View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17678_low_8 (Length: 358)

Name: NF17678_low_8
Description: NF17678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17678_low_8
NF17678_low_8
[»] chr5 (26 HSPs)
chr5 (10-341)||(42364785-42365112)
chr5 (10-107)||(31690702-31690799)
chr5 (10-107)||(8146095-8146192)
chr5 (10-107)||(8541646-8541743)
chr5 (10-107)||(12638869-12638966)
chr5 (10-107)||(17825280-17825377)
chr5 (10-107)||(20914839-20914936)
chr5 (10-107)||(37066305-37066402)
chr5 (10-107)||(13146709-13146806)
chr5 (10-107)||(16286165-16286262)
chr5 (10-107)||(30086630-30086727)
chr5 (10-107)||(31316883-31316980)
chr5 (10-107)||(24432482-24432579)
chr5 (10-107)||(35462800-35462897)
chr5 (10-107)||(25962530-25962631)
chr5 (12-107)||(2002217-2002312)
chr5 (12-107)||(8143914-8144009)
chr5 (12-102)||(24439558-24439647)
chr5 (36-102)||(28907055-28907122)
chr5 (36-102)||(28943450-28943517)
chr5 (49-99)||(20452543-20452593)
chr5 (30-83)||(3463917-3463970)
chr5 (31-84)||(42273654-42273705)
chr5 (29-82)||(445990-446043)
chr5 (47-84)||(15006413-15006450)
chr5 (31-107)||(8146705-8146781)
[»] chr2 (36 HSPs)
chr2 (10-107)||(5091621-5091718)
chr2 (10-206)||(792437-792633)
chr2 (10-107)||(4033756-4033853)
chr2 (10-107)||(8784373-8784470)
chr2 (10-107)||(14565454-14565551)
chr2 (10-107)||(21539735-21539832)
chr2 (10-107)||(10478156-10478253)
chr2 (10-107)||(29514100-29514197)
chr2 (10-107)||(33635314-33635411)
chr2 (10-107)||(43075728-43075825)
chr2 (10-107)||(43451483-43451580)
chr2 (10-102)||(44803881-44803973)
chr2 (10-107)||(4091989-4092086)
chr2 (22-107)||(28424252-28424337)
chr2 (10-107)||(28492498-28492595)
chr2 (10-107)||(29514556-29514653)
chr2 (10-107)||(35832390-35832487)
chr2 (10-107)||(38549724-38549821)
chr2 (12-102)||(15068718-15068808)
chr2 (12-102)||(18833993-18834082)
chr2 (12-102)||(9294638-9294728)
chr2 (37-107)||(22162298-22162368)
chr2 (13-102)||(13822854-13822943)
chr2 (10-57)||(10979197-10979244)
chr2 (59-107)||(15858740-15858788)
chr2 (41-102)||(12872107-12872168)
chr2 (30-102)||(26998304-26998376)
chr2 (30-102)||(32010089-32010161)
chr2 (30-97)||(20380115-20380182)
chr2 (62-107)||(38071571-38071616)
chr2 (50-102)||(8032790-8032842)
chr2 (30-76)||(9709526-9709572)
chr2 (30-83)||(32273677-32273730)
chr2 (10-47)||(38071531-38071568)
chr2 (30-83)||(44442137-44442190)
chr2 (31-83)||(11031025-11031077)
[»] chr8 (43 HSPs)
chr8 (10-207)||(44411292-44411490)
chr8 (10-107)||(3099934-3100031)
chr8 (10-107)||(24612563-24612660)
chr8 (10-107)||(27621111-27621208)
chr8 (10-107)||(44052602-44052699)
chr8 (10-105)||(34713511-34713606)
chr8 (10-107)||(31133112-31133209)
chr8 (10-107)||(35260038-35260135)
chr8 (10-107)||(37598051-37598148)
chr8 (10-107)||(11992709-11992806)
chr8 (10-107)||(27752567-27752664)
chr8 (10-107)||(39187214-39187311)
chr8 (10-107)||(44358574-44358671)
chr8 (10-104)||(37567514-37567608)
chr8 (10-107)||(32678592-32678689)
chr8 (10-107)||(35346387-35346484)
chr8 (10-107)||(35344347-35344445)
chr8 (10-107)||(11044038-11044135)
chr8 (10-107)||(36538039-36538136)
chr8 (17-107)||(12108151-12108240)
chr8 (10-107)||(25321669-25321766)
chr8 (10-107)||(33851106-33851203)
chr8 (19-102)||(41426325-41426408)
chr8 (19-107)||(2238685-2238773)
chr8 (14-102)||(16643369-16643457)
chr8 (19-107)||(24510787-24510875)
chr8 (31-102)||(27819644-27819715)
chr8 (56-107)||(40487794-40487845)
chr8 (30-102)||(41791563-41791635)
chr8 (30-97)||(25195149-25195216)
chr8 (30-83)||(17314834-17314887)
chr8 (30-83)||(17336746-17336799)
chr8 (33-102)||(34899910-34899979)
chr8 (30-102)||(8673366-8673438)
chr8 (43-102)||(16635429-16635488)
chr8 (43-102)||(16635697-16635756)
chr8 (30-83)||(4038984-4039037)
chr8 (30-83)||(29147340-29147393)
chr8 (31-84)||(36190775-36190828)
chr8 (10-63)||(40486575-40486628)
chr8 (10-102)||(2628247-2628339)
chr8 (31-83)||(14576249-14576301)
chr8 (30-102)||(41362410-41362482)
[»] chr7 (42 HSPs)
chr7 (10-206)||(43107945-43108142)
chr7 (10-107)||(23106430-23106527)
chr7 (10-107)||(35181169-35181266)
chr7 (10-107)||(45598881-45598978)
chr7 (10-107)||(48879365-48879462)
chr7 (10-107)||(22111370-22111467)
chr7 (10-107)||(40583122-40583219)
chr7 (10-107)||(3157413-3157510)
chr7 (10-107)||(34808196-34808293)
chr7 (10-107)||(41889148-41889245)
chr7 (10-107)||(47383383-47383480)
chr7 (10-107)||(18206359-18206456)
chr7 (10-107)||(19933095-19933192)
chr7 (10-107)||(19964234-19964331)
chr7 (10-107)||(21654161-21654258)
chr7 (10-107)||(40560359-40560456)
chr7 (10-107)||(42617648-42617745)
chr7 (10-107)||(48937929-48938026)
chr7 (10-107)||(48942955-48943052)
chr7 (10-107)||(23731537-23731634)
chr7 (10-107)||(36576395-36576492)
chr7 (10-107)||(41815733-41815830)
chr7 (10-107)||(41890282-41890379)
chr7 (10-107)||(32491147-32491244)
chr7 (10-94)||(7989348-7989432)
chr7 (10-207)||(44600323-44600520)
chr7 (12-107)||(33153016-33153111)
chr7 (12-107)||(30082330-30082425)
chr7 (12-102)||(35084143-35084233)
chr7 (10-137)||(9818427-9818542)
chr7 (10-137)||(10720352-10720467)
chr7 (30-102)||(39337512-39337584)
chr7 (30-97)||(39348776-39348843)
chr7 (12-94)||(28608363-28608445)
chr7 (19-107)||(29236117-29236204)
chr7 (30-102)||(18800834-18800906)
chr7 (30-97)||(31769063-31769130)
chr7 (30-102)||(35888070-35888142)
chr7 (30-97)||(48339322-48339389)
chr7 (50-102)||(6882387-6882439)
chr7 (31-84)||(25944581-25944634)
chr7 (10-83)||(38260322-38260395)
[»] chr4 (37 HSPs)
chr4 (10-206)||(30776532-30776728)
chr4 (10-206)||(30777363-30777559)
chr4 (10-107)||(53677527-53677624)
chr4 (10-107)||(1620004-1620101)
chr4 (10-107)||(3043215-3043312)
chr4 (10-107)||(32012375-32012472)
chr4 (10-103)||(39970037-39970130)
chr4 (10-107)||(43980473-43980570)
chr4 (10-107)||(49902002-49902099)
chr4 (10-107)||(10591551-10591648)
chr4 (10-107)||(29180460-29180557)
chr4 (10-107)||(47807170-47807267)
chr4 (13-106)||(51495125-51495218)
chr4 (10-107)||(37788426-37788523)
chr4 (10-107)||(38187774-38187871)
chr4 (10-107)||(50768420-50768517)
chr4 (10-107)||(52713038-52713135)
chr4 (10-107)||(9798123-9798220)
chr4 (10-107)||(55937751-55937848)
chr4 (10-107)||(29899690-29899787)
chr4 (10-107)||(38940844-38940941)
chr4 (23-107)||(27750409-27750493)
chr4 (12-102)||(30012004-30012091)
chr4 (19-84)||(5234059-5234124)
chr4 (39-102)||(5222370-5222433)
chr4 (33-94)||(7652121-7652182)
chr4 (31-100)||(17799230-17799299)
chr4 (17-102)||(40553754-40553839)
chr4 (30-102)||(23978210-23978282)
chr4 (30-97)||(5064750-5064817)
chr4 (30-97)||(37911874-37911941)
chr4 (29-83)||(32410332-32410386)
chr4 (36-97)||(40411091-40411152)
chr4 (38-94)||(49080250-49080306)
chr4 (53-84)||(17236342-17236373)
chr4 (55-102)||(53848452-53848499)
chr4 (31-83)||(8178335-8178387)
[»] chr3 (49 HSPs)
chr3 (10-107)||(26641156-26641253)
chr3 (10-107)||(49068030-49068127)
chr3 (10-107)||(53020162-53020259)
chr3 (10-107)||(23513546-23513643)
chr3 (10-107)||(55400717-55400814)
chr3 (10-207)||(21654123-21654321)
chr3 (13-107)||(52172057-52172151)
chr3 (10-107)||(1335089-1335186)
chr3 (10-107)||(31126191-31126288)
chr3 (10-107)||(37324128-37324225)
chr3 (10-107)||(46580515-46580612)
chr3 (10-107)||(46296121-46296218)
chr3 (10-107)||(32322283-32322380)
chr3 (10-107)||(51255165-51255262)
chr3 (10-107)||(51426598-51426695)
chr3 (10-107)||(28793140-28793238)
chr3 (10-107)||(43575936-43576033)
chr3 (10-107)||(45781376-45781473)
chr3 (10-107)||(52252015-52252112)
chr3 (20-105)||(13541258-13541343)
chr3 (10-107)||(16739204-16739296)
chr3 (32-106)||(46820029-46820103)
chr3 (12-102)||(36189052-36189142)
chr3 (10-68)||(45347757-45347815)
chr3 (12-84)||(51309415-51309487)
chr3 (10-60)||(34022625-34022675)
chr3 (12-83)||(46303547-46303618)
chr3 (30-83)||(21214245-21214298)
chr3 (30-83)||(25242239-25242292)
chr3 (30-102)||(2994479-2994551)
chr3 (30-102)||(22456069-22456141)
chr3 (30-102)||(22479115-22479187)
chr3 (31-102)||(54725665-54725736)
chr3 (12-102)||(7886660-7886750)
chr3 (31-84)||(50651099-50651152)
chr3 (30-102)||(47444034-47444106)
chr3 (31-102)||(30454786-30454857)
chr3 (56-102)||(7615008-7615054)
chr3 (30-84)||(20847329-20847383)
chr3 (36-102)||(23209347-23209413)
chr3 (10-83)||(8097059-8097132)
chr3 (31-84)||(35963161-35963214)
chr3 (49-102)||(49068546-49068599)
chr3 (31-84)||(50730118-50730171)
chr3 (31-84)||(50782683-50782736)
chr3 (50-82)||(3972286-3972318)
chr3 (50-82)||(3997560-3997592)
chr3 (30-102)||(17587699-17587771)
chr3 (145-206)||(55400618-55400679)
[»] chr1 (44 HSPs)
chr1 (10-107)||(44875157-44875254)
chr1 (10-206)||(46949200-46949396)
chr1 (10-107)||(25990726-25990823)
chr1 (10-107)||(40960559-40960656)
chr1 (10-107)||(15285782-15285878)
chr1 (10-107)||(28017636-28017733)
chr1 (10-107)||(31970394-31970491)
chr1 (10-107)||(40220035-40220131)
chr1 (10-107)||(40935698-40935795)
chr1 (10-107)||(43656122-43656219)
chr1 (10-107)||(9128021-9128118)
chr1 (10-107)||(18036522-18036619)
chr1 (10-107)||(18852201-18852298)
chr1 (10-107)||(23873912-23874009)
chr1 (10-107)||(28916600-28916697)
chr1 (10-107)||(35941819-35941916)
chr1 (10-107)||(38942526-38942623)
chr1 (10-107)||(47996932-47997029)
chr1 (20-107)||(26907184-26907271)
chr1 (12-107)||(29488726-29488821)
chr1 (10-105)||(6848391-6848486)
chr1 (10-107)||(15311156-15311252)
chr1 (10-107)||(26479717-26479814)
chr1 (10-107)||(35189179-35189276)
chr1 (10-107)||(45357961-45358058)
chr1 (10-107)||(49924397-49924494)
chr1 (10-107)||(4529165-4529262)
chr1 (10-107)||(39026331-39026428)
chr1 (10-107)||(18913430-18913528)
chr1 (10-84)||(35884212-35884286)
chr1 (12-102)||(36383912-36384001)
chr1 (12-98)||(44056385-44056471)
chr1 (30-102)||(25185406-25185478)
chr1 (10-102)||(41063728-41063820)
chr1 (36-102)||(16661502-16661569)
chr1 (36-102)||(15912185-15912251)
chr1 (30-83)||(13351686-13351739)
chr1 (30-83)||(44510321-44510374)
chr1 (31-102)||(5858474-5858545)
chr1 (30-102)||(7397693-7397765)
chr1 (30-94)||(45840167-45840231)
chr1 (31-102)||(42724082-42724152)
chr1 (50-102)||(34102095-34102146)
chr1 (30-82)||(37735485-37735537)
[»] chr6 (17 HSPs)
chr6 (10-205)||(12278586-12278781)
chr6 (10-107)||(10227890-10227987)
chr6 (10-107)||(33756234-33756331)
chr6 (10-107)||(17598271-17598368)
chr6 (10-107)||(17721891-17721988)
chr6 (10-107)||(30949113-30949210)
chr6 (10-107)||(374077-374174)
chr6 (10-107)||(30766424-30766521)
chr6 (10-107)||(31887203-31887300)
chr6 (30-102)||(3888412-3888484)
chr6 (41-99)||(32882806-32882864)
chr6 (33-102)||(21963941-21964009)
chr6 (30-102)||(4987928-4988000)
chr6 (37-102)||(16655180-16655245)
chr6 (30-83)||(4031991-4032044)
chr6 (30-83)||(16524384-16524436)
chr6 (31-83)||(5300696-5300748)
[»] scaffold0495 (1 HSPs)
scaffold0495 (10-107)||(4609-4705)
[»] scaffold0330 (1 HSPs)
scaffold0330 (30-102)||(3155-3227)
[»] scaffold0565 (1 HSPs)
scaffold0565 (30-98)||(5977-6045)


Alignment Details
Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 10 - 341
Target Start/End: Complemental strand, 42365112 - 42364785
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgnn 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||      
T  42365112 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 42365013  T
Q  110 nnnnncaataataacataaaagttggtcnnnnnnngcttatattttgaaacaaataatatgaaannnnnnngcttatattttaggatggagggagtacca 209  Q
          || |||||||||||||||||||       ||||||||||||| ||||| ||||||| |       ||||||||||||||| |||||||||||||    
T  42365012 aaa---aacaataacataaaagttggtctttttt-gcttatattttgagacaaagaatatgagattcttttgcttatattttaggacggagggagtacca 42364917  T
Q  210 aataacccagtttcaattgagttttatcacttcatccttcaaggcacaagacatcacttgcatgcacacataccaagtaaggggattagcaatgtcctga 309  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  42364916 aataacacagtttcaattgagttttatcacttcatccttcaaagcacaagacatcacttgcatgcacacataccaagtaaggggattagcaatgtactga 42364817  T
Q  310 atgagctacataggttcaagtctcattatcct 341  Q
    || |||||||||||||||||||||||| ||||    
T  42364816 ataagctacataggttcaagtctcattctcct 42364785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 31690702 - 31690799
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31690702 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 31690799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 8146095 - 8146192
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8146095 ataattctcattagttaaaaattatggagaaaataaaaaagagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 8146192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 8541646 - 8541743
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  8541646 ataattctcattggttaaaaattatggagaaaataaaatggagaacaaatttaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 8541743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 12638966 - 12638869
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  12638966 ataattctcattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgcaatttgcatttaattttacattgaaaaaaataatttgtttg 12638869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 17825280 - 17825377
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  17825280 ataattctcattggttaaaaattatggagaaaataaaaaggaggacaaattgaatgtaatttgcatttaattttacattgaaaaatatgatttgtttg 17825377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 20914936 - 20914839
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  20914936 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 20914839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 37066305 - 37066402
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  37066305 ataattctcattggttaaaaattatggagaaaataaaaaggacaacaaattgaatgcaatttgcatttaattttacattggaaaagattatttgtttg 37066402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 13146806 - 13146709
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  13146806 ataattctcattggttaaaaattatggagaaaacaaaaatgagaacaaattgaatgcaatttacatttaattttacattggaaaagatgatttgtttg 13146709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 16286165 - 16286262
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||||||    
T  16286165 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaactaaatgcaacttgcatttaattttacattgaaaaagataatttgtttg 16286262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 30086630 - 30086727
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  30086630 ataattctcattggctaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgtatttaattttacattggaaaagatgatttgtttg 30086727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 31316883 - 31316980
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  31316883 ataattctcattggttaaaaattatggagaaaataaaaaggtgaacagattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttg 31316980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 24432482 - 24432579
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| |||||||||||| ||||    
T  24432482 ataattctcattggttaaaaattatggagaaaataaaaaggataacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttatttg 24432579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 35462800 - 35462897
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||| ||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  35462800 ataattctcattggttaaaaattatgaagaaaataaaaaggataataaattgaatgaaatttgcatttaattttacattgaaaaagatgttttgtttg 35462897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 25962530 - 25962631
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgca----atttgcatttaattttacattgaaaaagatgatttgtt 105  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    | ||||||||||||||||||||||||||||||||||||    
T  25962530 ataattctcattggttaaaaattatggagaaaataaaaagtagaacaaattaaatgcaaatgacttgcatttaattttacattgaaaaagatgatttgtt 25962629  T
Q  106 tg 107  Q
    ||    
T  25962630 tg 25962631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 2002217 - 2002312
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| |||||||||  |||||||||| |||| |||||||||||||||||||||||||||||||||||||||  ||| |||||||||||| ||||    
T  2002217 aattcttattggttaatgattatggagagaatagaaaggagaacaaattgaatgcaatttgcatttaattttattttggaaaagatgatttttttg 2002312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 8144009 - 8143914
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||  |||||||||||||||||| | |||||||||||||||||||||  |||||||||||| |||||||||| ||||| ||||    
T  8144009 aattctcattggttaatgattatggagaaaataaaatgtagaacaaattgaatgcaatttatatttaattttactttgaaaaagaagatttatttg 8143914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 24439647 - 24439558
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||| ||||||| |||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||    
T  24439647 aattatcattggctaattattatggaaaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttactttg-gaaagatgattt 24439558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 28907122 - 28907055
Alignment:
Q  36 gagaaaat-aaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||  |||||||||||| ||||    
T  28907122 gagaaaatgaaaaaagagaacaaattgaatgcactttgcatttaattttctattgaaaaagataattt 28907055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 28943517 - 28943450
Alignment:
Q  36 gagaaaat-aaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||  |||||||||||| ||||    
T  28943517 gagaaaatgaaaaaagagaacaaattgaatgcactttgcatttaattttctattgaaaaagataattt 28943450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 20452543 - 20452593
Alignment:
Q  49 ggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatga 99  Q
    |||||||||||||||| |||||| |||||||||||||| ||||| ||||||    
T  20452543 ggagaacaaattgaatacaatttacatttaattttacaatgaaagagatga 20452593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 3463917 - 3463970
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| |||||||| |||| |||| ||||||||||||| |||||||||||||||    
T  3463917 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 3463970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 42273705 - 42273654
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||||||||| |||  |||||  ||||||||||||||||||||||||||||    
T  42273705 ttatggagaaaatgaaagagagaa--aattgaatgcaatttgcatttaatttta 42273654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 445990 - 446043
Alignment:
Q  29 aattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattt 82  Q
    ||||| ||||||||| |||  ||||| |||||||||||||||| ||||||||||    
T  445990 aattacggagaaaatgaaagagagaaaaaattgaatgcaattttcatttaattt 446043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 15006413 - 15006450
Alignment:
Q  47 aaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  15006413 aaggataacaaattgaatgcaatttgtatttaatttta 15006450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 8146781 - 8146705
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||| | | ||||| |||||| | || |||||||||||||||| |  |||||||| ||||||| ||||    
T  8146781 ttatggagaaaatgagagggagagcaaattaattgtaatttgcatttaatttcattttgaaaaaaatgatttttttg 8146705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 3e-48; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 5091621 - 5091718
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5091621 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 5091718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 792437 - 792633
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg-n 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||      
T  792437 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttctttgaa 792536  T
Q  109 nnnnnncaataataacataaaagttggtcnnnnnnngcttatattttgaaacaaataatatgaaannnnnnngcttatattttaggatggagggagta 206  Q
           ||||||||||||||||||||||       ||||||||||||| ||||| ||||||| |       ||||||||||||||| ||||||||||    
T  792537 aaaacataataataacataaaagttggtc-ttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaggacggagggagta 792633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 4033756 - 4033853
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4033756 ataattctcgttggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttacattgaaaaagatgttttgtttg 4033853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 8784470 - 8784373
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8784470 ataattcttattgattaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 8784373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 14565454 - 14565551
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||    
T  14565454 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaatttgcatttaattttacattggaaaagatgatttctttg 14565551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 21539832 - 21539735
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  21539832 ataattctcattgggtaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 21539735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 10478253 - 10478156
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||| |||||||||    
T  10478253 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatcatttgtttg 10478156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 29514100 - 29514197
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29514100 ataattttcattggttaaaaattatagagaaaataaaaatgagaacaaattgaatgcaatttgcatttaattttacattaaaaaagatgatttgtttg 29514197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 33635411 - 33635314
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||    
T  33635411 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattagaaaagatgatttgtttg 33635314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 43075825 - 43075728
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  43075825 ataattttcattggttaaaaattatggagaaaataaaaaggaaaacaaattgaatgcaatttgcatttaattttacattggaatagatgatttgtttg 43075728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 43451580 - 43451483
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  43451580 ataattttcattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttg 43451483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 44803973 - 44803881
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  44803973 ataattctcattggttaaaaattatggagaaaataaataggagaacaaattgaatgcaatttgtatttaattttacattggaaaagatgattt 44803881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 4092086 - 4091989
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  4092086 ataattctcaatggttaaaaattatggaaaaaacaaaaaggagaacaaattgaatgcaacttgcatttaattttacattgaaaaagatgatttatttg 4091989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 28424337 - 28424252
Alignment:
Q  22 ggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  28424337 ggttaaaaattatggagaaaataaaaaggagaacaaattgaatacaatttgcatttaattttacattggaaaagatgatttgtttg 28424252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 28492595 - 28492498
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  28492595 ataattctcattggttaaaaattatagagaaaataaaaaggagaataagttgaatgcaatttgcatttaattttacattggaaaaaatgatttgtttg 28492498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 29514556 - 29514653
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||  ||||||||||||||||    
T  29514556 ataattttcattggttaaaaattatggagaaaataaaaaggacaacaaattgaatgcaatttacatttaattttacattgggaaagatgatttgtttg 29514653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 35832487 - 35832390
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  35832487 ataattctcattagttaaaaattatggagaaaataaaaaggtgaacagattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttg 35832390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 38549724 - 38549821
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||    
T  38549724 ataattctcattggttaaaaattatggagaaaacaaaaatgagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttatttg 38549821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 15068808 - 15068718
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||||| |||||||||  |||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  15068808 aattcttattggttaatgattatggagagaatagaaaggagaacaaattgaatgcaatttgcatttaattttactttggaaaagatgattt 15068718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 18833993 - 18834082
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||    
T  18833993 aattatcattggttaattattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttac-tttagaaagatgattt 18834082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 9294728 - 9294638
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||||| |||||||||  |||||||||| |||| | || ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9294728 aattcttattggttaatgattatggagagaatagagagaagaacaaattgaatgcaatttgcatttaattttactttgaaaaagatgattt 9294638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 22162368 - 22162298
Alignment:
Q  37 agaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  22162368 agaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattggaaaagattatttgtttg 22162298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 13822854 - 13822943
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| |||||||||  |||||||||| |||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  13822854 attcttattggttaatgattatggagagaatagaaatgagaacaaattgaatgcaatttgcatttaattttactttgaaaaagattattt 13822943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 10979244 - 10979197
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaa 57  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||    
T  10979244 ataattctcattagttaaaaattatggagaaaataaaaaggagaacaa 10979197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 15858740 - 15858788
Alignment:
Q  59 ttgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  15858740 ttgaatgcaatttgcatttaattttacattggaaaagatgatttatttg 15858788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 102
Target Start/End: Complemental strand, 12872168 - 12872107
Alignment:
Q  41 aataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||| ||||||||| ||||| |||| |||||| |||||||||||| ||||||||||||||||    
T  12872168 aatagaaaggagaataaattaaatgaaatttgtatttaattttactttgaaaaagatgattt 12872107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 26998376 - 26998304
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||||||||||| | ||| ||||||| ||||    
T  26998376 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt 26998304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 32010161 - 32010089
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| |||||||| |||| |||| |||||| |||||| ||||||||||||||| | ||||||||||| ||||    
T  32010161 attatagagaaaatgaaaaagagagcaaattaaatgcactttgcatttaattttcctttgaaaaagataattt 32010089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 20380182 - 20380115
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagat 97  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||||||||||| | ||| |||||||    
T  20380182 attatagagaaaatgaaaacgagagcaaattgaatgcactttgcatttaattttcctttggaaaagat 20380115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 38071571 - 38071616
Alignment:
Q  62 aatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||| || ||||||||||||| |||||||||||||||||    
T  38071571 aatgcaatttgtatataattttacattggaaaagatgatttgtttg 38071616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 8032790 - 8032842
Alignment:
Q  50 gagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||| ||||||||||||| ||||||||||||||| | ||||||||||| ||||    
T  8032790 gagagcaaattgaatgcattttgcatttaatttttctttgaaaaagataattt 8032842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 9709572 - 9709526
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatt 76  Q
    ||||| |||||||| |||  |||||||||||||||||||||||||||    
T  9709572 attattgagaaaatgaaagagagaacaaattgaatgcaatttgcatt 9709526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 32273730 - 32273677
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||| |||||||||||    
T  32273730 attatagagaaaatgaaaaagagagcaaattgaatgcactttacatttaatttt 32273677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 38071531 - 38071568
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaa 47  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  38071531 ataattctcattggttaaaaattatgaagaaaaaaaaa 38071568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 44442190 - 44442137
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| |||||||| |||| || | ||||||||||||| |||||||||||||||    
T  44442190 attatagagaaaatgaaaaagatagcaaattgaatgcactttgcatttaatttt 44442137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 11031025 - 11031077
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    |||| |||||||| |||  |||| ||||||||||||| |||||||||||||||    
T  11031025 ttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 11031077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 5e-47; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 10 - 207
Target Start/End: Original strand, 44411292 - 44411490
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg-n 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||      
T  44411292 ataattctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgaa 44411391  T
Q  109 nnnnnncaataataacataaaagttggtcnnnnnnngcttatattttgaaacaaataatatgaaannnnnnngcttatattttaggatggagggagtac 207  Q
           ||||||| ||||||||||||||       ||||||||||||| | ||| ||||||| |       ||||||||||||||| |||||||||||    
T  44411392 aaaatataataatagcataaaagttggtctttttttgcttatattttgagaaaaagaatatgagaatttttagcttatattttaggacggagggagtac 44411490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 3100031 - 3099934
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3100031 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 3099934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 24612563 - 24612660
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24612563 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttgcatttaattttacattgaaaaagatgatttgtttg 24612660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 27621208 - 27621111
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27621208 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 27621111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 44052699 - 44052602
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  44052699 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 44052602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 10 - 105
Target Start/End: Complemental strand, 34713606 - 34713511
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtt 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34713606 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtt 34713511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 31133112 - 31133209
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31133112 ataattctcattggttaaaaattatggagaaaataaaaaggagaaaaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 31133209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 35260135 - 35260038
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  35260135 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatggaatttgcatttaattttacattggaaaagatgatttgtttg 35260038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 37598148 - 37598051
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  37598148 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaaaatgatttgtttg 37598051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 11992806 - 11992709
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11992806 ataattctcattggttaaaaattatggagaaaagaaaaaggtgaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 11992709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 27752664 - 27752567
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  27752664 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 27752567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 39187311 - 39187214
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  39187311 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaatgatgatttgtttg 39187214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 44358574 - 44358671
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  44358574 ataattctcattaattaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 44358671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 37567514 - 37567608
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgt 104  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  37567514 ataattctcattgattaaaaattatggagaaaataaaaaggaaaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgt 37567608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 32678592 - 32678689
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  32678592 ataattctcattggttaaaaattatggagaaaataaaaagaagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 32678689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 35346387 - 35346484
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  35346387 ataattctcattggttaaaaattatggagataataaaaaggagaatacattgaatgcaatttgcattcaattttacattgaaaaagatgatttgtttg 35346484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 35344445 - 35344347
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattga-aaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  35344445 ataattctcattggttaaaaattatggagaaaataaaaaggagaatacattgaatgcaatttgcatttaattttacattgaaaaaaaatgatttgtttg 35344347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 11044135 - 11044038
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||| ||||    
T  11044135 ataattctcattggttaaaaattatggagaaaacaaaaaggagaacaaattgaatgcaacttgcatttaattttacattggaaaatatgatttatttg 11044038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 36538136 - 36538039
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  36538136 ataattctcattggttaaaaatcatggagaaaataaaaaggagaataaattaaatgcaaattgcatttaattttacattggaaaagatgatttgtttg 36538039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 12108240 - 12108151
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  12108240 tcattggttaaaaattatggagaaaataaaaaggaaaacaaattgaatgcaatttgcattgaattttacattgaaaaa-atgatttgtttg 12108151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 25321669 - 25321766
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| |||| |||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  25321669 ataattttcataggttaaaaattatggagaaaataaaaaggagagcaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 25321766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 33851106 - 33851203
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||| ||||||||| ||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  33851106 ataattctcattagttaaaaatcatggagaaaataaaaaggaaaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 33851203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 41426408 - 41426325
Alignment:
Q  19 attggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||||||||  |||||||||| |||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41426408 attggttaatgattatggagataatagaaaggataacaaattgaatgcaatttgcatttaattttactttgaaaaagatgattt 41426325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 2238685 - 2238773
Alignment:
Q  19 attggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||| ||| ||||||  |||| ||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| ||||    
T  2238685 attggttaataatcatggagtgaatagaaaggagaacaaattgaatgcgatttgcatttaattttactttggaaaagatgatttttttg 2238773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 16643457 - 16643369
Alignment:
Q  14 ttctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||||||||| ||  |||||||||||||||||||||| || || ||||||| ||||||||||||||||||| || |||||| ||||||    
T  16643457 ttctcattggtcaatgattatggagaaaataaaaaggaaaataacttgaatgtaatttgcatttaattttacttttaaaaagttgattt 16643369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 24510787 - 24510875
Alignment:
Q  19 attggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||  |||||||| | ||||||||| ||||||||||||||||||||||||||||||  ||| ||| |||| ||||||| ||||    
T  24510787 attggttaatgattatggatagaataaaaagtagaacaaattgaatgcaatttgcatttaatactactttggaaaaaatgatttttttg 24510875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 27819715 - 27819644
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||| |||||||||||| ||||| |||||| |||| | ||||||||||||||| | ||||||||||||||||    
T  27819715 ttatagagaaaataaaagggagagcaaattaaatgtagtttgcatttaattttcctttgaaaaagatgattt 27819644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 107
Target Start/End: Original strand, 40487794 - 40487845
Alignment:
Q  56 aaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||| ||||||| |||||||||||| |||||||||||||||||    
T  40487794 aaattgaatgcaacttgcattgaattttacattggaaaagatgatttgtttg 40487845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 41791563 - 41791635
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| ||||||||||||| |||| ||||||||||||| ||| |||||||||||   ||| ||||||||||||    
T  41791563 attatagagaaaataaaaaagagagcaaattgaatgcattttacatttaattttcttttggaaaagatgattt 41791635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 25195149 - 25195216
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagat 97  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||||||||||| | ||| |||||||    
T  25195149 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttttctttggaaaagat 25195216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 17314887 - 17314834
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| |||||||| ||||||||| ||||||||||||| |||| ||||||||||    
T  17314887 attatagagaaaatgaaaaggagagcaaattgaatgcactttggatttaatttt 17314834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 17336799 - 17336746
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| ||| |||| ||||||||| ||||||||||||| |||||||||||||||    
T  17336799 attatagagtaaatgaaaaggagagcaaattgaatgcactttgcatttaatttt 17336746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 34899979 - 34899910
Alignment:
Q  33 atggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||||||| || |||| | ||||||||||||| |||| |||||||||||||| ||  ||||||||||||    
T  34899979 atggagaaagtataaagaaaaacaaattgaatgaaattagcatttaattttactttagaaaagatgattt 34899910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 8673438 - 8673366
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| |||||||| |||| |||| ||||||||||| | ||||||||||||||| | ||| ||||||| ||||    
T  8673438 attatagagaaaatgaaaaagagagcaaattgaatgtactttgcatttaattttcctttggaaaagataattt 8673366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 16635488 - 16635429
Alignment:
Q  43 taaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||||||| ||||| |||||||||||||| ||| |||||||| ||  ||||||||||||    
T  16635488 taaaaaggaaaacaacttgaatgcaatttgaattaaattttacttttgaaaagatgattt 16635429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 16635756 - 16635697
Alignment:
Q  43 taaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||||||| ||||| |||||||||||||| ||| |||||||| ||  ||||||||||||    
T  16635756 taaaaaggaaaacaacttgaatgcaatttgaattaaattttacttttgaaaagatgattt 16635697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 4038984 - 4039037
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||| |||||||||||    
T  4038984 attatagagaaaatgaaaaagagagcaaattgaatgcactttacatttaatttt 4039037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 29147340 - 29147393
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| |||||||| ||| ||||| |||||| |||||| |||||||||||||||    
T  29147340 attatagagaaaatgaaatggagatcaaattaaatgcagtttgcatttaatttt 29147393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 36190828 - 36190775
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||| |||||||||  ||||  |||||||||| ||||||||||||||||||    
T  36190828 ttatggaaaaaataaaagagagagaaaattgaatgtaatttgcatttaatttta 36190775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 40486575 - 40486628
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaa 63  Q
    |||||| | ||| ||||||||||| ||||||||||||||| |||| ||||||||    
T  40486575 ataatttttattagttaaaaattaaggagaaaataaaaagaagaataaattgaa 40486628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 2628247 - 2628339
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||||| ||||||||||    |||| |||||||| |||  |||| |||||||||| || |||||||| |||||| | ||||||||||| ||||    
T  2628247 ataattttcattggttattgcttattgagaaaatgaaagagagagcaaattgaattcactttgcattaaattttcctttgaaaaagataattt 2628339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 14576249 - 14576301
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    |||| |||||||| |||  |||| ||||||||||||| |||||||||||||||    
T  14576249 ttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 14576301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 41362410 - 41362482
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| |||||||| |||| | || |||||| |||||| ||||||||||||||| | ||| ||||||| ||||    
T  41362410 attatagagaaaatgaaaaagtgagcaaattaaatgcactttgcatttaattttcctttggaaaagataattt 41362482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 5e-47; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 43107945 - 43108142
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgnn 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||      
T  43107945 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 43108044  T
Q  110 nnnnnc--aataataacataaaagttggtcnnnnnnngcttatattttgaaacaaataatatgaaannnnnnngcttatattttaggatggagggagta 206  Q
         |  ||||||||||||||||||||||       ||||||||||||| ||||| ||||||| |       |||||||||||||||  |||||||||    
T  43108045 aaaaacataataataacataaaagttggtc-ttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaggaccgagggagta 43108142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 23106527 - 23106430
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23106527 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 23106430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 35181266 - 35181169
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35181266 ataattctcattgggtaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 35181169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 45598978 - 45598881
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45598978 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 45598881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 48879462 - 48879365
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  48879462 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttttttg 48879365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 22111370 - 22111467
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22111370 ataattctcattggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttacattgaaaaatatgatttgtttg 22111467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 40583219 - 40583122
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40583219 ataattctcattggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttacattgaaaaatatgatttgtttg 40583122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 3157510 - 3157413
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  3157510 ataattctcattggttaaaaattatggagaaaataaaaaggaaaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 3157413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 34808293 - 34808196
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  34808293 ataattcttattggttaaaaattatggagaaaataaaaaggtgaacaaattgaatgcaatttgcatttaattttacgttgaaaaagatgatttgtttg 34808196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 41889245 - 41889148
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||||||    
T  41889245 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgctttgaattttacattggaaaagatgatttgtttg 41889148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 47383480 - 47383383
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  47383480 ataattctcattggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttacatttaattttacattggaaaagatgatttgtttg 47383383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 18206359 - 18206456
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||    
T  18206359 ataattctcattggttaaaaattatggaaaaaataaaaaggagaacaaattaaatacaacttgcatttaattttacattgaaaaagatgatttgtttg 18206456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 19933095 - 19933192
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  19933095 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 19933192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 19964234 - 19964331
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  19964234 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 19964331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 21654161 - 21654258
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  21654161 ataattctcattggttaaaaattatggagaaaatgaaaaggagaacaaattgaatgtaatttgcatttaattttacattggaaaaggtgatttgtttg 21654258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 40560456 - 40560359
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  40560456 ataattctcattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 40560359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 42617745 - 42617648
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  42617745 ataattctaattggttaaaaattatggagaaaataaaaaggagcacaaattgaatgcaatttgcatttaattttacattgaaaaaaataatttgtttg 42617648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 48937929 - 48938026
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  48937929 ataattcttattggttaaaaattatggagaaaataaaaagtagaacaaattgaatgcaatttgtatttaattttacattggaaaagatgatttgtttg 48938026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 48942955 - 48943052
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  48942955 ataattcttattggttaaaaattatggagaaaataaaaagtagaacaaattgaatgcaatttgtatttaattttacattggaaaagatgatttgtttg 48943052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 23731634 - 23731537
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  23731634 ataattctcgttgattaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 23731537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 36576492 - 36576395
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||    
T  36576492 ataattttcattggttaaaaattatggagaaaacaaaaaggagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttatttg 36576395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 41815733 - 41815830
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||| ||||||| ||||    
T  41815733 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttacatttaattttacattggaaaatatgatttatttg 41815830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 41890282 - 41890379
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||  |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  41890282 ataattctcattaattaaaaattatggagaaaataaaaagaagaacaaattgaatgtaatttgcatttaattttacattaaaaaagatgatttgtttg 41890379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 32491147 - 32491244
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||  |||||||||||||||||    
T  32491147 ataattttcattggttaaaaattatggagaaaacaaaaaggagaacaaattaaatgcaacttgcatttaattttacattcgaaaagatgatttgtttg 32491244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 7989348 - 7989432
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaa 94  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  7989348 ataattctcattggttaaaaattatgaagaaaataaaaaggataacaaattgaatgcaacttgcatttaattttacattgaaaaa 7989432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 207
Target Start/End: Complemental strand, 44600520 - 44600323
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg-n 108  Q
    |||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| || |||||||||||| ||||      
T  44600520 ataattttcattggttaaaaattatggagaaaacaaaaaagagaacaaattgaatgcaacttgcatttaattttacactggaaaagatgatttatttgaa 44600421  T
Q  109 nnnnnncaataataacataaaagttggtcnnnnnnngcttatattttgaaacaaataatatgaaannnnnnngcttatattttaggatggagggagtac 207  Q
           ||||||||||||||||||||||       ||||||||||||| ||||| || |||| |       ||||||||||||||| |||||||||||    
T  44600420 aaaacataataataacataaaagttggtc-ttttttgcttatattttgagacaaagaaaatgagatttttttgcttatattttaggacggagggagtac 44600323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 33153111 - 33153016
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| |||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||    
T  33153111 aattcttattggttaatgattatggagaaaatagaaaggagaacaaattgaatgcaatttgcatttaattttactttgaaaaagataatttttttg 33153016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 30082425 - 30082330
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| |||||||||  |||||||||| |||| ||| ||||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  30082425 aattcttattggttaatgattatggagagaatagaaaagagaataaattgaatgcaatttgcatttaattttactttggaaaagatgatttttttg 30082330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 35084143 - 35084233
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||||| ||||| |||  |||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||| ||| ||||||||    
T  35084143 aattcttattggataatgattatggagaaaatgaaaaggagaacaaattcaatgcaatttgcatttaattttactttggaaaggatgattt 35084233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 9818542 - 9818427
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgnn 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||           | |||||||||||||||||| |||||||||||||||||      
T  9818542 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaa-----------tggcatttaattttacattggaaaagatgatttgtttgaa 9818454  T
Q  110 nnnnncaataataacataaaagttggtc 137  Q
          ||||||||||||||||||||||    
T  9818453 aaaaa-aataataacataaaagttggtc 9818427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 137
Target Start/End: Complemental strand, 10720467 - 10720352
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgnn 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||           | |||||||||||||||||| |||||||||||||||||      
T  10720467 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaa-----------tggcatttaattttacattggaaaagatgatttgtttgaa 10720379  T
Q  110 nnnnncaataataacataaaagttggtc 137  Q
          ||||||||||||||||||||||    
T  10720378 aaaaa-aataataacataaaagttggtc 10720352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 39337584 - 39337512
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||| |||||  ||| ||||||||||||    
T  39337584 attatggagaaaatagaaaggagaacaatttgaatgcaatttgcatttagttttaatttggaaaagatgattt 39337512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 39348843 - 39348776
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagat 97  Q
    ||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||| ||| |||||||    
T  39348843 attatcgagaaaatagaaaggagaacaaattgaatacaatttgcatttaattttactttggaaaagat 39348776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 28608445 - 28608363
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaa 94  Q
    |||||| |||||| ||  |||||||||| |||| ||| |||||||||||||||||||||||||||||||||||| ||| ||||    
T  28608445 aattcttattggtcaattattatggagagaatagaaaagagaacaaattgaatgcaatttgcatttaattttactttggaaaa 28608363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 29236117 - 29236204
Alignment:
Q  19 attggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||  |||||||||| |||||||||||||| ||||||||||||||||  |||||||||||| | | |||||||||||| ||||    
T  29236117 attggttaatgattatggagagaataaaaaggagaa-aaattgaatgcaatttatatttaattttacttcgtaaaagatgatttttttg 29236204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 18800834 - 18800906
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||||||||  |||| |||  ||| ||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  18800834 attatggagggaatagaaataagagcaaattgaatgcaatttacatttaattttactttgaaaaagatgattt 18800906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 31769063 - 31769130
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagat 97  Q
    ||||| ||||||||||||| |||| ||||||||||||| ||||||||||||||| | ||| |||||||    
T  31769063 attatagagaaaataaaaatgagagcaaattgaatgcactttgcatttaattttcctttggaaaagat 31769130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 35888070 - 35888142
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| ||||||||||||| |||| ||||||||||||| ||||||||| ||||| | ||| ||||||| ||||    
T  35888070 attatagagaaaataaaaaagagagcaaattgaatgcactttgcattttattttcctttggaaaagataattt 35888142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 48339322 - 48339389
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagat 97  Q
    ||||||||||||||| |||| |||| ||||| |||||| ||||||||||||||||  ||| |||||||    
T  48339322 attatggagaaaatagaaagaagaataaattaaatgcagtttgcatttaattttagtttggaaaagat 48339389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 6882439 - 6882387
Alignment:
Q  50 gagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||||||||| |||||||||| ||||||||||| | |||||||| |||||||    
T  6882439 gagaacaaattaaatgcaattttcatttaatttttctttgaaaaatatgattt 6882387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 25944634 - 25944581
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||| |||||||||  ||||  |||||||||| ||||||||||||||||||    
T  25944634 ttatggaaaaaataaaagagagagaaaattgaatgtaatttgcatttaatttta 25944581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 38260395 - 38260322
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    |||||| ||||||||||   ||||| |||||||| |||  |||| |||||| |||||| |||||||||||||||    
T  38260395 ataattttcattggttatttattattgagaaaatgaaagagagagcaaattaaatgcactttgcatttaatttt 38260322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 8e-46; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 206
Target Start/End: Original strand, 30776532 - 30776728
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg-n 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||      
T  30776532 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttctttgaa 30776631  T
Q  109 nnnnnncaataataacataaaagttggtcnnnnnnngcttatattttgaaacaaataatatgaaannnnnnngcttatattttaggatggagggagta 206  Q
           ||||||||||||||||||||||       ||||||||||||| ||||||||||||| |       ||||||||||||||| ||||||||||    
T  30776632 aaaacataataataacataaaagttggtc-ttttttgcttatattttgagacaaataatatgagatttttttgcttatattttaggacggagggagta 30776728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 30777559 - 30777363
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg-n 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||      
T  30777559 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttctttgaa 30777460  T
Q  109 nnnnnncaataataacataaaagttggtcnnnnnnngcttatattttgaaacaaataatatgaaannnnnnngcttatattttaggatggagggagta 206  Q
           ||||||||||||||||||||||       ||||||||||||| ||||||||||||| |       ||||||||||||||| ||||||||||    
T  30777459 aaaacataataataacataaaagttggtc-ttttttgcttatattttgagacaaataatatgagatttttttgcttatattttaggacggagggagta 30777363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 53677527 - 53677624
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  53677527 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 53677624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 1620101 - 1620004
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1620101 ataattctcattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgcaaattgcatttaattttacattgaaaaagatgatttgtttg 1620004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 3043215 - 3043312
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3043215 ataattctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 3043312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 32012375 - 32012472
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32012375 ataattctcattggttaaaaattatagagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 32012472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 39970037 - 39970130
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttg 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39970037 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttg 39970130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 43980570 - 43980473
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  43980570 ataattctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 43980473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 49902099 - 49902002
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  49902099 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttg 49902002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 10591551 - 10591648
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10591551 ataattctcattggttaaaaattatggaaaaaataaaaaggagaaccaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 10591648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 29180460 - 29180557
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  29180460 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagataatttctttg 29180557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 47807267 - 47807170
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  47807267 ataattctcgttggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttctttg 47807170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 51495218 - 51495125
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgttt 106  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  51495218 attctcattggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttacattggaaaagatgatttgttt 51495125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 37788523 - 37788426
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  37788523 ataattctcattggttaaaaattatggagaaaataaaaaagagaacaaattaaatgcaagttgcatttaattttacattggaaaagatgatttgtttg 37788426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 38187774 - 38187871
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  38187774 ataattctcatttgttaaaaattatggagaaaataaaaaagagaacaaattgaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 38187871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 50768517 - 50768420
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  50768517 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 50768420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 52713135 - 52713038
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  52713135 ataattcttattggttgaaaattatggagaaaataaaaaggagaacaaattaaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 52713038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 9798123 - 9798220
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  9798123 ataattctcattgattacaaattatggagaaaataaaaaggagaacacattgaatccaatttgcatttaattttacattggaaaagatgatttgtttg 9798220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 55937751 - 55937848
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||| |||||||||||||||||||| |||||||||||||||||    
T  55937751 ataattctcattggttaaaaattatggagaagataaaaaggagaacaaattaaatacaacttgcatttaattttacattggaaaagatgatttgtttg 55937848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 29899787 - 29899690
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||| ||| |||||||||||||| ||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  29899787 ataattctcattggttaaaaatcatgaagaaaataaaaaggtgaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 29899690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 38940941 - 38940844
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||| ||||||||| |||| ||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38940941 ataattctcattgattaaaaattttggaaaaaataaaaagaagaataaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 38940844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 27750409 - 27750493
Alignment:
Q  23 gttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  27750409 gttaaaaattatggaaaaaataaaaagaagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 27750493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 30012004 - 30012091
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||| |||||||||||  |||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||  |||||||||||    
T  30012004 aattatcattggttaattattatggagaaaataaaaa--agaacaaattgaatgcaatttgcatttaattttactttg-gaaagatgattt 30012091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 5234059 - 5234124
Alignment:
Q  19 attggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    |||||||||  ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  5234059 attggttaattattatggagaaaataaaaaggagaataaattgaatgcaatttacatttaatttta 5234124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 5222370 - 5222433
Alignment:
Q  39 aaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||| |||| |||||||    
T  5222370 aaaataaaaaggagaacaaattcaatgcaatttgcatttaattttactttggaaaaaatgattt 5222433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 7652121 - 7652182
Alignment:
Q  33 atggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaa 94  Q
    |||||||||||| || |||||||||||||| || ||||| ||||||||||||| ||||||||    
T  7652121 atggagaaaatagaatggagaacaaattgagtgaaattttcatttaattttactttgaaaaa 7652182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 100
Target Start/End: Original strand, 17799230 - 17799299
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgat 100  Q
    ||||||||||||| | | |||||||||||| ||||||||||||||||| ||| || ||| ||||||||||    
T  17799230 ttatggagaaaatgagagggagaacaaattaaatgcaatttgcatttagtttcactttggaaaagatgat 17799299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 40553839 - 40553754
Alignment:
Q  17 tcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||||||||  | ||||||||||| | |||||||||  ||| |||||||||||||||||||||||  | ||| ||||||||||||    
T  40553839 tcattggttattagttatggagaaagtgaaaaggagagtaaaatgaatgcaatttgcatttaatttctctttggaaaagatgattt 40553754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 23978210 - 23978282
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||||||||||| | ||| ||||||| ||||    
T  23978210 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttttctttggaaaagataattt 23978282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 5064750 - 5064817
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagat 97  Q
    ||||| |||||||| |||| ||||  |||||||||||| ||||||||||||||| | |||||||||||    
T  5064750 attatagagaaaatgaaaaagagagtaaattgaatgcactttgcatttaattttcctttgaaaaagat 5064817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 37911941 - 37911874
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagat 97  Q
    ||||| ||||||||||||| |||| |||||| |||||| ||||||||||||||| | ||| |||||||    
T  37911941 attatagagaaaataaaaaagagagcaaattcaatgcactttgcatttaattttcctttggaaaagat 37911874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 32410386 - 32410332
Alignment:
Q  29 aattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    |||||| ||||||||||||| |||| |||||||||| || |||||||||||||||    
T  32410386 aattatagagaaaataaaaaagagagcaaattgaatacactttgcatttaatttt 32410332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 40411152 - 40411091
Alignment:
Q  36 gagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagat 97  Q
    |||||||| |||| |||| ||||||||||||| ||| ||||||||||||| || ||||||||    
T  40411152 gagaaaatgaaaaagagatcaaattgaatgcagtttacatttaattttactttaaaaaagat 40411091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 49080306 - 49080250
Alignment:
Q  38 gaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaa 94  Q
    |||||| |||| |||| ||||||||||||| ||||||||||||||| | ||||||||    
T  49080306 gaaaatgaaaaagagatcaaattgaatgcactttgcatttaattttcctttgaaaaa 49080250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 84
Target Start/End: Original strand, 17236342 - 17236373
Alignment:
Q  53 aacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||||||||||||||||||||||||||||    
T  17236342 aacaaattgaatgcaatttgcatttaatttta 17236373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 55 - 102
Target Start/End: Complemental strand, 53848499 - 53848452
Alignment:
Q  55 caaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||||||||||| |||||||||| |||| | ||||||||||||||||    
T  53848499 caaattgaatgcactttgcatttattttttctttgaaaaagatgattt 53848452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 8178335 - 8178387
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    |||| |||||||| |||  |||| ||||||||||||| |||||||||||||||    
T  8178335 ttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 8178387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 8e-46; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 26641156 - 26641253
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26641156 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttaccttgaaaaagatgatttgtttg 26641253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 49068127 - 49068030
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49068127 ataattctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 49068030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 53020259 - 53020162
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53020259 ataattctcattagttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 53020162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 23513643 - 23513546
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23513643 ataattctcattgggtaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgttttgtttg 23513546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 55400814 - 55400717
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  55400814 ataattctcattggttaaaaattatggagaaaataaaaaggtgaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 55400717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 10 - 207
Target Start/End: Complemental strand, 21654321 - 21654123
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttgnn 109  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||      
T  21654321 ataattttcatttgttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttgaa 21654222  T
Q  110 nnnnnc--aataataacataaaagttggtcnnnnnnngcttatattttgaaacaaataatatgaaannnnnnngcttatattttaggatggagggagtac 207  Q
         |  ||||||||||||||||||||||       ||||||||||||| ||||| ||||||| |       |||||||||||||||  ||||||||||    
T  21654221 aaaaacataataataacataaaagttggtc-ttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaggacagagggagtac 21654123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 52172057 - 52172151
Alignment:
Q  13 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  52172057 attctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttg 52172151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 1335186 - 1335089
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1335186 ataatttttattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 1335089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 31126288 - 31126191
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  31126288 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaaaatgatttgtttg 31126191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 37324128 - 37324225
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37324128 ataattctcattggttaaaaattatggagaaaataaaaagggaaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 37324225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 46580612 - 46580515
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  46580612 ataattctcattgattaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgtaaaatatgatttgtttg 46580515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 46296121 - 46296218
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| | |||||||||||||||||    
T  46296121 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacatcggaaaagatgatttgtttg 46296218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 32322283 - 32322380
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||| |||||||||||||||||||||||| |||||||||    
T  32322283 ataattctcattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgtatttaattttacattgaaaaagataatttgtttg 32322380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 51255262 - 51255165
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||| |||||||||||||||||    
T  51255262 ataattctcattagttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttagattggaaaagatgatttgtttg 51255165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 51426695 - 51426598
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  51426695 ataattttcattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgtaatttgcatttaattttacattagaaaagatgatttgtttg 51426598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 28793238 - 28793140
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaa-ttttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||  |||||||||||||||||    
T  28793238 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaatttttacattagaaaagatgatttgtttg 28793140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 43576033 - 43575936
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||  |||||||||||||||||    
T  43576033 ataattatcattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgcatttaattttacattagaaaagatgatttgtttg 43575936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 45781473 - 45781376
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||| |||||||||||||||| |||||||||||||||||    
T  45781473 ataattctcattggttaaaaattatggagaagataaaaatgagaacaaattaaatgcaacttgaatttaattttacattggaaaagatgatttgtttg 45781376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 52252112 - 52252015
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||| || |||||||||||||||||||| |||||||||||||||||    
T  52252112 ataattctcattgattaaaaattatggagaaaataaaaaagagaacaaattaaatgtaacttgcatttaattttacattggaaaagatgatttgtttg 52252015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 13541343 - 13541258
Alignment:
Q  20 ttggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtt 105  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  13541343 ttggttaaaaattatagagaaaataaaaaggaaaacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgtt 13541258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 16739204 - 16739296
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||     |||||||||||||||| |||||||||||||||||    
T  16739204 ataattctcattggttaaaaattatggagaaaataaaaaggaaaacaaattaaatgcaa-----atttaattttacattggaaaagatgatttgtttg 16739296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 46820103 - 46820029
Alignment:
Q  32 tatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgttt 106  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||    
T  46820103 tatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgttt 46820029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 36189052 - 36189142
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||||||||||||||  ||| || | |||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||| |||||    
T  36189052 aattctcattggttaatgattgtgaataaaataaaaaggtgaacaaattgaatgcaatttgcatttaattttactttggaaaagaagattt 36189142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 45347757 - 45347815
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45347757 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaa 45347815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 51309487 - 51309415
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    |||||| |||||||||  |||||||||| |||| ||||| |||||||||||||||||||||||||||||||||    
T  51309487 aattcttattggttaatgattatggagagaatagaaaggggaacaaattgaatgcaatttgcatttaatttta 51309415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 34022675 - 34022625
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaatt 60  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34022675 ataattctcattggttaaaaattatagagaaaataaaaaggagaacaaatt 34022625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 46303618 - 46303547
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    |||||| |||||||||  |||||||||||||||  ||| | |||||||| ||||||||||||||||||||||    
T  46303618 aattcttattggttaatgattatggagaaaataggaagaataacaaattaaatgcaatttgcatttaatttt 46303547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 21214298 - 21214245
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| ||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  21214298 attattgagaaaataaaaaagagagcaaattgaatgcactttgcatttaatttt 21214245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 25242239 - 25242292
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||| |||||||||    
T  25242239 attatagagaaaataaaaaagagaacaaattgaatgcactttgcgtttaatttt 25242292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 2994479 - 2994551
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||||||||||| | ||| ||||||| ||||    
T  2994479 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt 2994551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 22456069 - 22456141
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||||||||||| | ||| ||||||| ||||    
T  22456069 attatagagaaaatgaaaaagagagcaaattgaatgcattttgcatttaattttcctttggaaaagataattt 22456141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 22479115 - 22479187
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||||||||||| | ||| ||||||| ||||    
T  22479115 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt 22479187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 54725665 - 54725736
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||| ||||||||||||| |||| ||||||||||||| |||| ||||||||||   ||||||||||| ||||    
T  54725665 ttattgagaaaataaaaaagagagcaaattgaatgcactttgtatttaattttcttttgaaaaagataattt 54725736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 102
Target Start/End: Original strand, 7886660 - 7886750
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||| ||||||||||  | |||| |||||||| |||  |||| ||||||||||||| ||||||||| ||||| | ||| ||||||||||||    
T  7886660 aattttcattggttattagttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttgatttttctttggaaaagatgattt 7886750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 50651099 - 50651152
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    |||||||||||||||||  ||||  |||||||||| ||||||||||||||||||    
T  50651099 ttatggagaaaataaaagagagagaaaattgaatgtaatttgcatttaatttta 50651152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 47444034 - 47444106
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| |||||||| |||| || | ||||||||||||| ||||||||||||||| | ||| ||||||| ||||    
T  47444034 attatagagaaaatgaaaaagatagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt 47444106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 30454786 - 30454857
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||| |||||||| |||  |||| ||||||||||||| ||||||||||||||| | ||| ||||||| ||||    
T  30454786 ttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt 30454857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 7615008 - 7615054
Alignment:
Q  56 aaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||||||||||| ||||||||| |||| | ||||||||||||||||    
T  7615008 aaattgaatgcaagttgcatttagttttcctttgaaaaagatgattt 7615054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 20847329 - 20847383
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    |||||||||||||| |||  ||| | |||||||||| ||||||||||||||||||    
T  20847329 attatggagaaaatgaaagagaggaaaaattgaatgtaatttgcatttaatttta 20847383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 23209347 - 23209413
Alignment:
Q  36 gagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||||||| ||| |||||||| | |||||||||||||||||||||||  | |||  |||||||||||    
T  23209347 gagaaaatgaaagggagaacataatgaatgcaatttgcatttaatttctctttgggaaagatgattt 23209413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 8097059 - 8097132
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    |||||| ||||||||||    |||| |||||||| |||  |||| ||||||||||||| |||||||||||||||    
T  8097059 ataattttcattggttattgcttattgagaaaatgaaagagagagcaaattgaatgcactttgcatttaatttt 8097132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 35963214 - 35963161
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||||||||| |||  ||||  ||||| |||||||||||||||||||||||    
T  35963214 ttatggagaaaatgaaagagagagaaaattaaatgcaatttgcatttaatttta 35963161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 102
Target Start/End: Complemental strand, 49068599 - 49068546
Alignment:
Q  49 ggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||||||||||| || |||||||||||||| ||| || || |||||||||||||    
T  49068599 ggagaacaaattaaaagcaatttgcatttagtttcactttaaaaaagatgattt 49068546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 50730171 - 50730118
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||| |||||||||| ||||  |||||||||| ||||| ||||||||||||    
T  50730171 ttatggaaaaaataaaaaagagagaaaattgaatgtaatttacatttaatttta 50730118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 50782683 - 50782736
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    ||||||| |||||||||| ||||  |||||||||| ||||| ||||||||||||    
T  50782683 ttatggaaaaaataaaaaagagagaaaattgaatgtaatttacatttaatttta 50782736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 3972318 - 3972286
Alignment:
Q  50 gagaacaaattgaatgcaatttgcatttaattt 82  Q
    |||||||||||||||| ||||||||||||||||    
T  3972318 gagaacaaattgaatgtaatttgcatttaattt 3972286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 3997560 - 3997592
Alignment:
Q  50 gagaacaaattgaatgcaatttgcatttaattt 82  Q
    |||||||||||||||| ||||||||||||||||    
T  3997560 gagaacaaattgaatgtaatttgcatttaattt 3997592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 17587771 - 17587699
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| |||||||| |||  ||||||||||| |||||| ||| || |||||||| | || |||||||||||||    
T  17587771 attattgagaaaatgaaagagagaacaaattaaatgcactttacacttaatttttctttaaaaaagatgattt 17587699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 55400679 - 55400618
Alignment:
Q  145 gcttatattttgaaacaaataatatgaaannnnnnngcttatattttaggatggagggagta 206  Q
    ||||||||||||| ||||| |||||||||       ||||||||||||||| ||||||||||    
T  55400679 gcttatattttgagacaaagaatatgaaatttttttgcttatattttaggacggagggagta 55400618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 8e-46; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 44875254 - 44875157
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  44875254 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 44875157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 10 - 206
Target Start/End: Complemental strand, 46949396 - 46949200
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg-n 108  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||      
T  46949396 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatacaatttgcatttaattttacattgaaaaagatgatttgtttgaa 46949297  T
Q  109 nnnnnncaataataacataaaagttggtcnnnnnnngcttatattttgaaacaaataatatgaaannnnnnngcttatattttaggatggagggagta 206  Q
           ||||||||||||||||||||||       ||||||||||||| ||||| ||||||| |       ||||||||||||||| ||||||||||    
T  46949296 aaaacataataataacataaaagttggtc-ttttttgcttatattttgagacaaagaatatgagatttttttgcttatattttaggacggagggagta 46949200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 25990823 - 25990726
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25990823 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 25990726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 40960559 - 40960656
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  40960559 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattgaaaaagatgatttgtttg 40960656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 15285878 - 15285782
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15285878 ataattctcattggttaaaaattatggagaaaaaaaaaag-agaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 15285782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 28017733 - 28017636
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28017733 ataattatcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 28017636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 31970394 - 31970491
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  31970394 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 31970491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 40220131 - 40220035
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  40220131 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagat-atttgtttg 40220035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 40935698 - 40935795
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  40935698 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 40935795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 43656122 - 43656219
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  43656122 ataattttcattggttaaaaattatgaagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 43656219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 9128118 - 9128021
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9128118 ataattctcattggttaaaaattatggagaaaataaaaaggtaaataaattgaatgcaatttacatttaattttacattgaaaaagatgatttgtttg 9128021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 18036619 - 18036522
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  18036619 ataattctcattggttaaaaattatgaagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttactttggaaaagatgatttgtttg 18036522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 18852298 - 18852201
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| || |||||||||    
T  18852298 ataattctcattggttaaaaattatggagaaaataaaaaggggaacaaattgaatgcaatttgcatttaattttacattggaaaaaataatttgtttg 18852201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 23873912 - 23874009
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  23873912 ataattttcattggttaaaaattatggagaaaataaaaaagagaacaaattaaatgcaatttgcatttaattttacattggaaaagatgatttgtttg 23874009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 28916600 - 28916697
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  28916600 ataattttcattggttaaaaattatggagaaaataaaaagaagaacaaattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttg 28916697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 35941916 - 35941819
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  35941916 ataattttcattgattaaaaattatggagaaaataaaaaagagaacaaattgaatgcaatttgtatttaattttacattgaaaaagatgatttgtttg 35941819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 38942526 - 38942623
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||    
T  38942526 ataattttcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttgcatttaattttacattggaaaaaatgatttgtttg 38942623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 47997029 - 47996932
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||    
T  47997029 ataattctcattagttaaaaattatggagaaaataaaaaggagaacaaattgaatacaatttgtatttaattttacattggaaaagatgatttgtttg 47996932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 26907184 - 26907271
Alignment:
Q  20 ttggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26907184 ttggttaaaaattatggagaaaataaaaaggagaataaattgaatgcaatttgcatttaattttacattgaaaaagataatttgtttg 26907271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 29488821 - 29488726
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| || |||||||||    
T  29488821 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaacttgcatttaattttacattggaaaatattatttgtttg 29488726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 10 - 105
Target Start/End: Original strand, 6848391 - 6848486
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtt 105  Q
    |||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||| |||| |||||||||||||||    
T  6848391 ataattctcattggttaaaaattatggagaaaataaaaaggataacgcattgaatgcaatttgcatttaattttagattggaaaagatgatttgtt 6848486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 15311252 - 15311156
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||| ||||||||    
T  15311252 ataattctcattggttaaaaattatagagaaaataaaaaggagaacaaattgaatacaa-ctgcatttaattttacattgaaaaagatgttttgtttg 15311156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 26479814 - 26479717
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||| |||| |||||||||||| |||||||||||||||||    
T  26479814 ataattctcattggttaaaaactatagagaaaataaaaaggagaacatattgaatgcaattttcattgaattttacattggaaaagatgatttgtttg 26479717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 35189276 - 35189179
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| | |||||||||||||||||||||| |||||||||    
T  35189276 ataattttcattggttaaaaattatggagaaaataaagaggagaacacattgaatgcaatttgtagttaattttacattgaaaaagattatttgtttg 35189179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 45357961 - 45358058
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||  || |||||||||||||||| |||||||||||||||||    
T  45357961 ataattctcattggttaaaaattatggagaaaataaaaaggtgaacaaattaaatgcaacatgtatttaattttacattggaaaagatgatttgtttg 45358058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 49924494 - 49924397
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||| |||| || |||||||||||||||||||| |||||||||||||||||    
T  49924494 ataattctcattggttaaaaatcatgaagaaaataaaaaggagaacaaattaaatgtaacttgcatttaattttacattggaaaagatgatttgtttg 49924397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 4529262 - 4529165
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||  |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  4529262 ataattctcatctgttaaaaattatggagaaaacaaaaagaagaacaaattgaatgcaatttgcatttaattttacattggaaaaaatgatttatttg 4529165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 39026331 - 39026428
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||| |||| ||||||| ||||    
T  39026331 ataattcttattggttaaaaattatggagaaaataaaaaggagaataaattaaatgcaacttgcatttaattttacattggaaaatatgatttatttg 39026428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 18913430 - 18913528
Alignment:
Q  10 ataattctca-ttggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||| || ||||||||| |||||||| |||||||| |||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  18913430 ataattctcaattagttaaaaatcatggagaacataaaaagaagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 18913528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 35884286 - 35884212
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttta 84  Q
    |||||| |||||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||||||||    
T  35884286 ataattttcattggttaaaaattatagagaaaataaaaagaagaacacatttaatgcaatttgcatttaatttta 35884212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 36384001 - 36383912
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||| ||||||| |||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  |||||||||||    
T  36384001 aattatcattggctaattattatggagaaaataaaaaggaaaacaaattgaatgcaatttgcatttaattttactttg-gaaagatgattt 36383912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 44056385 - 44056471
Alignment:
Q  12 aattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatg 98  Q
    ||||||||||||||||  |||||||||||||||| |||||||  |||| |||||||| ||||||||||||||||  |||||||||||    
T  44056385 aattctcattggttaatgattatggagaaaataagaaggagagaaaatggaatgcaaattgcatttaattttactctgaaaaagatg 44056471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 102
Target Start/End: Original strand, 25185406 - 25185478
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| |||||||| |||| |||||||||||||||||| ||||||||||||||| | ||| ||||||| ||||    
T  25185406 attatagagaaaatgaaaaagagaacaaattgaatgcactttgcatttaatttttctttggaaaagataattt 25185478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 41063820 - 41063728
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||||| ||||||||||    |||| |||||||| |||  |||||||||||||||||| ||||||||||||||| | ||||||||||| ||||    
T  41063820 ataattttcattggttatttgttattgagaaaatcaaagagagaacaaattgaatgcactttgcatttaatttttctttgaaaaagataattt 41063728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 16661569 - 16661502
Alignment:
Q  36 gagaaaat-aaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||||||| ||||| |||||||||||||||||| |||||||||||||||  |||||||||||| ||||    
T  16661569 gagaaaatgaaaaaagagaacaaattgaatgcactttgcatttaattttctattgaaaaagataattt 16661502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 15912251 - 15912185
Alignment:
Q  36 gagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||||||| ||||||||| ||||||||||||| ||||||||||||||| | ||| |||| |||||||    
T  15912251 gagaaaatgaaaaggagagcaaattgaatgcagtttgcatttaatttttctttggaaaaaatgattt 15912185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 13351739 - 13351686
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||||||| ||||    
T  13351739 attatagagaaaatgaaaaggagaacaaattgaatgcactttgcatttagtttt 13351686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 44510321 - 44510374
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| |||||||| ||||||||| ||||||||||||| |||||||||||||||    
T  44510321 attatagagaaaatgaaaaggagagcaaattgaatgcactttgcatttaatttt 44510374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 5858474 - 5858545
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||| |||||||| |||  |||| ||||||||||||| ||||||||||||||| | ||||||||||| ||||    
T  5858474 ttattgagaaaatgaaacagagagcaaattgaatgcactttgcatttaattttcctttgaaaaagataattt 5858545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 7397765 - 7397693
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| |||||||| ||||  ||| ||||||||||||| ||||||||||||||| | ||| ||||||| ||||    
T  7397765 attatagagaaaatgaaaaaaagagcaaattgaatgcactttgcatttaattttcctttggaaaagataattt 7397693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 45840167 - 45840231
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaa 94  Q
    ||||| || ||||| |||| |||| ||||||||||||| ||||||||||||||| | ||||||||    
T  45840167 attatagaaaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttttctttgaaaaa 45840231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 42724152 - 42724082
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| ||||||| | | ||||| |||||| ||||||||||||||||||||| || ||| ||||||||||||    
T  42724152 ttatgaagaaaatgatagggagagcaaattaaatgcaatttgcatttaatttcactttg-aaaagatgattt 42724082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 34102095 - 34102146
Alignment:
Q  50 gagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||| |||||||| |||| ||||||||||||||| | ||||||||||||||||    
T  34102095 gagagcaaattga-tgcactttgcatttaattttcctttgaaaaagatgattt 34102146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 37735485 - 37735537
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattt 82  Q
    ||||||||||||||  ||| ||||  |||||||||| ||||||||||||||||    
T  37735485 attatggagaaaatggaaaagagagaaaattgaatgtaatttgcatttaattt 37735537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 8e-43; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 10 - 205
Target Start/End: Complemental strand, 12278781 - 12278586
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg-n 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||      
T  12278781 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacatttgaaaaaatgatttgtttgaa 12278682  T
Q  109 nnnnnncaataataacataaaagttggtcnnnnnnngcttatattttgaaacaaataatatgaaannnnnnngcttatattttaggatggagggagt 205  Q
           ||||||||||||||||||| ||       ||||||||||||| ||||| |||||||||       ||||||||||||||| |||||||||    
T  12278681 aaaacataataataacataaaagttgatc-ttttttgcttatattttgagacaaagaatatgaaatttttttgcttatattttaggacggagggagt 12278586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 10227987 - 10227890
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  10227987 ataattctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttatattggaaaagatgatttgtttg 10227890  T

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Target: chr6; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 33756331 - 33756234
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33756331 ataattctcattggttaaaaattatggagaaaatgaaaaggaggacaaattgaatgcaatttgcatttaattttacattgaaaaaaatgatttgtttg 33756234  T

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Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 17598368 - 17598271
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  17598368 ataattctcattggttaaaaattatggagaaaataaaaaagagaataaattgaatgcaatttgcatttaattttacattggaaaagaagatttgtttg 17598271  T

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Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 17721891 - 17721988
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  17721891 ataattctcatttgttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattggaaaatatgatttctttg 17721988  T

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Target: chr6; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 30949210 - 30949113
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  30949210 ataattctcattggttaaaaattatagagaaaataaaaaggagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 30949113  T

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Target: chr6; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 374174 - 374077
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||    
T  374174 ataattttcattggttaaaaattatagagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacatcggaaaatatgatttgtttg 374077  T

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Target: chr6; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 30766521 - 30766424
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||| ||||    
T  30766521 ataattctcattagttaaaaattatggagaaaataaaaaggagaacaaattcaatgcaatttgcatttaattttacattgaaaaaaataatttctttg 30766424  T

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Target: chr6; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 31887203 - 31887300
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    |||||| | |||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||    
T  31887203 ataatttttattggttaaaaattatggagaaaataaaaaagagaacaaattaaatgcaacttgcatttaattttacattggaaaagatgatttgtttg 31887300  T

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Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 3888484 - 3888412
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| |||||||| |||| |||||||||||||||||| ||||||||||||||| | ||||||||||| ||||    
T  3888484 attatagagaaaatgaaaaagagaacaaattgaatgcactttgcatttaattttcctttgaaaaagataattt 3888412  T

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Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 32882806 - 32882864
Alignment:
Q  41 aataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatga 99  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| ||| |||||||||    
T  32882806 aatagaaaggagaacaaattgaatgcgatttgcatttaattttactttggaaaagatga 32882864  T

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Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 21964009 - 21963941
Alignment:
Q  33 atggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    |||||||||||||||| |||||||||||| ||| ||||| ||||||||||||| || |||||||||||||    
T  21964009 atggagaaaataaaaaagagaacaaattgtatgaaatttacatttaattttac-tttaaaaagatgattt 21963941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 4988000 - 4987928
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| |||||||| |||| |||| ||||||||||||| ||||||||||||||| | ||||||||||| ||||    
T  4988000 attatagagaaaatgaaaatgagagcaaattgaatgcattttgcatttaattttcctttgaaaaagataattt 4987928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 102
Target Start/End: Complemental strand, 16655245 - 16655180
Alignment:
Q  37 agaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||||| ||| ||||| |||| |||||||||||||||||||||||  |||||||||| |||||||    
T  16655245 agaaaatgaaagggagagcaaaatgaatgcaatttgcatttaatttctcattgaaaaatatgattt 16655180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 4032044 - 4031991
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| |||||||| |||| |||| ||||||||||||| |||||||||||||||    
T  4032044 attatagagaaaatgaaaaagagagcaaattgaatgcactttgcatttaatttt 4031991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 16524436 - 16524384
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    ||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||    
T  16524436 attatagagaaaatgaaaag-agaacaaattgaatgcactttgcatttaatttt 16524384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 5300696 - 5300748
Alignment:
Q  31 ttatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaatttt 83  Q
    |||| |||||||||||||  ||| ||||||||||||| |||| ||||||||||    
T  5300696 ttattgagaaaataaaaaaaagagcaaattgaatgcactttgtatttaatttt 5300748  T

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Target: scaffold0495 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 4705 - 4609
Alignment:
Q  10 ataattctcattggttaaaaattatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgatttgtttg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  ||||||||||||||||    
T  4705 ataattctcattggttaaaaattatggagaaaataaaaaggagaacacattgaatgcaatttgcatttaattttatattg-gaaagatgatttgtttg 4609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 3227 - 3155
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatgattt 102  Q
    ||||| |||||||| |||| || ||||||||||||||| ||||||| ||||||| | ||| ||||||| ||||    
T  3227 attatagagaaaatgaaaaagaaaacaaattgaatgcactttgcatataattttgctttggaaaagataattt 3155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 5977 - 6045
Alignment:
Q  30 attatggagaaaataaaaaggagaacaaattgaatgcaatttgcatttaattttacattgaaaaagatg 98  Q
    ||||| || ||||| |||| ||||  |||||||||||| |||||||||||||||   ||||||||||||    
T  5977 attatagaaaaaatgaaaaagagagtaaattgaatgcactttgcatttaattttcttttgaaaaagatg 6045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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