View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1767_high_12 (Length: 288)
Name: NF1767_high_12
Description: NF1767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1767_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 18 - 279
Target Start/End: Original strand, 6488570 - 6488831
Alignment:
| Q |
18 |
agatccagaatatataactagttaaatcgagaaatgcatagctagcttggaaggtaaacgtcttcactttctaatatcacatttagcaaaaggtaacttt |
117 |
Q |
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| T |
6488570 |
agattcagaatatataactagttaaatcgagaaatgcatagctagcttggaaggtaaacgtcttcactttctaatatcacatttagcaaaaggtaacttt |
6488669 |
T |
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| Q |
118 |
cttttactccattgtggtttgcctcaaaatatatagttttcaatattaaagtaaaagataagatatcattatttcctatgatcttgctagagagctggcc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6488670 |
cttttactccattgtggtttgcctcaaaatatatagttttcaatattaaagtaaaagataagatatcattatttcctatgatcttgctagagagctggcc |
6488769 |
T |
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| Q |
218 |
ataaatggccggtgatctcatcaacagcaacctatatagtgataattgaggttgagtattat |
279 |
Q |
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| T |
6488770 |
ataaatggccggtgatctcatcaacagcaacctatatagtgataattgaggtagagtgttat |
6488831 |
T |
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