chr8 (60-98)||(34685557-34685595)
chr8 (25-106)||(36325494-36325576)
chr8 (60-106)||(36928767-36928813)
chr8 (60-106)||(40318055-40318101)
chr8 (60-105)||(8316744-8316789)
chr8 (49-106)||(31608593-31608650)
chr8 (33-77)||(35756645-35756690)
chr8 (60-105)||(38862855-38862900)
chr8 (60-105)||(39071934-39071979)
[»] chr4 (91 HSPs)
chr4 (25-196)||(27068965-27069137)
chr4 (25-196)||(52573283-52573455)
chr4 (25-189)||(54858615-54858780)
chr4 (25-196)||(10408088-10408260)
chr4 (25-196)||(22718138-22718310)
chr4 (25-196)||(39666975-39667147)
chr4 (40-196)||(51859478-51859634)
chr4 (25-196)||(22986906-22987078)
chr4 (40-196)||(27891655-27891811)
chr4 (25-196)||(50504024-50504196)
chr4 (25-196)||(39700964-39701136)
chr4 (40-189)||(45463279-45463428)
chr4 (25-196)||(9731411-9731583)
chr4 (25-154)||(50503880-50504010)
chr4 (25-154)||(11524004-11524134)
chr4 (25-154)||(45463128-45463258)
chr4 (25-154)||(54858801-54858931)
chr4 (25-146)||(5818024-5818146)
chr4 (25-154)||(39701150-39701280)
chr4 (25-147)||(3032637-3032760)
chr4 (40-154)||(27069151-27069265)
chr4 (25-148)||(10407944-10408068)
chr4 (112-196)||(11524148-11524232)
chr4 (25-143)||(51859658-51859777)
chr4 (40-154)||(52573469-52573583)
chr4 (45-154)||(39666852-39666961)
chr4 (25-148)||(55867363-55867487)
chr4 (25-154)||(22717994-22718124)
chr4 (25-118)||(22923193-22923287)
chr4 (25-118)||(22927846-22927940)
chr4 (25-118)||(22984125-22984219)
chr4 (25-154)||(22987092-22987222)
chr4 (25-118)||(22997713-22997807)
chr4 (25-158)||(32063575-32063709)
chr4 (25-148)||(11447978-11448102)
chr4 (92-148)||(23455077-23455133)
chr4 (25-158)||(30641573-30641706)
chr4 (25-145)||(50751750-50751871)
chr4 (92-148)||(23455610-23455666)
chr4 (39-106)||(35028289-35028356)
chr4 (93-148)||(38982517-38982572)
chr4 (93-148)||(52815787-52815842)
chr4 (93-148)||(52816344-52816399)
chr4 (93-148)||(56556706-56556761)
chr4 (25-158)||(40316902-40317036)
chr4 (25-158)||(40326976-40327110)
chr4 (25-106)||(49879467-49879549)
chr4 (100-145)||(147450-147495)
chr4 (25-77)||(7451889-7451942)
chr4 (40-93)||(27149298-27149351)
chr4 (25-77)||(37248291-37248344)
chr4 (25-77)||(52909308-52909361)
chr4 (25-77)||(54087015-54087068)
chr4 (93-148)||(56557246-56557301)
chr4 (25-106)||(14801791-14801873)
chr4 (25-106)||(18831404-18831486)
chr4 (25-106)||(34765671-34765753)
chr4 (25-106)||(36009104-36009186)
chr4 (25-77)||(24711166-24711219)
chr4 (25-77)||(35508560-35508613)
chr4 (25-77)||(44967358-44967411)
chr4 (25-117)||(50750942-50751035)
chr4 (25-77)||(51692608-51692661)
chr4 (144-196)||(3032781-3032833)
chr4 (25-76)||(5369002-5369054)
chr4 (50-106)||(17356006-17356062)
chr4 (26-77)||(50418957-50419009)
chr4 (25-106)||(13058092-13058174)
chr4 (60-98)||(18831616-18831654)
chr4 (40-106)||(23613380-23613446)
chr4 (60-106)||(37976244-37976290)
chr4 (25-106)||(43155787-43155869)
chr4 (33-106)||(53701875-53701949)
chr4 (60-106)||(53702103-53702149)
chr4 (60-105)||(1179092-1179137)
chr4 (25-77)||(15507993-15508046)
chr4 (25-77)||(16605657-16605710)
chr4 (93-146)||(38813678-38813731)
chr4 (25-72)||(24411413-24411461)
chr4 (25-104)||(37976446-37976526)
chr4 (28-106)||(24711371-24711450)
chr4 (93-148)||(38814248-38814303)
chr4 (103-145)||(148007-148049)
chr4 (50-148)||(39538161-39538259)
chr4 (60-106)||(43155620-43155666)
chr4 (60-106)||(46661205-46661251)
chr4 (25-106)||(50418723-50418805)
chr4 (60-105)||(14802027-14802072)
chr4 (40-77)||(17356242-17356279)
chr4 (25-77)||(39539238-39539291)
chr4 (25-77)||(53129826-53129879)
[»] chr6 (51 HSPs)
chr6 (25-196)||(22502973-22503145)
chr6 (25-191)||(21836086-21836252)
chr6 (25-196)||(7160859-7161031)
chr6 (25-196)||(31407077-31407249)
chr6 (40-191)||(7905447-7905598)
chr6 (45-196)||(15913747-15913898)
chr6 (40-196)||(12065290-12065447)
chr6 (25-154)||(7905298-7905428)
chr6 (25-146)||(21836279-21836401)
chr6 (25-148)||(22502829-22502953)
chr6 (33-154)||(7161045-7161167)
chr6 (42-154)||(15913621-15913733)
chr6 (25-146)||(6517558-6517679)
chr6 (26-148)||(8089499-8089622)
chr6 (25-146)||(10781407-10781529)
chr6 (25-154)||(31406933-31407063)
chr6 (63-196)||(10781248-10781385)
chr6 (93-148)||(14657130-14657185)
chr6 (93-148)||(33400090-33400145)
chr6 (25-77)||(3059312-3059365)
chr6 (100-145)||(20651141-20651186)
chr6 (25-77)||(30803916-30803969)
chr6 (25-77)||(33517589-33517642)
chr6 (92-148)||(4117468-4117524)
chr6 (25-76)||(21628034-21628086)
chr6 (26-104)||(32593546-32593625)
chr6 (59-125)||(139883-139949)
chr6 (59-125)||(147904-147970)
chr6 (42-104)||(11392911-11392973)
chr6 (25-106)||(30337504-30337586)
chr6 (25-77)||(30725814-30725867)
chr6 (92-148)||(14656603-14656659)
chr6 (25-76)||(17734484-17734536)
chr6 (40-77)||(12080707-12080744)
chr6 (60-145)||(20651899-20651984)
chr6 (100-148)||(33401046-33401095)
chr6 (25-77)||(33647018-33647071)
chr6 (108-148)||(1661351-1661391)
chr6 (60-104)||(3059549-3059593)
chr6 (99-151)||(3176301-3176353)
chr6 (92-148)||(4116922-4116978)
chr6 (60-106)||(21627804-21627850)
chr6 (60-106)||(30726050-30726096)
chr6 (60-106)||(30804152-30804198)
chr6 (114-148)||(33400875-33400909)
chr6 (60-106)||(33517825-33517871)
chr6 (60-105)||(11393096-11393141)
chr6 (108-145)||(13379734-13379771)
chr6 (29-77)||(26463238-26463287)
chr6 (26-117)||(15115395-15115487)
chr6 (40-80)||(24210602-24210642)
[»] chr5 (80 HSPs)
chr5 (25-196)||(17544247-17544419)
chr5 (40-196)||(20153117-20153273)
chr5 (40-196)||(33871538-33871693)
chr5 (33-154)||(17544111-17544233)
chr5 (40-154)||(22298613-22298727)
chr5 (40-154)||(33871410-33871524)
chr5 (25-138)||(8875504-8875618)
chr5 (47-148)||(21287904-21288005)
chr5 (25-154)||(20152836-20152965)
chr5 (40-131)||(21287814-21287905)
chr5 (49-158)||(11741756-11741865)
chr5 (25-106)||(19892599-19892681)
chr5 (86-154)||(20153035-20153103)
chr5 (25-98)||(5255073-5255146)
chr5 (92-157)||(22870374-22870439)
chr5 (25-77)||(38475319-38475372)
chr5 (92-148)||(22869728-22869784)
chr5 (26-76)||(16157176-16157227)
chr5 (93-148)||(20072245-20072300)
chr5 (93-148)||(20072790-20072845)
chr5 (93-148)||(36477297-36477352)
chr5 (93-148)||(39181717-39181772)
chr5 (25-106)||(11761804-11761886)
chr5 (25-77)||(16083032-16083085)
chr5 (25-77)||(29646682-29646735)
chr5 (25-77)||(35512203-35512256)
chr5 (25-77)||(39453355-39453408)
chr5 (182-226)||(2467878-2467922)
chr5 (40-104)||(18670270-18670334)
chr5 (25-76)||(20840588-20840640)
chr5 (26-77)||(24547445-24547497)
chr5 (93-148)||(16533546-16533601)
chr5 (93-148)||(36476889-36476944)
chr5 (93-148)||(39181181-39181236)
chr5 (25-106)||(3529133-3529215)
chr5 (25-77)||(5024338-5024391)
chr5 (40-77)||(5993960-5993997)
chr5 (40-77)||(11047508-11047545)
chr5 (40-77)||(14194743-14194780)
chr5 (25-77)||(17202454-17202507)
chr5 (92-148)||(20857055-20857112)
chr5 (25-77)||(38442123-38442176)
chr5 (40-76)||(13362549-13362585)
chr5 (25-76)||(20814456-20814508)
chr5 (140-196)||(22298741-22298797)
chr5 (41-77)||(28269708-28269744)
chr5 (42-77)||(13962937-13962972)
chr5 (93-148)||(16533017-16533072)
chr5 (139-182)||(20152991-20153034)
chr5 (60-106)||(17202690-17202736)
chr5 (60-106)||(18670456-18670502)
chr5 (33-98)||(30005216-30005282)
chr5 (40-106)||(32242313-32242379)
chr5 (60-106)||(38475124-38475170)
chr5 (25-77)||(186474-186527)
chr5 (40-77)||(8322475-8322512)
chr5 (92-148)||(20857467-20857524)
chr5 (108-145)||(21257413-21257450)
chr5 (25-77)||(27587203-27587256)
chr5 (25-77)||(35920504-35920557)
chr5 (33-104)||(6150517-6150589)
chr5 (25-80)||(24141507-24141563)
chr5 (60-106)||(186710-186756)
chr5 (60-106)||(6150711-6150757)
chr5 (60-106)||(11047728-11047774)
chr5 (60-106)||(16156946-16156992)
chr5 (60-106)||(20814226-20814272)
chr5 (60-98)||(27937144-27937182)
chr5 (60-106)||(28269513-28269559)
chr5 (60-106)||(29646453-29646499)
chr5 (60-106)||(39453590-39453636)
chr5 (60-106)||(43159105-43159151)
chr5 (60-105)||(14194514-14194559)
chr5 (40-77)||(18247155-18247192)
chr5 (44-77)||(21265461-21265494)
chr5 (60-105)||(24547281-24547326)
chr5 (40-77)||(28771158-28771195)
chr5 (60-105)||(35512406-35512451)
chr5 (60-104)||(5994182-5994226)
chr5 (60-104)||(16083236-16083280)
[»] chr3 (82 HSPs)
chr3 (40-196)||(3469271-3469427)
chr3 (25-196)||(11910754-11910926)
chr3 (25-196)||(40788619-40788791)
chr3 (25-184)||(52032193-52032353)
chr3 (25-183)||(29118750-29118909)
chr3 (25-196)||(29685996-29686168)
chr3 (40-180)||(47551564-47551704)
chr3 (25-202)||(32306479-32306657)
chr3 (40-179)||(37778489-37778628)
chr3 (25-153)||(35643906-35644035)
chr3 (25-153)||(41422027-41422156)
chr3 (25-148)||(32306671-32306795)
chr3 (25-154)||(3469441-3469571)
chr3 (40-148)||(13948851-13948959)
chr3 (73-191)||(3596313-3596431)
chr3 (25-154)||(10307616-10307746)
chr3 (25-146)||(43998200-43998322)
chr3 (25-154)||(3596164-3596294)
chr3 (25-154)||(10294801-10294930)
chr3 (25-154)||(52032380-52032510)
chr3 (49-154)||(29118618-29118723)
chr3 (41-196)||(10294639-10294787)
chr3 (40-154)||(29686182-29686295)
chr3 (41-148)||(40788492-40788599)
chr3 (25-148)||(9368550-9368674)
chr3 (25-148)||(47857494-47857618)
chr3 (108-196)||(43998344-43998432)
chr3 (128-196)||(13948979-13949047)
chr3 (92-148)||(32716372-32716428)
chr3 (25-148)||(47856442-47856566)
chr3 (25-145)||(4322646-4322767)
chr3 (92-148)||(2944036-2944092)
chr3 (93-148)||(1756674-1756729)
chr3 (93-148)||(2944587-2944642)
chr3 (93-148)||(37249719-37249774)
chr3 (93-148)||(45278668-45278723)
chr3 (93-148)||(45279205-45279260)
chr3 (93-148)||(48189020-48189075)
chr3 (25-106)||(2796234-2796316)
chr3 (26-158)||(6956304-6956438)
chr3 (94-148)||(11026553-11026607)
chr3 (25-77)||(23458299-23458352)
chr3 (25-77)||(43384338-43384391)
chr3 (26-77)||(9294278-9294330)
chr3 (60-148)||(32717026-32717114)
chr3 (93-148)||(1757225-1757280)
chr3 (93-148)||(37249323-37249378)
chr3 (49-148)||(42855554-42855653)
chr3 (93-148)||(43105357-43105412)
chr3 (93-148)||(48188502-48188557)
chr3 (25-147)||(1078592-1078714)
chr3 (40-106)||(19741183-19741249)
chr3 (25-106)||(33689670-33689752)
chr3 (25-117)||(4323482-4323575)
chr3 (92-157)||(29192905-29192970)
chr3 (25-77)||(33156314-33156367)
chr3 (25-77)||(40506107-40506160)
chr3 (25-77)||(40758202-40758252)
chr3 (40-77)||(42342862-42342899)
chr3 (25-77)||(53756799-53756852)
chr3 (108-148)||(35759050-35759090)
chr3 (40-76)||(40033777-40033813)
chr3 (25-148)||(43608731-43608855)
chr3 (93-148)||(43105755-43105810)
chr3 (40-106)||(51994177-51994243)
chr3 (25-93)||(33506252-33506321)
chr3 (110-151)||(41989534-41989575)
chr3 (25-77)||(55052568-55052621)
chr3 (92-148)||(11026060-11026116)
chr3 (41-77)||(26463918-26463954)
chr3 (92-148)||(29192158-29192214)
chr3 (40-76)||(46474886-46474922)
chr3 (153-196)||(10307559-10307602)
chr3 (50-105)||(42343023-42343078)
chr3 (60-106)||(19741014-19741060)
chr3 (60-106)||(23458070-23458116)
chr3 (60-98)||(40033597-40033635)
chr3 (60-106)||(46475072-46475118)
chr3 (60-105)||(40758402-40758447)
chr3 (60-141)||(41558138-41558219)
chr3 (49-78)||(44960257-44960286)
chr3 (60-104)||(26463723-26463767)
[»] chr2 (53 HSPs)
chr2 (25-196)||(8710667-8710839)
chr2 (25-184)||(15604550-15604710)
chr2 (41-196)||(11830436-11830591)
chr2 (25-205)||(41587289-41587470)
chr2 (25-148)||(15604394-15604518)
chr2 (40-154)||(8342258-8342372)
chr2 (40-154)||(41588299-41588413)
chr2 (25-148)||(39936496-39936620)
chr2 (25-133)||(28226006-28226115)
chr2 (49-148)||(6588763-6588862)
chr2 (33-190)||(8342392-8342542)
chr2 (25-158)||(202595-202729)
chr2 (60-148)||(25623379-25623467)
chr2 (92-148)||(29957940-29957996)
chr2 (60-158)||(25624344-25624442)
chr2 (26-106)||(36382217-36382298)
chr2 (92-148)||(29958468-29958524)
chr2 (26-80)||(10712779-10712834)
chr2 (93-148)||(20983182-20983237)
chr2 (93-148)||(21103205-21103260)
chr2 (25-77)||(22051313-22051366)
chr2 (108-148)||(8710607-8710647)
chr2 (49-148)||(3555330-3555429)
chr2 (93-148)||(20982648-20982703)
chr2 (25-106)||(15848143-15848225)
chr2 (25-106)||(37895638-37895720)
chr2 (25-106)||(39498365-39498447)
chr2 (40-77)||(2318229-2318266)
chr2 (40-77)||(44714081-44714118)
chr2 (40-106)||(6657949-6658015)
chr2 (40-106)||(16099126-16099192)
chr2 (60-106)||(37895438-37895484)
chr2 (25-73)||(6573598-6573647)
chr2 (60-105)||(9076359-9076404)
chr2 (25-77)||(11163343-11163396)
chr2 (44-77)||(36479793-36479826)
chr2 (26-90)||(39935511-39935576)
chr2 (25-77)||(3653400-3653452)
chr2 (41-73)||(25893542-25893574)
chr2 (41-77)||(36755165-36755201)
chr2 (25-76)||(45556167-45556219)
chr2 (49-148)||(199088-199187)
chr2 (60-106)||(15848379-15848425)
chr2 (60-106)||(34448086-34448132)
chr2 (60-106)||(39498570-39498616)
chr2 (25-77)||(3556329-3556382)
chr2 (25-77)||(6589679-6589732)
chr2 (25-73)||(25892449-25892498)
chr2 (25-77)||(28230059-28230112)
chr2 (40-77)||(39423586-39423623)
chr2 (60-105)||(44713886-44713931)
chr2 (108-148)||(25230241-25230281)
chr2 (60-104)||(45556340-45556384)
[»] scaffold0599 (1 HSPs)
scaffold0599 (25-196)||(2448-2620)
[»] scaffold0388 (2 HSPs)
scaffold0388 (25-191)||(12443-12610)
scaffold0388 (24-146)||(12294-12416)
[»] scaffold0042 (1 HSPs)
scaffold0042 (24-196)||(11979-12152)
[»] scaffold0006 (2 HSPs)
scaffold0006 (25-196)||(221845-222016)
scaffold0006 (25-154)||(222030-222160)
[»] scaffold0771 (2 HSPs)
scaffold0771 (40-148)||(991-1099)
scaffold0771 (128-196)||(1119-1187)
[»] scaffold0775 (2 HSPs)
scaffold0775 (26-148)||(6227-6350)
scaffold0775 (60-148)||(5053-5141)
[»] scaffold0128 (1 HSPs)
scaffold0128 (39-147)||(19927-20035)
[»] scaffold0031 (2 HSPs)
scaffold0031 (40-106)||(69036-69102)
scaffold0031 (60-106)||(69256-69302)
[»] scaffold0007 (1 HSPs)
scaffold0007 (40-106)||(1840-1906)
[»] scaffold0005 (2 HSPs)
scaffold0005 (25-106)||(37854-37936)
scaffold0005 (60-105)||(37655-37700)
[»] scaffold0020 (1 HSPs)
scaffold0020 (25-106)||(139727-139809)


Alignment Details
Target: chr1 (Bit Score: 133; Significance: 3e-69; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 40714499 - 40714671
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||||||||||||    
T  40714499 gtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtcatcaaattagcaaaa 40714598  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  40714599 tggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 40714671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 28324859 - 28325031
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| || ||| ||||||||||||| ||||||| ||||||||||||||||    
T  28324859 gtaatcgctaatcctgacaatttacccttgcattatttaatcatttaaaatttcgtcttttgaccaacttaatcactgccacgtcatcaaattagcaaaa 28324958  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  28324959 tggcatggaaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 28325031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 45750213 - 45750041
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||    
T  45750213 gtaatcgctaatcctagcaatttactcttgcattgtttaatcatttaaaatttcatcatttgaccaacttaatcactgccacgtcatcaaattagcaaaa 45750114  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||||| | ||||||||||||| |||||||||||||||| || | |||||| ||||    
T  45750113 tggcatgggaatggacaaaaatatcatcgtcatccattcgtgaaatgacatttttatccatgtcttcatcttc 45750041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 25 - 191
Target Start/End: Original strand, 49955402 - 49955569
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||  || ||| ||||||||||||| ||||||  ||||||||||||||||    
T  49955402 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaattttgtcctttgaccaacttaatcactgccacatcatcaaattagcaaaa 49955501  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttca 191  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||    
T  49955502 tggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttca 49955569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 40 - 196
Target Start/End: Complemental strand, 31058412 - 31058256
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    |||||||||||||||||||||||||||||||||||||| |  ||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  31058412 gcaatttacccttgcattgtttaatcatttaaaatttcgtattttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggac 31058313  T
Q  140 aaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||| |||||||||||||  |||||||||||||||||||| |||||| ||||    
T  31058312 aaaaataccctcgtcatccattcgcgaaatgacatttttacccctgtcttcatcttc 31058256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 42 - 196
Target Start/End: Original strand, 8898590 - 8898744
Alignment:
Q  42 aatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaa 141  Q
    ||||||| |||| ||||||||||||||||||||||| || ||| ||||| ||||||| || |||| ||||||||||||||||||||||||||||||||||    
T  8898590 aatttactcttgtattgtttaatcatttaaaatttcgtcctttgaccaatttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaa 8898689  T
Q  142 aaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  8898690 aaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 8898744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 35038510 - 35038682
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||||||||||| |||| ||||  ||| ||||||||||||||||||||||| || ||| ||||||| ||||| ||||||| ||||||||||||||||    
T  35038510 gtaatcgttaatcctagcaaattacttttgtattgtttaatcatttaaaatttcgtcctttgaccaactcaatcactgccacgtcatcaaattagcaaaa 35038609  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||||| | || |||||||||| ||||||||||||||||||||| |||||| ||||    
T  35038610 tggcatgggaatggacaaaaatatcctcatcatccattcgtgaaatgacatttttacccctgtcttcatcttc 35038682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 49955718 - 49955588
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||  |||| | ||||||||||||||||    
T  49955718 gtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcaccgccaagtcatcaaattagcaaaa 49955619  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    ||||||||||||||||||||||||| |||||    
T  49955618 tggcatgggaatggacaaaaataccctcgtc 49955588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 35040985 - 35040855
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| | ||| | ||||||||||||||||    
T  35040985 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagcaaaa 35040886  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    ||||||||||||||||||||||||| |||||    
T  35040885 tggcatgggaatggacaaaaataccctcgtc 35040855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 17189009 - 17189139
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||| |||| |||||||| | ||| | ||||||||||||||||    
T  17189009 gtaatcgctaatcctggcaatttacccttgcattatttaatcatttaaaatttcgtcatttgaccagcttaatcactaccaagtcatcaaattagcaaaa 17189108  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    ||||||||||||||||||||||||| |||||    
T  17189109 tggcatgggaatggacaaaaataccctcgtc 17189139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 25 - 153
Target Start/End: Complemental strand, 12906030 - 12905901
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| || || | |||||||||| |||||    
T  12906030 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactgtcaagtcatcaaattaacaaaa 12905931  T
Q  124 tggcatgggaatggacaaaaataccttcgt 153  Q
    ||||||| ||||||||||||||||| ||||    
T  12905930 tggcatgagaatggacaaaaataccctcgt 12905901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 7371363 - 7371475
Alignment:
Q  42 aatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaa 141  Q
    |||||| |||||||||||||||| |||||||||||| || ||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  7371363 aatttatccttgcattgtttaattatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaa 7371462  T
Q  142 aaataccttcgtc 154  Q
    ||||||| |||||    
T  7371463 aaataccctcgtc 7371475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 45749897 - 45750027
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||| || ||| || |||||||||| | ||| | ||||||||||||||||    
T  45749897 gtaatcgttaatcctgacaatttacacttgcattgtttaatcatttaaaatttcgtcctttgacaaacttaatcactaccaagtcatcaaattagcaaaa 45749996  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    ||||||| ||||||||||||||||| |||||    
T  45749997 tggcatgagaatggacaaaaataccctcgtc 45750027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 8898871 - 8898758
Alignment:
Q  41 caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggaca 140  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| | ||| | |||||||||||||||||| || |||||||||||    
T  8898871 caatttacccttgcattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactaccaagtcatcaaattagcaaaatgacacgggaatggaca 8898772  T
Q  141 aaaataccttcgtc 154  Q
    |||||||| |||||    
T  8898771 aaaataccctcgtc 8898758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 25 - 153
Target Start/End: Complemental strand, 20760876 - 20760747
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| | |||   ||||||||||||||||    
T  20760876 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactaccaaatcatcaaattagcaaaa 20760777  T
Q  124 tggcatgggaatggacaaaaataccttcgt 153  Q
    || |||||||||||||||||||||| ||||    
T  20760776 tgacatgggaatggacaaaaataccatcgt 20760747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 40714814 - 40714685
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| || ||| ||||||||||||| | ||| | ||||||||||||||||    
T  40714814 gtaatcgctaatcctggcaatttacctttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagcaaaa 40714715  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    |||||| |||||||||||||||||| |||||    
T  40714714 tggcat-ggaatggacaaaaataccctcgtc 40714685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 42 - 146
Target Start/End: Original strand, 30326569 - 30326673
Alignment:
Q  42 aatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaa 141  Q
    ||||||||||||||||||||||||||||||||||||  ||||| || |||||||||| | ||| | |||||||||||||||||| |||||||||||||||    
T  30326569 aatttacccttgcattgtttaatcatttaaaatttcgacatttaactaacttaatcactaccaagtcatcaaattagcaaaatgacatgggaatggacaa 30326668  T
Q  142 aaata 146  Q
    |||||    
T  30326669 aaata 30326673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 37929476 - 37929595
Alignment:
Q  28 atcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatgg 126  Q
    |||| |||||||| |||||||||||| |||| ||||||||||||||||||| || ||| ||||||||||||| ||  ||| |||||||||||||||||||    
T  37929476 atcgctaatcctgacaatttacccttacattatttaatcatttaaaatttcgtcctttgaccaacttaatcactgtaacgtcatcaaattagcaaaatgg 37929575  T
Q  127 catgggaatggacaaaaata 146  Q
    |||| |||||||||||||||    
T  37929576 catgagaatggacaaaaata 37929595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 28325159 - 28325053
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    |||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| |  || | |||||||||||||||||| ||| |||||||||    
T  28325159 gcaatttacccttgcattgtttaatcatttaaaatttcgtcttttgaccaacttaatcactatcaagtcatcaaattagcaaaatgacataggaatggac 28325060  T
Q  140 aaaaata 146  Q
    |||||||    
T  28325059 aaaaata 28325053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 137
Target Start/End: Original strand, 31051005 - 31051118
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| || ||| ||||||||||||| | ||| | ||||||||||| ||||    
T  31051005 gtaatcgctaatcctggcaatttacctttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagtaaaa 31051104  T
Q  124 tggcatgggaatgg 137  Q
    ||||||||||||||    
T  31051105 tggcatgggaatgg 31051118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 146
Target Start/End: Original strand, 32132359 - 32132481
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||||||||||| |||| |||| ||| ||  ||||||||| |||||||||| ||  |  ||| ||||||| | ||||||| ||||||||||||||||    
T  32132359 gtaatcgttaatccttgcaaattactcttacaaagtttaatcaattaaaatttcgtccctacacccacttaattactgccacgtcatcaaattagcaaaa 32132458  T
Q  124 tggcatgggaatggacaaaaata 146  Q
    || ||||||||||||||||||||    
T  32132459 tgtcatgggaatggacaaaaata 32132481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 34464520 - 34464586
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| |||||||    
T  34464520 gcaatttacccttgcaatgtttaatcatttaaaatttcgtcatttgaccaacttaatcactgccacg 34464586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 7821009 - 7821091
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||||||||| || ||| |||||| |||||| |||||||    
T  7821009 gtaatcgctaatccttacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacgtaatcactgccacg 7821091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 17662222 - 17662141
Alignment:
Q  26 taatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  17662222 taatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctcttcccacttaatcactgccacg 17662141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 5734064 - 5734188
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| ||||||| |||| |||  |||||||||||||||||||||||||||  ||  |  |||   ||||| | || |||| |||||||||| |||||    
T  5734064 gtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaattttgtccctgcacccgtttaattactgtcacgtcatcaaattaacaaaa 5734163  T
Q  124 tggcatgggaatggacaaaaatacc 148  Q
    |||||||||||||||||||||||||    
T  5734164 tggcatgggaatggacaaaaatacc 5734188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 46282195 - 46282250
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  46282195 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 46282250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 49093165 - 49093220
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  49093165 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 49093220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 49093789 - 49093734
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  49093789 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 49093734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 6367617 - 6367699
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  6367617 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 6367699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 1103516 - 1103569
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  1103516 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 1103569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 36694621 - 36694568
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  36694621 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 36694568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 36710722 - 36710669
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  36710722 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 36710669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 46163085 - 46163138
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  46163085 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 46163138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 104
Target Start/End: Original strand, 1841514 - 1841594
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgcca 104  Q
    ||||||| |||||||| |||||||||||| |||||||||||||||||||||||| ||| | | || ||||||||| |||||    
T  1841514 gtaatcgctaatcctgacaatttacccttacattgtttaatcatttaaaatttcgtcactctccccacttaatcactgcca 1841594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 41098788 - 41098840
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaattt 76  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  41098788 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattt 41098840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 44523493 - 44523453
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatc 80  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44523493 gcaatttacccttgcattgtttaatcatttaaaatttcatc 44523453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 4960610 - 4960677
Alignment:
Q  39 tgcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||||||||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  4960610 tgcaatttacccttgcattgtttaatcatttaaaatttcgtccctcttcccacttaatcactgccacg 4960677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 46282769 - 46282714
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||  |||||||||||||||||||||||||||| ||||||||||||    
T  46282769 taatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaatacc 46282714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 50062327 - 50062382
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  50062327 taatcactgccacgtcatcaaattagcaaaatgacatgggaattgacaaaaatacc 50062382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 25647939 - 25648021
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||| |||||||||| |||||| ||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  25647939 gtaatcgttaatcctggcaatttacccctgcattatttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 25648021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 26024478 - 26024560
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| ||  | | || ||||||||| |||||||    
T  26024478 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaagttcgtccctctccccacttaatcactgccacg 26024560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 32917597 - 32917551
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  32917597 ttaatcatttaaaatttcatcctttgaccaacttaatcattgccacg 32917551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 37578565 - 37578483
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| |||||||||||| ||||| |||||||||||||||||| ||| | | || ||||||||| |||||||    
T  37578565 gtaatcgctaatcctggcaatttacccttacattgattaatcatttaaaatttcgtcactctccccacttaatcactgccacg 37578483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 40210727 - 40210661
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  40210727 gcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 40210661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 42248544 - 42248610
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  42248544 gcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 42248610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 13914440 - 13914387
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| ||||||||||||| |||||||||||||||||||||||    
T  13914440 gtaatcgctaatcctggcaatttacccttgtattgtttaatcatttaaaatttc 13914387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 14879042 - 14879079
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14879042 gcaatttacccttgcattgtttaatcatttaaaatttc 14879079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 17189222 - 17189173
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaa 73  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  17189222 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaa 17189173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 24009898 - 24009861
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24009898 gcaatttacccttgcattgtttaatcatttaaaatttc 24009861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 40772562 - 40772615
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||| ||||||||||||||||||||||||||||    
T  40772562 gtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatttc 40772615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 13295258 - 13295314
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||| ||||||| |||||||||||||||||| ||||| ||| ||||||||||||    
T  13295258 ttaatcactgccacgtcatcaaattagcaaaatgacatggaaatagacaaaaatacc 13295314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 30711383 - 30711435
Alignment:
Q  26 taatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||| ||||||| |||||||| |||||||||||||||||||||||||||||    
T  30711383 taatcgctaatcctagcaatttatccttgcattgtttaatcatttaaaatttc 30711435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 50062924 - 50062869
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| || |||| ||||||||||||||||||||||| |||| ||||||||||||    
T  50062924 taatcactgtcacgtcatcaaattagcaaaatggcatgagaattgacaaaaatacc 50062869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 183564 - 183482
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| ||||||| ||||||||||| |||||| ||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  183564 gtaatcgctaatcctagcaatttacccctgcattatttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 183482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 30326746 - 30326700
Alignment:
Q  145 taccttcgtcatccattcatgaaatgacatttttacccctatcttca 191  Q
    |||| ||||||||||||||||||||||||||||||||| | ||||||    
T  30326746 taccctcgtcatccattcatgaaatgacatttttacccatgtcttca 30326700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 30711664 - 30711618
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||||    
T  30711664 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgccacg 30711618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 40210461 - 40210511
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacat 110  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||||||    
T  40210461 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgacat 40210511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 49723063 - 49723017
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||||    
T  49723063 ttaatcatttaaaatttcatcctttgaccaacttaatcactgccacg 49723017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 19515874 - 19515927
Alignment:
Q  25 gtaatcgttaatcctgcaa-tttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||| ||| || ||||||||||||||||||||| ||||||||||||    
T  19515874 gtaatcgttaattctggaaatttacccttgcattgtttaattatttaaaatttc 19515927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 23209700 - 23209647
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||||||||||||| ||||||||| ||||||    
T  23209700 gtaatcgctaatcctggcaatttacccttgcattgttcaatcatttacaatttc 23209647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 32917315 - 32917368
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| || ||||| ||||||||||||||||||||||||||||    
T  32917315 gtaatcgctaatcctgacagtttactcttgcattgtttaatcatttaaaatttc 32917368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 43758877 - 43758930
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||| ||| |||||||| ||||||||||||||||||||||||||||    
T  43758877 gtaatcgctaattctgacaatttactcttgcattgtttaatcatttaaaatttc 43758930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 19017986 - 19017950
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaattt 76  Q
    |||||||||||||||||| ||||||||||||||||||    
T  19017986 gcaatttacccttgcattatttaatcatttaaaattt 19017950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 34464806 - 34464770
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaattt 76  Q
    |||||||||||||||| ||||||||||||||||||||    
T  34464806 gcaatttacccttgcaatgtttaatcatttaaaattt 34464770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 35152415 - 35152450
Alignment:
Q  41 caatttacccttgcattgtttaatcatttaaaattt 76  Q
    |||||||||||| |||||||||||||||||||||||    
T  35152415 caatttacccttacattgtttaatcatttaaaattt 35152450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 1841796 - 1841750
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  1841796 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 1841750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 6367899 - 6367853
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  6367899 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 6367853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 14879308 - 14879262
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  14879308 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 14879262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 24009666 - 24009704
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatca 98  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  24009666 ttaatcatttaaaatttcatcctttgaccaacttaatca 24009704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 41099070 - 41099032
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatca 98  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  41099070 ttaatcatttaaaatttcgtcatttgaccaacttaatca 41099032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 145
Target Start/End: Complemental strand, 46899894 - 46899852
Alignment:
Q  103 cacgacatcaaattagcaaaatggcatgggaatggacaaaaat 145  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||    
T  46899894 cacgtcatcaaattagtaaaatggcatgggaatgaacaaaaat 46899852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 48779456 - 48779410
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  48779456 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 48779410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 17691274 - 17691327
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| ||||||| |||| |||  ||||||||||||||||||||||||||||    
T  17691274 gtaatcgctaatccttgcaaattagtcttgcattgtttaatcatttaaaatttc 17691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 145
Target Start/End: Original strand, 46899200 - 46899237
Alignment:
Q  108 catcaaattagcaaaatggcatgggaatggacaaaaat 145  Q
    |||||||| | |||||||||||||||||||||||||||    
T  46899200 catcaaataaacaaaatggcatgggaatggacaaaaat 46899237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 32558477 - 32558425
Alignment:
Q  26 taatcgttaatcctgc-aatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||| ||||||||  |||||||||||| | |||||||||||||||||||||    
T  32558477 taatcgctaatcctgataatttacccttgtaatgtttaatcatttaaaatttc 32558425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 129; Significance: 6e-67; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 11511 - 11339
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| ||||||| ||||||||||||||||    
T  11511 gtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcttttgaccaacttaatcactgccacgtcatcaaattagcaaaa 11412  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  11411 tggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 11339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 11211 - 11325
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    |||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  11211 gcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccaagtcatcaaattagcaaaatggcatgggaatggac 11310  T
Q  140 aaaaataccttcgtc 154  Q
    ||||||||| |||||    
T  11311 aaaaataccctcgtc 11325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 6e-67; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 25628533 - 25628705
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| ||||||| ||||||||||||||||    
T  25628533 gtaatcgataatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaa 25628632  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  25628633 tggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttacccctatcttcatcttc 25628705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 32068467 - 32068295
Alignment:
Q  25 gtaatcgttaatcctgc-aatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||||||||||||    
T  32068467 gtaatcgctaatcctgccaatttacccttgcattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtcatcaaattagcaaaa 32068368  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    |||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  32068367 tggcatgggaattgacaaaaagaccctcgtcatccattcatgaaatgacatttttacccctgtcttcatcttc 32068295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 32934719 - 32934547
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| |||||||| ||| |||||||||||||||||||||||| |||||| ||||||||||||| || |||||||||||||||||||||    
T  32934719 gtaatcgctaatcctgacaatttactcttacattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactgtcacgacatcaaattagcaaaa 32934620  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    || |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  32934619 tgacatgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttacccctatcttcatcttc 32934547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 42618282 - 42618110
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| || |||| ||||||||||||||||    
T  42618282 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcacgtcatcaaattagcaaaa 42618183  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  42618182 tggcatgggaatggacaaaaatatcctcgtcatccattcatgaaatgacatttttacccctgtcttcatcttc 42618110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 43266321 - 43266493
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||| |||||||||| |||||    
T  43266321 gtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaatttcatcatttgaccaacttaatcactgtcacgtcatcaaattaacaaaa 43266420  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  43266421 tggtatgggaatgaacaaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 43266493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 46205680 - 46205508
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| || ||| ||||||||||||| |  |||| ||||||||||| ||||    
T  46205680 gtaatcgttaatcctgacaaattacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactatcacgtcatcaaattaggaaaa 46205581  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  46205580 tggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 46205508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 23058800 - 23058628
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||| | ||||||| |||||||||| |||||    
T  23058800 gtaatcgttaatcctggcaatttaccctcgcattgtttaatcatttaaaatttcgtcatttgaccaacttaattactgccacgtcatcaaattaacaaaa 23058701  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||||||| | |||||||||||   ||||||||||||||||||| |||||| ||||    
T  23058700 tggcatgggaatggacaaaaatacccttgtcatccattcgcaaaatgacatttttacccctgtcttcatcttc 23058628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 10600320 - 10600148
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| |||||||||||||||||||||||||||| |||||||  || ||| ||||||||||||| || || | ||||||||||||||||    
T  10600320 gtaatcgctaatcctgacaatttacccttgcattgtttaatcattcaaaattttgtcctttgaccaacttaatcactgtcatgtcatcaaattagcaaaa 10600221  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| |||||| ||||    
T  10600220 tggcatgggaatggacaaaaataccctcgtcatccatttgtgaaatgacatttttacccctgtcttcatcttc 10600148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 22081630 - 22081786
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    |||||||||||||||||||||||||||||||||||||| || ||| | ||||||||||| ||||| | |||||||||||| |||||||||| ||||||||    
T  22081630 gcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgatcaacttaatcactgccaagtcatcaaattagcgaaatggcatgagaatggac 22081729  T
Q  140 aaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  22081730 aaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 22081786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 27 - 196
Target Start/End: Complemental strand, 25453497 - 25453327
Alignment:
Q  27 aatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatg 125  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||| ||||| || ||| |||| ||||||||  |||||| ||||||||||||||||||    
T  25453497 aatcgctaatcctagcaatttacccttgcattgtttaatcatttaacatttcgtcctttgaccagcttaatcaccgccacgtcatcaaattagcaaaatg 25453398  T
Q  126 gcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||| | ||||||||||||  ||||||||||||||||||||| |||||| ||||    
T  25453397 gcatgggaatggacaaaaatatcctcgtcatccatttgtgaaatgacatttttacccctgtcttcatcttc 25453327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 22081930 - 22081811
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| | |||||||||||| |||    
T  22081930 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcatttgaccaacttaatcattgccaagtcatcaaattagccaaa 22081831  T
Q  124 tggcatgggaatggacaaaa 143  Q
    ||| ||||||||||||||||    
T  22081830 tggtatgggaatggacaaaa 22081811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 25628849 - 25628719
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| || || | ||||||||||||||||    
T  25628849 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcaagtcatcaaattagcaaaa 25628750  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    |||||||||||||||||||| |||| |||||    
T  25628749 tggcatgggaatggacaaaactaccctcgtc 25628719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 32068151 - 32068281
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |  ||| ||||||||||||| ||||| | ||||||||||||||||    
T  32068151 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtactttgaccaacttaatcaatgccaagtcatcaaattagcaaaa 32068250  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    ||||||||||| ||||||||||||| |||||    
T  32068251 tggcatgggaaaggacaaaaataccctcgtc 32068281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 28890634 - 28890767
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| || ||| || |||||||||| || |||| ||||||||||||||||    
T  28890634 gtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtcttttgactaacttaatcactgtcacgtcatcaaattagcaaaa 28890733  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatc 157  Q
    |||||||  |||||||||||||||| ||||||||    
T  28890734 tggcatgaaaatggacaaaaataccctcgtcatc 28890767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 26 - 154
Target Start/End: Original strand, 42617967 - 42618096
Alignment:
Q  26 taatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaat 124  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| | ||||||||||| | ||| | |||||||||||||||||    
T  42617967 taatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgatcaacttaatcactaccaagtcatcaaattagcaaaat 42618066  T
Q  125 ggcatgggaatggacaaaaataccttcgtc 154  Q
    |||||||||||||||||||||||| |||||    
T  42618067 ggcatgggaatggacaaaaataccctcgtc 42618096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 32934403 - 32934527
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| | ||| | ||||||||||||||||    
T  32934403 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagcaaaa 32934502  T
Q  124 tggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||||||||||||||    
T  32934503 tggcataggaatggacaaaaatacc 32934527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 33828345 - 33828221
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| || ||   ||||||| || |||||    
T  33828345 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactgtcaaatcatcaaactaacaaaa 33828246  T
Q  124 tggcatgggaatggacaaaaatacc 148  Q
    |||||||||||||||||||||||||    
T  33828245 tggcatgggaatggacaaaaatacc 33828221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 25453184 - 25453307
Alignment:
Q  26 taatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaat 124  Q
    |||||| |||||||| ||||||||||||||||| ||||||||||||||||||| || ||| ||||||||||||| | ||| | ||||||||||||||||     
T  25453184 taatcgctaatcctgacaatttacccttgcattatttaatcatttaaaatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagcaaaaa 25453283  T
Q  125 ggcatgggaatggacaaaaatacc 148  Q
    ||||||||||||||||||||||||    
T  25453284 ggcatgggaatggacaaaaatacc 25453307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 27138312 - 27138182
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |  ||| |||||||||||||  |||| | |||||||||| |||||    
T  27138312 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttctttctttgaccaacttaatcaccgccaagtcatcaaattaacaaaa 27138213  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    |  |||||||||||||||||||||| |||||    
T  27138212 taacatgggaatggacaaaaataccctcgtc 27138182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 43266637 - 43266514
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||| ||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| | | | | ||||||||||||||||    
T  43266637 gtaatcgctaattctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactactaagtcatcaaattagcaaaa 43266538  T
Q  124 tggcatgggaatggacaaaaatac 147  Q
    || |||| ||||||||||||||||    
T  43266537 tgacatgagaatggacaaaaatac 43266514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 39274925 - 39275045
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcatttt-accaacttaatcattgccacgacatcaaattagcaaa 122  Q
    ||||||| ||||||| | |||||||| ||||||||||||||||||||||||||| || |||| ||||||||||||| ||||||| |||||||||||| ||    
T  39274925 gtaatcgctaatcctagtaatttacctttgcattgtttaatcatttaaaatttcgtccttttgaccaacttaatcactgccacgtcatcaaattagc-aa 39275023  T
Q  123 atggcatgggaatggacaaaaa 144  Q
    |||||||| |||||||||||||    
T  39275024 atggcatgagaatggacaaaaa 39275045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 148
Target Start/End: Complemental strand, 43124503 - 43124401
Alignment:
Q  46 tacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaat 145  Q
    |||||||||||||||||||||||||||||||| ||  | | || | ||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  43124503 tacccttgcattgtttaatcatttaaaatttcgtccctattcccagttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaat 43124404  T
Q  146 acc 148  Q
    |||    
T  43124403 acc 43124401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 147
Target Start/End: Original strand, 23058500 - 23058607
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    ||||| |||| ||||||||||||||||||||||||||| || ||| ||||||||||||    ||| | |||||||||||||||||| |||||||||||||    
T  23058500 gcaatataccattgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcgccaccaagtcatcaaattagcaaaatgtcatgggaatggac 23058599  T
Q  140 aaaaatac 147  Q
    ||||||||    
T  23058600 aaaaatac 23058607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 18856027 - 18855903
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||||||||| || ||| |||||||||||  |||||||||||||||||||| ||  || ||| ||||||| | || |||| ||||||||||||||||    
T  18856027 gtaatcgttaatcttggcaaattacccttgcaaagtttaatcatttaaaatttcgtcccttaacccacttaatgactgacacgtcatcaaattagcaaaa 18855928  T
Q  124 tggcatgggaatggacaaaaatacc 148  Q
    | ||||||||| |||||||||||||    
T  18855927 tagcatgggaaaggacaaaaatacc 18855903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 46204476 - 46204599
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| ||| |||| ||||||||| ||||||| ||| ||||||||||||||| ||  || ||||||||||||| ||| | | ||||||||||| ||||    
T  46204476 gtaatcgctaaacctgacaatttaccattgcattattttatcatttaaaatttcgtccattgaccaacttaatcactgctaagtcatcaaattagtaaaa 46204575  T
Q  124 tggcatgggaatggacaaaaatac 147  Q
    ||||||||||||| ||||||||||    
T  46204576 tggcatgggaatgaacaaaaatac 46204599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 60 - 158
Target Start/End: Original strand, 4226216 - 4226314
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaataccttcgtcatcc 158  Q
    |||||||||||||||||| || || | ||   ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  4226216 ttaatcatttaaaatttcgtccttcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcatcatcc 4226314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 18087675 - 18087587
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||||||||||||||  ||  || ||| ||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18087675 ttaatcatttaaaattttgtcccttaacccacttaatgactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaatacc 18087587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 5455916 - 5456006
Alignment:
Q  58 gtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||||||||||||||||||||  |  ||| ||||||| | ||||||  ||||||||||||||||||||||| |||||||||||||||||    
T  5455916 gtttaatcatttaaaatttcatccctacacccacttaattactgccacatcatcaaattagcaaaatggcatgagaatggacaaaaatacc 5456006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 12228474 - 12228564
Alignment:
Q  58 gtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||||||||||||||||| || ||| ||| ||||||| | || |||| |||||||||| |||||||||||| |||||||||||||||||    
T  12228474 gtttaatcatttaaaatttcgtcgtttaacccacttaatgactgtcacgtcatcaaattaacaaaatggcatgagaatggacaaaaatacc 12228564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 33808404 - 33808502
Alignment:
Q  50 cttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||||| ||||||||||||||||||| ||  || ||| | ||||||  |||| || ||||||||||||||||||| |||||||||||||||||||||    
T  33808404 cttgcattctttaatcatttaaaatttcgtccattgacccagttaatcgctgccccgtcatcaaattagcaaaatgggatgggaatggacaaaaatacc 33808502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 45914647 - 45914714
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaataccttcgtcatcca 159  Q
    ||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||| || |||||||    
T  45914647 ttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcatcatcca 45914714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 28469381 - 28469328
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28469381 gtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 28469328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 6571068 - 6571120
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaattt 76  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6571068 gtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaattt 6571120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 29144340 - 29144232
Alignment:
Q  39 tgcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatgga 138  Q
    ||||| ||||| ||||||||||||||||||||||||||||||  | |  | | ||||||| || ||   ||||||||||||||||| | |||||||||||    
T  29144340 tgcaacttacctttgcattgtttaatcatttaaaatttcatctctatttccagttaatcactgtcatctcatcaaattagcaaaattgtatgggaatgga 29144241  T
Q  139 caaaaatac 147  Q
    |||||||||    
T  29144240 caaaaatac 29144232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 32688555 - 32688467
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||||||||||||||| ||  || ||| ||||||| | ||||||| ||||||||||||||||| |||||| ||| ||||||||||||    
T  32688555 ttaatcatttaaaatttcgtcccttgacccacttaataactgccacgtcatcaaattagcaaaattgcatggaaatagacaaaaatacc 32688467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 48789176 - 48789120
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatc 80  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  48789176 gtaatcgttaattctggcaatttacccttgcattgtttaatcatttaaaatttcatc 48789120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 22661481 - 22661536
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  22661481 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 22661536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 27480111 - 27480166
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  27480111 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 27480166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 19204544 - 19204626
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||  ||  | | || |||||||||||||||||    
T  19204544 gtaatcgttaattctggcaatttacccttgcattgtttaatcatttaaaattttgtccctctccccacttaatcattgccacg 19204626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 10935849 - 10935902
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  10935849 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 10935902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 148
Target Start/End: Original strand, 18086359 - 18086468
Alignment:
Q  39 tgcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatgga 138  Q
    ||||| ||| ||||||| |  ||||||| |||||||||| ||  || ||| | ||||| | ||||| | |||||||||||||||||||||||| ||||||    
T  18086359 tgcaaattagccttgcaattattaatcacttaaaatttcgtcccttgacccagttaattactgccatgtcatcaaattagcaaaatggcatggaaatgga 18086458  T
Q  139 caaaaatacc 148  Q
    ||||||||||    
T  18086459 caaaaatacc 18086468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 4227149 - 4227090
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaataccttc 151  Q
    ||||||| ||||||  ||| ||||||||||||||||||| ||||||||||||||||||||    
T  4227149 ttaatcactgccacatcataaaattagcaaaatggcatgagaatggacaaaaataccttc 4227090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 27480723 - 27480668
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| | ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  27480723 taatcactaccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 27480668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 45010962 - 45010895
Alignment:
Q  39 tgcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||||||||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  45010962 tgcaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactgccacg 45010895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 158
Target Start/End: Complemental strand, 12644110 - 12644044
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaataccttcgtcatcc 158  Q
    ||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||| || || ||||||    
T  12644110 ttaatcactgccacgtcatcaaattagcaaaatggcatgagaatgaacaaaaatgccctcatcatcc 12644044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 17102075 - 17102157
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| |||||||||| |||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  17102075 gtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 17102157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 77
Target Start/End: Complemental strand, 22871635 - 22871597
Alignment:
Q  39 tgcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22871635 tgcaatttacccttgcattgtttaatcatttaaaatttc 22871597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 27991794 - 27991876
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| |||||||||| |||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  27991794 gtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 27991876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 32299078 - 32298996
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| |||||||||||||||||||||||||||| |||||||| ||  | | || ||||||||| |||||||    
T  32299078 gtaatcgctaatcctggcaatttacccttgcattgtttaatcattgaaaatttcgtccctctccccacttaatcactgccacg 32298996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 158
Target Start/End: Original strand, 47558153 - 47558219
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaataccttcgtcatcc 158  Q
    ||||||| || |||| |||||||||||||||||| |||||||||||| ||||||||| || ||||||    
T  47558153 ttaatcactgtcacgtcatcaaattagcaaaatgtcatgggaatggataaaaataccctcatcatcc 47558219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 2640535 - 2640498
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2640535 gcaatttacccttgcattgtttaatcatttaaaatttc 2640498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 6253526 - 6253579
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||    
T  6253526 gtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 6253579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 23181351 - 23181314
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23181351 gcaatttacccttgcattgtttaatcatttaaaatttc 23181314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 27396720 - 27396765
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  27396720 ttaatcatttaaaatttcatcatttgaccaacttaatcactgccac 27396765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 42731474 - 42731527
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||    
T  42731474 gtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 42731527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 3914475 - 3914431
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgcca 104  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||    
T  3914475 ttaatcatttaaaatttcatcatttgaccaacttaatcactgcca 3914431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 12643223 - 12643279
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||| ||||||| ||||||||||||  |||||||| ||||||||||||||||||    
T  12643223 ttaatcactgccacgtcatcaaattagcttaatggcataggaatggacaaaaatacc 12643279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 32053515 - 32053463
Alignment:
Q  26 taatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||||| |||||||| | |||||||||||||||||||||||||||    
T  32053515 taatcgttaatcctagcaatttatcattgcattgtttaatcatttaaaatttc 32053463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 42362509 - 42362585
Alignment:
Q  29 tcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgcca 104  Q
    ||||||||||| |||| ||||||||||||| ||||||||||||||||||| || ||| ||| | |||||| ||||||    
T  42362509 tcgttaatccttgcaaattacccttgcattctttaatcatttaaaatttcgtcctttaacccagttaatcgttgcca 42362585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 75
Target Start/End: Complemental strand, 16804002 - 16803967
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatt 75  Q
    ||||||||||||||||||||||||||||||||||||    
T  16804002 gcaatttacccttgcattgtttaatcatttaaaatt 16803967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 32687452 - 32687575
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||| || ||||||||    |||||||||||||||||| |   || ||| | | ||| | ||||||  ||||||||||||||||    
T  32687452 gtaatcgttaatcctggcaaattgcccttgcaaatattaatcatttaaaatttcgttccttgacccaatcaatgactgccacttcatcaaattagcaaaa 32687551  T
Q  124 tggcatgggaatggacaaaaatac 147  Q
    | |||||||||||||| |||||||    
T  32687552 ttgcatgggaatggaccaaaatac 32687575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 13384641 - 13384691
Alignment:
Q  108 catcaaattagcaaaatggcatgggaatggacaaaaataccttcgtcatcc 158  Q
    |||||||||| ||||||| |||||||||||||||||||||| || ||||||    
T  13384641 catcaaattaacaaaatgacatgggaatggacaaaaataccctcatcatcc 13384691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 47945487 - 47945537
Alignment:
Q  108 catcaaattagcaaaatggcatgggaatggacaaaaataccttcgtcatcc 158  Q
    |||||||||| ||||||||||| |||||||||||||||||| || ||||||    
T  47945487 catcaaattaacaaaatggcataggaatggacaaaaataccctcatcatcc 47945537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 47950917 - 47950967
Alignment:
Q  108 catcaaattagcaaaatggcatgggaatggacaaaaataccttcgtcatcc 158  Q
    |||||||||| ||||||||||| |||||||||||||||||| || ||||||    
T  47950917 catcaaattaacaaaatggcataggaatggacaaaaataccctcatcatcc 47950967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 48788894 - 48788932
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatca 98  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  48788894 ttaatcatttaaaatttcatcatttgaccaacttaatca 48788932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 3914209 - 3914274
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    |||||||||  ||||||||||||||||||||||||||| ||  | | |||||||||||| ||||||    
T  3914209 gcaatttacatttgcattgtttaatcatttaaaatttcgtccctcttccaacttaatcactgccac 3914274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 13044726 - 13044807
Alignment:
Q  24 agtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgcca 104  Q
    |||||||| || ||||| ||||||||| ||||||||||||||||||||||| ||| ||  || || |||||||||| |||||    
T  13044726 agtaatcgctactcctgacaatttaccattgcattgtttaatcatttaaaaattcgtcccttaacaaacttaatcactgcca 13044807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 32053234 - 32053279
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  32053234 ttaatcatttaaaatttcatcttttgaccaacttaatcactgccac 32053279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 45010669 - 45010706
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  45010669 gcaatttacgcttgcattgtttaatcatttaaaatttc 45010706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 103
Target Start/End: Original strand, 28469101 - 28469144
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgcc 103  Q
    |||||||||||||||||| || ||| ||||||||||||||||||    
T  28469101 ttaatcatttaaaatttcgtcctttgaccaacttaatcattgcc 28469144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 32298863 - 32298906
Alignment:
Q  62 aatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||    
T  32298863 aatcatttaaaatttcgtcatttgaccaacttaatcactgccac 32298906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 106
Target Start/End: Original strand, 40379839 - 40379906
Alignment:
Q  39 tgcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||||| ||| ||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  40379839 tgcaatttacctttgtattgtttaatcatttaaaatttcgtccctctccccacttaatcaatgccacg 40379906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 2640269 - 2640315
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  2640269 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 2640315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 13050154 - 13050104
Alignment:
Q  25 gtaatcgttaatcctgc-aatttacccttgca-ttgtttaatcatttaaaa 73  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  13050154 gtaatcgttaatcctggtaatttacccttgcaattgtttaatcatttaaaa 13050104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 19204795 - 19204749
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||| ||||||||||||||||||| ||||| ||||||| |||||||    
T  19204795 ttaattatttaaaatttcatcatttgaccaatttaatcactgccacg 19204749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 27396968 - 27396886
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| ||||| |||  |||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  27396968 gtaatcgctaatcctgacaattcaccactgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 27396886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 42731756 - 42731710
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  42731756 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 42731710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 5457276 - 5457227
Alignment:
Q  29 tcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||| |||| |||||||| || |||||||||||||||||||||    
T  5457276 tcgttaatccttgcaaattaccctttcaatgtttaatcatttaaaatttc 5457227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 6571285 - 6571240
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    |||||||||||||||||| || ||| ||||||||||||| ||||||    
T  6571285 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 6571240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 24388890 - 24388927
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  24388890 gcaatttacccttgtattgtttaatcacttaaaatttc 24388927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 37656907 - 37656960
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| ||||||| ||||||||| ||||||||||||| | ||||||||||||    
T  37656907 gtaatcgctaatcctcgcaatttacgcttgcattgtttatttatttaaaatttc 37656960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 42019954 - 42019917
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  42019954 gcaatttactcttgcattgtttaattatttaaaatttc 42019917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 47559029 - 47558988
Alignment:
Q  107 acatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||| |||||||||||||| ||||| ||||||||||||||||    
T  47559029 acattaaattagcaaaatgacatggaaatggacaaaaatacc 47558988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 4e-62; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 15230302 - 15230130
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| ||||| || ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| ||||||| ||||||||||||||||    
T  15230302 gtaatcgctaatcttgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaa 15230203  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  15230202 tggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 15230130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 44664563 - 44664735
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||||||||||||    
T  44664563 gtaatcgttaatcctggcaatttaaccttgcattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactgccacgtcatcaaattagcaaaa 44664662  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||| ||||||||||||||||| | ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  44664663 tggcacgggaatggacaaaaatatcctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 44664735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 40 - 196
Target Start/End: Complemental strand, 25124918 - 25124762
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||| ||||||| |||||||||||||||||| |||||||||||||    
T  25124918 gcaatttacccttgcattgtttaatcatttaaaatttcatcctttgaacaacttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggac 25124819  T
Q  140 aaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  25124818 aaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 25124762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 25 - 187
Target Start/End: Complemental strand, 42945485 - 42945322
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| |||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||| | ||||||||||| ||||    
T  42945485 gtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactgccaagtcatcaaattagtaaaa 42945386  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatc 187  Q
    ||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||    
T  42945385 tggcatgggaatggacaaaaataccctcgtcatccattcttgtaatgacatttttacccctatc 42945322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 26 - 196
Target Start/End: Original strand, 6471746 - 6471917
Alignment:
Q  26 taatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaat 124  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| ||||||| |||||||||||||||||    
T  6471746 taatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtctttttatcaacttaatcactgccacgtcatcaaattagcaaaat 6471845  T
Q  125 ggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    | |||||||||||| ||||||| | ||||||||||||| | ||||||||||||||||||| |||||| ||||    
T  6471846 gacatgggaatggataaaaatatcctcgtcatccattcgtaaaatgacatttttacccctgtcttcatcttc 6471917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 21433064 - 21432892
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||||||||  || |||||||||||||||||||||||||||||| ||| || || ||| ||||||||||||| || ||||  |||||||||||||||    
T  21433064 gtaatcgttaattttgacaatttacccttgcattgtttaatcatttacaatgtcgtcctttgaccaacttaatcactgacacgttatcaaattagcaaaa 21432965  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    || |||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  21432964 tgacatgggaatggataaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 21432892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 41353936 - 41353773
Alignment:
Q  33 taatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgg 131  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||||| || ||| |||||||||||||  | |||| |||||||||||||||||| ||||     
T  41353936 taatcctgacaatttaccctagcattatttaatcatttaaaatttcgtcctttgaccaacttaatcaccgtcacgtcatcaaattagcaaaatgacatga 41353837  T
Q  132 gaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  41353836 gaatggacaaaaatacc-tcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 41353773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 153
Target Start/End: Complemental strand, 10445706 - 10445577
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| ||||||| ||||||||||||||||    
T  10445706 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcttttgaccaacttaatcactgccacgtcatcaaattagcaaaa 10445607  T
Q  124 tggcatgggaatggacaaaaataccttcgt 153  Q
    |||||||| |||||||||||||||| ||||    
T  10445606 tggcatggaaatggacaaaaataccctcgt 10445577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 35634470 - 35634346
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| || |||| ||||||||||||||||    
T  35634470 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttaaccaacttaatcactgtcacgtcatcaaattagcaaaa 35634371  T
Q  124 tggcatgggaatggacaaaaatacc 148  Q
    |||||||||||||||||||||||||    
T  35634370 tggcatgggaatggacaaaaatacc 35634346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 44664879 - 44664757
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||| | ||||| ||||||||||    
T  44664879 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgttatttgaccaacttaatcattgccaagtcatcagattagcaaaa 44664780  T
Q  124 tggcatgggaatggacaaaaata 146  Q
    |||||||||||||||||||||||    
T  44664779 tggcatgggaatggacaaaaata 44664757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 60 - 196
Target Start/End: Complemental strand, 27500423 - 27500287
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaataccttcgtcatcca 159  Q
    ||||||||||||||||||||||||| ||||||||||||| || |||| ||||||||||| ||||| |||||||||||| |||||||||| ||||||||||    
T  27500423 ttaatcatttaaaatttcatcatttgaccaacttaatcactgtcacgtcatcaaattagaaaaattgcatgggaatgggcaaaaataccctcgtcatcca 27500324  T
Q  160 ttcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||| |||| ||| |||||||||||| |||||| ||||    
T  27500323 ttcgtgaattgatatttttacccctgtcttcatcttc 27500287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 42 - 178
Target Start/End: Complemental strand, 37542578 - 37542442
Alignment:
Q  42 aatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaa 141  Q
    |||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| | | ||| |||  ||||||||||||| |||  ||||||||||    
T  37542578 aatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactccaacgtcattgaattagcaaaatgacattagaatggacaa 37542479  T
Q  142 aaataccttcgtcatccattcatgaaatgacattttt 178  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  37542478 aaataccctcgtcatccattcgtgaaatgacattttt 37542442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 156
Target Start/End: Original strand, 39474617 - 39474732
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    |||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| ||||||  |||||||||||||||||||||||| |||||||    
T  39474617 gcaatttacccttgcattgtttaatcatttaaaatttcgtc-tttgaccaacttaatcactgccacatcatcaaattagcaaaatggcatggaaatggac 39474715  T
Q  140 aaaaataccttcgtcat 156  Q
    ||||||||| |||||||    
T  39474716 aaaaataccctcgtcat 39474732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 154
Target Start/End: Original strand, 42945177 - 42945299
Alignment:
Q  33 taatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgg 131  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||| || ||| ||||||||||||| ||||| | ||||||||||| ||||||||||||    
T  42945177 taatcctgacaatttacccttatattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccaagtcatcaaattagtaaaatggcatgg 42945276  T
Q  132 gaatggacaaaaataccttcgtc 154  Q
    ||||||||||||||||| |||||    
T  42945277 gaatggacaaaaataccctcgtc 42945299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 8998060 - 8997943
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| ||||| || ||||||||||||||||||||||||||||||||||| | || ||| ||||||||||||| || |||| ||||||||||||||||    
T  8998060 gtaatcgctaatcatgacaatttacccttgcattgtttaatcatttaaaattccgtcctttgaccaacttaatcactgtcacgtcatcaaattagcaaaa 8997961  T
Q  124 tggcatgggaatggacaa 141  Q
    ||||||||||||||||||    
T  8997960 tggcatgggaatggacaa 8997943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 21432765 - 21432878
Alignment:
Q  41 caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggaca 140  Q
    ||||||||||||||||||||||||||||||||||||| || ||| || |||||||||| | ||| | |||||||||||||||||||||||| ||||||||    
T  21432765 caatttacccttgcattgtttaatcatttaaaatttcgtcttttgactaacttaatcactcccaagtcatcaaattagcaaaatggcatggaaatggaca 21432864  T
Q  141 aaaataccttcgtc 154  Q
    |||||||| |||||    
T  21432865 aaaataccatcgtc 21432878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 26 - 154
Target Start/End: Original strand, 37542280 - 37542409
Alignment:
Q  26 taatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaat 124  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||| |  ||| |||||||||||||  |||| | |||||||||| ||||||    
T  37542280 taatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgttctttgaccaacttaatcaccgccaagtcatcaaattaacaaaat 37542379  T
Q  125 ggcatgggaatggacaaaaataccttcgtc 154  Q
    |||||||||||| ||||||||||| |||||    
T  37542380 ggcatgggaatgaacaaaaataccctcgtc 37542409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 15229986 - 15230110
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||| ||||||||||||||||||||||| || ||| | ||||||||||| | ||| |  |||||||||||||||    
T  15229986 gtaatcgctaatcctggcaatttacccttggattgtttaatcatttaaaatttcgtcctttgatcaacttaatcactaccaagttatcaaattagcaaaa 15230085  T
Q  124 tggcatgggaatggacaaaaatacc 148  Q
    |||||||||||||||||||||||||    
T  15230086 tggcatgggaatggacaaaaatacc 15230110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 25124618 - 25124741
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| |||||||||| || ||||| | ||||||||||||||||    
T  25124618 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaaccactgccaagtcatcaaattagcaaaa 25124717  T
Q  124 tggcatgggaatggacaaaaatac 147  Q
    ||  |||||||| |||||||||||    
T  25124718 tgatatgggaattgacaaaaatac 25124741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 6472061 - 6471931
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||  ||||||| ||||||||||||||||||||||||||||||||||||  || ||| ||||||||||||| | ||| |  ||||||||| |||||    
T  6472061 gtaatcgccaatcctgacaatttacccttgcattgtttaatcatttaaaattttgtcctttgaccaacttaatcactaccaagttatcaaattaacaaaa 6471962  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    | |||||||||| |||||||||||| |||||    
T  6471961 tagcatgggaattgacaaaaataccctcgtc 6471931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 41353629 - 41353759
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||| | ||| |  ||||||||| |||||    
T  41353629 gtaatcgctaatcctaacaatttacccttgcattgtttaatcatttaaaatttcgtcatttgagcaacttaatcactaccaagttatcaaattaacaaaa 41353728  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    || |||| ||||||||||| ||||| |||||    
T  41353729 tgacatgagaatggacaaatataccctcgtc 41353759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 2535923 - 2535800
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||| |||||||| ||  |||||||||||||||||||| ||  || ||| ||||||| | ||||||  ||||||||||| ||||    
T  2535923 gtaatcgttaatcctggcaaattacccttacaaagtttaatcatttaaaatttcgtcccttgacccacttaatgactgccacatcatcaaattagtaaaa 2535824  T
Q  124 tggcatgggaatggacaaaaatac 147  Q
    ||||||||||||||||||||||||    
T  2535823 tggcatgggaatggacaaaaatac 2535800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 34177318 - 34177219
Alignment:
Q  49 ccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||||| ||||||||||||||||||| ||  || ||| ||||||| | ||||||  |||||||||||||||||||||||||||||||||||||||||    
T  34177318 ccttgcattctttaatcatttaaaatttcgtcccttgacccacttaatgactgccacatcatcaaattagcaaaatggcatgggaatggacaaaaatacc 34177219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 121 - 202
Target Start/End: Complemental strand, 7983702 - 7983621
Alignment:
Q  121 aaatggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttcatttca 202  Q
    |||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| |||| |||||    
T  7983702 aaatggcatgggaatgaacaaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttcttttca 7983621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 7983483 - 7983606
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| |  |||||||||| | | | | ||||||||||| ||||    
T  7983483 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaaaaacttaatcactacaaagtcatcaaattagaaaaa 7983582  T
Q  124 tggcatgggaatggacaaaaatac 147  Q
    || ||||  |||||||||||||||    
T  7983583 tgacatgaaaatggacaaaaatac 7983606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 34176522 - 34176620
Alignment:
Q  50 cttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||||| |||||||||||||||||||||| ||| ||| | ||||||| || || | |||||||||||||||||||| |||||| |||||||||||||    
T  34176522 cttgcattctttaatcatttaaaatttcatcctttgacccagttaatcactgtcaggtcatcaaattagcaaaatggcttgggaaaggacaaaaatacc 34176620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 154
Target Start/End: Original strand, 38003527 - 38003640
Alignment:
Q  41 caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggaca 140  Q
    ||||||| ||||| ||||||||||||||||||||||| |  ||| ||||||||||||| | | | | ||||||||||||||||||| || | ||||||||    
T  38003527 caatttaaccttgtattgtttaatcatttaaaatttcgttctttgaccaacttaatcactactaagtcatcaaattagcaaaatggtatagaaatggaca 38003626  T
Q  141 aaaataccttcgtc 154  Q
    |||||||| |||||    
T  38003627 aaaataccctcgtc 38003640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 182
Target Start/End: Complemental strand, 38003740 - 38003667
Alignment:
Q  109 atcaaattagcaaaatggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttaccc 182  Q
    |||||||||||||||||||||| |||| |||||||||||| ||| ||||||||| |||||||||||||||||||    
T  38003740 atcaaattagcaaaatggcatgagaatagacaaaaataccatcgccatccattcgtgaaatgacatttttaccc 38003667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 154
Target Start/End: Original strand, 27500172 - 27500273
Alignment:
Q  52 tgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaataccttc 151  Q
    |||||||||||||||| |||||||||||| ||| | ||||||||||| |  || | |||||||||||||||||| |||| ||||||||||||||||| ||    
T  27500172 tgcattgtttaatcatataaaatttcatc-tttgagcaacttaatcactatcaagtcatcaaattagcaaaatgacatgagaatggacaaaaataccctc 27500270  T
Q  152 gtc 154  Q
    |||    
T  27500271 gtc 27500273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 7294181 - 7294278
Alignment:
Q  49 ccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaata 146  Q
    ||||||||| |||||||||||||||||||||| ||| ||| | ||||||| || ||   ||||||||||||||||||||||  |||||||||||||||    
T  7294181 ccttgcattctttaatcatttaaaatttcatcctttgacccagttaatcactgtcagatcatcaaattagcaaaatggcataagaatggacaaaaata 7294278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 2534750 - 2534874
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| ||||||| ||||  ||| |||||||||||||||||||||||||||| ||  | | || | ||||||| ||||||  ||||||||||||||||    
T  2534750 gtaatcgctaatccttgcaaactactcttgcattgtttaatcatttaaaatttcgtccctattcccagttaatcactgccacatcatcaaattagcaaaa 2534849  T
Q  124 tggcatgggaatggacaaaaatacc 148  Q
    ||| |||| ||| ||||||||||||    
T  2534850 tggtatggaaattgacaaaaatacc 2534874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 234111 - 234037
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatca 98  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| || ||| | |||||||||||    
T  234111 gtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgatcaacttaatca 234037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 710522 - 710448
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatca 98  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| || ||| | |||||||||||    
T  710522 gtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgatcaacttaatca 710448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 747734 - 747660
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatca 98  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| || ||| | |||||||||||    
T  747734 gtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgatcaacttaatca 747660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 871629 - 871555
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatca 98  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| || ||| | |||||||||||    
T  871629 gtaattgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgatcaacttaatca 871555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 11761963 - 11762019
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  11761963 ttaatcactgccacgtcatcaaattagcaaaatagcatgggaatggacaaaaatacc 11762019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 34213887 - 34213943
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  34213887 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 34213943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 34665894 - 34665949
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  34665894 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 34665949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 8316961 - 8316879
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  8316961 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccatctccccacttaatcactgccacg 8316879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 13186115 - 13186197
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  13186115 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactgccacg 13186197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 23663887 - 23663805
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  23663887 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 23663805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 36928531 - 36928613
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  36928531 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 36928613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 12273226 - 12273173
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  12273226 gtaatcgttaatcccgtcaatttacccttgcattgtttaatcatttaaaatttc 12273173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 23698617 - 23698564
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  23698617 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 23698564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 39071731 - 39071784
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  39071731 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 39071784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 40318337 - 40318284
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  40318337 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 40318284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 34214504 - 34214449
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||  |||||||||||||||||||||||||||| ||||||||||||    
T  34214504 taatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaatacc 34214449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 34666517 - 34666462
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| ||||||||||||||||||||||| |||| ||||||||||||    
T  34666517 taatcactgccacgtcatcaaattagcaaaatggcatgagaattgacaaaaatacc 34666462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 16388883 - 16388817
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  16388883 gcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 16388817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 4995030 - 4994977
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||| |||||||    
T  4995030 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttcaaatttc 4994977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 36186439 - 36186387
Alignment:
Q  26 taatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||| |||||||| ||||||||| |||||||||||||||||||||||||||    
T  36186439 taatcgctaatcctgacaatttacctttgcattgtttaatcatttaaaatttc 36186387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 38955758 - 38955814
Alignment:
Q  25 gtaatcgttaatcctgc-aatttacccttgcattgtttaatcatttaaaatttcatc 80  Q
    ||||||| ||||||||  ||||||||| |||||||||||||||||||||||||||||    
T  38955758 gtaatcgctaatcctggtaatttacccctgcattgtttaatcatttaaaatttcatc 38955814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 4406027 - 4405980
Alignment:
Q  31 gttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||    
T  4406027 gttaatccttgcaatttacccttgcaatgtttaatcatttaaaatttc 4405980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 75
Target Start/End: Complemental strand, 22915715 - 22915680
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatt 75  Q
    ||||||||||||||||||||||||||||||||||||    
T  22915715 gcaatttacccttgcattgtttaatcatttaaaatt 22915680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 31608871 - 31608804
Alignment:
Q  39 tgcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||||||||||||||| ||||||||||||||||| ||  | | || ||||||||| |||||||    
T  31608871 tgcaatttacccttgcattgtctaatcatttaaaatttcgtccctctccccacttaatcactgccacg 31608804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 1425379 - 1425313
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||||| |||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  1425379 gcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 1425313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 34061686 - 34061621
Alignment:
Q  39 tgcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgcca 104  Q
    ||||| || |||||||||| ||||||||||||||||||| || ||| ||||| ||||||| |||||    
T  34061686 tgcaaattgcccttgcattctttaatcatttaaaatttcgtcctttgaccaagttaatcactgcca 34061621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 42803575 - 42803542
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaa 73  Q
    ||||||||||||||||||||||||||||||||||    
T  42803575 gcaatttacccttgcattgtttaatcatttaaaa 42803542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 77
Target Start/End: Original strand, 38862691 - 38862726
Alignment:
Q  42 aatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||| |||||||||||||||||||||||||||    
T  38862691 aatttacctttgcattgtttaatcatttaaaatttc 38862726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 1425144 - 1425190
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||  || ||| |||||||||||||||||||||    
T  1425144 ttaatcatttaaaatttagtcctttgaccaacttaatcattgccacg 1425190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 13186396 - 13186350
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| |||||| ||||| ||||||| |||||||    
T  13186396 ttaatcatttaaaatttcgtcatttgaccaagttaatcactgccacg 13186350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 23663636 - 23663682
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  23663636 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 23663682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 34685595 - 34685557
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatca 98  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  34685595 ttaatcatttaaaatttcgtcatttgaccaacttaatca 34685557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 36325576 - 36325494
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||| |||||||||| ||||||| ||||||| |  |||||||||||||||||  || ||  ||||||||||||| |||||||    
T  36325576 gtaattgttaatcctggcaatttagccttgcaattgttaatcatttaaaatttggtccttggaccaacttaatcactgccacg 36325494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 36928813 - 36928767
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  36928813 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 36928767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 40318055 - 40318101
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||| | |||||| ||||||||||||| |||||||    
T  40318055 ttaatcatttaaaattgcgtcatttgaccaacttaatcactgccacg 40318101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 8316744 - 8316789
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    |||||||||||||||||| || ||| ||||||||||||| ||||||    
T  8316744 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 8316789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 106
Target Start/End: Original strand, 31608593 - 31608650
Alignment:
Q  49 ccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||  ||||| |||||||||||| |||||| || |||||||||| |||||||    
T  31608593 ccttgcattcattaataatttaaaatttcgtcatttgacaaacttaatcactgccacg 31608650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 35756645 - 35756690
Alignment:
Q  33 taatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||| ||||||| ||||| |||||||||||||||||||||||    
T  35756645 taatcctgacaatttatccttgaattgtttaatcatttaaaatttc 35756690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 38862900 - 38862855
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    |||||||||||||||||| || ||| ||||||||||||| ||||||    
T  38862900 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 38862855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 39071979 - 39071934
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    |||||||||||||||||| || ||| ||||||||||||| ||||||    
T  39071979 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 39071934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 4e-62; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 27068965 - 27069137
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| ||||||| ||||||||||||||||    
T  27068965 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaa 27069064  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||| |||||| ||||    
T  27069065 tggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttatccctgtcttcatcttc 27069137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 52573283 - 52573455
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| |||||||| ||| |||||||||||||||||||||||| || ||| ||||||||||||| ||||||| ||||||||||||||||    
T  52573283 gtaatcgctaatcctggcaatttactcttacattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaa 52573382  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||    
T  52573383 tggcatgagaatggacaaaaataccctcgtcatccattcatgaaatgacatttttacccctgtcttcatcttc 52573455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 25 - 189
Target Start/End: Original strand, 54858615 - 54858780
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| ||||||| ||||||||||||||||    
T  54858615 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaa 54858714  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatctt 189  Q
    |||||||||||  |||||||||||| || |||||||||| ||||||||||||||||||||| ||||    
T  54858715 tggcatgggaacagacaaaaataccctcatcatccattcgtgaaatgacatttttacccctgtctt 54858780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 10408260 - 10408088
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| ||||||  ||||||||||||||||    
T  10408260 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacatcatcaaattagcaaaa 10408161  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||  ||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  10408160 tgatatgagaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 10408088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 22718310 - 22718138
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||| |||||||||| |||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||  | |||| ||||||||||||||||    
T  22718310 gtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcatttgaccaatttaatcaccgacacgtcatcaaattagcaaaa 22718211  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  22718210 tgacatgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 22718138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 39667147 - 39666975
Alignment:
Q  25 gtaatcgttaatcctgc-aatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||||||||||||  || ||||||||||||||||||||||||||||||||| || ||| |||||||||||||  |||||| ||||||||||||||||    
T  39667147 gtaatcgttaatcctggtaaattacccttgcattgtttaatcatttaaaatttcgtcttttgaccaacttaatcaccgccacgtcatcaaattagcaaaa 39667048  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||| | |||||| ||||    
T  39667047 tggcatgagaatggacaaaaataccatcgtcatccattcgtgaaatgacatttttacccttgtcttcatcttc 39666975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 51859478 - 51859634
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    |||||||||||||||||| ||||||||||||||||||| || ||| ||||||||||||| ||||||  ||||||||||||||||||||||| ||||||||    
T  51859478 gcaatttacccttgcattatttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacatcatcaaattagcaaaatggcatgagaatggac 51859577  T
Q  140 aaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  51859578 aaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 51859634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 22986906 - 22987078
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||| |||||||||| |||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||||  | |||| ||||||||||||||||    
T  22986906 gtaattgttaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcatttgaccaatttaatcaccgacacgtcatcaaattagcaaaa 22987005  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    || ||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  22987006 tgacatgggaatagacaaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 22987078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 27891655 - 27891811
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    |||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| || |||| |||||||||||||||||| |||||||||||||    
T  27891655 gcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggac 27891754  T
Q  140 aaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||| | ||||||||||||| |||||||||||||||||| || |||||| ||||    
T  27891755 aaaaatatcctcgtcatccattcgtgaaatgacatttttacctctgtcttcatcttc 27891811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 50504196 - 50504024
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||| || ||| || |||||||||| | ||| | ||||||||||||||||    
T  50504196 gtaatcgttaatccaggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgacaaacttaatcactcccaagtcatcaaattagcaaaa 50504097  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| | |||||| ||||    
T  50504096 tgacatgggaatggacaaaaataccctcgtcatccattcttgaaatgacatttttacccatgtcttcatcttc 50504024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 39700964 - 39701136
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| |||| ||||||| |||| |||||| ||||||||||||||| ||| ||||||||||||| |  |||| ||||||||||||||||    
T  39700964 gtaatcgctaatcctgacaatatacccttacattatttaattatttaaaatttcatcctttgaccaacttaatcactctcacgtcatcaaattagcaaaa 39701063  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  39701064 tggcatgggaatggacaaaaacaccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 39701136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 40 - 189
Target Start/End: Complemental strand, 45463428 - 45463279
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    ||||| |||||||||||||||||||||||||||||||  |  ||| ||||||||||||| | ||||| ||||||||||||||||||||||||||||||||    
T  45463428 gcaatctacccttgcattgtttaatcatttaaaattttgttctttgaccaacttaatcactaccacgtcatcaaattagcaaaatggcatgggaatggac 45463329  T
Q  140 aaaaataccttcgtcatccattcatgaaatgacatttttacccctatctt 189  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||||| ||||    
T  45463328 aaaaacaccctcgtcatccattcgtgaaatgacatttttacccctgtctt 45463279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 9731583 - 9731411
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||| ||||| ||||||||||||||||||||||| |  ||| || |||||||||| ||||||| ||||||||||||||||    
T  9731583 gtaatcgctaatcctgacaatttatccttgtattgtttaatcatttaaaatttcgttctttgactaacttaatcactgccacgtcatcaaattagcaaaa 9731484  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||| ||||||||| | |||||||| |||| ||||||||||||||||||| | |||||| ||||    
T  9731483 tggcatgggaatgaacaaaaatatcctcgtcatctattcgtgaaatgacatttttacccttgtcttcatcttc 9731411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 50503880 - 50504010
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||| | || ||| ||||||||||||| ||||||| ||||||||||||||||    
T  50503880 gtaatcgttaatcttagcaatttacccttgcattgtttaatcatttaaaattccgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaa 50503979  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    ||||||||||||||||||||||||| |||||    
T  50503980 tggcatgggaatggacaaaaataccctcgtc 50504010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 11524004 - 11524134
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||  ||| | ||||||||||||||||    
T  11524004 gtaatcgttaatcctggcaatatacccttgcattgtttaatcatttaaaatttcgtcatttgaccaacttaatcatcaccaagtcatcaaattagcaaaa 11524103  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    |||||||||||| |||||||||||| |||||    
T  11524104 tggcatgggaatagacaaaaataccctcgtc 11524134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 45463128 - 45463258
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| | ||| | ||||||||||||||||    
T  45463128 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactaccaagtcatcaaattagcaaaa 45463227  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    | ||||||||||||||||||||||| |||||    
T  45463228 tagcatgggaatggacaaaaataccctcgtc 45463258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 54858931 - 54858801
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| | ||| | ||||||||||||||||    
T  54858931 gtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagcaaaa 54858832  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    ||||||| ||||||||||||||||| |||||    
T  54858831 tggcatgtgaatggacaaaaataccctcgtc 54858801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 5818146 - 5818024
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || || | | ||||||||||||||    
T  5818146 gtaatcgttaatcctgtcaatttacccttgcattgtttaatcatttaaaatttcatcctttgaccaacttaatcactgtcaagtcttcaaattagcaaaa 5818047  T
Q  124 tggcatgggaatggacaaaaata 146  Q
    |||||||||||| ||||||||||    
T  5818046 tggcatgggaatagacaaaaata 5818024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 39701280 - 39701150
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||| ||||| | ||||||||||||||||    
T  39701280 gtaatcgttaatcttgacaatttacctttgcattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactgccaagtcatcaaattagcaaaa 39701181  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    | | ||||||||||||||||||||| |||||    
T  39701180 tagtatgggaatggacaaaaataccctcgtc 39701150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 3032637 - 3032760
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||  |||| |  |||||||||||||||    
T  3032637 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcatttgaccaacttaatcaccgccaagttatcaaattagcaaaa 3032736  T
Q  124 tggcatgggaatggacaaaaatac 147  Q
    |||||| |||||||||||||||||    
T  3032737 tggcataggaatggacaaaaatac 3032760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 27069265 - 27069151
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    |||||||||||||||||||||||||||||||||||||| || ||| ||||| |||||||  |||| | ||||||||||||||||||||||||||||||||    
T  27069265 gcaatttacccttgcattgtttaatcatttaaaatttcgtcttttgaccaatttaatcaccgccaagtcatcaaattagcaaaatggcatgggaatggac 27069166  T
Q  140 aaaaataccttcgtc 154  Q
    ||||||||| |||||    
T  27069165 aaaaataccctcgtc 27069151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 10407944 - 10408068
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| | ||||||||||| | ||| | ||||||||||||||||    
T  10407944 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgatcaacttaatcactaccaagtcatcaaattagcaaaa 10408043  T
Q  124 tggcatgggaatggacaaaaatacc 148  Q
    |||||||| ||||||||||||||||    
T  10408044 tggcatggaaatggacaaaaatacc 10408068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 112 - 196
Target Start/End: Complemental strand, 11524232 - 11524148
Alignment:
Q  112 aaattagcaaaatggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  11524232 aaattagcaaaatggcatgggaatggacaaaaatatcctcgtcatccattcatgaaatgatatttttacccctatcttcatcttc 11524148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 51859777 - 51859658
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||| ||||| ||||||||||||||||||||||| || ||| | ||||||||||| | ||| | ||||||||||||||||    
T  51859777 gtaatcgctaatcctggcaatttatccttgtattgtttaatcatttaaaatttcgtcctttgatcaacttaatcactcccaagtcatcaaattagcaaaa 51859678  T
Q  124 tggcatgggaatggacaaaa 143  Q
    ||||||||||||||||||||    
T  51859677 tggcatgggaatggacaaaa 51859658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 52573583 - 52573469
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    |||||||||| ||||||||||||||||||||||||| | || ||| | ||| ||||||| ||||||| |||||||||||||| |||||||| ||||||||    
T  52573583 gcaatttaccattgcattgtttaatcatttaaaattccgtcctttgatcaatttaatcactgccacgtcatcaaattagcaatatggcatgagaatggac 52573484  T
Q  140 aaaaataccttcgtc 154  Q
    ||||||||| |||||    
T  52573483 aaaaataccctcgtc 52573469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 45 - 154
Target Start/End: Original strand, 39666852 - 39666961
Alignment:
Q  45 ttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaa 144  Q
    ||||| ||||||||||||||||||||||||||| || ||  | ||||||||||| | ||| | |||||||||||||||||||||||||||||||||||||    
T  39666852 ttacctttgcattgtttaatcatttaaaatttcgtccttcgagcaacttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaa 39666951  T
Q  145 taccttcgtc 154  Q
    |||| |||||    
T  39666952 taccctcgtc 39666961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 55867487 - 55867363
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||||||||||| ||||  |||||||||||||||||||||||||||||||| ||  | | || | ||||||| ||||||| ||||||||||||||||    
T  55867487 gtaatcgttaatccttgcaaactacccttgcattgtttaatcatttaaaatttcgtccctattcccagttaatcactgccacgtcatcaaattagcaaaa 55867388  T
Q  124 tggcatgggaatggacaaaaatacc 148  Q
    || ||| ||||| ||||||||||||    
T  55867387 tgacattggaattgacaaaaatacc 55867363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 22717994 - 22718124
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| |||| ||||||||| |||||||||||||||||||||| || ||| |||||||||||||   ||| | ||||||||||||||||    
T  22717994 gtaatcgctaatcctgacaatatacccttgctttgtttaatcatttaaaatttcgtcctttgaccaacttaatcaccaccaagtcatcaaattagcaaaa 22718093  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    ||| ||  |||| |||||||||||| |||||    
T  22718094 tggtataagaatagacaaaaataccctcgtc 22718124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 22923193 - 22923287
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattag 118  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||| ||||| ||||||| || |||| |||||||||||    
T  22923193 gtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtcatttgaccaatttaatcactgacacgtcatcaaattag 22923287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 22927846 - 22927940
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattag 118  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||| ||||| ||||||| || |||| |||||||||||    
T  22927846 gtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtcatttgaccaatttaatcactgacacgtcatcaaattag 22927940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 22984125 - 22984219
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattag 118  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||| ||||| ||||||| || |||| |||||||||||    
T  22984125 gtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtcatttgaccaatttaatcactgacacgtcatcaaattag 22984219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 22987222 - 22987092
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| |||| ||||||||| |||||||||||||||||||||| || ||| |||||||||||||   ||| | ||||||||||||||||    
T  22987222 gtaatcgctaatcctgacaatatacccttgctttgtttaatcatttaaaatttcgtcctttgaccaacttaatcaccaccaagtcatcaaattagcaaaa 22987123  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    ||| ||  |||| |||||||||||| |||||    
T  22987122 tggtataagaatagacaaaaataccctcgtc 22987092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 22997713 - 22997807
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattag 118  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||| ||||| ||||||| || |||| |||||||||||    
T  22997713 gtaatcgttaatcctgacaatttactcttgcattgtttaatcatttaaaatttcgtcatttgaccaatttaatcactgacacgtcatcaaattag 22997807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 158
Target Start/End: Complemental strand, 32063709 - 32063575
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||| ||| ||| |||||||||||  |||||||||||||||||| | ||  |  ||  ||||||| ||||||||| ||||||||||||||||    
T  32063709 gtaatcgttaatactggcaaattacccttgcaaagtttaatcatttaaaattccgtccctgcacgcacttaattattgccacgtcatcaaattagcaaaa 32063610  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatcc 158  Q
    ||||||| ||||||||||||||||| || ||||||    
T  32063609 tggcatgagaatggacaaaaataccctcatcatcc 32063575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 11448102 - 11447978
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| ||||||| |||| ||||||||||||||||||||||||||||||||| ||| | |  | | ||||||| ||||||  |||||||||| |||||    
T  11448102 gtaatcgctaatccttgcaaattacccttgcattgtttaatcatttaaaatttcgtcactatttccagttaatcactgccacatcatcaaattaacaaaa 11448003  T
Q  124 tggcatgggaatggacaaaaatacc 148  Q
    |||||||  ||| ||||||||||||    
T  11448002 tggcatgaaaattgacaaaaatacc 11447978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 23455077 - 23455133
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23455077 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaatacc 23455133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 30641573 - 30641706
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||||||||||| |||| ||||| || ||  |||||||||||||||||||| ||  |  ||| ||||||| | || |||| ||||||||||||||||    
T  30641573 gtaatcgttaatccttgcaaattaccattacaaagtttaatcatttaaaatttcgtccctacacc-acttaattactgtcacgtcatcaaattagcaaaa 30641671  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatcc 158  Q
    || ||||||||||||||||| |||| || ||||||    
T  30641672 tgtcatgggaatggacaaaattaccctcatcatcc 30641706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 145
Target Start/End: Complemental strand, 50751871 - 50751750
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||| ||| ||||||||||||||||||||||||| ||| ||  |  ||| ||||||  | ||||||  |||||||||| |||||    
T  50751871 gtaatcgctaatcctgacaaattaaccttgcattgtttaatcatttaaaaattcgtccctgaacccacttaaagactgccacatcatcaaattaacaaaa 50751772  T
Q  124 tggcatgggaatggacaaaaat 145  Q
    | ||||||||||||||||||||    
T  50751771 tagcatgggaatggacaaaaat 50751750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 23455666 - 23455610
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  23455666 ttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacc 23455610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 35028356 - 35028289
Alignment:
Q  39 tgcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||||||||||||||||||||||||||||||||| ||| | | || ||||||||| |||||||    
T  35028356 tgcaatttacccttgcattgtttaatcatttaaaatttcgtcactctccccacttaatcactgccacg 35028289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 38982572 - 38982517
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  38982572 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 38982517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 52815787 - 52815842
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  52815787 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 52815842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 52816399 - 52816344
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  52816399 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 52816344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 56556706 - 56556761
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  56556706 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 56556761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 158
Target Start/End: Complemental strand, 40317036 - 40316902
Alignment:
Q  25 gtaatcgttaatcctgcaat-ttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||  |||||||| ||  |||||||| ||||||||| | ||  |  ||| ||||||| | | ||||  ||||||||||||||||    
T  40317036 gtaatcgttaatcctggaaaattaccctttcaaagtttaatcctttaaaattccgtccctacacctacttaattactaccacatcatcaaattagcaaaa 40316937  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatcc 158  Q
    || |||||||||||||||||||||| || ||||||    
T  40316936 tgacatgggaatggacaaaaataccctcatcatcc 40316902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 158
Target Start/End: Complemental strand, 40327110 - 40326976
Alignment:
Q  25 gtaatcgttaatcctgcaat-ttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||  |||||||| ||  |||||||| ||||||||| | ||  |  ||| ||||||| | | ||||  ||||||||||||||||    
T  40327110 gtaatcgttaatcctggaaaattaccctttcaaagtttaatcctttaaaattccgtccctacacctacttaattactaccacatcatcaaattagcaaaa 40327011  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatcc 158  Q
    || |||||||||||||||||||||| || ||||||    
T  40327010 tgacatgggaatggacaaaaataccctcatcatcc 40326976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 49879549 - 49879467
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  49879549 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 49879467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 147450 - 147495
Alignment:
Q  100 tgccacgacatcaaattagcaaaatggcatgggaatggacaaaaat 145  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  147450 tgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaat 147495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 7451889 - 7451942
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  7451889 gtaatcgttaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 7451942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 27149351 - 27149298
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaactt 93  Q
    |||||||||||||||||||||||||||||||||||||| || ||| ||||||||    
T  27149351 gcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaactt 27149298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 37248291 - 37248344
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  37248291 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 37248344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 52909308 - 52909361
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  52909308 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 52909361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 54087068 - 54087015
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  54087068 gtaatcgttaatcatgacaatttacccttgcattgtttaatcatttaaaatttc 54087015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 56557301 - 56557246
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||| ||||| ||||||||||||    
T  56557301 taatcactgccacgtcatcaaattagcaaaatggcataggaattgacaaaaatacc 56557246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 14801791 - 14801873
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| ||||||||||||| ||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  14801791 gtaatcgctaatcctgacaatttacccttgtattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 14801873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 18831404 - 18831486
Alignment:
Q  25 gtaatcgttaatcctgc-aatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  18831404 gtaatcgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttcgtctctctccccacttaatcactgccacg 18831486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 34765753 - 34765671
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  34765753 gtaatcgctaatcctggcaatttacctttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 34765671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 36009186 - 36009104
Alignment:
Q  25 gtaatcgttaatcctgcaa-tttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||| || ||||||| |||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  36009186 gtaatcgttaatcctggaaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 36009104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 24711166 - 24711219
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||||||||||||    
T  24711166 gtaatcgctaatcctggcaatttaccgttgcattgtttaatcatttaaaatttc 24711219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 35508613 - 35508560
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||||||    
T  35508613 gtaatcgttaattctaacaatttacccttgcattgtttaatcatttaaaatttc 35508560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 44967411 - 44967358
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||| ||||||||||||||||||||||||||    
T  44967411 gtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttc 44967358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 50750942 - 50751035
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaatta 117  Q
    ||||||| |||||||| ||| ||| ||||||||||||||||||||||||| ||| ||| |  ||| ||||||| | ||||||| ||||||||||    
T  50750942 gtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaaattcgtcactgaacccacttaatgactgccacgtcatcaaatta 50751035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 51692608 - 51692661
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||||||||||||||||||| ||||||||||    
T  51692608 gtaatcgctaatcctgacaatttacccttgcattgtttaatcacttaaaatttc 51692661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 3032833 - 3032781
Alignment:
Q  144 ataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  3032833 ataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 3032781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 5369002 - 5369054
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaattt 76  Q
    ||||||| |||||||| |||||||||| |||||||||||||||||||||||||    
T  5369002 gtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaattt 5369054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 17356006 - 17356062
Alignment:
Q  50 cttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||  |||||||||||||||||| |||||| ||||||||||||| |||||||    
T  17356006 cttgcattcattaatcatttaaaatttcgtcatttgaccaacttaatcactgccacg 17356062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 50419009 - 50418957
Alignment:
Q  26 taatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||| |||||||| |||| ||||||||||||||||||||||||||||||||    
T  50419009 taatcgctaatcctggcaatctacccttgcattgtttaatcatttaaaatttc 50418957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 13058092 - 13058174
Alignment:
Q  25 gtaatcgttaatcctgc-aatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| ||||||||  ||||||||| |||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  13058092 gtaatcgctaatcctggtaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 13058174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 18831654 - 18831616
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatca 98  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  18831654 ttaatcatttaaaatttcatcatttgaccaacttaatca 18831616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 23613380 - 23613446
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||||| |||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  23613380 gcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 23613446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 37976244 - 37976290
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| |||||||||||||||||||||    
T  37976244 ttaatcatttaaaatttcgtcctttgaccaacttaatcattgccacg 37976290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 43155869 - 43155787
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||| ||||||| || |||||| ||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  43155869 gtaatcgttaatcctggcaatttatccctgcattatttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 43155787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 106
Target Start/End: Original strand, 53701875 - 53701949
Alignment:
Q  33 taatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  53701875 taatcctgacaatttatccttgcattgtttaatcatttaaaatttcttccctctccccacttaatcactgccacg 53701949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 53702149 - 53702103
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||||    
T  53702149 ttaatcatttaaaatttcgtcatttgaccaacttaatcaatgccacg 53702103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 1179137 - 1179092
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  1179137 ttaatcatttaaaatttcatcctttaaccaacttaatcactgccac 1179092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 15508046 - 15507993
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| ||||||||| |||||| ||||||||||||||||||||    
T  15508046 gtaatcgctaatcctgacaatttaccattgcatggtttaatcatttaaaatttc 15507993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 16605657 - 16605710
Alignment:
Q  25 gtaatcgttaatcctgc-aatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||| || ||||| ||||||||||||||||| ||||||||||||||||||    
T  16605657 gtaatcgtcaaacctgccaatttacccttgcattgattaatcatttaaaatttc 16605710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 38813678 - 38813731
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaata 146  Q
    |||||| ||||||| | |||||||||||||||| ||||||||| ||||||||||    
T  38813678 taatcactgccacgtcttcaaattagcaaaatgacatgggaattgacaaaaata 38813731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 24411413 - 24411461
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaa 72  Q
    ||||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  24411413 gtaatcgctaaccctgacaatttacccttgcattgtttaatcatttaaa 24411461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 104
Target Start/End: Complemental strand, 37976526 - 37976446
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgcca 104  Q
    ||||||| |||| ||| ||||||| | ||||||||||||||||||||||||||| ||| | | || ||||||||| |||||    
T  37976526 gtaatcgctaattctgacaatttatcattgcattgtttaatcatttaaaatttcgtcactctccccacttaatcactgcca 37976446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 24711450 - 24711371
Alignment:
Q  28 atcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||| ||||  || ||||||| |  |||||||||||||||||| |||||| ||||| ||||||| |||||||    
T  24711450 atcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcatttgaccaatttaatcactgccacg 24711371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 38814303 - 38814248
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||| |||| | || ||||||||||||    
T  38814303 taatcactgccacgtcatcaaattagcaaaatgacatgagcattgacaaaaatacc 38814248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 145
Target Start/End: Complemental strand, 148049 - 148007
Alignment:
Q  103 cacgacatcaaattagcaaaatggcatgggaatggacaaaaat 145  Q
    |||| |||||||||||||||||||||||  |||||||||||||    
T  148049 cacgtcatcaaattagcaaaatggcatgaaaatggacaaaaat 148007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 39538161 - 39538259
Alignment:
Q  50 cttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||||| ||||||||||||||||||| ||  || | | | ||||||  || |||| |||||||||||||||||| ||||  | || |||||||||||    
T  39538161 cttgcattctttaatcatttaaaatttcgtcccttaatctaattaatcgctgtcacgtcatcaaattagcaaaatgacatgtaattgaacaaaaatacc 39538259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 43155620 - 43155666
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||  |||||| ||||||||||||| |||||||    
T  43155620 ttaatcatttaaaatttagtcatttgaccaacttaatcactgccacg 43155666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 46661251 - 46661205
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  46661251 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 46661205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 50418723 - 50418805
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||||||||| ||||  || ||||||| |  |||||||||||||||||| || ||| ||||| ||||||| |||||||    
T  50418723 gtaatcgttaatccttgcaaactagccttgcaatcattaatcatttaaaatttcgtcctttgaccaatttaatcactgccacg 50418805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 14802072 - 14802027
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    |||||||||||||||||| || ||| ||||||||||||| ||||||    
T  14802072 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 14802027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 17356279 - 17356242
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  17356279 gcaatttactcttgcattgtttgatcatttaaaatttc 17356242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 39539291 - 39539238
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||| || |||| ||| ||||||||| |||||||||||||||||||    
T  39539291 gtaatcgttaattcttgcaaattagccttgcattctttaatcatttaaaatttc 39539238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 53129879 - 53129826
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| ||||||| |||||||||||| ||||||||| ||| |||||||||||    
T  53129879 gtaatcgctaatccttgcaatttaccctcgcattgtttcatcgtttaaaatttc 53129826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 9e-60; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 22503145 - 22502973
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||||||| |||| |||||| ||||||||||||| ||||||| ||||||||||||||||    
T  22503145 gtaatcgctaatcctggcaatttatccttgcattgtttaatcatttaaattttcgtcatttgaccaacttaatcactgccacgtcatcaaattagcaaaa 22503046  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  22503045 tgacatgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 22502973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 25 - 191
Target Start/End: Original strand, 21836086 - 21836252
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| || |||||||||| ||||||| ||||||||||||||||    
T  21836086 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgac-aacttaatcactgccacgtcatcaaattagcaaaa 21836184  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttca 191  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||    
T  21836185 tggcatgggaatggacaaaaataccctcgtcatccattcttgaaatgacatttttacccctgtcttca 21836252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 7160859 - 7161031
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| |||||||| |||||||||||||||||||||||||||| || ||| ||||||||||||| | ||||| ||||||||||||||||    
T  7160859 gtaatcgctaatcctggcaatttactcttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactaccacgtcatcaaattagcaaaa 7160958  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    | ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  7160959 tagcatgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 7161031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 31407249 - 31407077
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| || |||| ||||||||||||||||    
T  31407249 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcacgtcatcaaattagcaaaa 31407150  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    || |||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||| |||||| ||||    
T  31407149 tgacatgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttatccctgtcttcatcttc 31407077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 40 - 191
Target Start/End: Complemental strand, 7905598 - 7905447
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    |||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  7905598 gcaatttacccttgcattgtttaatcatttcaaatttcgtcatttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggac 7905499  T
Q  140 aaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttca 191  Q
    ||||||||| ||||||||||||  |||||||||||| |||||||| ||||||    
T  7905498 aaaaataccctcgtcatccatttgtgaaatgacattcttacccctgtcttca 7905447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 45 - 196
Target Start/End: Complemental strand, 15913898 - 15913747
Alignment:
Q  45 ttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaa 144  Q
    |||||| || |||||||||| |||||||||||| || ||| ||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||    
T  15913898 ttacccctgtattgtttaataatttaaaatttcgtcctttgaccaacttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaa 15913799  T
Q  145 taccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    |||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  15913798 taccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 15913747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 12065290 - 12065447
Alignment:
Q  40 gcaatttacccttgcattgttt-aatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatgga 138  Q
    |||||||||||||| ||||||| ||||||||||||||||  | ||| ||||||||||||| || || | |||||||||||||||||||||||||||||||    
T  12065290 gcaatttacccttgtattgttttaatcatttaaaatttcgacctttgaccaacttaatcactgtcaggtcatcaaattagcaaaatggcatgggaatgga 12065389  T
Q  139 caaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    |||||||||| ||||||||||||  ||||||||||||||||||| | |||||| ||||    
T  12065390 caaaaataccctcgtcatccatttgtgaaatgacatttttacccttgtcttcatcttc 12065447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 7905298 - 7905428
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||  | || | ||||||||||||||||    
T  7905298 gtaatcgttaatcctggcaatttacccttgcattatttaatcatttaaaatttcgtcatttgaccaacttaatcaccgtcaagtcatcaaattagcaaaa 7905397  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    ||||| ||||||||||||||||||| |||||    
T  7905398 tggcacgggaatggacaaaaataccctcgtc 7905428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 21836401 - 21836279
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| ||||| | |||||||||| |||||    
T  21836401 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccaagtcatcaaattaacaaaa 21836302  T
Q  124 tggcatgggaatggacaaaaata 146  Q
    |||||||||||||||||||||||    
T  21836301 tggcatgggaatggacaaaaata 21836279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 22502829 - 22502953
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| | ||||| | ||||||||||||||||    
T  22502829 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaataactgccaagtcatcaaattagcaaaa 22502928  T
Q  124 tggcatgggaatggacaaaaatacc 148  Q
    ||| ||| |||||||||||||||||    
T  22502929 tggtatgagaatggacaaaaatacc 22502953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 33 - 154
Target Start/End: Complemental strand, 7161167 - 7161045
Alignment:
Q  33 taatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgg 131  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||    || | ||||||||||||||||| ||||||    
T  7161167 taatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcatttgaccaacttaatcaccatcaagtcatcaaattagcaaaattgcatgg 7161068  T
Q  132 gaatggacaaaaataccttcgtc 154  Q
    ||||||||||||||||| |||||    
T  7161067 gaatggacaaaaataccatcgtc 7161045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 15913621 - 15913733
Alignment:
Q  42 aatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaa 141  Q
    |||||||||||||||||||||||||||||||||||| |||||| | ||||||||||| | ||| | |||||||||||||||||||||||| ||| |||||    
T  15913621 aatttacccttgcattgtttaatcatttaaaatttcgtcatttgaacaacttaatcactaccaagtcatcaaattagcaaaatggcatggaaattgacaa 15913720  T
Q  142 aaataccttcgtc 154  Q
    ||||||| |||||    
T  15913721 aaataccctcgtc 15913733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 146
Target Start/End: Original strand, 6517558 - 6517679
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| || ||| ||||||||||||| | ||| | ||||||||||||||||    
T  6517558 gtaatcgctaatcctggcaatttacc-ttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagcaaaa 6517656  T
Q  124 tggcatgggaatggacaaaaata 146  Q
    ||||||||||||| |||||||||    
T  6517657 tggcatgggaatgaacaaaaata 6517679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 8089499 - 8089622
Alignment:
Q  26 taatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaat 124  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||  || ||| ||||||| |  | |||| |||||||||| ||||||    
T  8089499 taatcgttaatccttgcaaattacccttgcattgtttaatcatttaaaatttcgtcccttaacccacttaatgaccgacacgtcatcaaattaacaaaat 8089598  T
Q  125 ggcatgggaatggacaaaaatacc 148  Q
    ||||||||||||||||||||||||    
T  8089599 ggcatgggaatggacaaaaatacc 8089622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 10781529 - 10781407
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||||||||  |  ||| ||||||||||||| | ||| | ||||||||| ||||||    
T  10781529 gtaatcgttaatcctgacaatttatccttgcattgtttaattatttaaaattttgttctttgaccaacttaatcactaccaagtcatcaaattcgcaaaa 10781430  T
Q  124 tggcatgggaatggacaaaaata 146  Q
    |||||||||||||||||||||||    
T  10781429 tggcatgggaatggacaaaaata 10781407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 31406933 - 31407063
Alignment:
Q  25 gtaatcgttaatcctgc-aatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||||||||||||  |||||  ||||||||| ||||||||||||||||||| || ||| || |||||||||| | ||| | ||||||||||||||||    
T  31406933 gtaatcgttaatcctggtaatttgtccttgcattatttaatcatttaaaatttcgtcctttgacaaacttaatcactcccaagtcatcaaattagcaaaa 31407032  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    |||||||| |||||||||||||||| |||||    
T  31407033 tggcatggaaatggacaaaaataccctcgtc 31407063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 196
Target Start/End: Original strand, 10781248 - 10781385
Alignment:
Q  63 atcatttaaaatttcatcattttaccaacttaatcattgccacg-----acatcaaattagcaaaatggcatgggaatggacaaaaataccttcgtcatc 157  Q
    ||||||||||||||| || ||| ||||||||||||| | |||||     | || |||||||||||||| ||||| |||||||||||||| | ||||||||    
T  10781248 atcatttaaaatttcgtc-tttgaccaacttaatcactaccacgtcattaaattaaattagcaaaatgccatggtaatggacaaaaatatcctcgtcatc 10781346  T
Q  158 cattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||| ||||||||||||||||||||| |||||| ||||    
T  10781347 cattcgtgaaatgacatttttacccctgtcttcatcttc 10781385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 14657185 - 14657130
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  14657185 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 14657130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 33400090 - 33400145
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  33400090 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 33400145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 3059312 - 3059365
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  3059312 gtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttc 3059365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 20651141 - 20651186
Alignment:
Q  100 tgccacgacatcaaattagcaaaatggcatgggaatggacaaaaat 145  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  20651141 tgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaat 20651186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 30803916 - 30803969
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  30803916 gtaatcgttaatcctggcaatttacccttacattgtttaatcatttaaaatttc 30803969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 33517589 - 33517642
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  33517589 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 33517642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 4117524 - 4117468
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||| ||||||  |||||||||||||||||||||||||||| ||||||||||||    
T  4117524 ttaatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaatacc 4117468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 21628086 - 21628034
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaattt 76  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  21628086 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaattt 21628034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 32593546 - 32593625
Alignment:
Q  26 taatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgcca 104  Q
    |||||| |||||||| |||||||||||||||||  |||||||||||||||||| || ||  ||||||||||||| |||||    
T  32593546 taatcgctaatcctgacaatttacccttgcatttgttaatcatttaaaatttcgtctttggaccaacttaatcactgcca 32593625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 139883 - 139949
Alignment:
Q  59 tttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatg 125  Q
    ||||||||||||||||||||||| || | | ||||||| | ||||||| ||||||||||||||||||    
T  139883 tttaatcatttaaaatttcatcacttaatccacttaatgactgccacgtcatcaaattagcaaaatg 139949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 147904 - 147970
Alignment:
Q  59 tttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatg 125  Q
    ||||||||||||||||||||||| || | | ||||||| | ||||||| ||||||||||||||||||    
T  147904 tttaatcatttaaaatttcatcacttaatccacttaatgactgccacgtcatcaaattagcaaaatg 147970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 104
Target Start/End: Original strand, 11392911 - 11392973
Alignment:
Q  42 aatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgcca 104  Q
    |||||||||||||||||||||||||||||||||||| ||  | | |||||||||||| |||||    
T  11392911 aatttacccttgcattgtttaatcatttaaaatttcgtctatctcccaacttaatcactgcca 11392973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 30337504 - 30337586
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| |||||||||||||||||| |||||||||||||||||| ||  | | || ||||||||| |||||||    
T  30337504 gtaatcgctaatcctggcaatttacccttgcattggttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 30337586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 30725814 - 30725867
Alignment:
Q  25 gtaatcgttaatcctgc-aatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| ||||||||| |||||||||||||| |||||||||||||||||||||    
T  30725814 gtaatcgctaatcctgccaatttacccttgcactgtttaatcatttaaaatttc 30725867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 14656603 - 14656659
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||| ||||| | ||||||||||| |||||||||||||||| ||||||||||||    
T  14656603 ttaatcactgccatgtcatcaaattagtaaaatggcatgggaattgacaaaaatacc 14656659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 17734536 - 17734484
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaattt 76  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||||||||    
T  17734536 gtaatcgctaatcctatcaatttacccttgcattgtttaatcatttaaaattt 17734484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 12080707 - 12080744
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  12080707 gcaatttacccctgcattgtttaatcatttaaaatttc 12080744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 145
Target Start/End: Complemental strand, 20651984 - 20651899
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaat 145  Q
    |||||||||||||||||| ||  |  ||| | ||||| | ||||||| ||| |||||||||||||| |||||||||||| ||||||    
T  20651984 ttaatcatttaaaatttcgtccctgaacccagttaattactgccacgtcattaaattagcaaaatgacatgggaatggataaaaat 20651899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 33401095 - 33401046
Alignment:
Q  100 tgccacgacatcaaattagcaaaa-tggcatgggaatggacaaaaatacc 148  Q
    ||||||| |||||||||||||||| |||||||||||| ||||||||||||    
T  33401095 tgccacgtcatcaaattagcaaaaatggcatgggaattgacaaaaatacc 33401046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 33647018 - 33647071
Alignment:
Q  25 gtaatcgttaatcctgc-aatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| ||||| ||| |||||||||||||||| |||||||||||||||||||    
T  33647018 gtaatcgctaatcttgccaatttacccttgcattatttaatcatttaaaatttc 33647071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 1661391 - 1661351
Alignment:
Q  108 catcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  1661391 catcaaattatcaaaatggcatgggaattgacaaaaatacc 1661351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 3059593 - 3059549
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgcca 104  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||    
T  3059593 ttaatcatttaaaatttcatcttttgaccaacttaatcactgcca 3059549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 3176353 - 3176301
Alignment:
Q  99 ttgccacgacatcaaattagcaaaatggcatgggaatggacaaaaataccttc 151  Q
    |||||||| |||||||||| |||||| | ||| ||||||||||||||||||||    
T  3176353 ttgccacgtcatcaaattaccaaaatagtatgagaatggacaaaaataccttc 3176301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 4116922 - 4116978
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||| ||||||   ||||||||||||||||||| ||||||| ||||||||||||    
T  4116922 ttaatcactgccacattatcaaattagcaaaatggcgtgggaattgacaaaaatacc 4116978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 21627804 - 21627850
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  21627804 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 21627850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 30726096 - 30726050
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  30726096 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 30726050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 30804198 - 30804152
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  30804198 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 30804152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 148
Target Start/End: Complemental strand, 33400909 - 33400875
Alignment:
Q  114 attagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||||||||||||||||||| ||||||||||||    
T  33400909 attagcaaaatggcatgggaattgacaaaaatacc 33400875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 33517871 - 33517825
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  33517871 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 33517825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 11393141 - 11393096
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    |||||||||| ||||||| |||||| ||||||||||||| ||||||    
T  11393141 ttaatcatttcaaatttcgtcatttgaccaacttaatcactgccac 11393096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 145
Target Start/End: Complemental strand, 13379771 - 13379734
Alignment:
Q  108 catcaaattagcaaaatggcatgggaatggacaaaaat 145  Q
    |||||||||||||||||||  |||||||||||||||||    
T  13379771 catcaaattagcaaaatggtttgggaatggacaaaaat 13379734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 26463238 - 26463287
Alignment:
Q  29 tcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||| ||| |||||||||||  ||||||||||||||||||||    
T  26463238 tcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttc 26463287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 15115395 - 15115487
Alignment:
Q  26 taatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaatta 117  Q
    |||||||||||||| |||| ||| |||||||  |||||||||||||||||||  || ||  ||| ||||||| | | ||||| ||||||||||    
T  15115395 taatcgttaatccttgcaaattagccttgcaaagtttaatcatttaaaatttagtccttacacccacttaattactaccacgtcatcaaatta 15115487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 24210602 - 24210642
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatc 80  Q
    |||| |||||||||||  |||||||||||||||||||||||    
T  24210602 gcaaattacccttgcaaagtttaatcatttaaaatttcatc 24210642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 9e-60; HSPs: 80)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 17544419 - 17544247
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||  || ||| ||||||||||||| || || | ||||||||||||||||    
T  17544419 gtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaattttgtcctttgaccaacttaatcactgtcaagtcatcaaattagcaaaa 17544320  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  17544319 tggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 17544247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 40 - 196
Target Start/End: Complemental strand, 20153273 - 20153117
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| ||| |||||||||||||||||| |||||||||||||    
T  20153273 gcaatttacccttgcattgtttaatcatttaaaatttcatcctttgaccaacttaatcactgctacgtcatcaaattagcaaaatgacatgggaatggac 20153174  T
Q  140 aaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||||||||| ||||    
T  20153173 aaaaataccctcgtcatccattcgcgaaatgacatttttacccctatcttcatcttc 20153117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 40 - 196
Target Start/End: Complemental strand, 33871693 - 33871538
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||| ||| |||||||||||||||||| |||||||||||||    
T  33871693 gcaatttacccttgcattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactgctacgtcatcaaattagcaaaatgacatgggaatggac 33871594  T
Q  140 aaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
     |||||||| ||||||||||||| |||||||| |||||||||||| |||||| ||||    
T  33871593 -aaaataccatcgtcatccattcgtgaaatgatatttttacccctgtcttcatcttc 33871538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 33 - 154
Target Start/End: Original strand, 17544111 - 17544233
Alignment:
Q  33 taatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgg 131  Q
    |||||||| |||||||| |||||||||||||||||||||||||||  |||||| ||||||||||||| || || | ||||||||||||||||||||||||    
T  17544111 taatcctgacaatttactcttgcattgtttaatcatttaaaattttgtcatttgaccaacttaatcactgtcaagtcatcaaattagcaaaatggcatgg 17544210  T
Q  132 gaatggacaaaaataccttcgtc 154  Q
    ||||||||||||||||| |||||    
T  17544211 gaatggacaaaaataccctcgtc 17544233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 22298613 - 22298727
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||| | ||| | |||||||||||||||||| ||||||||| |||    
T  22298613 gcaatttacccttacattgtttaatcatttaaaatttcatcctttgaccaacttaatcactaccaagtcatcaaattagcaaaatgacatgggaattgac 22298712  T
Q  140 aaaaataccttcgtc 154  Q
    ||||||||| |||||    
T  22298713 aaaaataccctcgtc 22298727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 33871410 - 33871524
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    |||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||  |||| | ||||||| |||||||||||||||| |||||||    
T  33871410 gcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcaccgccaagtcatcaaactagcaaaatggcatggaaatggac 33871509  T
Q  140 aaaaataccttcgtc 154  Q
    ||||||||| |||||    
T  33871510 aaaaataccctcgtc 33871524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 25 - 138
Target Start/End: Original strand, 8875504 - 8875618
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||| |  ||| ||||||||||||| ||||||| ||||||||||| ||||    
T  8875504 gtaatcgttaatcctggcaatttacacttgcattgtttaatcatttaaaatttcgttctttgaccaacttaatcactgccacgtcatcaaattagtaaaa 8875603  T
Q  124 tggcatgggaatgga 138  Q
    |||||| ||||||||    
T  8875604 tggcataggaatgga 8875618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 21288005 - 21287904
Alignment:
Q  47 acccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaata 146  Q
    ||||||||||||||||||||||||||||||| || ||| |||||||||||||   ||| | |||||||||||||||||||||||||||||||||||||||    
T  21288005 acccttgcattgtttaatcatttaaaatttcttcctttgaccaacttaatcaccaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaata 21287906  T
Q  147 cc 148  Q
    ||    
T  21287905 cc 21287904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 20152836 - 20152965
Alignment:
Q  25 gtaatcgttaatcctgcaa-tttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||||||||| || ||| ||||||||||||| | ||| | |||||||||||| |||    
T  20152836 gtaatcgctaatcctggaaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagc-aaa 20152934  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    ||| ||||||||| ||||||||||| |||||    
T  20152935 tggtatgggaatgaacaaaaataccctcgtc 20152965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 21287814 - 21287905
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgg 131  Q
    |||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||| | ||||| ||| ||||||||||||||||||||    
T  21287814 gcaatttacccttgtattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactaccacgtcattaaattagcaaaatggcatgg 21287905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 49 - 158
Target Start/End: Complemental strand, 11741865 - 11741756
Alignment:
Q  49 ccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||||| ||||||||||||||||||| || ||| ||| | ||||||| || || | |||||||||||||||||||||| ||||||||||||||||||    
T  11741865 ccttgcattctttaatcatttaaaatttcgtcctttgacccagttaatcactgtcaggtcatcaaattagcaaaatggcattggaatggacaaaaatacc 11741766  T
Q  149 ttcgtcatcc 158  Q
     || ||||||    
T  11741765 ctcatcatcc 11741756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 19892681 - 19892599
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||| | || ||||||||| |||||||    
T  19892681 gtaatcgttaatcctaacaatttacccttgcattgtttaatcatttaaaatttcgtcattctccccacttaatcactgccacg 19892599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 86 - 154
Target Start/End: Original strand, 20153035 - 20153103
Alignment:
Q  86 accaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaataccttcgtc 154  Q
    ||||||||||||| | ||| | ||||||||||||||||||||||||||||||||||||||||| |||||    
T  20153035 accaacttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcgtc 20153103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 5255073 - 5255146
Alignment:
Q  25 gtaatcgttaatcctgcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatca 98  Q
    ||||||| ||||||||||| ||| |||||||||  |||||||||||||||||| |||||| |||||||||||||    
T  5255073 gtaatcgctaatcctgcaaattaaccttgcatttattaatcatttaaaatttcgtcatttgaccaacttaatca 5255146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 22870439 - 22870374
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaataccttcgtcatc 157  Q
    ||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||| || |||||    
T  22870439 ttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcatcatc 22870374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 38475372 - 38475319
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38475372 gtaatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 38475319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 22869728 - 22869784
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  22869728 ttaatcactgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaatacc 22869784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 16157227 - 16157176
Alignment:
Q  26 taatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaattt 76  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16157227 taatcgttaatcctgacaatttacccttgcattgtttaatcatttaaaattt 16157176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 20072245 - 20072300
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  20072245 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 20072300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 20072845 - 20072790
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  20072845 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 20072790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 36477352 - 36477297
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  36477352 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 36477297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 39181772 - 39181717
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  39181772 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 39181717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 11761804 - 11761886
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| |||||||||| |||||||||||||||||||||||||| ||  | | || |||||||||||||||||    
T  11761804 gtaatcgctaatcctggcaatttacccctgcattgtttaatcatttaaaatttcgtccatctccccacttaatcattgccacg 11761886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 16083032 - 16083085
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  16083032 gtaatcgataatcctggcaatttacccttgcattgtttaatcatttaaaatttc 16083085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 29646735 - 29646682
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  29646735 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 29646682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 35512203 - 35512256
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  35512203 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 35512256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 39453355 - 39453408
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  39453355 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 39453408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 226
Target Start/End: Original strand, 2467878 - 2467922
Alignment:
Q  182 cctatcttcaacttcatttcactcaattcaatgcctcaaatttat 226  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  2467878 cctatcttcaacttcatttcattcaattcaatgcctcaaatttat 2467922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 18670270 - 18670334
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgcca 104  Q
    |||||||||||||||||||||||||||||||||||||| ||  | | || |||||||||||||||    
T  18670270 gcaatttacccttgcattgtttaatcatttaaaatttcgtccatctccccacttaatcattgcca 18670334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 20840588 - 20840640
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaattt 76  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  20840588 gtaatcgttaatcctagcaatttacccttgcattgtttaatgatttaaaattt 20840640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 24547497 - 24547445
Alignment:
Q  26 taatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  24547497 taatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 24547445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 16533601 - 16533546
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  16533601 taatcactgccacgtcattaaattagcaaaatggcatgggaattgacaaaaatacc 16533546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 36476889 - 36476944
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||  |||||||||||||||||||||||||||| ||||||||||||    
T  36476889 taatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaatacc 36476944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 39181181 - 39181236
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| | ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  39181181 taatcactaccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 39181236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 3529215 - 3529133
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||| |||||||||| | |||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  3529215 gtaatcgttaatcctggcaatttacccctacattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 3529133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 5024391 - 5024338
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| ||||||||| |||||||||||||||||||||||||||    
T  5024391 gtaatcgctaatcctgacaatttaccattgcattgtttaatcatttaaaatttc 5024338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 5993960 - 5993997
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5993960 gcaatttacccttgcattgtttaatcatttaaaatttc 5993997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 11047508 - 11047545
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11047508 gcaatttacccttgcattgtttaatcatttaaaatttc 11047545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 14194780 - 14194743
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14194780 gcaatttacccttgcattgtttaatcatttaaaatttc 14194743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 17202454 - 17202507
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| ||||||||||||||||||||||| |||||||||||||    
T  17202454 gtaatcgctaatcctgacaatttacccttgcattgtttaagcatttaaaatttc 17202507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 20857055 - 20857112
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaa-tggcatgggaatggacaaaaatacc 148  Q
    ||||||| ||||||| |||||||||||||||| |||||||||||| ||||||||||||    
T  20857055 ttaatcactgccacgtcatcaaattagcaaaaatggcatgggaattgacaaaaatacc 20857112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 38442123 - 38442176
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||| ||||||||||||||||||||||||||||    
T  38442123 gtaatcgctaatcctgacaatttactcttgcattgtttaatcatttaaaatttc 38442176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 13362585 - 13362549
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaattt 76  Q
    |||||||||||||||||||||||||||||||||||||    
T  13362585 gcaatttacccttgcattgtttaatcatttaaaattt 13362549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 20814508 - 20814456
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaattt 76  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||||||||||||    
T  20814508 gtaatcgctaatcctagcaatttacacttgcattgtttaatcatttaaaattt 20814456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 22298797 - 22298741
Alignment:
Q  140 aaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| | |||||| ||||    
T  22298797 aaaaataccctcgtcatccattcgtgaaatgacatttttacccgtgtcttcatcttc 22298741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 28269744 - 28269708
Alignment:
Q  41 caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||||||||||||||||||||||||||||    
T  28269744 caatttacccttgcattgtttaatcatttaaaatttc 28269708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 77
Target Start/End: Original strand, 13962937 - 13962972
Alignment:
Q  42 aatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||||||||||||||||||||||||||    
T  13962937 aatttacccttgcattgtttaatcatttaaaatttc 13962972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 16533017 - 16533072
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||  |||||||||||    
T  16533017 taatcactgccacgtcattaaattagcaaaatggcatgggaattcacaaaaatacc 16533072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 182
Target Start/End: Complemental strand, 20153034 - 20152991
Alignment:
Q  139 caaaaataccttcgtcatccattcatgaaatgacatttttaccc 182  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  20153034 caaaaataccctcgtcatccattcacgaaatgacatttttaccc 20152991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 17202736 - 17202690
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||||    
T  17202736 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgccacg 17202690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 18670502 - 18670456
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||||    
T  18670502 ttaatcatttaaaatttcgtcatttaaccaacttaatcactgccacg 18670456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 30005216 - 30005282
Alignment:
Q  33 taatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatca 98  Q
    |||||||| ||||||||  ||||||| |||||||||||||||||| ||| ||| |||||||||||||    
T  30005216 taatcctgacaatttacatttgcattatttaatcatttaaaattttatcttttgaccaacttaatca 30005282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 32242313 - 32242379
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||| |||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  32242313 gcaatttactcttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 32242379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 38475124 - 38475170
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||||    
T  38475124 ttaatcatttaaaatttcgtcatttgaccaacttaatcactgccacg 38475170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 186474 - 186527
Alignment:
Q  25 gtaatcgttaatcctgcaa-tttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||| ||| || |||| |||||||||||||||||||||||||||||    
T  186474 gtaatcgttaattctggaaatttaaccttgcattgtttaatcatttaaaatttc 186527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 8322475 - 8322512
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||| |||||||||||||||||||||||||||||    
T  8322475 gcaatttatccttgcattgtttaatcatttaaaatttc 8322512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 20857524 - 20857467
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaa-tggcatgggaatggacaaaaatacc 148  Q
    ||||||| ||||||  |||||||||||||||| |||||||||||| ||||||||||||    
T  20857524 ttaatcactgccacctcatcaaattagcaaaaatggcatgggaattgacaaaaatacc 20857467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 145
Target Start/End: Complemental strand, 21257450 - 21257413
Alignment:
Q  108 catcaaattagcaaaatggcatgggaatggacaaaaat 145  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  21257450 catcaaattagcaaaatggcatgagaatggacaaaaat 21257413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 27587203 - 27587256
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||| ||||| ||||||||||||||||||||    
T  27587203 gtaatcgctaatcctggcaatttacccctgcatcgtttaatcatttaaaatttc 27587256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 35920557 - 35920504
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| ||||||| |||| ||||||||||||||||||||||||    
T  35920557 gtaatcgctaatcctgacaatttatccttccattgtttaatcatttaaaatttc 35920504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 104
Target Start/End: Original strand, 6150517 - 6150589
Alignment:
Q  33 taatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgcca 104  Q
    |||||||| |||||||  |||||||||||||||||||||||||||| ||  | | || |||||||||||||||    
T  6150517 taatcctgacaatttagtcttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcattgcca 6150589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 24141507 - 24141563
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatc 80  Q
    |||||||||||||||| ||| ||| |||||||  |||||||||||||||||||||||    
T  24141507 gtaatcgttaatcctggcaaattagccttgcaaagtttaatcatttaaaatttcatc 24141563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 186756 - 186710
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| |||||||||||||||| ||||    
T  186756 ttaatcatttaaaatttcgtcctttgaccaacttaatcattgtcacg 186710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 6150757 - 6150711
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  6150757 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 6150711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 11047774 - 11047728
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  11047774 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 11047728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 16156946 - 16156992
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  16156946 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 16156992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 20814226 - 20814272
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  20814226 ttaatcatttaaaatttcgtcctttaaccaacttaatcactgccacg 20814272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 27937144 - 27937182
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatca 98  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  27937144 ttaatcatttaaaatttcgtcatttgaccaacttaatca 27937182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 28269513 - 28269559
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  28269513 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 28269559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 29646453 - 29646499
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||||||||||| ||| ||| ||||||||||||| |||||||    
T  29646453 ttaatcatttaaaattttatcctttgaccaacttaatcactgccacg 29646499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 39453636 - 39453590
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  39453636 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 39453590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 43159151 - 43159105
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  43159151 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 43159105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 14194514 - 14194559
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    |||||||||||||||||| || ||| ||||||||||||| ||||||    
T  14194514 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 14194559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 18247155 - 18247192
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  18247155 gcaatttacccttgcattatttaatcatttagaatttc 18247192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 77
Target Start/End: Complemental strand, 21265494 - 21265461
Alignment:
Q  44 tttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||||||||||| ||||||||||||    
T  21265494 tttacccttgcattgtttaattatttaaaatttc 21265461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 24547281 - 24547326
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    |||||||||||||||||| |||||| ||||| ||||||| ||||||    
T  24547281 ttaatcatttaaaatttcgtcatttgaccaatttaatcactgccac 24547326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 28771195 - 28771158
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||| || |||||||||||||||||||||||    
T  28771195 gcaatttacccctgtattgtttaatcatttaaaatttc 28771158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 35512451 - 35512406
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    |||||||||||||||||| |||||| || |||||||||| ||||||    
T  35512451 ttaatcatttaaaatttcgtcatttgactaacttaatcactgccac 35512406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 5994226 - 5994182
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgcca 104  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||    
T  5994226 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgcca 5994182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 16083280 - 16083236
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgcca 104  Q
    |||||||||||||||||| | |||| ||||||||||||| |||||    
T  16083280 ttaatcatttaaaatttcgttatttgaccaacttaatcactgcca 16083236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 9e-60; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 3469271 - 3469427
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    |||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  3469271 gcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcacggccacgtcatcaaattagcaaaatggcatgggaatggac 3469370  T
Q  140 aaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  3469371 aaaaataccctcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 3469427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 11910754 - 11910926
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| | |||||  |||||||||||||||    
T  11910754 gtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactaccacgttatcaaattagcaaaa 11910853  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  11910854 tggcatgggaatggacaaaaatatcatcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 11910926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 40788791 - 40788619
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| |||||||| |||||||||||||||| ||||||||||| || ||| ||||||||||||| ||||||| ||||||||||||||||    
T  40788791 gtaatcgctaatcctggcaatttactcttgcattgtttaatcttttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaaa 40788692  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||  |||||| ||||    
T  40788691 tggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttaccccagtcttcatcttc 40788619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 25 - 184
Target Start/End: Original strand, 52032193 - 52032353
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| | ||||| |||||||||| |||||    
T  52032193 gtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactaccacgtcatcaaattaacaaaa 52032292  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccct 184  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  52032293 tggcatgggaatggacaaaaataccctcgtcattcattcgtgaaatgacatttttacccct 52032353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 25 - 183
Target Start/End: Complemental strand, 29118909 - 29118750
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| || ||| ||||||||||||| ||||||| ||||| ||||||||||    
T  29118909 gtaatcgctaatcctggcaatttaccattgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcacattagcaaaa 29118810  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccc 183  Q
    |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  29118809 tggcatgggaatagacaaaaataccctcgtcatccattcgtgaaatgacatttttacccc 29118750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 29685996 - 29686168
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||||||||||||| |  ||| |||||||| |||| ||||||| ||||||||||||||||    
T  29685996 gtaatcgctaatcctgacaatttatccttgcattgtttaatcatttaaaatttcgttctttgaccaacttgatcactgccacgtcatcaaattagcaaaa 29686095  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||| |||| |||||| ||||    
T  29686096 tggcatgggaatggagaaaaataccctcgtcatccattcgtgaaatgacatttttatccctgtcttcatcttc 29686168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 40 - 180
Target Start/End: Original strand, 47551564 - 47551704
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||  |||||||||||||||||||||||| |||||||    
T  47551564 gcaatttacccttgcattgtttaatcatttaaaatttcatcctttgaccaacttaatcactgccacatcatcaaattagcaaaatggcatggaaatggac 47551663  T
Q  140 aaaaataccttcgtcatccattcatgaaatgacatttttac 180  Q
    |||| |||| ||||||||||||| |||||||||||||||||    
T  47551664 aaaattaccctcgtcatccattcgtgaaatgacatttttac 47551704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 25 - 202
Target Start/End: Original strand, 32306479 - 32306657
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| ||||| || ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| | ||||| ||||||||||||||||    
T  32306479 gtaatcgctaatcttgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactaccacgtcatcaaattagcaaaa 32306578  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttcatttca 202  Q
    || | |||||||||||||||||| | ||||||||||||| |||||||| ||||||||| || |||||| |||| |||||    
T  32306579 tgacttgggaatggacaaaaatatcctcgtcatccattcgtgaaatgatatttttaccgctgtcttcatcttcttttca 32306657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 37778628 - 37778489
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| ||||||||||||||||||||||| |||| |||    
T  37778628 gcaatttacccttgcattgtttaatcatttaaaatttcatcctttgaccaacttaatcactgccacgtcatcaaattagcaaaatggcatgagaatagac 37778529  T
Q  140 aaaaataccttcgtcatccattcatgaaatgacattttta 179  Q
    ||||||||| | ||||||||||  ||||||||| ||||||    
T  37778528 aaaaatacccttgtcatccatttgtgaaatgactttttta 37778489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 153
Target Start/End: Original strand, 35643906 - 35644035
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| |||||||||| |||||||||||||||||||||||||| || ||| || |||||||||| ||||||| ||||||||||||||||    
T  35643906 gtaatcgctaatcctggcaatttacccgtgcattgtttaatcatttaaaatttcgtcctttgacaaacttaatcactgccacgtcatcaaattagcaaaa 35644005  T
Q  124 tggcatgggaatggacaaaaataccttcgt 153  Q
    ||||||||||||||||||||||||| ||||    
T  35644006 tggcatgggaatggacaaaaataccctcgt 35644035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 25 - 153
Target Start/End: Original strand, 41422027 - 41422156
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||||||||| || |||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||| || |||| ||||||||||||||||    
T  41422027 gtaatcgttaatcttgacaatttacccttacattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactgtcacgtcatcaaattagcaaaa 41422126  T
Q  124 tggcatgggaatggacaaaaataccttcgt 153  Q
    || |||||||||||||||||||||| ||||    
T  41422127 tgacatgggaatggacaaaaataccctcgt 41422156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 32306795 - 32306671
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| | ||| | ||||||||||||||||    
T  32306795 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactaccaagtcatcaaattagcaaaa 32306696  T
Q  124 tggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||||||||||||||    
T  32306695 tggcataggaatggacaaaaatacc 32306671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 3469571 - 3469441
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||| | || ||| ||||||||||||| | ||| | ||||||||||||||||    
T  3469571 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaattccgtcctttgaccaacttaatcactaccaagtcatcaaattagcaaaa 3469472  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    ||||||||||||||||||||||||| |||||    
T  3469471 tggcatgggaatggacaaaaataccctcgtc 3469441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 13948851 - 13948959
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    |||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| || || | ||||||||||||||||||||||||||||||||    
T  13948851 gcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggac 13948950  T
Q  140 aaaaatacc 148  Q
    |||||||||    
T  13948951 aaaaatacc 13948959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 3596431 - 3596313
Alignment:
Q  73 atttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgac 172  Q
    |||| ||||||| ||||||||||||| || |||| |||||||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||||||||    
T  3596431 attttatcatttgaccaacttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctcgtcatgcattcgtgaaatgac 3596332  T
Q  173 atttttacccctatcttca 191  Q
    |||||||||||| ||||||    
T  3596331 atttttacccctgtcttca 3596313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 10307746 - 10307616
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| |  |||| ||| ||||||||||||    
T  10307746 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactcgcacgtcataaaattagcaaaa 10307647  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    | ||||||||||||||||||||||| |||||    
T  10307646 ttgcatgggaatggacaaaaataccctcgtc 10307616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 25 - 146
Target Start/End: Original strand, 43998200 - 43998322
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| | ||| | ||||||||| ||||||    
T  43998200 gtaatcgttaattctggcaatttacccttgcattgtttaatcatttaaaatttcgtcatttgaccaacttaatcactaccaagtcatcaaattcgcaaaa 43998299  T
Q  124 tggcatgggaatggacaaaaata 146  Q
    |||||||||||||| ||||||||    
T  43998300 tggcatgggaatggtcaaaaata 43998322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 154
Target Start/End: Original strand, 3596164 - 3596294
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||| ||||||| ||||||||||||||||||| |  ||| ||||||||||||| | ||| | ||||||||||||||||    
T  3596164 gtaatcgctaatcctgacaatttacctttgcattatttaatcatttaaaatttcgttctttgaccaacttaatcactaccatgtcatcaaattagcaaaa 3596263  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    ||||||| |||||||||||||||||||||||    
T  3596264 tggcatgagaatggacaaaaataccttcgtc 3596294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 10294930 - 10294801
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |  ||| ||||||||||||| ||||| | |||||||||| | |||    
T  10294930 gtaatcgctaatcctcgcaatttacccttgcattgtttaatcatttaaaatttcgttttttgaccaacttaatcactgccaagtcatcaaatta-ccaaa 10294832  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    ||||||||||||||||||||||||| |||||    
T  10294831 tggcatgggaatggacaaaaataccctcgtc 10294801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 52032510 - 52032380
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| |||| |||||||||||||||||||||||||||||||| || ||| |||||||||||||   ||| | ||||||||||||||||    
T  52032510 gtaatcgctaatcctggcaatatacccttgcattgtttaatcatttaaaatttcttcctttgaccaacttaatcaccaccaagtcatcaaattagcaaaa 52032411  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    || |||||||||||||||||||||| |||||    
T  52032410 tgacatgggaatggacaaaaataccctcgtc 52032380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 49 - 154
Target Start/End: Original strand, 29118618 - 29118723
Alignment:
Q  49 ccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||||||||||||||||||||||||| || ||| ||||||||||||| || || | |||||||||||||||||||||||||||||||||||||||||    
T  29118618 ccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaatacc 29118717  T
Q  149 ttcgtc 154  Q
     |||||    
T  29118718 ctcgtc 29118723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 10294639 - 10294787
Alignment:
Q  41 caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggaca 140  Q
    ||||||||||||| ||||||||||||||||||||||| || ||| |||||||||||||      || |||||||||||||||||| ||||| |||| |||    
T  10294639 caatttacccttgtattgtttaatcatttaaaatttcgtcctttaaccaacttaatca------cgtcatcaaattagcaaaatgacatggaaatgtaca 10294732  T
Q  141 aaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    |||||||| || |||| ||||| ||||||||||||||||||||| |||||| ||||    
T  10294733 aaaataccctcatcat-cattcgtgaaatgacatttttacccctgtcttcatcttc 10294787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 29686295 - 29686182
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    |||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||| | ||| | ||| |||||||||||||||||||| |||||||    
T  29686295 gcaatttacccttgcattgtttaatcatttaaaattttgtcatttgaccaacttaatcactaccaagtcat-aaattagcaaaatggcatggaaatggac 29686197  T
Q  140 aaaaataccttcgtc 154  Q
    ||||||||| |||||    
T  29686196 aaaaataccctcgtc 29686182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 148
Target Start/End: Original strand, 40788492 - 40788599
Alignment:
Q  41 caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggaca 140  Q
    ||||||||| ||||||| ||||||||||||||||||| |||||| | ||||||||||| | |||   |||||||||||||||||||||||||||||||||    
T  40788492 caatttacctttgcattatttaatcatttaaaatttcgtcatttgatcaacttaatcactaccaaatcatcaaattagcaaaatggcatgggaatggaca 40788591  T
Q  141 aaaatacc 148  Q
    ||||||||    
T  40788592 aaaatacc 40788599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 9368674 - 9368550
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||| |||||||| |||| |||| ||| |||||||||||||||||||||||| |   || ||| ||||||| ||||||||| |||||||||| |||||    
T  9368674 gtaatcattaatccttgcaaattactcttacattgtttaatcatttaaaatttcgttccttaacccacttaatgattgccacgtcatcaaattaacaaaa 9368575  T
Q  124 tggcatgggaatggacaaaaatacc 148  Q
    ||||||| |||||||||||||||||    
T  9368574 tggcatgagaatggacaaaaatacc 9368550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 47857618 - 47857494
Alignment:
Q  25 gtaatcgttaatcctgc-aatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||| |||  || ||| |||||||  |||||||||||||||||||| |||||| ||||||||||||| ||||||| ||| ||||||||||||    
T  47857618 gtaatcgttaattctggtaaattatccttgcaaagtttaatcatttaaaatttcgtcatttgaccaacttaatcaatgccacgtcataaaattagcaaaa 47857519  T
Q  124 tggcatgggaatggacaaaaatacc 148  Q
    | |||| |||| ||||||| |||||    
T  47857518 tagcataggaaaggacaaatatacc 47857494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 43998432 - 43998344
Alignment:
Q  108 catcaaattagcaaaatggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    |||||||||||||||||| |||| ||||||||||||||| | ||||||| ||||| ||||||||||||||||||| | |||||| ||||    
T  43998432 catcaaattagcaaaatgccatgagaatggacaaaaatatcctcgtcattcattcgtgaaatgacatttttacccatgtcttcatcttc 43998344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 13949047 - 13948979
Alignment:
Q  128 atgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| | |||||| ||||    
T  13949047 atgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttacccttgtcttcatcttc 13948979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 32716372 - 32716428
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32716372 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaatacc 32716428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 47856442 - 47856566
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||| |||| ||||||  |||||||||||||||||||  |||||| ||||||||||||| |  |||| ||| ||||||||||||    
T  47856442 gtaatcgttaatcctgacaaattactcttgcaaagtttaatcatttaaaattttgtcatttgaccaacttaatcaatttcacgtcattaaattagcaaaa 47856541  T
Q  124 tggcatgggaatggacaaaaatacc 148  Q
    | |||| | ||  ||||||||||||    
T  47856542 tagcatagaaaatgacaaaaatacc 47856566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 145
Target Start/End: Original strand, 4322646 - 4322767
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||| ||| ||||||||||||||||||||||||| ||| ||  |  ||| ||||||  | ||||||  |||||||||| |||||    
T  4322646 gtaatcgctaatcctgacaaattaaccttgcattgtttaatcatttaaaaattcgtccctgaacccacttaaagactgccacatcatcaaattaacaaaa 4322745  T
Q  124 tggcatgggaatggacaaaaat 145  Q
    | ||||||||||||||||||||    
T  4322746 tagcatgggaatggacaaaaat 4322767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 2944036 - 2944092
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  2944036 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 2944092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 1756674 - 1756729
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  1756674 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 1756729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 2944642 - 2944587
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  2944642 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 2944587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 37249774 - 37249719
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  37249774 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 37249719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 45278668 - 45278723
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  45278668 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 45278723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 45279260 - 45279205
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  45279260 taatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaatacc 45279205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 48189075 - 48189020
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  48189075 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 48189020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 2796234 - 2796316
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  2796234 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 2796316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 6956304 - 6956438
Alignment:
Q  26 taatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaactt-aatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||||||||||| ||| |||||||||||   || |||||||||||||||| ||  |  ||| |||| ||| | ||||||| ||| |||||| |||||    
T  6956304 taatcgttaatcctggcaaattacccttgcaaacttaaatcatttaaaatttcgtccctacacccactttaattactgccacgtcataaaattaacaaaa 6956403  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatcc 158  Q
    || |||||||||||||||||||||| || ||||||    
T  6956404 tgacatgggaatggacaaaaataccctcatcatcc 6956438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 148
Target Start/End: Complemental strand, 11026607 - 11026553
Alignment:
Q  94 aatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  11026607 aatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 11026553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 23458352 - 23458299
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  23458352 gtaatcgctaatccttgcaatttacccttgcattgtttaatcatttaaaatttc 23458299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 43384338 - 43384391
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  43384338 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttc 43384391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 9294330 - 9294278
Alignment:
Q  26 taatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  9294330 taatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttc 9294278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 148
Target Start/End: Complemental strand, 32717114 - 32717026
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||||||||||||||| ||  | | || | ||||| | ||||||| |||||||||||||||||| ||| ||||||||||||||||||    
T  32717114 ttaatcatttaaaatttcgtccctcttcccaattaattactgccacgtcatcaaattagcaaaatgacataggaatggacaaaaatacc 32717026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 1757280 - 1757225
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| ||||||||||||||||||||||| |||| ||||||||||||    
T  1757280 taatcactgccacgtcatcaaattagcaaaatggcatgagaattgacaaaaatacc 1757225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 37249323 - 37249378
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||| ||| ||||||||||||    
T  37249323 taatcactgccacgtcatcaaattagcaaaatggcatggaaattgacaaaaatacc 37249378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 49 - 148
Target Start/End: Complemental strand, 42855653 - 42855554
Alignment:
Q  49 ccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||||| |||||||||||||||||||||| ||| ||    ||||||| || ||   |||||||||||||||||||| |||||| ||| |||||||||    
T  42855653 ccttgcattctttaatcatttaaaatttcatcctttgactcggttaatcactgtcagatcatcaaattagcaaaatggcttgggaaaggataaaaatacc 42855554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 43105357 - 43105412
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||| | |||||||||||||||||||||||||||| ||||||||||||    
T  43105357 taatcactgccatgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 43105412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 48188502 - 48188557
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  48188502 taatcactgccacgtcatcaaattagcaaaatgccatgggaattgacaaaaatacc 48188557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 1078592 - 1078714
Alignment:
Q  25 gtaatcgttaatcctgcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaat 124  Q
    |||||||||||||  | || ||| ||||| |  |||||||||||||||||||| ||  |  ||| | ||||| |||| || | |||||||||||||| ||    
T  1078592 gtaatcgttaatctggtaaattaaccttgtaaagtttaatcatttaaaatttcgtccctacacccatttaattattgtcatgtcatcaaattagcaagat 1078691  T
Q  125 ggcatgggaatggacaaaaatac 147  Q
    |||| ||||||||||||||||||    
T  1078692 ggcacgggaatggacaaaaatac 1078714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 19741249 - 19741183
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||| ||||||||||||||||||||||| ||| | | || ||||||||| |||||||    
T  19741249 gcaatttacccttgtattgtttaatcatttaaaatttcgtcactctccccacttaatcactgccacg 19741183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 33689752 - 33689670
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  33689752 gtaatcgctaatcctggcaatttacccttgcattatttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 33689670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 4323575 - 4323482
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaatta 117  Q
    ||||||| |||||||| ||| ||| ||||||||||||||||||||||||| ||| ||| |  ||| ||||||| | ||||||| ||||||||||    
T  4323575 gtaatcgctaatcctggcaaattaaccttgcattgtttaatcatttaaaaattcgtcactgaacccacttaatgactgccacgtcatcaaatta 4323482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 157
Target Start/End: Complemental strand, 29192970 - 29192905
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaataccttcgtcatc 157  Q
    ||||||| || |||| |||||||||||||||||| ||||||||| |||||||||||| || |||||    
T  29192970 ttaatcactgtcacgtcatcaaattagcaaaatgacatgggaattgacaaaaataccctcatcatc 29192905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 33156367 - 33156314
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||| || |||||||||||| ||||||||||||||||||||||||    
T  33156367 gtaatcgttaatcttggcaatttaccctttcattgtttaatcatttaaaatttc 33156314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 40506160 - 40506107
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  40506160 gtaatcgttaatcctgacaatttacccttacattatttaatcatttaaaatttc 40506107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 40758202 - 40758252
Alignment:
Q  25 gtaatcgttaatcctgcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| ||||||||||||||||||  |||||||||||||||||||||||||    
T  40758202 gtaatcgctaatcctgcaatttaccc--gcattgtttaatcatttaaaatttc 40758252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 42342862 - 42342899
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||||||||||||||||||||||||||||    
T  42342862 gcaatttacccttgcattgtttaatcatttaaaatttc 42342899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Original strand, 53756799 - 53756852
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||| | | ||||||||||||||||||||||||||||||||||||    
T  53756799 gtaatcgttaatcttagtaatttacccttgcattgtttaatcatttaaaatttc 53756852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 35759090 - 35759050
Alignment:
Q  108 catcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  35759090 catcaaattagcaaaatggcatgagaatggacaaaaatacc 35759050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 40033813 - 40033777
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaattt 76  Q
    |||||||||||||||||||||||||||||||||||||    
T  40033813 gcaatttacccttgcattgtttaatcatttaaaattt 40033777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 43608855 - 43608731
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||||||||||| | || ||| |||||||  |||||||||||||||||||| ||  |  ||| | ||||| | ||| |   |||||||||||||| |    
T  43608855 gtaatcgttaatcctcgtaaattaaccttgcaaagtttaatcatttaaaatttcgtccctacacctatttaattactgctatatcatcaaattagcaaga 43608756  T
Q  124 tggcatgggaatggacaaaaatacc 148  Q
    |||||||| ||||||||||||||||    
T  43608755 tggcatggaaatggacaaaaatacc 43608731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 43105810 - 43105755
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| | ||||| |||||||||||||||||||||| ||||| ||||||||||||    
T  43105810 taatcactaccacgtcatcaaattagcaaaatggcattggaattgacaaaaatacc 43105755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 51994243 - 51994177
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||||| |||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  51994243 gcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 51994177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 33506321 - 33506252
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaactt 93  Q
    ||||||| |||||||| |||||||| ||| |||||||||||||||||||||||  || ||| ||||||||    
T  33506321 gtaatcgctaatcctggcaatttactcttacattgtttaatcatttaaaattttgtcctttgaccaactt 33506252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 41989575 - 41989534
Alignment:
Q  110 tcaaattagcaaaatggcatgggaatggacaaaaataccttc 151  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  41989575 tcaaattagcaaaatggcatgagaatggacaaaaacaccttc 41989534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 55052621 - 55052568
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||| || |||||||||  ||||||||||||||||||||||||||    
T  55052621 gtaatcgttaatcatggcaatttacctctgcattgtttaatcatttaaaatttc 55052568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 11026060 - 11026116
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||| ||||| | ||||||||||||||||| |||||| ||| ||||||||||||    
T  11026060 ttaatcactgccatgtcatcaaattagcaaaatcgcatggaaattgacaaaaatacc 11026116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 26463954 - 26463918
Alignment:
Q  41 caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||| |||||||||||||||||||||||    
T  26463954 caatttacccttgtattgtttaatcatttaaaatttc 26463918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 29192158 - 29192214
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||| ||||||| ||| |||||||||||||| |||| |||| ||||||||||||    
T  29192158 ttaatcactgccacgtcattaaattagcaaaatgacatgagaattgacaaaaatacc 29192214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 46474886 - 46474922
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaattt 76  Q
    |||||||||| ||||||||||||||||||||||||||    
T  46474886 gcaatttaccattgcattgtttaatcatttaaaattt 46474922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 10307559 - 10307602
Alignment:
Q  153 tcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    |||||||||| ||||||||||||||||||||| |||||| ||||    
T  10307559 tcatccattcgtgaaatgacatttttacccctgtcttcatcttc 10307602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 42343078 - 42343023
Alignment:
Q  50 cttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    |||||| || |||||||||||||||||| || ||| ||||||||||||| ||||||    
T  42343078 cttgcaatgattaatcatttaaaatttcgtcctttgaccaacttaatcagtgccac 42343023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 19741014 - 19741060
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||| |||||||||||||||    
T  19741014 ttaatcatttaaaatttcgtcctttgaccaatttaatcattgccacg 19741060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 23458070 - 23458116
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  23458070 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 23458116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 40033597 - 40033635
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatca 98  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  40033597 ttaatcatttaaaatttcgtcatttgaccaacttaatca 40033635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 46475118 - 46475072
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  46475118 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 46475072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 40758447 - 40758402
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    |||||||||||||||||| || ||| ||||||||||||| ||||||    
T  40758447 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 40758402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 141
Target Start/End: Complemental strand, 41558219 - 41558138
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaa 141  Q
    |||||||||||||||||| || ||   || | ||||| | ||||||  |||||||||| |||||||| ||||||||||||||    
T  41558219 ttaatcatttaaaatttcgtccttgagcccagttaattactgccacatcatcaaattatcaaaatggtatgggaatggacaa 41558138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 78
Target Start/End: Original strand, 44960257 - 44960286
Alignment:
Q  49 ccttgcattgtttaatcatttaaaatttca 78  Q
    ||||||||||||||||||||||||||||||    
T  44960257 ccttgcattgtttaatcatttaaaatttca 44960286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 26463723 - 26463767
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgcca 104  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||    
T  26463723 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgcca 26463767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 9e-60; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 25 - 196
Target Start/End: Complemental strand, 8710839 - 8710667
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| |||||||| |||| ||||||| ||||||||||||||||    
T  8710839 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaactttatcactgccacgtcatcaaattagcaaaa 8710740  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||| |||||| ||||    
T  8710739 tggcatgggaatggacaaaaataccctcgtcatcaattcgtgaaatgacatttttacccctgtcttcatcttc 8710667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 25 - 184
Target Start/End: Complemental strand, 15604710 - 15604550
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| |||| || ||||||||||||||||    
T  15604710 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccccgtcatcaaattagcaaaa 15604611  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccct 184  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  15604610 tggcatgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttacccct 15604550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 11830436 - 11830591
Alignment:
Q  41 caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggaca 140  Q
    ||||||||||||||||||||||||||||||||||||| |||||| || |||| ||||| ||||||| |||||||||||||||||||||||||||||||||    
T  11830436 caatttacccttgcattgtttaatcatttaaaatttcgtcatttgacaaactcaatcactgccacgtcatcaaattagcaaaatggcatgggaatggaca 11830535  T
Q  141 aaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    |||||||| |||||||||||||||||||||||||||||| |||| |||||| ||||    
T  11830536 aaaataccctcgtcatccattcatgaaatgacatttttatccctttcttcatcttc 11830591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 41587289 - 41587470
Alignment:
Q  25 gtaatcgttaatcctgcaat-ttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || |||| ||||||||||||||||    
T  41587289 gtaatcgttaatcctggaaaattacccttgcattgtttaatcatttaaaatttcatcctttaaccaacttaatcactgtcacgtcatcaaattagcaaaa 41587388  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttcatttcactc 205  Q
    | ||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||| |||||| |||| | ||||||    
T  41587389 ttgcatgggaatggacaaaaataccgtcatcatccattcatgaaatgatatttttacccctgtcttcatcttcttctcactc 41587470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 15604394 - 15604518
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| | ||||||||||| | ||| | ||| ||||||||||||    
T  15604394 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgatcaacttaatcactaccaagtcatgaaattagcaaaa 15604493  T
Q  124 tggcatgggaatggacaaaaatacc 148  Q
    |||||||||||||||||||||||||    
T  15604494 tggcatgggaatggacaaaaatacc 15604518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 154
Target Start/End: Original strand, 8342258 - 8342372
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    |||||||| ||||||||||||||||||||||||||||| || ||| ||||||||||||| | ||| | |||||||||||||||||||||||||||| |||    
T  8342258 gcaatttatccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactaccaagtcatcaaattagcaaaatggcatgggaattgac 8342357  T
Q  140 aaaaataccttcgtc 154  Q
    ||||||||| |||||    
T  8342358 aaaaataccctcgtc 8342372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 41588413 - 41588299
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||| ||||| | |||||||||||||||||||||||| ||| |||    
T  41588413 gcaatttacacttacattgtttaatcatttaaaatttcatcctttgaccaacttaatcactgccaagtcatcaaattagcaaaatggcatggaaattgac 41588314  T
Q  140 aaaaataccttcgtc 154  Q
    ||||||||| |||||    
T  41588313 aaaaataccctcgtc 41588299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 148
Target Start/End: Complemental strand, 39936620 - 39936496
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||| |||||||||||  |||||||||||||||||||| || ||| ||||| ||||||| ||||||| ||||||||||||||||    
T  39936620 gtaatcgttaatcctggcaaattacccttgcaaagtttaatcatttaaaatttcgtcctttgaccaatttaatcaatgccacgtcatcaaattagcaaaa 39936521  T
Q  124 tggcatgggaatggacaaaaatacc 148  Q
    |||||||| || |||||||||||||    
T  39936520 tggcatggaaaaggacaaaaatacc 39936496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 133
Target Start/End: Complemental strand, 28226115 - 28226006
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |  ||| ||||||||||||| | ||| | ||||||||||||||||    
T  28226115 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtactttgaccaacttaatcactaccaagtcatcaaattagcaaaa 28226016  T
Q  124 tggcatggga 133  Q
    ||||||||||    
T  28226015 tggcatggga 28226006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 6588763 - 6588862
Alignment:
Q  49 ccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||||| ||||||||||||||||||| || ||| ||| | || |||| ||||| | |||||||||||||||||||||||||||||||||||||||||    
T  6588763 ccttgcattctttaatcatttaaaatttcgtcctttgacccagttgatcactgccaggtcatcaaattagcaaaatggcatgggaatggacaaaaatacc 6588862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 33 - 190
Target Start/End: Complemental strand, 8342542 - 8342392
Alignment:
Q  33 taatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgg 131  Q
    |||||||| |||||||||||||||||||||||| |||||||||||| || ||| | ||||||||||| |||| || ||||||||        ||||||||    
T  8342542 taatcctgacaatttacccttgcattgtttaattatttaaaatttcgtcctttgaacaacttaatcactgccgcgtcatcaaat--------tggcatgg 8342451  T
Q  132 gaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttc 190  Q
    ||||||||||||||| | | |||||| |||  | ||||||||||||||||||| |||||    
T  8342450 gaatggacaaaaataaccttgtcatctatttgtaaaatgacatttttacccctgtcttc 8342392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 25 - 158
Target Start/End: Complemental strand, 202729 - 202595
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||| ||| |||||||  |||||||||||||||||||| ||  |  ||| ||||||| | | |||||  |||||||||||||||    
T  202729 gtaatcgttaatcctggcaaattagccttgcagagtttaatcatttaaaatttcgtccctacacccacttaattactcccacgttatcaaattagcaaaa 202630  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatcc 158  Q
    ||||||| |||| ||||||||||||||| ||||||    
T  202629 tggcatgagaatagacaaaaataccttcatcatcc 202595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 25623379 - 25623467
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||||||||||||||| ||  | ||||   ||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  25623379 ttaatcatttaaaatttcgtccctctacccggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaatacc 25623467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 29957940 - 29957996
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  29957940 ttaatcattgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 29957996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 60 - 158
Target Start/End: Complemental strand, 25624442 - 25624344
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaataccttcgtcatcc 158  Q
    |||||||||||||||||| ||  | ||||   ||||||| ||||||  |||||||||| |||||||||||||||||||||||||||||| || ||||||    
T  25624442 ttaatcatttaaaatttcgtccctctacccggttaatcactgccacatcatcaaattaacaaaatggcatgggaatggacaaaaataccctcatcatcc 25624344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 36382217 - 36382298
Alignment:
Q  26 taatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||  | | || ||||||||| |||||||    
T  36382217 taatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcatccctctccccacttaatcactgccacg 36382298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 29958524 - 29958468
Alignment:
Q  92 ttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  29958524 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 29958468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 10712779 - 10712834
Alignment:
Q  26 taatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatc 80  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10712779 taatcattaatcctggcaatttacccttgcattgtttaatcatttaaaatttcatc 10712834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 20983237 - 20983182
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  20983237 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 20983182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 21103205 - 21103260
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  21103205 taatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaatacc 21103260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 22051366 - 22051313
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  22051366 gtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttc 22051313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 8710607 - 8710647
Alignment:
Q  108 catcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8710607 catcaaattagcaaaatggcatgggaatggacaaaaatacc 8710647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 3555330 - 3555429
Alignment:
Q  49 ccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||||||| ||||||||||||||||||| || ||| ||| | ||||||| |||||   |||||||||| |||||||||||| ||| | ||| |||||||    
T  3555330 ccttgcattctttaatcatttaaaatttcgtcctttaacccagttaatcactgccagatcatcaaattaacaaaatggcatgagaaagaacataaatacc 3555429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 20982648 - 20982703
Alignment:
Q  93 taatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||| ||||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  20982648 taatcactgccacgtcatcaaattagcaaaatggtatgggaattgacaaaaatacc 20982703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 15848143 - 15848225
Alignment:
Q  25 gtaatcgttaatcctgc-aatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  15848143 gtaatcgctaatcctggtaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 15848225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 37895720 - 37895638
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  37895720 gtaatcgctaatcctggcaatttacacttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 37895638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 39498365 - 39498447
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||| |||||||||| | |||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  39498365 gtaatcgttaatcctggcaatttacccctacattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 39498447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 2318229 - 2318266
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2318229 gcaatttacccttgcattgtttaatcatttaaaatttc 2318266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 44714118 - 44714081
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44714118 gcaatttacccttgcattgtttaatcatttaaaatttc 44714081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 6657949 - 6658015
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||||| |||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  6657949 gcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 6658015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 16099126 - 16099192
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||||| |||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  16099126 gcaatttacccctgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 16099192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 106
Target Start/End: Original strand, 37895438 - 37895484
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||||    
T  37895438 ttaatcatttaaaatttcatcctttgaccaacttaatcactgccacg 37895484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 6573598 - 6573647
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaa 73  Q
    ||||||| |||||||| ||||||||||||| |||||||||||||||||||    
T  6573598 gtaatcgctaatcctggcaatttacccttgaattgtttaatcatttaaaa 6573647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 9076404 - 9076359
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||    
T  9076404 ttaatcatttaaaatttcgtcatttaaccaacttaatcactgccac 9076359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 11163396 - 11163343
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||| |||||||| |||||||||  ||||||||||||||||||||||||||    
T  11163396 gtaatcgctaatcctggcaatttacctctgcattgtttaatcatttaaaatttc 11163343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 77
Target Start/End: Original strand, 36479793 - 36479826
Alignment:
Q  44 tttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||||||||||||||||||||||||    
T  36479793 tttacccttgcattgtttaatcatttaaaatttc 36479826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 39935511 - 39935576
Alignment:
Q  26 taatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaa 90  Q
    ||||||||||||||| ||| ||| |||||||  ||||||||||||||||||||||| ||| |||||    
T  39935511 taatcgttaatcctgacaaattatccttgcaaagtttaatcatttaaaatttcatcttttgaccaa 39935576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 3653452 - 3653400
Alignment:
Q  25 gtaatcgttaatcctgcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||||  |||| |||||||||||  ||||||||||||||||||||    
T  3653452 gtaatcgttaatctggcaaattacccttgcaaagtttaatcatttaaaatttc 3653400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 25893574 - 25893542
Alignment:
Q  41 caatttacccttgcattgtttaatcatttaaaa 73  Q
    |||||||||||||||||||||||||||||||||    
T  25893574 caatttacccttgcattgtttaatcatttaaaa 25893542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 36755165 - 36755201
Alignment:
Q  41 caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||| ||||||||||||||||||||||||    
T  36755165 caatttacccttacattgtttaatcatttaaaatttc 36755201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 45556167 - 45556219
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaattt 76  Q
    ||||||| |||||||| ||||||| || |||||||||||||||||||||||||    
T  45556167 gtaatcgctaatcctggcaatttatccctgcattgtttaatcatttaaaattt 45556219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 148
Target Start/End: Original strand, 199088 - 199187
Alignment:
Q  49 ccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||||  |||||||||||||||||||  ||  || ||| ||||||| | || |||  |||||||||| |||||  ||||| |||||||||||||||||    
T  199088 ccttgcaaagtttaatcatttaaaattttgtcccttaacccacttaatgactgtcacatcatcaaattaacaaaagagcatgcgaatggacaaaaatacc 199187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 15848425 - 15848379
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  15848425 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 15848379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 34448132 - 34448086
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  34448132 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacg 34448086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 39498616 - 39498570
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||||||||||||| ||| ||| ||||||||||||| |||||||    
T  39498616 ttaatcatttaaaatttaatcctttgaccaacttaatcactgccacg 39498570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 3556382 - 3556329
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||||| ||||  || ||||||||| |||||||||||||||||||    
T  3556382 gtaatcgttaatccttgcaaactagccttgcattctttaatcatttaaaatttc 3556329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 6589732 - 6589679
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||||||| ||| ||| |||||||||||  ||||||||||||||||||||    
T  6589732 gtaatcgttaattctggcaaattacccttgcaaagtttaatcatttaaaatttc 6589679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 25892449 - 25892498
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaa 73  Q
    ||||||| |||||||| ||| |||||||| ||||||||||||||||||||    
T  25892449 gtaatcgctaatcctggcaaattacccttccattgtttaatcatttaaaa 25892498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 28230112 - 28230059
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    ||||||||||||||| |||| |||||||| ||  ||||||||||||||||||||    
T  28230112 gtaatcgttaatcctagcaaattaccctttcaaagtttaatcatttaaaatttc 28230059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 77
Target Start/End: Original strand, 39423586 - 39423623
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttc 77  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  39423586 gcaatttatccttgtattgtttaatcatttaaaatttc 39423623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 44713886 - 44713931
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    |||||||||||||||||| || ||| ||||||||||||| ||||||    
T  44713886 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 44713931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 25230241 - 25230281
Alignment:
Q  108 catcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    ||||| ||| ||||||||||||| |||||||||||||||||    
T  25230241 catcagattggcaaaatggcatgcgaatggacaaaaatacc 25230281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 45556384 - 45556340
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgcca 104  Q
    ||||||||||||||||| ||| ||| ||||||||||||| |||||    
T  45556384 ttaatcatttaaaatttaatcctttgaccaacttaatcactgcca 45556340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 2448 - 2620
Alignment:
Q  25 gtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| | |||||  |||||||||||||||    
T  2448 gtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactaccacgttatcaaattagcaaaa 2547  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  2548 tggcatgggaatggacaaaaataacatcgtcatccattcgtgaaatgacatttttacccctgtcttcatcttc 2620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 25 - 191
Target Start/End: Complemental strand, 12610 - 12443
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |  ||| ||| ||||||||| ||||||| ||||||||||||||||    
T  12610 gtaatcgttaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgttctttgacctacttaatcactgccacgtcatcaaattagcaaaa 12511  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttca 191  Q
    || ||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| | ||||||    
T  12510 tgacatgggaatagacaaaaataccatcgtcatccattcttgaaatgacatttttacccatgtcttca 12443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 146
Target Start/End: Original strand, 12294 - 12416
Alignment:
Q  24 agtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaa 122  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| || |||| ||||| | ||| | |||||||||||||||    
T  12294 agtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtc-tttgacaaactaaatcactcccaagtcatcaaattagcaaa 12392  T
Q  123 atggcatgggaatggacaaaaata 146  Q
    ||| ||||| ||||||||||||||    
T  12393 atgacatggaaatggacaaaaata 12416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 24 - 196
Target Start/End: Complemental strand, 12152 - 11979
Alignment:
Q  24 agtaatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaa 122  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| ||||||| |||||||||||||||    
T  12152 agtaatcgctaatcctagcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccacgtcatcaaattagcaaa 12053  T
Q  123 atggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    |||||||| ||||||||||||||| | |||||||||||||  ||||||  |||||||||||| |||||| ||||    
T  12052 atggcatgagaatggacaaaaatatcatcgtcatccattcgggaaatgcaatttttacccctgtcttcatcttc 11979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 221845 - 222016
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| || |||||||||| ||||||| ||||||||||||||||    
T  221845 gtaatcgctaatcctggcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgac-aacttaatcactgccacgtcatcaaattagcaaaa 221943  T
Q  124 tggcatgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||| ||||||||||| || |||||||||| |||||||||||||||| |||| |||||| ||||    
T  221944 tggcatgggaatgaacaaaaataccctcatcatccattcttgaaatgacatttttatccctgtcttcatcttc 222016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 25 - 154
Target Start/End: Complemental strand, 222160 - 222030
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaa 123  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| ||||| | |||||||||| |||||    
T  222160 gtaatcgctaatcctgacaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgccaagtcatcaaattaacaaaa 222061  T
Q  124 tggcatgggaatggacaaaaataccttcgtc 154  Q
    ||||||||||||||||||||||||| |||||    
T  222060 tggcatgggaatggacaaaaataccctcgtc 222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 991 - 1099
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggac 139  Q
    |||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| || || | ||||||||||||||||||||||||||||||||    
T  991 gcaatttacccttgcattgtttaatcatttaaaatttcgtcctttgaccaacttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggac 1090  T
Q  140 aaaaatacc 148  Q
    |||||||||    
T  1091 aaaaatacc 1099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 1187 - 1119
Alignment:
Q  128 atgggaatggacaaaaataccttcgtcatccattcatgaaatgacatttttacccctatcttcaacttc 196  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| | |||||| ||||    
T  1187 atgggaatggacaaaaataccctcgtcatccattcgtgaaatgacatttttacccttgtcttcatcttc 1119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 148
Target Start/End: Complemental strand, 6350 - 6227
Alignment:
Q  26 taatcgttaatcct-gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaat 124  Q
    |||||| ||||||| |||| ||||||||||| ||||||||||||||||||||| |   || ||| ||||||| | ||||||| ||||||||||||||| |    
T  6350 taatcgataatccttgcaaattacccttgcaatgtttaatcatttaaaatttcgttccttaacccacttaatgactgccacgtcatcaaattagcaaagt 6251  T
Q  125 ggcatgggaatggacaaaaatacc 148  Q
    ||||| |||| |||||||||||||    
T  6250 ggcataggaaaggacaaaaatacc 6227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 60 - 148
Target Start/End: Original strand, 5053 - 5141
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatggacaaaaatacc 148  Q
    |||||||||||||||||| || ||| ||| | ||||||  ||||||| |||||||||||||||||| ||||| || |||||||||||||    
T  5053 ttaatcatttaaaatttcgtcctttgacctaattaatcgctgccacgtcatcaaattagcaaaatgacatggaaaaggacaaaaatacc 5141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 19927 - 20035
Alignment:
Q  39 tgcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacgacatcaaattagcaaaatggcatgggaatgga 138  Q
    ||||| ||||| ||||||| ||||||||||||||||||| |   || ||| | ||||| | || |||| |||||||||||||||||||||||||||||||    
T  19927 tgcaaattacctttgcattctttaatcatttaaaatttcgttcattaacctaattaatgactgtcacgtcatcaaattagcaaaatggcatgggaatgga 20026  T
Q  139 caaaaatac 147  Q
    |||||||||    
T  20027 caaaaatac 20035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 69036 - 69102
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  69036 gcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 69102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 69302 - 69256
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||| || ||| ||||||||||||| |||||||    
T  69302 ttaatcatttaaaatttcgtcctttaaccaacttaatcactgccacg 69256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 1840 - 1906
Alignment:
Q  40 gcaatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    |||||||||||||||||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  1840 gcaatttacccttgcattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 1906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 37936 - 37854
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| ||||||||||||| ||||||||||||||||||||||| ||  | | || ||||||||| |||||||    
T  37936 gtaatcgctaatcctgacaatttacccttgtattgtttaatcatttaaaatttcgtccctctccccacttaatcactgccacg 37854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 37655 - 37700
Alignment:
Q  60 ttaatcatttaaaatttcatcattttaccaacttaatcattgccac 105  Q
    |||||||||||||||||| || ||| ||||||||||||| ||||||    
T  37655 ttaatcatttaaaatttcgtcctttgaccaacttaatcactgccac 37700  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 139727 - 139809
Alignment:
Q  25 gtaatcgttaatcctg-caatttacccttgcattgtttaatcatttaaaatttcatcattttaccaacttaatcattgccacg 106  Q
    ||||||| |||||||| |||||||||| || |||| |||||||||||||||||| ||  | | || ||||||||| |||||||    
T  139727 gtaatcgctaatcctggcaatttacccatgaattgattaatcatttaaaatttcgtccctctccccacttaatcactgccacg 139809  T

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