View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1767_high_15 (Length: 253)

Name: NF1767_high_15
Description: NF1767
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1767_high_15
NF1767_high_15
[»] chr1 (50 HSPs)
chr1 (83-253)||(46432342-46432520)
chr1 (76-253)||(24196254-24196439)
chr1 (75-253)||(24961945-24962131)
chr1 (83-253)||(43706780-43706957)
chr1 (82-253)||(3616798-3616977)
chr1 (81-247)||(4059654-4059828)
chr1 (167-253)||(19078051-19078137)
chr1 (167-253)||(19125941-19126027)
chr1 (81-253)||(51719248-51719426)
chr1 (83-251)||(2425225-2425400)
chr1 (91-247)||(24749805-24749970)
chr1 (81-252)||(28920784-28920957)
chr1 (83-247)||(48471995-48472165)
chr1 (81-251)||(2657640-2657817)
chr1 (167-253)||(27092978-27093064)
chr1 (79-253)||(29676075-29676257)
chr1 (168-250)||(47685194-47685276)
chr1 (170-247)||(4455174-4455252)
chr1 (180-252)||(31084739-31084811)
chr1 (167-247)||(16551775-16551856)
chr1 (80-249)||(9387692-9387868)
chr1 (169-247)||(29182132-29182210)
chr1 (169-253)||(2260504-2260589)
chr1 (167-251)||(18606811-18606896)
chr1 (167-208)||(21148070-21148111)
chr1 (167-253)||(16971942-16972029)
chr1 (80-136)||(35067050-35067106)
chr1 (84-136)||(50334719-50334771)
chr1 (81-136)||(16972101-16972156)
chr1 (81-140)||(27092851-27092910)
chr1 (82-136)||(4059521-4059575)
chr1 (82-132)||(31084615-31084665)
chr1 (167-246)||(10684884-10684965)
chr1 (170-246)||(28750372-28750448)
chr1 (93-140)||(28552315-28552363)
chr1 (84-136)||(43706655-43706707)
chr1 (80-136)||(46432213-46432269)
chr1 (81-136)||(2425474-2425529)
chr1 (85-140)||(10685008-10685063)
chr1 (82-137)||(24750019-24750074)
chr1 (83-239)||(22786031-22786194)
chr1 (82-136)||(24196512-24196566)
chr1 (83-132)||(2260378-2260427)
chr1 (83-136)||(2657513-2657566)
chr1 (83-136)||(3617049-3617102)
chr1 (167-251)||(21185297-21185380)
chr1 (167-248)||(26605408-26605487)
chr1 (84-136)||(16551645-16551697)
chr1 (85-140)||(16878931-16878987)
chr1 (84-136)||(48471864-48471916)
[»] chr6 (42 HSPs)
chr6 (81-251)||(22968283-22968459)
chr6 (81-251)||(23819934-23820110)
chr6 (81-253)||(8412756-8412936)
chr6 (73-253)||(32451716-32451904)
chr6 (83-253)||(24603361-24603539)
chr6 (83-253)||(26710433-26710611)
chr6 (80-253)||(4597531-4597712)
chr6 (81-253)||(18791356-18791535)
chr6 (81-253)||(34833923-34834103)
chr6 (167-253)||(3118771-3118857)
chr6 (81-250)||(24051007-24051183)
chr6 (82-246)||(31210793-31210965)
chr6 (167-253)||(25819776-25819862)
chr6 (167-253)||(35102617-35102703)
chr6 (167-247)||(15298577-15298657)
chr6 (84-253)||(4013792-4013968)
chr6 (81-247)||(14572310-14572482)
chr6 (83-253)||(22269410-22269584)
chr6 (170-253)||(19282337-19282420)
chr6 (167-238)||(32682419-32682490)
chr6 (167-253)||(18749222-18749308)
chr6 (83-210)||(18749297-18749432)
chr6 (167-251)||(24615822-24615905)
chr6 (179-249)||(12291547-12291618)
chr6 (168-253)||(26240048-26240135)
chr6 (167-242)||(4370990-4371065)
chr6 (167-247)||(9241745-9241824)
chr6 (187-252)||(2636888-2636954)
chr6 (167-251)||(12427323-12427409)
chr6 (167-251)||(16415458-16415543)
chr6 (80-136)||(18749094-18749150)
chr6 (211-253)||(23124846-23124888)
chr6 (167-208)||(2058993-2059034)
chr6 (180-247)||(34528252-34528320)
chr6 (78-140)||(4597400-4597463)
chr6 (81-136)||(35102489-35102544)
chr6 (211-253)||(20863854-20863896)
chr6 (73-131)||(34834180-34834238)
chr6 (82-136)||(35102714-35102768)
chr6 (75-136)||(3118928-3118989)
chr6 (75-136)||(7316342-7316403)
chr6 (96-137)||(12291430-12291471)
[»] scaffold0062 (2 HSPs)
scaffold0062 (81-253)||(49657-49837)
scaffold0062 (81-253)||(62196-62376)
[»] chr2 (35 HSPs)
chr2 (81-253)||(15700745-15700925)
chr2 (81-253)||(4587858-4588039)
chr2 (79-253)||(15735060-15735242)
chr2 (73-253)||(30714400-30714588)
chr2 (86-253)||(2986689-2986864)
chr2 (82-253)||(11175906-11176085)
chr2 (75-247)||(9051159-9051339)
chr2 (81-253)||(18537954-18538134)
chr2 (82-245)||(6763851-6764022)
chr2 (80-253)||(25298927-25299107)
chr2 (74-251)||(22191037-22191222)
chr2 (167-253)||(38716285-38716371)
chr2 (167-253)||(9787651-9787737)
chr2 (173-253)||(17368314-17368394)
chr2 (167-253)||(331804-331891)
chr2 (96-243)||(36464289-36464441)
chr2 (169-252)||(22387195-22387278)
chr2 (167-251)||(2190624-2190709)
chr2 (167-251)||(28365602-28365686)
chr2 (168-244)||(1020483-1020559)
chr2 (168-252)||(26829216-26829300)
chr2 (167-253)||(4104950-4105036)
chr2 (180-251)||(21494555-21494626)
chr2 (81-136)||(25884176-25884231)
chr2 (169-246)||(25884310-25884388)
chr2 (74-136)||(36449769-36449831)
chr2 (77-131)||(36464527-36464581)
chr2 (82-140)||(43301656-43301714)
chr2 (169-249)||(2123468-2123549)
chr2 (83-136)||(9787808-9787861)
chr2 (83-140)||(17368461-17368518)
chr2 (81-136)||(30714273-30714328)
chr2 (198-246)||(15147835-15147884)
chr2 (83-132)||(15735318-15735367)
chr2 (80-140)||(1020594-1020654)
[»] chr7 (75 HSPs)
chr7 (73-253)||(48176089-48176276)
chr7 (80-249)||(18754396-18754573)
chr7 (81-253)||(20636617-20636797)
chr7 (73-253)||(27869321-27869509)
chr7 (81-247)||(20638489-20638663)
chr7 (82-253)||(31493910-31494088)
chr7 (80-247)||(21224484-21224659)
chr7 (74-253)||(24597641-24597828)
chr7 (81-246)||(19919736-19919907)
chr7 (167-253)||(35337648-35337734)
chr7 (81-253)||(3562559-3562738)
chr7 (81-253)||(11843304-11843483)
chr7 (83-247)||(42271333-42271504)
chr7 (84-247)||(2331015-2331185)
chr7 (80-253)||(13577912-13578091)
chr7 (83-253)||(19195339-19195517)
chr7 (167-253)||(41452375-41452461)
chr7 (82-253)||(14624607-14624780)
chr7 (167-249)||(44078000-44078083)
chr7 (167-253)||(10023910-10023996)
chr7 (170-252)||(17305859-17305941)
chr7 (167-253)||(36746629-36746715)
chr7 (166-253)||(24448169-24448257)
chr7 (167-250)||(21225677-21225759)
chr7 (167-247)||(24464667-24464748)
chr7 (167-251)||(10655422-10655505)
chr7 (167-253)||(4571469-4571556)
chr7 (167-253)||(26126346-26126432)
chr7 (81-253)||(8526794-8526973)
chr7 (172-253)||(39440246-39440328)
chr7 (170-250)||(3403180-3403261)
chr7 (167-247)||(15681721-15681802)
chr7 (170-253)||(5111534-5111617)
chr7 (167-219)||(6798074-6798126)
chr7 (84-251)||(25002712-25002883)
chr7 (183-253)||(9822225-9822296)
chr7 (183-253)||(10724150-10724221)
chr7 (167-247)||(39182027-39182106)
chr7 (167-253)||(4193642-4193728)
chr7 (82-137)||(6650543-6650598)
chr7 (169-253)||(3769498-3769583)
chr7 (170-246)||(9157183-9157259)
chr7 (167-208)||(15681689-15681730)
chr7 (167-247)||(26385353-26385433)
chr7 (73-136)||(8527045-8527108)
chr7 (83-130)||(23080818-23080865)
chr7 (177-251)||(43251366-43251441)
chr7 (74-136)||(20636869-20636931)
chr7 (168-253)||(23439686-23439772)
chr7 (167-247)||(6798014-6798094)
chr7 (80-137)||(21690413-21690470)
chr7 (198-253)||(5087118-5087174)
chr7 (79-131)||(24448041-24448093)
chr7 (170-246)||(29051714-29051789)
chr7 (171-250)||(33237542-33237622)
chr7 (82-133)||(11843177-11843228)
chr7 (83-134)||(15681883-15681934)
chr7 (73-140)||(23658764-23658831)
chr7 (82-137)||(25002955-25003010)
chr7 (81-136)||(26385512-26385567)
chr7 (83-137)||(10655330-10655384)
chr7 (83-140)||(17305764-17305822)
chr7 (168-237)||(19493412-19493481)
chr7 (168-253)||(23461147-23461233)
chr7 (82-136)||(27869195-27869249)
chr7 (82-136)||(39182184-39182238)
chr7 (74-132)||(42303401-42303459)
chr7 (82-135)||(14624852-14624905)
chr7 (167-246)||(3148015-3148095)
chr7 (82-134)||(5111441-5111493)
chr7 (198-253)||(6650632-6650688)
chr7 (80-136)||(19493567-19493623)
chr7 (80-140)||(21810087-21810147)
chr7 (81-140)||(26385261-26385321)
chr7 (81-136)||(48175960-48176016)
[»] chr4 (48 HSPs)
chr4 (83-253)||(4433309-4433485)
chr4 (83-253)||(25011735-25011913)
chr4 (82-253)||(13397801-13397980)
chr4 (81-253)||(35475289-35475467)
chr4 (80-253)||(43793757-43793937)
chr4 (81-253)||(55780385-55780564)
chr4 (81-253)||(55844565-55844744)
chr4 (81-253)||(9195790-9195968)
chr4 (81-253)||(41877154-41877330)
chr4 (80-246)||(1588546-1588719)
chr4 (83-247)||(4357252-4357424)
chr4 (82-247)||(6789090-6789263)
chr4 (81-247)||(5304479-5304651)
chr4 (83-253)||(19232469-19232648)
chr4 (167-246)||(13826552-13826631)
chr4 (167-246)||(15058951-15059030)
chr4 (167-253)||(27018306-27018392)
chr4 (81-246)||(41034633-41034807)
chr4 (81-251)||(45633436-45633613)
chr4 (83-247)||(52838231-52838399)
chr4 (167-247)||(2715849-2715928)
chr4 (166-245)||(4098747-4098827)
chr4 (167-253)||(51291295-51291382)
chr4 (72-244)||(2931310-2931490)
chr4 (79-251)||(24626348-24626524)
chr4 (167-250)||(9397283-9397367)
chr4 (170-251)||(15795412-15795493)
chr4 (167-253)||(23362523-23362609)
chr4 (77-136)||(18259362-18259421)
chr4 (11-82)||(48908441-48908520)
chr4 (81-137)||(4433181-4433237)
chr4 (80-132)||(20919332-20919384)
chr4 (81-253)||(15734398-15734576)
chr4 (83-130)||(17138540-17138587)
chr4 (81-136)||(43793629-43793684)
chr4 (82-140)||(15058819-15058877)
chr4 (82-140)||(24626221-24626279)
chr4 (167-208)||(48158688-48158729)
chr4 (170-227)||(55264967-55265024)
chr4 (71-189)||(25618786-25618912)
chr4 (78-136)||(8749051-8749109)
chr4 (82-136)||(25011985-25012039)
chr4 (83-136)||(9397440-9397493)
chr4 (167-208)||(16291885-16291926)
chr4 (167-244)||(43336075-43336152)
chr4 (83-136)||(45633687-45633740)
chr4 (87-131)||(14857598-14857642)
chr4 (96-132)||(15795570-15795606)
[»] chr3 (64 HSPs)
chr3 (77-253)||(27852877-27853061)
chr3 (86-253)||(23428745-23428920)
chr3 (81-253)||(26628151-26628331)
chr3 (83-253)||(13080894-13081072)
chr3 (167-253)||(28173855-28173941)
chr3 (83-253)||(3328939-3329117)
chr3 (82-253)||(48907418-48907596)
chr3 (80-253)||(25179575-25179756)
chr3 (82-253)||(10743408-10743585)
chr3 (167-253)||(30155271-30155357)
chr3 (82-253)||(8542609-8542788)
chr3 (87-253)||(25022789-25022960)
chr3 (82-253)||(3780882-3781056)
chr3 (83-253)||(46673173-46673350)
chr3 (81-246)||(4521952-4522125)
chr3 (83-247)||(8339072-8339244)
chr3 (167-253)||(26633485-26633570)
chr3 (167-253)||(48860794-48860880)
chr3 (167-247)||(28155014-28155094)
chr3 (81-253)||(22447866-22448050)
chr3 (81-253)||(40836304-40836484)
chr3 (170-247)||(22500727-22500804)
chr3 (167-247)||(34878661-34878741)
chr3 (86-253)||(20001714-20001887)
chr3 (167-247)||(26127038-26127118)
chr3 (167-247)||(26177088-26177168)
chr3 (198-253)||(6927593-6927648)
chr3 (167-253)||(22416425-22416512)
chr3 (81-245)||(36311150-36311321)
chr3 (167-251)||(9496344-9496429)
chr3 (76-246)||(25336351-25336527)
chr3 (81-251)||(33279713-33279890)
chr3 (71-140)||(32960633-32960702)
chr3 (198-247)||(32960774-32960823)
chr3 (198-253)||(3821004-3821060)
chr3 (81-136)||(22447738-22447793)
chr3 (78-137)||(25179825-25179884)
chr3 (81-136)||(26628023-26628078)
chr3 (81-136)||(34878527-34878582)
chr3 (170-243)||(1743344-1743417)
chr3 (82-136)||(20001959-20002012)
chr3 (75-136)||(3328805-3328866)
chr3 (167-247)||(4775942-4776023)
chr3 (81-210)||(18388869-18389005)
chr3 (79-136)||(22500592-22500649)
chr3 (83-136)||(28154882-28154935)
chr3 (167-243)||(32315011-32315088)
chr3 (73-166)||(32960830-32960920)
chr3 (81-140)||(1743495-1743555)
chr3 (168-208)||(46387745-46387785)
chr3 (81-136)||(28173727-28173782)
chr3 (85-140)||(32315164-32315219)
chr3 (166-243)||(35201131-35201207)
chr3 (82-136)||(1743254-1743308)
chr3 (83-137)||(20626751-20626805)
chr3 (82-136)||(26633360-26633413)
chr3 (83-136)||(8338940-8338993)
chr3 (167-227)||(34296531-34296592)
chr3 (167-208)||(49657952-49657992)
chr3 (80-136)||(19984846-19984902)
chr3 (81-137)||(19986119-19986175)
chr3 (80-136)||(25022661-25022717)
chr3 (82-130)||(33279585-33279633)
chr3 (84-132)||(40836181-40836229)
[»] chr5 (51 HSPs)
chr5 (81-253)||(25557001-25557180)
chr5 (81-251)||(38408627-38408804)
chr5 (83-253)||(40428765-40428941)
chr5 (80-253)||(36641140-36641321)
chr5 (167-253)||(16901123-16901209)
chr5 (83-253)||(18695004-18695181)
chr5 (167-253)||(31055440-31055526)
chr5 (81-253)||(245594-245772)
chr5 (170-253)||(10379377-10379459)
chr5 (77-253)||(16307602-16307787)
chr5 (166-250)||(10293216-10293300)
chr5 (82-247)||(26639169-26639342)
chr5 (167-251)||(38476597-38476682)
chr5 (167-247)||(23765522-23765602)
chr5 (167-247)||(23815370-23815450)
chr5 (167-251)||(7187281-7187365)
chr5 (167-251)||(23040076-23040163)
chr5 (167-253)||(17825623-17825709)
chr5 (170-247)||(19169438-19169515)
chr5 (168-247)||(15885297-15885375)
chr5 (167-253)||(41663649-41663736)
chr5 (167-251)||(34125151-34125236)
chr5 (167-247)||(7835802-7835881)
chr5 (83-253)||(35302040-35302217)
chr5 (170-253)||(17704713-17704795)
chr5 (82-213)||(8645796-8645935)
chr5 (86-253)||(37961374-37961549)
chr5 (73-136)||(31648046-31648109)
chr5 (195-250)||(462885-462941)
chr5 (170-253)||(2373240-2373323)
chr5 (80-136)||(18695253-18695309)
chr5 (81-137)||(23765418-23765474)
chr5 (81-137)||(23815266-23815322)
chr5 (82-136)||(17704833-17704887)
chr5 (76-208)||(23040210-23040347)
chr5 (82-136)||(24025020-24025074)
chr5 (81-134)||(20654047-20654100)
chr5 (81-134)||(31648237-31648290)
chr5 (74-134)||(2373398-2373458)
chr5 (81-133)||(7835962-7836014)
chr5 (85-140)||(7835722-7835777)
chr5 (93-140)||(8645996-8646043)
chr5 (81-136)||(31055313-31055368)
chr5 (75-137)||(3597315-3597377)
chr5 (82-136)||(16900996-16901050)
chr5 (167-208)||(20653912-20653952)
chr5 (83-132)||(31576493-31576542)
chr5 (88-136)||(17704592-17704640)
chr5 (81-140)||(23765635-23765695)
chr5 (81-140)||(23815483-23815543)
chr5 (93-140)||(40428649-40428697)
[»] scaffold0179 (2 HSPs)
scaffold0179 (82-247)||(5781-5954)
scaffold0179 (80-134)||(5647-5701)
[»] chr8 (41 HSPs)
chr8 (83-247)||(30784396-30784568)
chr8 (82-253)||(4518993-4519172)
chr8 (82-252)||(17648242-17648420)
chr8 (87-247)||(12723393-12723561)
chr8 (75-253)||(38630047-38630233)
chr8 (167-253)||(19391513-19391599)
chr8 (74-253)||(8802526-8802712)
chr8 (83-253)||(19924265-19924443)
chr8 (73-253)||(44146962-44147148)
chr8 (86-253)||(5192397-5192572)
chr8 (81-253)||(4807726-4807907)
chr8 (81-242)||(22452310-22452479)
chr8 (167-247)||(33895466-33895546)
chr8 (83-253)||(21666400-21666577)
chr8 (169-253)||(32400448-32400532)
chr8 (71-247)||(7117246-7117429)
chr8 (167-251)||(3208072-3208156)
chr8 (81-215)||(21929967-21930107)
chr8 (167-253)||(18881629-18881716)
chr8 (170-240)||(3380293-3380363)
chr8 (81-136)||(19392817-19392872)
chr8 (169-251)||(41688238-41688321)
chr8 (170-247)||(41385622-41385700)
chr8 (168-251)||(4423157-4423242)
chr8 (167-247)||(18253018-18253098)
chr8 (200-247)||(23565214-23565261)
chr8 (81-136)||(44147221-44147276)
chr8 (82-136)||(5192271-5192325)
chr8 (79-136)||(4807596-4807653)
chr8 (73-133)||(7116393-7116453)
chr8 (81-140)||(15869580-15869639)
chr8 (81-136)||(18881502-18881557)
chr8 (78-140)||(19391383-19391445)
chr8 (81-136)||(23565119-23565174)
chr8 (83-133)||(3380199-3380249)
chr8 (102-140)||(3819507-3819545)
chr8 (167-248)||(31268371-31268451)
chr8 (167-208)||(1824697-1824737)
chr8 (167-208)||(1859142-1859182)
chr8 (79-136)||(10007811-10007868)
chr8 (82-130)||(21666273-21666321)
[»] scaffold1202 (1 HSPs)
scaffold1202 (81-251)||(1902-2079)
[»] scaffold0025 (3 HSPs)
scaffold0025 (82-253)||(61813-61992)
scaffold0025 (83-253)||(19285-19460)
scaffold0025 (83-136)||(19532-19585)
[»] scaffold0406 (1 HSPs)
scaffold0406 (83-246)||(1997-2162)
[»] scaffold0267 (1 HSPs)
scaffold0267 (85-246)||(3701-3866)
[»] scaffold0607 (2 HSPs)
scaffold0607 (79-253)||(2175-2355)
scaffold0607 (82-136)||(2047-2101)
[»] scaffold0419 (2 HSPs)
scaffold0419 (83-247)||(3092-3264)
scaffold0419 (83-136)||(2961-3014)
[»] scaffold0060 (2 HSPs)
scaffold0060 (167-253)||(66266-66352)
scaffold0060 (82-140)||(66420-66478)
[»] scaffold0001 (1 HSPs)
scaffold0001 (81-247)||(142079-142252)
[»] scaffold0087 (1 HSPs)
scaffold0087 (167-253)||(25090-25176)
[»] scaffold0150 (1 HSPs)
scaffold0150 (167-250)||(5923-6007)
[»] scaffold0002 (3 HSPs)
scaffold0002 (170-251)||(455121-455203)
scaffold0002 (167-252)||(455022-455108)
scaffold0002 (84-136)||(455279-455331)
[»] scaffold1875 (2 HSPs)
scaffold1875 (167-253)||(882-969)
scaffold1875 (81-136)||(754-809)
[»] scaffold0007 (1 HSPs)
scaffold0007 (194-253)||(250644-250703)
[»] scaffold0174 (2 HSPs)
scaffold0174 (167-247)||(29808-29888)
scaffold0174 (83-137)||(29937-29991)
[»] scaffold0103 (1 HSPs)
scaffold0103 (187-252)||(3055-3121)
[»] scaffold0014 (1 HSPs)
scaffold0014 (167-247)||(112218-112299)
[»] scaffold0291 (1 HSPs)
scaffold0291 (167-246)||(10013-10092)
[»] scaffold0683 (1 HSPs)
scaffold0683 (81-136)||(5288-5343)
[»] scaffold0024 (1 HSPs)
scaffold0024 (74-136)||(43815-43877)
[»] scaffold0171 (1 HSPs)
scaffold0171 (211-252)||(9168-9209)
[»] scaffold0064 (1 HSPs)
scaffold0064 (198-253)||(54492-54548)


Alignment Details
Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 46432520 - 46432342
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaata 174  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||        ||||||||||||||||||       ||||||||    
T  46432520 ggctaaagtccacttttcgccccttaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaata 46432421  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  46432420 tgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgacccct 46432342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 76 - 253
Target Start/End: Original strand, 24196254 - 24196439
Alignment:
Q  76 aaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggccc-ctattnnnnnnnntggcaaaagtgaccccct-------g 167  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||        |||||||||||||||| |       |    
T  24196254 aaatataggctaaactccacttttcgccccctaagtttcaaaatgttgcgattttggccctctattaaaaaaaatggcaaaagtgaccccatatgtttag 24196353  T
Q  168 ggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
     ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||| |||| |||||    
T  24196354 agaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgaatatggcccct 24196439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 75 - 253
Target Start/End: Original strand, 24961945 - 24962131
Alignment:
Q  75 aaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct------- 166  Q
    |||| |||||||||||| ||||||||||||  ||||||||||||| ||| |||||||||||| ||||        ||||||||||||||||||           
T  24961945 aaaaaataggctaaacttcacttttcgccctctaagtttcaaaatgttgtgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgttta 24962044  T
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||||    
T  24962045 gggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccct 24962131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 43706957 - 43706780
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaata 174  Q
    ||||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| ||||        ||||||||||||||||||       ||||||||    
T  43706957 ggctaaactccactttttgccccctaatttttaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaata 43706858  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  43706857 tgctcttttgaccca-taacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgacccct 43706780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 82 - 253
Target Start/End: Original strand, 3616798 - 3616977
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    |||||||||| ||||||||||||  ||||||||||||| |||||||||||||||| ||||        |||||||||||||| |||       |||||||    
T  3616798 aggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgacctcctatgtttagggaaat 3616897  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||| | | ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  3616898 atgctcttttgacctcttcacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatggcccct 3616977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 4059828 - 4059654
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||||| ||||||||||||  ||||||||||||| |||||||||| ||||| ||||        ||||||||||||||| ||       ||||||    
T  4059828 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttagccccctattaaaaaaaatggcaaaagtgaccctctatgtttagggaaa 4059729  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||    
T  4059728 tatgctcttttgacctcctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 4059654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 19078137 - 19078051
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  19078137 gggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgacccct 19078051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 19126027 - 19125941
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  19126027 gggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgacccct 19125941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 253
Target Start/End: Complemental strand, 51719426 - 51719248
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggc-ccctattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||||||||||||| | | | ||||||||||||| ||||||||||||| |||||||        |||||||||||||||| |       ||||||    
T  51719426 taggctaaactccactttttgtcacctaagtttcaaaatgttgcgattttggctccctattaaaaaaa-tggcaaaagtgaccccttatgtttagggaaa 51719328  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||| |||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||||||||||||||    
T  51719327 tatgctcttttgatcccctaacataaggaaaatatgtttttt-accccttatctttacaaaaagttgcgattatgacccct 51719248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 83 - 251
Target Start/End: Original strand, 2425225 - 2425400
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccc-----tgggaaatatg 176  Q
    ||||||||||||||||| ||| | ||||||||||||| ||||||||||| |||| ||||        ||||||||||||||||      | || ||||||    
T  2425225 ggctaaactccactttttgccacctaagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgacccctatgtttagggaatatg 2425324  T
Q  177 ctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    |||||||||||| ||||||||||||||||||| |||||| | || ||||||| |||||||||||||||||||||||    
T  2425325 ctcttttgaccctctaacataagggaaatatgttttttttaacccttatctttacaaaaagttgcgattatgaccc 2425400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 91 - 247
Target Start/End: Original strand, 24749805 - 24749970
Alignment:
Q  91 tccacttttcgccccttaagtttcaaaattttgcgattttggccc-ctattnnnnnnnn-tggcaaaagtgaccccct-------gggaaatatgctctt 181  Q
    ||||||||||| ||  ||||||||||||| ||||||||||||||| |||||         ||||||||||||||||||       |||||||||||||||    
T  24749805 tccacttttcgtcctctaagtttcaaaatgttgcgattttggcccactattaaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgctctt 24749904  T
Q  182 ttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||| | |||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  24749905 ttgacctcataacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 24749970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 252
Target Start/End: Complemental strand, 28920957 - 28920784
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||||| ||||||||||||| ||||||||||||| |||||||||||| ||||||||        ||||||||||||||||||       ||||||    
T  28920957 taggctaaacttcacttttcgccccctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaa 28920858  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccc 252  Q
    ||||||||||||||| ||||||||      |||||| |||||||||| ||||||| ||||||||| ||||||||| ||||    
T  28920857 tatgctcttttgacctcctaacat------aatatgctttttgaccccttatctttacaaaaagtggcgattatggcccc 28920784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 83 - 247
Target Start/End: Complemental strand, 48472165 - 48471995
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaatat 175  Q
    ||||||||  ||||||||||||  ||||||||||||| |||| ||||| |||| ||||        |||||||| |||||||||       |||||||||    
T  48472165 ggctaaacatcacttttcgccctctaagtttcaaaatattgcaattttagccc-tattaaaaaaaatggcaaaattgaccccctatgtttagggaaatat 48472067  T
Q  176 gctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||||| ||||||||||| |||||||| |||||||||| ||||||| |||||||||||||||||||    
T  48472066 gctcttttgacctcctaacataagagaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 48471995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 2657817 - 2657640
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||||||||| ||||||||        ||||||||||||| ||||       |||||||    
T  2657817 taggctaaactacacttttcgccccctaagtttcaaaatattgcgattttgacccctattaaaaaaaatggcaaaagtgactccctatgtttagggaaat 2657718  T
Q  174 atgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    ||||||| |||||| |||||||||| ||||||||| | ||||||||| |||||||   ||||||||| |||||||||||    
T  2657717 atgctctattgaccgcctaacataa-ggaaatatgctcttttgaccccttatcttttaaaaaagttgtgattatgaccc 2657640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 27093064 - 27092978
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||||||| ||| | ||||||||||||||||||| ||||||| |||||||||||| |||||| |||||    
T  27093064 gggaaatatgctcttttgaccccctaatatatgtgaaatatgttttttgaccccttatctttacaaaaagttgcaattatggcccct 27092978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 79 - 253
Target Start/End: Original strand, 29676075 - 29676257
Alignment:
Q  79 tataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------ggga 170  Q
    ||||||||||||| ||||||||||||  ||||||||||||| |||| |||| |||||| ||||        | |||||||||| |||||       ||||    
T  29676075 tataggctaaacttcacttttcgccctctaagtttcaaaatgttgcaatttaggccccatattaaaaagaatagcaaaagtgatcccctatgtttaggga 29676174  T
Q  171 aatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||| ||| | ||||||||||| |||||||| |||||||||| ||||||| | ||||||||||||||||| |||||    
T  29676175 aatatgctcttgtgatctcctaacataagtgaaatatgctttttgaccccttatctttataaaaagttgcgattatggcccct 29676257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 250
Target Start/End: Original strand, 47685194 - 47685276
Alignment:
Q  168 ggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacc 250  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||||||||| ||| ||| ||||||||||||||| ||||||    
T  47685194 ggaaatatgctattttgatcccctaacataaggaaaatatgttttttgaccccttacctttacaaaaagttgcgataatgacc 47685276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 4455252 - 4455174
Alignment:
Q  170 aaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||||||||||||| |||||||||||||||||| ||||||||||  |||||||  ||||||||||||||||||    
T  4455252 aaatatgctcttttgaccccgtaacataagggaaatatgattttttgaccacttatcttctcaaaaagttgcgattatg 4455174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 31084811 - 31084739
Alignment:
Q  180 ttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccc 252  Q
    |||||||||||||||||| || ||||||| |||||||||| ||||||| |||||||||| |||||||||||||    
T  31084811 ttttgaccccctaacatatggaaaatatgctttttgaccccttatctttacaaaaagtttcgattatgacccc 31084739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 16551856 - 16551775
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||||||||||||||||||||||| ||  ||||||| | ||||||||| |||||||  ||||||||||||||||||    
T  16551856 gggaaatatgctcttttgaccccctaacatcagacaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatg 16551775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 249
Target Start/End: Original strand, 9387692 - 9387868
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccc-tg-----ggaaat 173  Q
    |||||||||||| ||||||| |||   ||||||||||||| || ||||||| |||||||||        |||||||||| |||||| ||     ||||||    
T  9387692 ataggctaaactgcactttttgccttctaagtttcaaaatattacgattttcgcccctattaaaaaaa-tggcaaaagtaacccccatgtttaaggaaat 9387790  T
Q  174 atgctcttttga-ccccctaacataagggaaatat-gttttttgacccgttatcttaacaaaaagttgcgattatgac 249  Q
    |||||||||||| ||||||||||||||||||||||  | ||||||||| |||||||  |||||| |||||||||||||    
T  9387791 atgctcttttgacccccctaacataagggaaatataatcttttgaccctttatcttctcaaaaatttgcgattatgac 9387868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 247
Target Start/End: Complemental strand, 29182210 - 29182132
Alignment:
Q  169 gaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||||||  || |||||||||||||||    
T  29182210 gaaatatgctcttttgacccc-taacataagggaaatatgatcttttgaccccttatcttctcataaagttgcgattatg 29182132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 2260589 - 2260504
Alignment:
Q  169 gaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||| |||||||||| ||| |||||||||||||| | |||| |||| |||||||  ||||||||||||||| ||||||||    
T  2260589 gaaatatgcttttttgaccccataatataagggaaatatgatattttaaccccttatcttctcaaaaagttgcgattctgacccct 2260504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 18606896 - 18606811
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    ||||||||||||||||||||||| |||||||||| ||||| | | ||||||||| |||||||  |||||||||| |||||| ||||    
T  18606896 gggaaatatgctcttttgaccccataacataaggaaaatacgatcttttgaccccttatcttctcaaaaagttgtgattatcaccc 18606811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 21148070 - 21148111
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  21148070 gggaaatatgctcttttgaccccctaacataagggaaatatg 21148111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 16971942 - 16972029
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||| ||||||||||| |||||||||||||||||||||||||   ||||||| | |||||||  |||||  |||||||||||||||||    
T  16971942 gggatatatgctctttagaccccctaacataagggaaatatgaccttttgactctttatcttctcaaaatattgcgattatgacccct 16972029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 35067106 - 35067050
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||| | |||||||| |||||||||||||||||  ||||||||||||||||    
T  35067106 ataggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggcccc 35067050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 50334719 - 50334771
Alignment:
Q  84 gctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||||||||||||||| ||||||| ||||| |||| |||||||||||    
T  50334719 gctaaactccacttttcgccccctaagttttaaaatgttgcaattttggcccc 50334771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 16972156 - 16972101
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||||| ||||||||||||| ||||||| ||||| |||||||||| |||||    
T  16972156 taggctaaactgcacttttcgccccctaagttttaaaatgttgcgattttagcccc 16972101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 27092851 - 27092910
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctatt 140  Q
    ||||||||||| ||||| ||||||| || |||||||||| || |||||||||||||||||    
T  27092851 taggctaaactgcacttctcgccccctatgtttcaaaatgttacgattttggcccctatt 27092910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 4059521 - 4059575
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||| | ||||||||||||| || |||||||||| ||||||||||||||||    
T  4059521 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggcccc 4059575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 31084615 - 31084665
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg 132  Q
    |||||||||| ||||||||||| ||||||||| ||||| ||||||||||||    
T  31084615 aggctaaactacacttttcgcctcttaagttttaaaatattgcgattttgg 31084665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 10684884 - 10684965
Alignment:
Q  167 gggaaatatgctcttttgaccccc-taacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattat 246  Q
    ||||||||| |||| ||||||||| |||||||||  ||||||| | ||||||||| |||||||  |||||||||||||||||    
T  10684884 gggaaatatactctattgacccccctaacataagaaaaatatgatcttttgaccccttatcttctcaaaaagttgcgattat 10684965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 28750372 - 28750448
Alignment:
Q  170 aaatatgctcttttgaccccctaacataa-gggaaatatgttttttgacccgttatcttaacaaaaagttgcgattat 246  Q
    ||||||||||||||||||| ||||||||| |||||| |||||||||| ||  ||||||| |  |||||||||||||||    
T  28750372 aaatatgctcttttgaccctctaacataaggggaaaaatgttttttggcctcttatcttta-taaaagttgcgattat 28750448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 140
Target Start/End: Original strand, 28552315 - 28552363
Alignment:
Q  93 cacttttcgccccttaagtttcaaaattttgcgattttgg-cccctatt 140  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||||||    
T  28552315 cacttttcgccccctaagtttcaaaatgttgcgattttggtcccctatt 28552363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 43706655 - 43706707
Alignment:
Q  84 gctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||| ||||||||||||| || |||||| ||| ||||||||||||||||    
T  43706655 gctaaactgcacttttcgccccctatgtttcataatgttgcgattttggcccc 43706707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 46432213 - 46432269
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||| | ||||||||||||| || |||||| ||| ||||||||||||||||    
T  46432213 ataggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggcccc 46432269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 2425529 - 2425474
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||||| ||||||| ||||| || |||||| ||| ||||||||||||||||    
T  2425529 taggctaaactgcactttttgccccctatgtttcataatgttgcgattttggcccc 2425474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 140
Target Start/End: Complemental strand, 10685063 - 10685008
Alignment:
Q  85 ctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctatt 140  Q
    ||||||| || |||||||||| ||||||||||||| |||  |||||||||||||||    
T  10685063 ctaaactgcatttttcgccccctaagtttcaaaatattgtaattttggcccctatt 10685008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 24750074 - 24750019
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccct 137  Q
    |||||||||| ||||||||||||| || |||| ||||| |||| ||||||||||||    
T  24750074 aggctaaactgcacttttcgccccctatgttttaaaatgttgcaattttggcccct 24750019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 239
Target Start/End: Original strand, 22786031 - 22786194
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaatat 175  Q
    ||||||||| ||| ||| ||| | ||||||| ||||| ||||||||||| ||||||||        |||||||||||| ||||        |||||||||    
T  22786031 ggctaaactgcaccttttgcctcctaagttttaaaatgttgcgattttgacccctattaaaaaaaatggcaaaagtgagcccccatgtttagggaaatat 22786130  T
Q  176 gctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttg 239  Q
    |||||||||| |  |||||||||| |||||||| | ||||||||| |||||||  ||||||||||    
T  22786131 gctcttttga-catctaacataagtgaaatatgatcttttgaccccttatcttctcaaaaagttg 22786194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 24196566 - 24196512
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||| ||||||||||| | || |||| ||||| ||||||||||||||||    
T  24196566 aggctaaactgcacttttcgcctcctatgttttaaaatgttgcgattttggcccc 24196512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 2260378 - 2260427
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg 132  Q
    ||||||| | ||||||||| ||||||||||| ||||| ||||||||||||    
T  2260378 ggctaaagtgcacttttcgacccttaagttttaaaatgttgcgattttgg 2260427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 2657513 - 2657566
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||| |||| |||||||||||| |||||||| ||||| |||||||||| |||||    
T  2657513 ggcttaacttcacttttcgccctttaagttttaaaatgttgcgattttagcccc 2657566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 3617102 - 3617049
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||| ||||||||||||| || |||||||||| |||| ||||| |||||    
T  3617102 ggctaaacttcacttttcgccccctatgtttcaaaatgttgcaattttcgcccc 3617049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 21185297 - 21185380
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    |||||||||| |||||||||||  |||||||||  ||||||| | |||||||||  ||||||  ||||||||||||||||||||||    
T  21185297 gggaaatatgttcttttgaccct-taacataaga-aaatatgatcttttgaccccctatcttctcaaaaagttgcgattatgaccc 21185380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 248
Target Start/End: Complemental strand, 26605487 - 26605408
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatga 248  Q
    |||||||||||| |||||| |||||||||||| | |||||||||||||||    |||| || |||||||||| |||||||||    
T  26605487 gggaaatatgctattttga-cccctaacataa-gaaaatatgttttttgatatcttatttttacaaaaagttacgattatga 26605408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 16551645 - 16551697
Alignment:
Q  84 gctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||| || ||||||||||||  ||||||||||||| |||| |||||||||||    
T  16551645 gctaatctgcacttttcgccctctaagtttcaaaatgttgcaattttggcccc 16551697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 140
Target Start/End: Complemental strand, 16878987 - 16878931
Alignment:
Q  85 ctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctatt 140  Q
    ||||||| ||||||||||| | ||||||||||||| ||| |||||||| ||||||||    
T  16878987 ctaaactgcacttttcgccacctaagtttcaaaatgttgagattttggtcccctatt 16878931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 48471864 - 48471916
Alignment:
Q  84 gctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||| | ||||||||| ||| || |||||||||| ||||||||||||||||    
T  48471864 gctaaagtgcacttttcgtcccctatgtttcaaaatgttgcgattttggcccc 48471916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 6e-52; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 22968459 - 22968283
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    ||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||||||||||||       |||||||    
T  22968459 taggctaaagttcacttttcgccccttaagtttcaaaatgttgcgattttggcccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 22968360  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  22968359 atgctcttttgaccccctaacataagggaaatatgttttttgaccc-ttatctttacaaaaagttgcgattatgaccc 22968283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 23819934 - 23820110
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    ||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||||||||||||       |||||||    
T  23819934 taggctaaagttcacttttcgccccttaagtttcaaaatgttgcgattttggcccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 23820033  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  23820034 atgctcttttgaccccctaacataagggaaatatgttttttgaccc-ttatctttacaaaaagttgcgattatgaccc 23820110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 81 - 253
Target Start/End: Original strand, 8412756 - 8412936
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggc-ccctattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||| |||||||| |||||||||||||||||||| ||||||||||||| |||||||        ||||||||| ||||||||       | ||||    
T  8412756 taggctaaagtccactttccgccccttaagtttcaaaatgttgcgattttggctccctattaaaaaaaatggcaaaagcgaccccctatgtttagagaaa 8412855  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  8412856 tatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgacccct 8412936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 253
Target Start/End: Original strand, 32451716 - 32451904
Alignment:
Q  73 ataaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccctggg-- 169  Q
    |||||||| |||||||||| ||||||||||||  ||||||||||||| ||| |||||||||||| ||||        ||||||||||||||||||  |      
T  32451716 ataaaataaaggctaaacttcacttttcgccctctaagtttcaaaatgttgtgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtt 32451815  T
Q  170 -----aaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
         |||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  32451816 tatagaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgacccct 32451904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 24603361 - 24603539
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctattnnnnnnnntggcaaaagtgaccccct-------gggaaata 174  Q
    ||||||||| ||||||||| || |||||||||||||| |||||||||||  ||||||||        ||||||||||||||||||       ||||||||    
T  24603361 ggctaaacttcacttttcgtcctttaagtttcaaaatgttgcgattttgctcccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaata 24603460  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||||    
T  24603461 tgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccct 24603539  T

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Target: chr6; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 26710611 - 26710433
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaata 174  Q
    ||||||||| ||||||||||||  ||||||||||||| |||||||||||||||| ||||        ||||||||| ||||||||       ||||||||    
T  26710611 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagcgaccccctatgtttagggaaata 26710512  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  26710511 tgctcttttgacctcctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatggcccct 26710433  T

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Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 80 - 253
Target Start/End: Complemental strand, 4597712 - 4597531
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaa 171  Q
    |||||||||||| ||||||||||||  ||||||||||||| |||| ||||||||||| ||||        |||||||| |||||||||       |||||    
T  4597712 ataggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccctattataaaaaatggcaaaaatgaccccctatgtttagggaa 4597613  T
Q  172 atatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| |||||    
T  4597612 atatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcaattatggcccct 4597531  T

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Target: chr6; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 253
Target Start/End: Original strand, 18791356 - 18791535
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggccc-ctattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||||| ||||||||||||  ||||||| ||||| ||||||||||||||| |||||        ||||||||||||||||||       ||||||    
T  18791356 taggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttggccctctattaaaaaaa-tggcaaaagtgaccccctatgtttagggaaa 18791454  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||||||||||| |||||    
T  18791455 tatgctcttttgaccccctaacataagggaaatatgctttttgacccctcatctttacaaaaagttgcgattatggcccct 18791535  T

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Target: chr6; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 81 - 253
Target Start/End: Original strand, 34833923 - 34834103
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattt-tggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||||| ||||||||||||  ||||||||||||| |||| |||  | |||||||||        ||||||||||||||||||       ||||||    
T  34833923 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattcctcgcccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaa 34834022  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||| |||||    
T  34834023 tatgctcttttgacctcctaacataagggaaatatgttttttgacccgttatctttacaaaaagttacaattatggcccct 34834103  T

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Target: chr6; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 3118771 - 3118857
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||| |||||||||||||||||    
T  3118771 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacctcttatctttacaaaaatttgcgattatgacccct 3118857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 250
Target Start/End: Original strand, 24051007 - 24051183
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    ||||||||||| ||||||||||||  ||||||||||||| ||||||||||||||||   |        ||||||||||||||||||       |||||||    
T  24051007 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaatggcaaaagtgaccccctatgtttagggaaat 24051106  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacc 250  Q
    |||||||||||||| ||||||||||| |||||||  |||||||||| |||| || ||||||||||||||||||||||    
T  24051107 atgctcttttgacctcctaacataagagaaatatactttttgaccccttatatttacaaaaagttgcgattatgacc 24051183  T

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Target: chr6; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 246
Target Start/End: Original strand, 31210793 - 31210965
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcc-cctattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    |||||||||| ||||||||||||  ||||||| ||||| |||||||||||||| ||||||        || |||||||||||||||       || ||||    
T  31210793 aggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttggcctcctattaaaaaaaatgacaaaagtgaccccctatgtttaggaaaat 31210892  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattat 246  Q
    |||||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  31210893 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattat 31210965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 25819776 - 25819862
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||| ||||| ||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  25819776 gggaaatatactcttctgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgacccct 25819862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 35102703 - 35102617
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||| |||||| |||||    
T  35102703 gggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccct 35102617  T

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Target: chr6; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 15298577 - 15298657
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||| || ||||||| |||||||||||||||||||    
T  15298577 gggaaatatgctcttttgacctcctaacataaggaaaatatgttttttgatcccttatctttacaaaaagttgcgattatg 15298657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 253
Target Start/End: Complemental strand, 4013968 - 4013792
Alignment:
Q  84 gctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct------gggaaatatgc 177  Q
    |||||||| ||||||||| ||| ||||||||||||| ||||||||||||||||   |        || ||||||||||||||       |||||||||||    
T  4013968 gctaaactgcacttttcgtcccctaagtttcaaaatgttgcgattttggccccctattaaaaaaatgtcaaaagtgacccccatgtttagggaaatatgc 4013869  T
Q  178 tcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||| |||||||||||||| | ||||||||| |||||||  ||||| |||||||||||| |||||    
T  4013868 tcttttgaccccctaatataagggaaatatgatcttttgaccccttatcttctcaaaatgttgcgattatggcccct 4013792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 14572482 - 14572310
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct------gggaaata 174  Q
    ||||||||| ||||||||||||||  ||||||| ||||| |||| |||||||||||   |        ||||||||||||||||        ||||||||    
T  14572482 taggctaaagtccacttttcgccctctaagttttaaaatattgcaattttggccccctattaaaaaaatggcaaaagtgacccctatgtttagggaaata 14572383  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||||||  |||||||||||||||||||| |||||||||| ||||||| | |||||||||||||||||    
T  14572382 tgctcttttgacatcctaacataagggaaatatgctttttgaccccttatctttataaaaagttgcgattatg 14572310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 22269410 - 22269584
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggccc-ctattnnnnnnnntggcaaaagtgaccccct------gggaaatat 175  Q
    ||||||||| ||||||||| ||  ||||||||||||| ||||||||||||||| |||||        ||||||||||||||||        |||||||||    
T  22269410 ggctaaactgcacttttcgtcctctaagtttcaaaatattgcgattttggccctctattaaaaaa--tggcaaaagtgacccctatgtttagggaaatat 22269507  T
Q  176 gctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    | |||||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||| | ||||| |||||    
T  22269508 gttcttttgaccct-taacataagggaaatatgttttttgaccccttatctttacaaaaagttgtgtttatggcccct 22269584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 170 - 253
Target Start/End: Complemental strand, 19282420 - 19282337
Alignment:
Q  170 aaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||| |||||| | ||||||||||||||||||||  ||||||||| |||||||  ||||||||||||||||||||||||    
T  19282420 aaatatgctattttgaactcctaacataagggaaatatgcattttgaccccttatcttttcaaaaagttgcgattatgacccct 19282337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 32682490 - 32682419
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagtt 238  Q
    ||||||||||||||||||||| | |||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  32682490 gggaaatatgctcttttgacctcataacataaaggaaatatgttttttgaccccttatctttacaaaaagtt 32682419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 18749308 - 18749222
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||| || ||||||| | |||||||||||||||||| |||||||||| ||||||| ||||||||||| ||||||| |||||    
T  18749308 gggaaatatgttcatttgacctcataacataagggaaatatgctttttgaccccttatctttacaaaaagttgtgattatgtcccct 18749222  T

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Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 210
Target Start/End: Complemental strand, 18749432 - 18749297
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaata 174  Q
    ||||||||| ||||||||||||  ||||||||||||| ||||||||||| |||| ||||        ||||||||||||||||||       ||||||||    
T  18749432 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaata 18749333  T
Q  175 tgctcttttgaccccctaacataagggaaatatgtt 210  Q
    ||||||||||||| | ||||||||||||||||||||    
T  18749332 tgctcttttgacctcttaacataagggaaatatgtt 18749297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 24615905 - 24615822
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    ||||||||||||||||||||||| ||||||| | |||||||| |||||||||| || |||| || ||||||||||||||||||||    
T  24615905 gggaaatatgctcttttgacccc-taacatatgagaaatatgctttttgacccattctctttactaaaagttgcgattatgaccc 24615822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 12291618 - 12291547
Alignment:
Q  179 cttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgac 249  Q
    |||||||||||||||||||||||||||||| | ||||||||| |||||||  ||||||||||||||||||||    
T  12291618 cttttgaccccctaacataagggaaatatgatcttttgaccctttatcttctcaaaaagttgcgattatgac 12291547  T

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Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 253
Target Start/End: Original strand, 26240048 - 26240135
Alignment:
Q  168 ggaaatatgctcttttgaccccc-taacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||||||   |||||||||| ||||||||||||    
T  26240048 ggaaatatgctcttttgacccccttaacataagggaaatatgatcttttgaccccttatcttctaaaaaagttgcaattatgacccct 26240135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 242
Target Start/End: Original strand, 4370990 - 4371065
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcga 242  Q
    ||||||||||||||||||| |||||||||||||||||||||| |  |||||||| ||||||| ||||||||||||||    
T  4370990 gggaaatatgctcttttga-cccctaacataagggaaatatgctcctttgaccccttatctttacaaaaagttgcga 4371065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 9241745 - 9241824
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||| |||||||||||  |||||||||||||||||| | ||||||||| |||||||  ||||||||||||||||||    
T  9241745 gggaaatatgttcttttgaccc--taacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatg 9241824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 2636888 - 2636954
Alignment:
Q  187 cccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacccc 252  Q
    |||||||||||||| ||||||| | ||||||||| |||| || ||||||||||||||||||||||||    
T  2636888 cccctaacataaggtaaatatgctattttgaccccttatttttacaaaaagttgcgattatgacccc 2636954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 12427323 - 12427409
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaac-aaaaagttgcgattatgaccc 251  Q
    ||||||||||||||||||| ||  |||||||| ||||||||| |||||| |||| ||||||| || |||||||||||||| ||||||    
T  12427323 gggaaatatgctcttttgaaccattaacataaaggaaatatgttttttttaccctttatctttacaaaaaagttgcgattttgaccc 12427409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 16415543 - 16415458
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    |||||||||  |||||||||| |||||||||||||||||||| | ||||||||  |||||||   |||||||||||||||| ||||    
T  16415543 gggaaatatattcttttgaccgcctaacataagggaaatatgatattttgaccgcttatcttctaaaaaagttgcgattataaccc 16415458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 18749094 - 18749150
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||||| |||||||||||||||| |||| ||||| |||| |||||||||||    
T  18749094 ataggctaaactgcacttttcgccccttatgttttaaaatgttgcaattttggcccc 18749150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 23124888 - 23124846
Alignment:
Q  211 ttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||| ||||||| |||||||||||||||||||||||||    
T  23124888 ttttgaccccttatctttacaaaaagttgcgattatgacccct 23124846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 2059034 - 2058993
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg 208  Q
    |||||||||||| ||||||| |||||||||||||||||||||    
T  2059034 gggaaatatgctattttgacaccctaacataagggaaatatg 2058993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 34528252 - 34528320
Alignment:
Q  180 ttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||| |||||||||||||  |||||||| | ||||||||| |||||||  ||||||||||||||||||    
T  34528252 ttttggccccctaacataaatgaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatg 34528320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 4597400 - 4597463
Alignment:
Q  78 atataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctatt 140  Q
    ||||||| |||| | ||||||||||||| || |||||||||| |||||||||||| ||||||||    
T  4597400 atataggataaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggtcccctatt 4597463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 35102489 - 35102544
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||| | ||||||||||||| || |||||||||| |||||||||| |||||    
T  35102489 taggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttagcccc 35102544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 20863896 - 20863854
Alignment:
Q  211 ttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||| ||||||| ||||||||||||||||||| |||||    
T  20863896 ttttgaccccttatctttacaaaaagttgcgattatggcccct 20863854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 131
Target Start/End: Complemental strand, 34834238 - 34834180
Alignment:
Q  73 ataaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttg 131  Q
    |||||| | |||||||| | |||||||||||||||| |||| ||||| |||||||||||    
T  34834238 ataaaagaaaggctaaagtgcacttttcgccccttatgttttaaaatattgcgattttg 34834180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 35102768 - 35102714
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||| |||| ||||||||||||  ||||||||||||| |||| |||||||||||    
T  35102768 aggctcaacttcacttttcgccctctaagtttcaaaatgttgcaattttggcccc 35102714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 3118989 - 3118928
Alignment:
Q  75 aaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||| |||||||||||| ||||||||||||| || |||||| ||| ||  ||||||||||||    
T  3118989 aaaaaataggctaaactgcacttttcgccccctatgtttcataatgttatgattttggcccc 3118928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 7316403 - 7316342
Alignment:
Q  75 aaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||| |||||||||| | |||||||| |||||||| ||||||||  |||| |||||||||||    
T  7316403 aaaaaataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggcccc 7316342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 12291430 - 12291471
Alignment:
Q  96 ttttcgccccttaagtttcaaaattttgcgattttggcccct 137  Q
    |||||| ||| ||||||||||||| |||||||||||||||||    
T  12291430 ttttcgtcccctaagtttcaaaatgttgcgattttggcccct 12291471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 81 - 253
Target Start/End: Original strand, 49657 - 49837
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||||||||| ||||||||        ||||| ||||||||||||       ||||||    
T  49657 taggctaaagtccacttttcgccccttaagttttaaaatgttgcgattttggacccctattaaaaaaaatggcacaagtgaccccctatgtttcgggaaa 49756  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  49757 tatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgacccct 49837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 81 - 253
Target Start/End: Original strand, 62196 - 62376
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||||||||| ||||||||        ||||| ||||||||||||       ||||||    
T  62196 taggctaaagtccacttttcgccccttaagttttaaaatgttgcgattttggacccctattaaaaaaaatggcacaagtgaccccctatgtttcgggaaa 62295  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  62296 tatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgacccct 62376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 6e-49; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 81 - 253
Target Start/End: Original strand, 15700745 - 15700925
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||||||||| ||||||||        ||||| ||||||||||||       ||||||    
T  15700745 taggctaaagtccacttttcgccccttaagttttaaaatgttgcgattttggacccctattaaaaaaaatggcacaagtgaccccctatgtttcgggaaa 15700844  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  15700845 tatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgacccct 15700925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 81 - 253
Target Start/End: Original strand, 4587858 - 4588039
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnn-tggcaaaagtgaccccct-------gggaa 171  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| ||||         ||||||||||||||||||       |||||    
T  4587858 taggctaaacaccacttttcgccccctaagtttcaaaatgttgcgattttggccccctattaaaaaaaaatggcaaaagtgaccccctatgtttagggaa 4587957  T
Q  172 atatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||    
T  4587958 atatgctcttttgaccccctaacataagggaaatatgttttttaaccccttatctttacaaaaagttgcgattatgacccct 4588039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 79 - 253
Target Start/End: Original strand, 15735060 - 15735242
Alignment:
Q  79 tataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctattnnnnnnnntggcaaaagtgaccccct-------ggga 170  Q
    ||||||||||||| ||||||||||||  ||||||||||||| |||||||||||| ||||||||        ||||||||||||||||||       ||||    
T  15735060 tataggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggtcccctattaaaagaaatggcaaaagtgaccccctatgttttggga 15735159  T
Q  171 aatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||| |||||    
T  15735160 aatatgctcttttgacctcgtaacataagggaaatatgtattttgaccccttatctttacaaaaagttgcgattatggcccct 15735242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 253
Target Start/End: Complemental strand, 30714588 - 30714400
Alignment:
Q  73 ataaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct----- 166  Q
    ||||||||||||||||||| ||||||||||||  ||| ||| ||||| |||| ||||||||||| ||||        ||||||||||||||||||         
T  30714588 ataaaatataggctaaacttcacttttcgccctctaaattttaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtt 30714489  T
Q  167 --gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
      ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| |||||    
T  30714488 tcgggaaatatgctcttttgacctcctaacataagggaaatatgctttttgacccgttatctttacaaaaagttgtgattatggcccct 30714400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 86 - 253
Target Start/End: Original strand, 2986689 - 2986864
Alignment:
Q  86 taaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaatatgc 177  Q
    |||||| |||||||||||| |||||||||||||| |||||||||||||||| ||||        || |||||||||||||||       |||||||||||    
T  2986689 taaacttcacttttcgccctttaagtttcaaaatgttgcgattttggccccctattaaaaaaaatgacaaaagtgaccccctatgtttagggaaatatgc 2986788  T
Q  178 tcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||||    
T  2986789 tcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccct 2986864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 82 - 253
Target Start/End: Original strand, 11175906 - 11176085
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    |||||||||| ||||||||||||  ||||||||||||| |||||||||||||||| ||||        ||||||||||||||||||       |||||||    
T  11175906 aggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 11176005  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||| ||||||| |||||    
T  11176006 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgtgattatggcccct 11176085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 75 - 247
Target Start/End: Complemental strand, 9051339 - 9051159
Alignment:
Q  75 aaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct------- 166  Q
    ||||||||||||||||| ||||||||||||  ||||||| ||||| ||||||||||| |||| ||||        ||||||||||||| ||||           
T  9051339 aaaatataggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgactccctatgttta 9051240  T
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||  ||||||| |||||||||||||||||||    
T  9051239 gggaaatatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 9051159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 253
Target Start/End: Complemental strand, 18538134 - 18537954
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||||| ||||||||||||  ||||||||||||| |||||||||||||||| ||||        ||||||||||||||||||       ||||||    
T  18538134 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaa 18538035  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||| |||||||| | |||||| ||||||||||| |||||||||| ||||||| |||||||||||| |||||| |||||    
T  18538034 tatgcttttttgacctcataacattagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccct 18537954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 82 - 245
Target Start/End: Complemental strand, 6764022 - 6763851
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    |||||||||| || |||||||||  ||||||||||||| |||||||||||| ||||||||        ||||||||||||||||||       |||||||    
T  6764022 aggctaaacttcatttttcgccctctaagtttcaaaatgttgcgattttggtcccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 6763923  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgatta 245  Q
    |||||||||||||| |||||||||||| ||||||| |||||||||| ||||||| ||||||||| |||||||    
T  6763922 atgctcttttgacctcctaacataaggaaaatatgctttttgaccccttatctttacaaaaagtagcgatta 6763851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 80 - 253
Target Start/End: Complemental strand, 25299107 - 25298927
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    |||||||||||| || |||||||||  ||||||||||||| |||||||||| |||||   |        ||||||||||||||||||       ||||||    
T  25299107 ataggctaaacttcaattttcgccctctaagtttcaaaatgttgcgattttagccccctattaaaaaaatggcaaaagtgaccccctatgtttagggaaa 25299008  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||| | |||||||| ||||||||||||||||| || ||||||| ||||||||||||||||||| |||||    
T  25299007 tatgctcttttgacctcttaacataaaggaaatatgttttttgatcccttatctttacaaaaagttgcgattatggcccct 25298927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 251
Target Start/End: Original strand, 22191037 - 22191222
Alignment:
Q  74 taaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct------ 166  Q
    |||||| ||||||||||| ||||||||| ||| || |||| ||||| |||| ||||||||||| |||         ||||||||||||||||||          
T  22191037 taaaatttaggctaaactacacttttcgtcccctatgttttaaaatgttgcaattttggccccctatcaaaaaaaatggcaaaagtgaccccctatgttt 22191136  T
Q  167 -gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
     ||||||||||||||||||||  ||||||||||||||||||||  ||||||||| ||||||| |||||||||| ||||||||||||    
T  22191137 agggaaatatgctcttttgacttcctaacataagggaaatatgccttttgaccccttatctttacaaaaagttacgattatgaccc 22191222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 38716285 - 38716371
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||||||| ||||||| ||||||||||||||||||| |||||    
T  38716285 gggaaatatgctcttttgacctcctaacataagagaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccct 38716371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 9787651 - 9787737
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||||||| ||||||| |||||||||| |||||||| |||||    
T  9787651 gggaaatatgctcttttgacctgctaacataagggaaatatgctttttgaccccttatctttacaaaaagttacgattatggcccct 9787737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 173 - 253
Target Start/End: Original strand, 17368314 - 17368394
Alignment:
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||| |||||| |||||    
T  17368314 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccct 17368394  T

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Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 331804 - 331891
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||||||||| ||||| ||||||||||||| |||||||| || |||||||  ||||||||||||||||||||||||    
T  331804 gggaaatatgctcttttgaccctctaacttaagggaaatatgcttttttgatccattatctttgcaaaaagttgcgattatgacccct 331891  T

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Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 243
Target Start/End: Original strand, 36464289 - 36464441
Alignment:
Q  96 ttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccctg-----ggaaatatgctcttttgaccccc 190  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||        |||||||||||||||| ||     ||||||||| |||||||||||||    
T  36464289 ttttcgccccttaagttttaaaatgttgcgattttgacccctatttaaaaaa-tggcaaaagtgaccccatgtttagggaaatatgatcttttgaccccc 36464387  T
Q  191 taacataagggaaatat-gttttttgacccgttatcttaacaaaaagttgcgat 243  Q
    |||||||||||||||||  | ||||||| | |||||||  ||||||||||||||    
T  36464388 taacataagggaaatataatcttttgactccttatcttctcaaaaagttgcgat 36464441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 22387278 - 22387195
Alignment:
Q  169 gaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccc 252  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||  ||||| ||||| ||||||| ||||    
T  22387278 gaaatatgctcttttgaccccctaacatatgagaaatatgttttttgaccccttatctatacaaagagttgtgattatggcccc 22387195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 2190624 - 2190709
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    |||||||||||||||||||||| ||||| ||||| ||||||| |  |||| ||| ||||||| ||||||||||||| |||||||||    
T  2190624 gggaaatatgctcttttgaccctctaacttaaggaaaatatgctcgtttggccccttatctttacaaaaagttgcggttatgaccc 2190709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 28365602 - 28365686
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    ||||||||||||| ||||||||| |||||| ||||||||||| | |||| |||| |||||||  ||||||||||||||||||||||    
T  28365602 gggaaatatgctcgtttgacccc-taacatgagggaaatatgatcttttaaccccttatcttctcaaaaagttgcgattatgaccc 28365686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 244
Target Start/End: Original strand, 1020483 - 1020559
Alignment:
Q  168 ggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgatt 244  Q
    ||||||||||| ||||||||| |||||||||| |||||||| |||||| ||| |||||||  |||||||||| ||||    
T  1020483 ggaaatatgctattttgaccctctaacataagagaaatatgatttttgtccctttatcttttcaaaaagttgtgatt 1020559  T

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Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 26829300 - 26829216
Alignment:
Q  168 ggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgacccc 252  Q
    ||||||||||||||| |||||| |||||||||||||||||| | ||||||||| ||||| |  |||||||||| ||||||| ||||    
T  26829300 ggaaatatgctctttggacccc-taacataagggaaatatgatcttttgaccccttatcatctcaaaaagttgtgattatggcccc 26829216  T

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Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 4105036 - 4104950
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||  |||||||||| | ||||||||||| |||||| | ||||||| | |||| || |||||||||||||||||||||||||    
T  4105036 gggaaatatattcttttgacctc-taacataaggggaatatgctcttttgacaccttatatttacaaaaagttgcgattatgacccct 4104950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 251
Target Start/End: Original strand, 21494555 - 21494626
Alignment:
Q  180 ttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    ||||||||| |||||| ||| |||||||||||||||  |  ||||||| ||||||||||||| |||||||||    
T  21494555 ttttgaccctctaacagaagagaaatatgttttttgttctcttatctttacaaaaagttgcgtttatgaccc 21494626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 25884176 - 25884231
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||||| ||| ||||||||| ||||||| ||||| ||||||||||||||||    
T  25884176 taggctaaactgcacatttcgccccctaagttttaaaatgttgcgattttggcccc 25884231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 25884388 - 25884310
Alignment:
Q  169 gaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattat 246  Q
    |||||||| | |||| | |||||||||||||||||||||| | |||| |||| |||||||  |||||||||||||||||    
T  25884388 gaaatatgttattttaatcccctaacataagggaaatatgatattttaaccccttatcttctcaaaaagttgcgattat 25884310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 36449769 - 36449831
Alignment:
Q  74 taaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||||||||| | |||||||| |||||||| ||||||||  |||| |||||||||||    
T  36449769 taaaatataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggcccc 36449831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 36464581 - 36464527
Alignment:
Q  77 aatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttg 131  Q
    |||||||| |||||| ||||||||||| | ||||||||||||| |||||||||||    
T  36464581 aatataggttaaactgcacttttcgcctcctaagtttcaaaatgttgcgattttg 36464527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 43301656 - 43301714
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctatt 140  Q
    |||||||||| || |||||||| |||||||||| |||| |||||||||||||| |||||    
T  43301656 aggctaaactgcatttttcgcctcttaagtttcgaaatgttgcgattttggcctctatt 43301714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 2123468 - 2123549
Alignment:
Q  169 gaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgac 249  Q
    ||||||||||||||||| || ||| | | ||||||||| ||| ||||||||| ||||||| |||||||||||| ||| ||||    
T  2123468 gaaatatgctcttttgatcctctatctttagggaaataagttcttttgaccctttatctttacaaaaagttgcaattttgac 2123549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 9787861 - 9787808
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||| ||||||||||||| || |||||||||| |||| |||||||||||    
T  9787861 ggctaaactacacttttcgccccctatgtttcaaaatattgcaattttggcccc 9787808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 17368518 - 17368461
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctatt 140  Q
    ||||||||  ||||||||||||| || |||||||||| |||| |||||||||||||||    
T  17368518 ggctaaacaacacttttcgccccctatgtttcaaaatgttgcaattttggcccctatt 17368461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 30714273 - 30714328
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||| | ||||||||||||| || |||| ||||| ||||||||||||||||    
T  30714273 taggctaaagtgcacttttcgccccctatgttttaaaatgttgcgattttggcccc 30714328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 246
Target Start/End: Original strand, 15147835 - 15147884
Alignment:
Q  198 agggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattat 246  Q
    ||||||||||| | |||||| || ||||||||||||||||||||||||||    
T  15147835 agggaaatatgctcttttgatccattatcttaacaaaaagttgcgattat 15147884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 15735367 - 15735318
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg 132  Q
    ||||||||||||||||||||||| || |||| ||||| |||| |||||||    
T  15735367 ggctaaactccacttttcgccccctatgttttaaaatgttgcaattttgg 15735318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 1020654 - 1020594
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctatt 140  Q
    |||||||||||| ||||||| |  |||||||||| ||||| ||| |||||||| |||||||    
T  1020654 ataggctaaactgcacttttagatccttaagttttaaaatgttgtgattttggtccctatt 1020594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 73 - 253
Target Start/End: Complemental strand, 48176276 - 48176089
Alignment:
Q  73 ataaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct----- 166  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||| ||||        |||||||||| || ||||         
T  48176276 ataaaatataggctaaactctacttttcgccccctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtaactccctatgtt 48176177  T
Q  167 --gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
      ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  48176176 tagggaaatatgctcttttgacccc-taacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgacccct 48176089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 80 - 249
Target Start/End: Complemental strand, 18754573 - 18754396
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctattnnnnnnnntggcaaaagtgaccccct-------gggaa 171  Q
    ||||| |||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||        |||||||||||| || ||       |||||    
T  18754573 ataggttaaactccacttttcgccccctaagtttcaaaatgttgcgattttggtcccctattaaaaaaaatggcaaaagtgatcctctatgtttagggaa 18754474  T
Q  172 atatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgac 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||    
T  18754473 atatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaatgttgcgattatgac 18754396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 81 - 253
Target Start/End: Original strand, 20636617 - 20636797
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||||| ||||||| ||||  ||||||| ||||| |||||||||||||||| ||||        ||||||||||||||||||       ||||||    
T  20636617 taggctaaacttcactttttgccctctaagttttaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaa 20636716  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  20636717 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgacccct 20636797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 253
Target Start/End: Complemental strand, 27869509 - 27869321
Alignment:
Q  73 ataaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggc-ccctattnnnnnnnntggcaaaagtgaccccct----- 166  Q
    ||||| |||||| |||||| ||||||||||||  ||||||||||||| ||||||||||||  |||||||        ||||||||||||||||||         
T  27869509 ataaattataggttaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggagccctattaaaaaaaatggcaaaagtgaccccctatgtt 27869410  T
Q  167 --gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
      ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||||    
T  27869409 tagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccct 27869321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 81 - 247
Target Start/End: Original strand, 20638489 - 20638663
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||||| ||||||| ||||  ||||||| ||||| |||||||||||||||| ||||        ||||||||||||||||||       ||||||    
T  20638489 taggctaaacttcactttttgccctctaagttttaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaa 20638588  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  20638589 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 20638663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 82 - 253
Target Start/End: Original strand, 31493910 - 31494088
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct------gggaaata 174  Q
    |||||||||||||||||||| ||| ||||||||||||| || ||||||||||||| ||||        ||||||||||||||||        ||||||||    
T  31493910 aggctaaactccacttttcggcccctaagtttcaaaatgttacgattttggccccctattaacaaaaatggcaaaagtgacccctatgtttagggaaata 31494009  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||| ||||||| ||||||||||||||||||| |||||    
T  31494010 tgctcttttgaccctctaacataaggaaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccct 31494088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 80 - 247
Target Start/End: Complemental strand, 21224659 - 21224484
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaa 171  Q
    |||||||||||| ||||||||||||  ||||||||||||| ||||||||||| |||| | ||         |||||||||||||||||       |||||    
T  21224659 ataggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccccctgttaaaaaaaaaggcaaaagtgaccccctatgtttagggaa 21224560  T
Q  172 atatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  21224559 atatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 21224484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 74 - 253
Target Start/End: Complemental strand, 24597828 - 24597641
Alignment:
Q  74 taaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct------ 166  Q
    |||||| | ||||||||| ||||||||||||  ||||||| ||||| ||||||||||| |||| ||||        |||||||||| |||||||          
T  24597828 taaaattttggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttgtccccctattaaaaaaaatggcaaaagtaaccccctatgttt 24597729  T
Q  167 -gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
     ||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||| |||||    
T  24597728 agggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttctctttacaaaaagttgcgattatggcccct 24597641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 81 - 246
Target Start/End: Complemental strand, 19919907 - 19919736
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccc-----tgggaaata 174  Q
    ||||||||||| ||||||||||||  ||||||||||||| ||||||||||| |||| ||||         ||||||||||||||||     | |||||||    
T  19919907 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccccctattaaaaaaaaaggcaaaagtgacccccatgtttaggaaata 19919808  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattat 246  Q
    ||||||||||||| |||||||||||| |||||||||||||||||| ||||||| ||||||||||| ||||||    
T  19919807 tgctcttttgacctcctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgtgattat 19919736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 35337734 - 35337648
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  35337734 gggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgacccct 35337648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 81 - 253
Target Start/End: Complemental strand, 3562738 - 3562559
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct------gggaaat 173  Q
    |||| |||||| ||||||||| ||  ||||||||||||| || ||||||||||||| ||||        ||||||||||||||||        |||||||    
T  3562738 taggttaaacttcacttttcgtcctctaagtttcaaaatgttacgattttggccccctattaaaaaaaatggcaaaagtgacccctatgtttagggaaat 3562639  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||||    
T  3562638 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccct 3562559  T

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Target: chr7; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 253
Target Start/End: Complemental strand, 11843483 - 11843304
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    |||||||||||| ||||||||| |||||||||||||||| ||||||||||| |||| ||||        |||||||||||||| |||       ||||||    
T  11843483 taggctaaactctacttttcgctccttaagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgacctcctatgtttagggaaa 11843384  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||||| ||||| | |||||||||||| |||||| |||||    
T  11843383 tatgctcttttgacccc-taacataaggaaaatatgctttttgaccccttatccttacaaaaagttgcaattatggcccct 11843304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 247
Target Start/End: Original strand, 42271333 - 42271504
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcc-cctattnnnnnnnntggcaaaagtgaccccct-------gggaaata 174  Q
    ||||||| | || |||||||||  ||||||||||||| |||||||||||||| ||||||        ||||||||||||||||||       ||||||||    
T  42271333 ggctaaatttcatttttcgccctctaagtttcaaaatgttgcgattttggcctcctattaaaaaaa-tggcaaaagtgaccccctatgtttagggaaata 42271431  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||||||| |||||||||||||||||||| |||||||||| |||| || |||||||||||||||||||    
T  42271432 tgctcttttgacctcctaacataagggaaatatgctttttgaccccttatgtttacaaaaagttgcgattatg 42271504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 247
Target Start/End: Original strand, 2331015 - 2331185
Alignment:
Q  84 gctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaatatg 176  Q
    |||||||| ||||||||| ||  ||||||| ||||| |||| ||||||||||||  |        ||||||||||||||||||       ||||||||||    
T  2331015 gctaaacttcacttttcgtcctctaagttttaaaatgttgcaattttggccccttattaaaaaaatggcaaaagtgaccccctatgtttagggaaatatg 2331114  T
Q  177 ctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||||| |||||||||||||||||||| |||||||| | ||||||| |||||||||||||||||||    
T  2331115 ctcttttgacctcctaacataagggaaatatgctttttgactccttatctttacaaaaagttgcgattatg 2331185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 253
Target Start/End: Complemental strand, 13578091 - 13577912
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggccc-ctattnnnnnnnntggcaaaagtgaccccc-tg-----ggaaa 172  Q
    ||||||||||||| |||||||||||| ||||||||||||| ||||||||||| ||| |||||        ||||||||||||||||  ||     |||||    
T  13578091 ataggctaaactctacttttcgccccctaagtttcaaaatgttgcgattttgaccctctattaaaaaaaatggcaaaagtgacccctatgtttaaggaaa 13577992  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||| ||||||  |||||||||||  |||||| |||||    
T  13577991 tatgctcttttgacccc-taacataagggaaatatgctttttgaccctttatctatacaaaaagttgaaattatggcccct 13577912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 19195517 - 19195339
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaata 174  Q
    ||||||||| |||||||| |||  ||||||| ||||| |||| |||||| |||| ||||        ||||||||||||||||||       ||||||||    
T  19195517 ggctaaacttcacttttcaccctctaagttttaaaatgttgcaattttgaccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaata 19195418  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
     |||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| |||||    
T  19195417 cgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgtgattatggcccct 19195339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 41452461 - 41452375
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||| ||||| ||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  41452461 gggaaatatactcttctgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgacccct 41452375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 82 - 253
Target Start/End: Original strand, 14624607 - 14624780
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccctg-----ggaaatatg 176  Q
    |||||||||| ||||||||| ||| ||||||||||||| ||||||||||||||||||||        |||||||||| ||||  ||     | |||||||    
T  14624607 aggctaaactacacttttcgtcccctaagtttcaaaatattgcgattttggcccctattaaaaaa--tggcaaaagtaacccaatgtttaggaaaatatg 14624704  T
Q  177 ctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||  |||||||||||||||||  |||||||||| ||||||| |||||||||||| |||||| |||||    
T  14624705 ctcttttgaccca-taacataagggaaatatactttttgaccctttatctttacaaaaagttgcaattatggcccct 14624780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 44078083 - 44078000
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaac-aaaaagttgcgattatgac 249  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| || |||||||||||||||||||    
T  44078083 gggaaatatgctcttttgacctcctaacataagagaaatatgttttttgaccccttatctttacaaaaaagttgcgattatgac 44078000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 10023996 - 10023910
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||||| |||||||| |||||| ||||||||||| ||||||| |||||||||||||| |||| |||||    
T  10023996 gggaaatatgctcttttgacccccttacataaggaaaatattttttttgaccccttatctttacaaaaagttgcgaatatggcccct 10023910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 170 - 252
Target Start/End: Original strand, 17305859 - 17305941
Alignment:
Q  170 aaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccc 252  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||| |||| || ||||||||||| ||||||||||||    
T  17305859 aaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatttttacaaaaagttgtgattatgacccc 17305941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 36746715 - 36746629
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||| ||||||||||| ||||||||  |||| |||| ||||||| |||||||||||||||||||||||||    
T  36746715 gggaaatatgctcttttgacctcctaacataagagaaatatgccttttaaccccttatctttacaaaaagttgcgattatgacccct 36746629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 253
Target Start/End: Complemental strand, 24448257 - 24448169
Alignment:
Q  166 tgggaaatatgctcttttgaccccctaacataagggaaatatgttttt-tgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||  || ||||||| |||||    
T  24448257 tgggaaatatgcttttttgaccccctaacataagggaaatatgtttttatgaccccttatctttacaaaaaaatgtgattatggcccct 24448169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 21225759 - 21225677
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacc 250  Q
    ||||||||||||||||||||||| |||||||||||||||||| | |||||||| |  |||| ||||||||||||||||||||||    
T  21225759 gggaaatatgctcttttgacccc-taacataagggaaatatgctatttgacccctcgtctttacaaaaagttgcgattatgacc 21225677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 24464667 - 24464748
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||| ||||||||||||||||||||||||||||||| | ||||||||| |||||||  ||||| ||||||||||||    
T  24464667 gggaaatatgttcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaatgttgcgattatg 24464748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 10655422 - 10655505
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    ||||||||||||||||| | ||||||| ||||| ||||||| |||||| |||| ||||||| |||||||||||||||||||||||    
T  10655422 gggaaatatgctcttttaatcccctaatataagagaaatat-ttttttaaccccttatctttacaaaaagttgcgattatgaccc 10655505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 4571556 - 4571469
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||| ||||| |||||||||||||||||| | ||||||||| |||||||  ||||||||||||||| || |||||    
T  4571556 gggaaatatgctctttttaccccataacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattgtggcccct 4571469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 26126346 - 26126432
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||| |||||||||| |||||||||||||||||| | ||||||||| |||||||  |||||||||||||||||| |||||    
T  26126346 gggaaatatgcttttttgacccc-taacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatggcccct 26126432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 253
Target Start/End: Original strand, 8526794 - 8526973
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||| | |||||||| |||  |||||||||||||||||| |||||| |||| ||||        |||||||| |||||||||       || |||    
T  8526794 taggctaaatttcacttttcaccctctaagtttcaaaattttgcaattttgaccccctattaataaaaatggcaaaaatgaccccctatgtttaggaaaa 8526893  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||| ||||||| |||||||||||||||||||| ||||||||||  ||| || |||||||||||| |||||| |||||    
T  8526894 tatgctcatttgacctcctaacataagggaaatatgctttttgaccc-ctatttttacaaaaagttgcaattatggcccct 8526973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 172 - 253
Target Start/End: Complemental strand, 39440328 - 39440246
Alignment:
Q  172 atatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||| |||||||||| |||||||||||||||||||| | |||||| || |||||||  ||||||||||||||||||||||||    
T  39440328 atatgatcttttgacctcctaacataagggaaatatgatcttttgatcccttatcttttcaaaaagttgcgattatgacccct 39440246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 3403261 - 3403180
Alignment:
Q  170 aaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgacc 250  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||| || |||| ||  |||||| ||||||||||||||    
T  3403261 aaatatgctcttttgaccccctaacataagggaaatatgatcttttgatcccttatgttctcaaaaacttgcgattatgacc 3403180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 15681721 - 15681802
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||| |||| |||||||||||||||||||||||||| |||| | ||||||||| |||||||  ||||||||||||||||||    
T  15681721 gggaactatgatcttttgaccccctaacataagggaactatgatcttttgaccccttatcttgtcaaaaagttgcgattatg 15681802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 5111534 - 5111617
Alignment:
Q  170 aaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||| |||||||||||| |||||||||||||||||| | ||||||||| |||||||  |||||||||||||||||| |||||    
T  5111534 aaatatgttcttttgacccc-taacataagggaaatatgatattttgaccccttatcttctcaaaaagttgcgattatggcccct 5111617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 6798126 - 6798074
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccc 219  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  6798126 gggaaatatgctcttttgaccctctaacataagggaaatatgatttttgaccc 6798074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 25002712 - 25002883
Alignment:
Q  84 gctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccctg-----ggaaatatgct 178  Q
    |||||||| |||||||||  || ||||||||||||| ||| ||||||||||||||||        |||||||| ||||||| ||     ||||| |||||    
T  25002712 gctaaactgcacttttcgtgccctaagtttcaaaatgttgtgattttggcccctattaaataaa-tggcaaaaatgaccccatgtttagggaaacatgct 25002810  T
Q  179 cttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    ||||||||||| |||||||| ||||||||| | ||||||||| |||||||  || ||| |||||||||||||||    
T  25002811 cttttgacccc-taacataaaggaaatatgatcttttgaccccttatcttctcataaatttgcgattatgaccc 25002883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 9822296 - 9822225
Alignment:
Q  183 tgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||||||||||| | | ||||||||| |||||||  ||||||||||||||||||||||||    
T  9822296 tgaccccctaacataagggaaatacgatcttttgaccccttatcttctcaaaaagttgcgattatgacccct 9822225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 10724221 - 10724150
Alignment:
Q  183 tgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||||||||||| | | ||||||||| |||||||  ||||||||||||||||||||||||    
T  10724221 tgaccccctaacataagggaaatacgatcttttgaccccttatcttctcaaaaagttgcgattatgacccct 10724150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 39182027 - 39182106
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||||||||||||||   |||||||||||||||||| | ||||||||| |||||||  ||||||||||||||||||    
T  39182027 gggaaatatgctcttttgacca--taacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatg 39182106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 4193642 - 4193728
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||  ||||||||| |||||||| | ||||||||| |||||||  ||||||||||| |||||| |||||    
T  4193642 gggaaatatgctcttttgaccct-taacataagagaaatatgatcttttgaccccttatcttttcaaaaagttgcaattatggcccct 4193728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 6650543 - 6650598
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccct 137  Q
    |||||||||| |||| |||||||| ||||||| |||||||||||||||||||||||    
T  6650543 aggctaaactgcactgttcgccccctaagttttaaaattttgcgattttggcccct 6650598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 253
Target Start/End: Original strand, 3769498 - 3769583
Alignment:
Q  169 gaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaa-agttgcgattatgacccct 253  Q
    |||||||||| |||||||||| ||||||| | |||||||| ||||||| |  ||||||| |||||| |||||||||||||| ||||    
T  3769498 gaaatatgcttttttgaccccttaacatatgagaaatatgctttttgatctcttatctttacaaaaaagttgcgattatgatccct 3769583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 9157259 - 9157183
Alignment:
Q  170 aaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattat 246  Q
    |||||||||||||||||||| ||||||||| |||||||| | ||||||||  |||||||  |||||||||||||||||    
T  9157259 aaatatgctcttttgacccc-taacataagtgaaatatgatcttttgaccacttatcttctcaaaaagttgcgattat 9157183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 15681689 - 15681730
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg 208  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  15681689 gggaaatatgctcttttgaccccctaacataagggaactatg 15681730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 26385353 - 26385433
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||||| |||||||||| ||||||||| |||||||| | ||||||||  |||||||  ||||||||||||||||||    
T  26385353 gggaaatatgctattttgacccc-taacataagagaaatatgatattttgacctcttatcttctcaaaaagttgcgattatg 26385433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 136
Target Start/End: Complemental strand, 8527108 - 8527045
Alignment:
Q  73 ataaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||| |||||||| | ||||||||||||| ||  ||||||||| ||||||||||||||||    
T  8527108 ataaaataaaggctaaagtgcacttttcgccccctatatttcaaaatgttgcgattttggcccc 8527045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 23080818 - 23080865
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgatttt 130  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  23080818 ggctaaactgcactttttgccccttaagtttcaaaatattgcgatttt 23080865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 251
Target Start/End: Original strand, 43251366 - 43251441
Alignment:
Q  177 ctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    |||||||||||| ||||||||||||||||||| | ||||||| | |||||||  ||||||||| |||||| |||||    
T  43251366 ctcttttgaccctctaacataagggaaatatgatcttttgactctttatcttctcaaaaagttacgattaagaccc 43251441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 136
Target Start/End: Complemental strand, 20636931 - 20636869
Alignment:
Q  74 taaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||| |||||||| | ||||||||||||| || |||||||||| ||||||||||| ||||    
T  20636931 taaaataaaggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgacccc 20636869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 253
Target Start/End: Original strand, 23439686 - 23439772
Alignment:
Q  168 ggaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||| | ||||||| | ||||| ||||||||||||| | |||||| || |||||||   |||||||||||||||||||||||    
T  23439686 ggaaatatgatattttgactctctaacttaagggaaatatgctcttttgatcccttatcttttaaaaaagttgcgattatgacccct 23439772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 6798094 - 6798014
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||| | ||||||||| ||||||||||| ||||||| | ||||||||| |||||||   |||||||||||||||||    
T  6798094 gggaaatatgat-ttttgaccctctaacataaggaaaatatgatcttttgaccccttatcttctaaaaaagttgcgattatg 6798014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 21690413 - 21690470
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccct 137  Q
    |||||||||||| ||||||||| ||| || |||||||||| |||| ||||||||||||    
T  21690413 ataggctaaactacacttttcgtcccctatgtttcaaaatcttgcaattttggcccct 21690470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 5087118 - 5087174
Alignment:
Q  198 agggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||| ||||||||||| |||||||  ||||||||||||||||||| ||||    
T  5087118 agggaaatatgattttttgaccccttatcttttcaaaaagttgcgattatgatccct 5087174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 24448041 - 24448093
Alignment:
Q  79 tataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttg 131  Q
    ||||||||||||| |||||||||||||  |||||| ||||| |||||||||||    
T  24448041 tataggctaaactgcacttttcgccccccaagttttaaaatgttgcgattttg 24448093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 29051714 - 29051789
Alignment:
Q  170 aaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattat 246  Q
    |||||||||| ||||||||  ||| ||||| |||| ||| |||||||||| |||||||  |||||||||||||||||    
T  29051714 aaatatgctcctttgaccca-taatataagagaaaaatgatttttgaccccttatcttctcaaaaagttgcgattat 29051789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 250
Target Start/End: Complemental strand, 33237622 - 33237542
Alignment:
Q  171 aatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgacc 250  Q
    ||||||||||||| ||||||||| ||||||| |||||| | ||||||||| ||| |||   ||||||||| ||||||||||    
T  33237622 aatatgctcttttcaccccctaaaataagggtaatatgatattttgaccccttaccttctaaaaaagttgtgattatgacc 33237542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 11843177 - 11843228
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggc 133  Q
    |||||||||| ||||| ||||||| || |||||||||| |||||||||||||    
T  11843177 aggctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggc 11843228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 134
Target Start/End: Complemental strand, 15681934 - 15681883
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcc 134  Q
    ||||||||| ||||||| | ||| ||||||||||||| ||||||||||||||    
T  15681934 ggctaaactgcacttttagacccctaagtttcaaaatgttgcgattttggcc 15681883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 23658764 - 23658831
Alignment:
Q  73 ataaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctatt 140  Q
    |||||||| ||| |||||| |||||||||  || ||||||| ||||| |||||||||||||| |||||    
T  23658764 ataaaataaaggttaaactgcacttttcgatccctaagttttaaaatgttgcgattttggcctctatt 23658831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 25003010 - 25002955
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccct 137  Q
    ||||||||||  |||||||||||| ||||||| ||||| |||||||||||| ||||    
T  25003010 aggctaaactgtacttttcgccccctaagttttaaaatgttgcgattttggtccct 25002955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 26385567 - 26385512
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||| |||||| ||||||  ||||| ||||||||||||| ||||||||||||||||    
T  26385567 taggataaactgcactttctgccccctaagtttcaaaatgttgcgattttggcccc 26385512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 10655330 - 10655384
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccct 137  Q
    ||||||||||||||||| ||||| ||||||| ||||| ||||  |||||||||||    
T  10655330 ggctaaactccactttttgccccctaagttttaaaatgttgcagttttggcccct 10655384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 17305764 - 17305822
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctatt 140  Q
    ||||||||| ||||||||| ||  ||||||||||||| |||||||||||| ||||||||    
T  17305764 ggctaaacttcacttttcgtcctctaagtttcaaaatgttgcgattttggccccctatt 17305822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 19493412 - 19493481
Alignment:
Q  168 ggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagt 237  Q
    ||||||||||| |||||| |||| ||||||||| ||||||| ||||||||||| |||||||  ||||||||    
T  19493412 ggaaatatgctattttga-ccccaaacataaggaaaatatgattttttgaccctttatcttctcaaaaagt 19493481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 253
Target Start/End: Complemental strand, 23461233 - 23461147
Alignment:
Q  168 ggaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||| | ||||||||| ||||| |||| |||||||  | |||||| || ||||| |  ||||||||||||||||||||||||    
T  23461233 ggaaatatgttattttgaccctctaacttaagagaaatattctcttttgatcctttatcatttcaaaaagttgcgattatgacccct 23461147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 27869195 - 27869249
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||| | ||||||||||||| || |||||||||| ||||||||||| ||||    
T  27869195 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgacccc 27869249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 39182238 - 39182184
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||| ||||||||||||| ||||||| ||||| |||| |||||| ||||    
T  39182238 aggctaaactgcacttttcgccccctaagtttaaaaatgttgcaattttgacccc 39182184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 42303459 - 42303401
Alignment:
Q  74 taaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg 132  Q
    |||||| ||||||||||| ||||| ||| ||| ||||||||||||  ||||||||||||    
T  42303459 taaaatttaggctaaactgcacttctcgacccctaagtttcaaaaagttgcgattttgg 42303401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 135
Target Start/End: Complemental strand, 14624905 - 14624852
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggccc 135  Q
    ||||| |||| ||||||||| ||  |||||||||||||||||||||||| ||||    
T  14624905 aggctcaactgcacttttcgtcctctaagtttcaaaattttgcgattttagccc 14624852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 3148015 - 3148095
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattat 246  Q
    |||| |||||||||||||| ||||||| |||| ||||||||| |  |||||||| ||| ||| ||||||| |||| |||||    
T  3148015 gggatatatgctcttttgatcccctaaaataatggaaatatgctcctttgaccctttaactttacaaaaaattgcaattat 3148095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 5111441 - 5111493
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcc 134  Q
    |||||||| | |||||||| |||||||||||||||||  ||| ||||||||||    
T  5111441 aggctaaagtgcacttttcaccccttaagtttcaaaaacttgtgattttggcc 5111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 6650632 - 6650688
Alignment:
Q  198 agggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||| | ||||||||| |||||||  |||||||||||||||||| |||||    
T  6650632 agggaaatatgctcttttgaccccttatcttctcaaaaagttgcgattatggcccct 6650688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 19493623 - 19493567
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||| |||||| || ||||||||| |||||||| ||||| ||||||||||| ||||    
T  19493623 ataggttaaactgcatttttcgccctttaagttttaaaatgttgcgattttgacccc 19493567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 140
Target Start/End: Complemental strand, 21810147 - 21810087
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctatt 140  Q
    |||||||||| | ||||||||||||| ||||||| ||||| ||| ||||||  ||||||||    
T  21810147 ataggctaaagtgcacttttcgccccctaagttttaaaatattgtgattttaacccctatt 21810087  T

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Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 26385261 - 26385321
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctatt 140  Q
    ||||||||||| ||||||||| ||| ||| ||||||||| ||||| |||||| ||||||||    
T  26385261 taggctaaactgcacttttcgtcccctaaatttcaaaatattgcgtttttggtcccctatt 26385321  T

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Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 48175960 - 48176016
Alignment:
Q  81 taggctaaactccactttt-cgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||||| ||||||| |||||| || |||||| ||| ||||||||||||||||    
T  48175960 taggctaaactgcactttttcgccccctatgtttcataatgttgcgattttggcccc 48176016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 4433485 - 4433309
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaatat 175  Q
    ||||||||| |||||||||||||| |||||| ||||| ||||||||||||||||||||         |||||||||||||||||       |||||||||    
T  4433485 ggctaaacttcacttttcgcccct-aagttttaaaatgttgcgattttggcccctattaaaaaaaaaggcaaaagtgaccccctatgtttagggaaatat 4433387  T
Q  176 gctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  4433386 gctcttttgaccccctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgtgattatgacccct 4433309  T

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Target: chr4; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 25011735 - 25011913
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaata 174  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| ||||        ||||||||||||||||||       ||||||||    
T  25011735 ggctaaactccacttttcgtcccctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaata 25011834  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||||||||||||||  |||||||||||||||| ||||||| ||||||||||| |||||||| ||||    
T  25011835 tgctcttttgaccccctaacataagggggatatgttttttgaccccttatctttacaaaaagttgggattatgatccct 25011913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 82 - 253
Target Start/End: Complemental strand, 13397980 - 13397801
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    |||||||||| ||||||||||||  ||||||||||||| |||| ||||||||||| ||||        ||||||||||||||||||       |||||||    
T  13397980 aggctaaacttcacttttcgccctctaagtttcaaaatattgcaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 13397881  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||||    
T  13397880 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccct 13397801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 253
Target Start/End: Original strand, 35475289 - 35475467
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggc-ccctattnnnnnnnntggcaaaagtgaccccctg-----ggaaata 174  Q
    ||||||||||| || |||||||||  ||||||| ||||| ||||||||||||| |||||||        |||||||||||||||  ||     |||||||    
T  35475289 taggctaaacttcatttttcgccctctaagttttaaaatgttgcgattttggctccctattaaaaaaaatggcaaaagtgaccctatgtttagggaaata 35475388  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  35475389 tgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagtagcgattatgacccct 35475467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 80 - 253
Target Start/End: Complemental strand, 43793937 - 43793757
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    |||||||||||||||||||| ||| | ||||||||||||| ||||||||||||||||   |        |||||||||||||||| |       ||||||    
T  43793937 ataggctaaactccactttttgccgcctaagtttcaaaatgttgcgattttggccccctattaaaaaaatggcaaaagtgaccccatatgtttagggaaa 43793838  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||| || |||||||||||||| ||||||||||    
T  43793837 tatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatatttacaaaaagttgcgaatatgacccct 43793757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 253
Target Start/End: Original strand, 55780385 - 55780564
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||||| || ||||||||||||||||||  |||| |||||||||||||||| ||||        ||||||||||||||||||       ||||||    
T  55780385 taggctaaacttcatttttcgccccttaagttttcaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaa 55780484  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  55780485 tatgctcttttgacccc-taacctaaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatgacccct 55780564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 253
Target Start/End: Original strand, 55844565 - 55844744
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||||| || ||||||||||||||||||  |||| |||||||||||||||| ||||        ||||||||||||||||||       ||||||    
T  55844565 taggctaaacttcatttttcgccccttaagttttcaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaa 55844664  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  55844665 tatgctcttttgacccc-taacctaaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatgacccct 55844744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 253
Target Start/End: Complemental strand, 9195968 - 9195790
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    |||||||||| |||||||||||||| ||| ||||||||| |||||||||||| ||||||||        || |||||||||||||||       ||||||    
T  9195968 taggctaaacaccacttttcgccccctaaatttcaaaatgttgcgattttggtcccctattaaaaaaa-tgacaaaagtgaccccctatgtttagggaaa 9195870  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  9195869 tatgctcttttgaccca-taacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgacccct 9195790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 81 - 253
Target Start/End: Complemental strand, 41877330 - 41877154
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggc-ccctattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||||| ||||||||||||  ||||||||||||| ||||||||||||| |||||||        ||||||||||||||||||       ||||||    
T  41877330 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggctccctattaaaaaa--tggcaaaagtgaccccctatgtttagggaaa 41877233  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||  |||||||||||||||||||||    
T  41877232 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttac--aaagttgcgattatgacccct 41877154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 246
Target Start/End: Complemental strand, 1588719 - 1588546
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaa 171  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||||||||| ||| | ||||        ||| |||||||||| |||       |||||    
T  1588719 ataggctaaactccacttttcgtcccttaagttttaaaatgttgcgattttcgcctcatatttaaaaaaatggaaaaagtgacctcctatgtttagggaa 1588620  T
Q  172 atatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattat 246  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  1588619 atatgctcttttgacccc-taacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattat 1588546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 83 - 247
Target Start/End: Original strand, 4357252 - 4357424
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggc-ccctattnnnnnnnntggcaaaagtgaccccct-------gggaaata 174  Q
    ||||||||| ||||||||||||  ||||||||||||| |||||||||| || |||||||        ||||||||||||| ||||       ||||||||    
T  4357252 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttagctccctattaaaaaaaatggcaaaagtgacaccctatatttagggaaata 4357351  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||||||  ||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  4357352 tgctcttttgaccttctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 4357424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 247
Target Start/End: Complemental strand, 6789263 - 6789090
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    |||||||||| |||||||||||| |||||||||||||| |||||||||||||||| | ||        ||||||||||||||||||       |||||||    
T  6789263 aggctaaacttcacttttcgccctttaagtttcaaaatgttgcgattttggccccctgttaaataaaatggcaaaagtgaccccctatgtttagggaaat 6789164  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||| ||| |||| |||||||| || |||| |||||||||||||||||||||| ||||||| |||||||||||    
T  6789163 atgctgtttcgacctcctaacatgagagaaaaatgttttttgacccgttatctttacaaaaaattgcgattatg 6789090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 5304651 - 5304479
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggccc-ctattnnnnnnnntggcaaaagtgaccccct------gggaaat 173  Q
    ||||||||||| ||||||||||||  ||||||||||||| ||||||||||| ||| |||||        ||||||||||||||||        |||||||    
T  5304651 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccctctattaaaaaaa-tggcaaaagtgacccctatgtttagggaaat 5304553  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||||||| |||||||||||| ||||||| |||||||||| ||||||| |||||||||||||||||||    
T  5304552 atgctcttttgacctcctaacataaggaaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 5304479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 19232648 - 19232469
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcc-cctattnnnnnnnntggcaaaagtgaccccct-------gggaaata 174  Q
    ||||||||||||||||| ||||| ||||||||||||| ||| |||||||| | ||||||        |||||||||||| ||| |       ||||||||    
T  19232648 ggctaaactccactttttgccccctaagtttcaaaatgttgtgattttggtcacctattaaaaaaaatggcaaaagtgatcccatatgtttagggaaata 19232549  T
Q  175 tgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||| ||||||||||||| ||||||||| |||| |||| ||||||| |||||||||||||||||||||||||    
T  19232548 tgctcttttgactccctaacataaggaaaatatgttttttttaccccttatctttacaaaaagttgcgattatgacccct 19232469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 13826631 - 13826552
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattat 246  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  13826631 gggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattat 13826552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 15059030 - 15058951
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattat 246  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  15059030 gggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattat 15058951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 27018306 - 27018392
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||||||| |||||| |||||    
T  27018306 gggaaatatgctcttttgaccccctaacaaaagggaaatatgttttttgaccccttatccttacaaaaagttgcaattatggcccct 27018392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 246
Target Start/End: Original strand, 41034633 - 41034807
Alignment:
Q  81 taggctaaactccacttttcgccccttaa-gtttcaaaattttgcgattttggcccct-attnnnnnnnntggcaaaagtgaccccct-------gggaa 171  Q
    ||||||||||| |||||||||| | |||| |||||||||| |||| |||||| ||||| |||        ||||||||||||||||||       |||||    
T  41034633 taggctaaacttcacttttcgcactttaaagtttcaaaatgttgcaattttgaccccttattaaaaaaaatggcaaaagtgaccccctatgctcagggaa 41034732  T
Q  172 atatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattat 246  Q
    ||||| |||||||||| |||||||||||||||||||| |||||||||| |||| || ||||||||||||||||||    
T  41034733 atatgatcttttgacctcctaacataagggaaatatgctttttgaccccttatttttacaaaaagttgcgattat 41034807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 45633436 - 45633613
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||||||||| ||||||||        ||||||||||||| ||||       |||||||    
T  45633436 taggctaaactacacttttcgccccctaagtttcaaaatattgcgattttgacccctattaaaaaaaatggcaaaagtgactccctatgtttagggaaat 45633535  T
Q  174 atgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    ||||||| |||||| |||||||||| ||||||||| | ||||||||| |||||||   ||||||||| |||||||||||    
T  45633536 atgctctattgaccgcctaacataa-ggaaatatgctcttttgaccccttatcttttaaaaaagttgtgattatgaccc 45633613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 83 - 247
Target Start/End: Original strand, 52838231 - 52838399
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccctg------ggaaatatg 176  Q
    ||||||||| ||||||||||||  ||||||| ||||| ||||||||||| || |||||        |||||||| |||||||||       |||||||||    
T  52838231 ggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttgacctctattaaaaaaa-tggcaaaaatgaccccctatgtttaggaaatatg 52838329  T
Q  177 ctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||||| ||||||||| |||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  52838330 ctcttttgacctcctaacatacgggaaatatgctttttgaccc-ttatctttacaaaaagttgcgattatg 52838399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 2715928 - 2715849
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||| |||||||||||| ||||||| |||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  2715928 gggaaatatgatcttttgacccc-taacatatgggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 2715849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 245
Target Start/End: Original strand, 4098747 - 4098827
Alignment:
Q  166 tgggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgatta 245  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||  ||||||||||| ||||    
T  4098747 tgggaaatatgctcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcaatta 4098827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 51291382 - 51291295
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||| ||||||||||||||||||||||||||||||| | ||||||||| |||||||  |||||||||| ||||||| |||||    
T  51291382 gggaaatatgttcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgtgattatggcccct 51291295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 244
Target Start/End: Original strand, 2931310 - 2931490
Alignment:
Q  72 tataaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggccc-ctattnnnnnnnntggcaaaagtgaccccct---- 166  Q
    |||||||||  ||||||||| ||||||||||||  ||||||| ||||| |||| |||||||  | |||||        ||| ||||||||||||||        
T  2931310 tataaaataagggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttggttctctattaaaaaaaatggtaaaagtgaccccctatgt 2931409  T
Q  167 ---gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgatt 244  Q
       ||||||||||||||||||||| | |||||||| ||||||||| |||||||||| ||||||| ||||||| ||||||||    
T  2931410 ttagggaaatatgctcttttgacctcataacataaaggaaatatgctttttgaccccttatctttacaaaaaattgcgatt 2931490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 251
Target Start/End: Complemental strand, 24626524 - 24626348
Alignment:
Q  79 tataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggccc-ctattnnnnnnnntggcaaaagtgaccccct--gggaaatat 175  Q
    ||||||||||||| ||||||| || || ||||||| ||||| |||| ||||||| || |||||        |||||||||||||||  |  |||||||||    
T  24626524 tataggctaaactgcactttttgctccctaagttttaaaatgttgcaattttggacctctattaacaaaaatggcaaaagtgacccgtttagggaaatat 24626425  T
Q  176 gctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    ||||||||||| |  |||||||||||||||||| | ||||||| | |||||||  |||||||||| |||||||||||    
T  24626424 gctcttttgactcaataacataagggaaatatgatcttttgactccttatcttctcaaaaagttgtgattatgaccc 24626348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 9397283 - 9397367
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgacc 250  Q
    |||||||||||||||||||||| ||||||||| ||||||||| |||||| |||| ||||||| |||||||||||  |||||||||    
T  9397283 gggaaatatgctcttttgaccctctaacataaaggaaatatgtttttttaaccctttatctttacaaaaagttgtcattatgacc 9397367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 251
Target Start/End: Original strand, 15795412 - 15795493
Alignment:
Q  170 aaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    |||||||||||||||| | |||||||||||||||||| | |||||||||  |||||||  |||||||||| |||||||||||    
T  15795412 aaatatgctcttttgaactcctaacataagggaaataggctttttgaccttttatcttttcaaaaagttgggattatgaccc 15795493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 23362523 - 23362609
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||| |||||||||||  |||||||||| ||||||| |||||   |  ||||||| |||||||||||||||||||||||||    
T  23362523 gggaaatatgttcttttgaccctttaacataaggaaaatatgctttttagtctcttatctttacaaaaagttgcgattatgacccct 23362609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 136
Target Start/End: Complemental strand, 18259421 - 18259362
Alignment:
Q  77 aatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||||||||| ||||||||||||  ||| ||||||||| ||||||||||||||||    
T  18259421 aatataggctaaacttcacttttcgccctctaaatttcaaaatgttgcgattttggcccc 18259362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 48908441 - 48908520
Alignment:
Q  11 cacagatacgataggagaggagtcacaatcgg--------aagatcctaccaaaattataaatctaacatataaaatata 82  Q
    |||| |||||||||||||||||||||||||||        |||||||| ||||||||||| |||||||||||||||||||    
T  48908441 cacaaatacgataggagaggagtcacaatcggaagatcgtaagatcctcccaaaattatacatctaacatataaaatata 48908520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 4433181 - 4433237
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccct 137  Q
    ||||||||||| ||||||||||||| || |||||| ||| |||||||||||||||||    
T  4433181 taggctaaactgcacttttcgccccctatgtttcataatgttgcgattttggcccct 4433237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 132
Target Start/End: Original strand, 20919332 - 20919384
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg 132  Q
    |||||||||||| ||||||||| ||| ||||||||||||| ||||||||||||    
T  20919332 ataggctaaactgcacttttcgacccctaagtttcaaaatgttgcgattttgg 20919384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 253
Target Start/End: Original strand, 15734398 - 15734576
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggccc-ctattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    |||| |||||| ||||||||| ||||||||||||||||| || |||||||||||| |||||        || |||||||||||| ||       ||||||    
T  15734398 taggttaaactacacttttcggcccttaagtttcaaaatgttacgattttggcccgctatt-aaaaaaatgacaaaagtgaccctctatgtttagggaaa 15734496  T
Q  173 tatgctcttttgaccccctaacataa-gggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||| ||||||||  ||||||||||| ||||||||||  ||||||||||| || || ||||||||||| ||| ||| |||||    
T  15734497 tatgttcttttga--ccctaacataaggggaaatatgccttttgacccgtcatgtttacaaaaagttgtgataatggcccct 15734576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 130
Target Start/End: Complemental strand, 17138587 - 17138540
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgatttt 130  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||||||    
T  17138587 ggctaaactccacttttcgccccctaagttttaaaatgttgcgatttt 17138540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 43793629 - 43793684
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||||| ||||||||||||| || |||| ||||| ||||||||||||||||    
T  43793629 taggctaaactgcacttttcgccccctatgttttaaaatgttgcgattttggcccc 43793684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 15058819 - 15058877
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctatt 140  Q
    |||||||| | ||||||| ||||| || |||||||||| ||||||||||||||||||||    
T  15058819 aggctaaagtgcacttttggccccctatgtttcaaaatgttgcgattttggcccctatt 15058877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 24626221 - 24626279
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctatt 140  Q
    |||||||||| ||||||||||||  ||||||| ||||| ||||||||||| ||||||||    
T  24626221 aggctaaactgcacttttcgccctctaagttttaaaatgttgcgattttgacccctatt 24626279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 48158688 - 48158729
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg 208  Q
    |||||||||| ||||||||||| |||||||||||||||||||    
T  48158688 gggaaatatgatcttttgaccctctaacataagggaaatatg 48158729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 55264967 - 55265024
Alignment:
Q  170 aaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatctt 227  Q
    ||||||||||||||||||| ||||| | ||| ||||||||||||| |||| |||||||    
T  55264967 aaatatgctcttttgaccctctaactttaggaaaatatgtttttttaccctttatctt 55265024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 189
Target Start/End: Complemental strand, 25618912 - 25618786
Alignment:
Q  71 atataaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttg-gcccctattnnnnnnnntggcaaaagtgaccccct--- 166  Q
    |||||||| | |||||||||| |||||| |||||  ||||||||||||| |||| ||||||  ||||||||        ||||||||||||||||||       
T  25618912 atataaaaaaaaggctaaacttcactttgcgccctctaagtttcaaaatgttgcaattttgaccccctattaagaaaaatggcaaaagtgaccccctaag 25618813  T
Q  167 ----gggaaatatgctcttttgacccc 189  Q
        |||||||||||||||||||||||    
T  25618812 tttagggaaatatgctcttttgacccc 25618786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 136
Target Start/End: Complemental strand, 8749109 - 8749051
Alignment:
Q  78 atataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||||||| |||||||  ||||||||||||   ||| ||||||||||||||||    
T  8749109 atataggctaaactacacttttgaccccttaagtttgccaatgttgcgattttggcccc 8749051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 25012039 - 25011985
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||| ||||||||||||| || |||||| ||| |||| |||||||||||    
T  25012039 aggctaaactgcacttttcgccccctatgtttcataatgttgcaattttggcccc 25011985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 9397493 - 9397440
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||| |||||||| |||| ||||||| ||||| ||| ||||||||||||    
T  9397493 ggctaaactgcacttttcaccccctaagttttaaaatgttgggattttggcccc 9397440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 16291926 - 16291885
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg 208  Q
    |||||||||||||||||||||| ||||| | |||||||||||    
T  16291926 gggaaatatgctcttttgaccctctaactttagggaaatatg 16291885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 244
Target Start/End: Complemental strand, 43336152 - 43336075
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgatt 244  Q
    |||||||||| ||||||||||  ||| | | | ||||||| | | |||||||| ||||||| ||||||||||||||||    
T  43336152 gggaaatatgttcttttgaccttctatctttatggaaataagatgtttgaccctttatctttacaaaaagttgcgatt 43336075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 45633740 - 45633687
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||| |||| |||||||||||| |||||||| ||||| |||||||||| |||||    
T  45633740 ggcttaacttcacttttcgccctttaagttttaaaatgttgcgattttagcccc 45633687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 14857642 - 14857598
Alignment:
Q  87 aaactccacttttcgccccttaagtttcaaaattttgcgattttg 131  Q
    ||||| |||||||||| |||| ||||||||||| |||||||||||    
T  14857642 aaactgcacttttcgctcctttagtttcaaaatgttgcgattttg 14857598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 15795606 - 15795570
Alignment:
Q  96 ttttcgccccttaagtttcaaaattttgcgattttgg 132  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  15795606 ttttcgcctcttaagtttcaaaatattgcgattttgg 15795570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 8e-42; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 77 - 253
Target Start/End: Complemental strand, 27853061 - 27852877
Alignment:
Q  77 aatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gg 168  Q
    ||||||||||||||| ||||||||||||  ||||||||||||| |||| ||||||||||| ||||        ||||||||||||||||||       ||    
T  27853061 aatataggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagg 27852962  T
Q  169 gaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||||    
T  27852961 gaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccct 27852877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 86 - 253
Target Start/End: Complemental strand, 23428920 - 23428745
Alignment:
Q  86 taaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaatatgc 177  Q
    |||||| || |||||||||| ||||||||||||| || | ||||||||||| ||||        ||||||||||||||||||       |||||||||||    
T  23428920 taaacttcatttttcgccccctaagtttcaaaatgttacaattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaatatgc 23428821  T
Q  178 tcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  23428820 tcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgacccct 23428745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 81 - 253
Target Start/End: Complemental strand, 26628331 - 26628151
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||||| || |||||||||  ||||||||||||| |||||||||||||||| ||||        ||||||||||||||||||       ||||||    
T  26628331 taggctaaacttcatttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaa 26628232  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||||    
T  26628231 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccct 26628151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 13080894 - 13081072
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggc-ccctattnnnnnnnntggcaaaagtgaccccct-------gggaaata 174  Q
    ||||||||| ||||||||||||  ||||||||||||| ||||||||||||| |||||||        ||||||||||||||||||       ||||||||    
T  13080894 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggctccctattaaaaaaaatggcaaaagtgaccccctatatttagggaaata 13080993  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||| | |||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||||    
T  13080994 tgctcttttgacctcataacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccct 13081072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 28173941 - 28173855
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  28173941 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgacccct 28173855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 3329117 - 3328939
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaata 174  Q
    ||||||||| ||||||||||||  ||||||||||||| |||||||||||||||| ||||        ||| ||||||||||||||       ||||||||    
T  3329117 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggaaaaagtgaccccctaagtttagggaaata 3329018  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||| ||||||| ||||||||||||||||||| |||||    
T  3329017 tgctcttttgacctcctaacataagggaaatatgccttttgaccccttatctttacaaaaagttgcgattatggcccct 3328939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 82 - 253
Target Start/End: Complemental strand, 48907596 - 48907418
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaata 174  Q
    |||||||||| ||||||||||||  ||||||||||||| ||||||||||||||||   |        ||||||||||||||||||       ||||||||    
T  48907596 aggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaatggcaaaagtgaccccctatgtttagggaaata 48907497  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||| |||||||||||||||||||| |||||||||| ||||||| | ||||||||||||||||| |||||    
T  48907496 tgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttaaaaaaagttgcgattatggcccct 48907418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 80 - 253
Target Start/End: Original strand, 25179575 - 25179756
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaa 171  Q
    |||||||||||| ||||||||||||  ||||||| ||||| |||||||||||||||| ||||        | ||||||||||||||||       |||||    
T  25179575 ataggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttggccccctattaaaaaaaatagcaaaagtgaccccctatgtttagggaa 25179674  T
Q  172 atatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  25179675 atatgctcttttgacctcctaacgtaagagaaatatgttttttgaccccttatctttacaaaaagttgcgattatggcccct 25179756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 253
Target Start/End: Original strand, 10743408 - 10743585
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaata 174  Q
    |||||||||||| ||||||||||| ||||||| ||||| ||||||||||||||||   |        || |||||||||| ||||       ||||||||    
T  10743408 aggctaaactcctcttttcgccccctaagttttaaaatgttgcgattttggccccctattaaaaaaatgacaaaagtgactccctatgtttagggaaata 10743507  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  10743508 tgctcttttaacccc-taacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgacccct 10743585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 30155357 - 30155271
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  30155357 gggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatggcccct 30155271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 82 - 253
Target Start/End: Original strand, 8542609 - 8542788
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    |||||||||| ||||||||| ||  ||||||||||||| |||| |||||| |||| ||||        ||||||||||||||||||       |||||||    
T  8542609 aggctaaacttcacttttcgtcctctaagtttcaaaatgttgcaattttgaccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 8542708  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||| |||||| |||||    
T  8542709 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccct 8542788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 87 - 253
Target Start/End: Complemental strand, 25022960 - 25022789
Alignment:
Q  87 aaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaatatgctc 179  Q
    |||| |||||||||||||  ||||||||||||| || |||||||||||| |  |        ||||||||||||||||||       |||||||||||||    
T  25022960 aaacaccacttttcgcccactaagtttcaaaatgttacgattttggccctt--tattaaaaatggcaaaagtgaccccctatgtttagggaaatatgctc 25022863  T
Q  180 ttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||| |||||||||||| ||||||||||||| || ||||||| |||||||||||||||||||||||||    
T  25022862 ttttgaccccataacataagggatatatgttttttgaacccttatctttacaaaaagttgcgattatgacccct 25022789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 253
Target Start/End: Original strand, 3780882 - 3781056
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccctg-----ggaaatatg 176  Q
    |||||||| | || |||| || || ||||||||||||| ||||||||||| ||||||||        |||||||||||||||| ||     |||||||||    
T  3780882 aggctaaaatgcattttttgctccctaagtttcaaaatgttgcgattttgacccctattaaaaaaa-tggcaaaagtgaccccatgtttagggaaatatg 3780980  T
Q  177 ctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||| |||||||||||||||||| |||||||||| ||||||| |||||||||||||| ||||||||||    
T  3780981 ctcttttgacccc-taacataagggaaatatgctttttgaccctttatctttacaaaaagttgcgaatatgacccct 3781056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 46673350 - 46673173
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaatat 175  Q
    ||||||| |||||||||||||||||||||||  |||| ||||||||||| ||||   |        |||||||||||| |||||       |||||||||    
T  46673350 ggctaaagtccacttttcgccccttaagttttcaaatgttgcgattttgaccccctattaaaaaaatggcaaaagtgatcccctatgtttagggaaatat 46673251  T
Q  176 gctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaac-aaaaagttgcgattatgacccct 253  Q
    ||||||||||| |||||||||||||||||||||| ||||||||| ||||||| || |||||||||||||||||||||||    
T  46673250 gctcttttgactccctaacataagggaaatatgt-ttttgaccccttatctttacaaaaaagttgcgattatgacccct 46673173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 246
Target Start/End: Original strand, 4521952 - 4522125
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    |||| |||||| ||||||||||||  ||||||| ||||| |||||||||||||||| ||||        | |||||||||||||| |       ||||||    
T  4521952 taggttaaacttcacttttcgccctataagttttaaaatgttgcgattttggccccctattaaaaaaagtagcaaaagtgaccccatatgtttagggaaa 4522051  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattat 246  Q
    ||||||||||||||| | |||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  4522052 tatgctcttttgacctcttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattat 4522125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 247
Target Start/End: Complemental strand, 8339244 - 8339072
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaata 174  Q
    ||||||||| ||||||||||||  ||||||||||||| |||| ||||||||||| ||||        |||||||||||||||| |       ||||||||    
T  8339244 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcaattttggccccctattaaaaaaaatggcaaaagtgaccccttatgtttagggaaata 8339145  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||| |||||||| ||||||||||  |||||||| |||||||||| ||||||| |||||||||||||||||||    
T  8339144 tgcttttttgacctcctaacataatagaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 8339072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 26633570 - 26633485
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  26633570 gggaaatatgctcttttgacccc-taacataagagaaatatgttttttgaccccttatctttacaaaaagttgcgattatggcccct 26633485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 48860794 - 48860880
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||    
T  48860794 gggaaatatgctattttgaccttctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgatccct 48860880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 28155094 - 28155014
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||  ||||||| |||||||||||||||||||    
T  28155094 gggaaatatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 28155014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 253
Target Start/End: Complemental strand, 22448050 - 22447866
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    |||| |||||| ||||||||||||  ||||||| ||||| |||| ||||||||||| ||||        |||||||||||||| |||       ||||||    
T  22448050 taggttaaactgcacttttcgccctctaagttttaaaatgttgcaattttggccccctattaaaaaatatggcaaaagtgacctcctatgtttagggaaa 22447951  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgt----tatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||| |    |||||| ||||||||||||||||||| |||||    
T  22447950 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatatatctttacaaaaagttgcgattatggcccct 22447866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 81 - 253
Target Start/End: Complemental strand, 40836484 - 40836304
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnn-tggcaaaagtgaccccctg-----ggaaat 173  Q
    ||||||||||| || |||||||||| ||||||| ||||| ||||||||||| |||| ||||         |||||||||||||||| ||     ||||||    
T  40836484 taggctaaactgcatttttcgccccctaagttttaaaatgttgcgattttgaccccctattaaaaaaaaatggcaaaagtgaccccatgtttagggaaat 40836385  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatct-taacaaaaagttgcgattatgacccct 253  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||| |||| | | | ||||||||||||||||| |||||    
T  40836384 atgttcttttgaccccctaatataagggaaatatgttttttgaccccttatatctcaaaaaaagttgcgattatggcccct 40836304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 22500804 - 22500727
Alignment:
Q  170 aaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||| || |||| || |||||||||||||||||||    
T  22500804 aaatatgctcttttgacctcctaacataagggaaatatgctttttgatcccttatatttacaaaaagttgcgattatg 22500727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 34878741 - 34878661
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||| || ||||||| |||||||||| | ||||||    
T  34878741 gggaaatatgctcttttgaccccctaatataagggaaatatgctttttgatcccttatctttacaaaaagtttcaattatg 34878661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 86 - 253
Target Start/End: Original strand, 20001714 - 20001887
Alignment:
Q  86 taaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaatatgct 178  Q
    |||||| |||||||  |||| ||||||||||||| ||||||||||| ||||||||        || |||||||||||||||       ||||||||||||    
T  20001714 taaactgcacttttaaccccctaagtttcaaaatgttgcgattttgacccctattaaaaaaagtg-caaaagtgaccccctatgtttagggaaatatgct 20001812  T
Q  179 cttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||||||||||||||||| | | |  ||| |||| ||  ||||||||||||| |||| |||||    
T  20001813 cttttgaccccctaacataagggaaatatgatctcttgccccttatattctcaaaaagttgcgactatggcccct 20001887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 26127118 - 26127038
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||| | ||||||||| |||||||| |||||||||| |||||| ||| ||||||| |||||||||||||||||||    
T  26127118 gggaaatatgttattttgaccctctaacataggggaaatatgctttttggccccttatctttacaaaaagttgcgattatg 26127038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 26177168 - 26177088
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||||| ||||||||| |||||||| |||||||||| |||||| | | ||||||| |||||||||||||||||||    
T  26177168 gggaaatatgctattttgaccctctaacataggggaaatatgctttttggctcattatctttacaaaaagttgcgattatg 26177088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 6927593 - 6927648
Alignment:
Q  198 agggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  6927593 agggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgacccct 6927648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 22416425 - 22416512
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||| ||||||||||||||||  ||||||||||| ||||||| | ||||||||| ||||||| |||||||||||| ||||||||||||    
T  22416425 gggatatatgctcttttgaccttctaacataaggtaaatatgctcttttgacccattatctttacaaaaagttgcaattatgacccct 22416512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 245
Target Start/End: Original strand, 36311150 - 36311321
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctatt-nnnnnnnntggcaaaagtgaccccct-----gggaaata 174  Q
    ||||||||||| ||||||||| ||| ||||||| ||||| ||||||||||||||||||||         |||||||||||||||| |     || |||||    
T  36311150 taggctaaactgcacttttcgtcccctaagttttaaaatgttgcgattttggcccctattaaaaaaaaatggcaaaagtgaccccatatttaggaaaata 36311249  T
Q  175 tgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgatta 245  Q
    | ||||||||||||| ||||||||||||||||||   |||| |||| |||||||  |||| |||||||||||    
T  36311250 tactcttttgaccccataacataagggaaatatgacattttaaccccttatcttctcaaatagttgcgatta 36311321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 9496429 - 9496344
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaac-aaaaagttgcgattatgaccc 251  Q
    |||||||||||||||||||||| ||||||||| ||||||||| |||||| ||| ||||||| || ||||||||||||  |||||||    
T  9496429 gggaaatatgctcttttgaccctctaacataaaggaaatatgctttttgtccccttatctttacaaaaaagttgcgaggatgaccc 9496344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 246
Target Start/End: Original strand, 25336351 - 25336527
Alignment:
Q  76 aaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-----ggga 170  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||| |||| ||||||||| ||  |        || ||||||||| ||  |     ||||    
T  25336351 aaatattggctaaactgcacttttcgccccttaaatttcaaaatgttgcaattttggcctcttattaaaaaaatgacaaaagtgaacctatatttaggga 25336450  T
Q  171 aatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattat 246  Q
    | ||||||||||||||||||||||||||||||||||||   ||||||||  ||| |||  |||||||||||||||||    
T  25336451 attatgctcttttgaccccctaacataagggaaatatgaccttttgaccttttaacttctcaaaaagttgcgattat 25336527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 33279890 - 33279713
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct------gggaaat 173  Q
    ||||||| |||  |||||||||||| ||||||| ||||| ||||||||||| |||| ||||        ||||||||||| ||| ||      || ||||    
T  33279890 taggctagactgaacttttcgccccctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtggccctcttgtttaggaaaat 33279791  T
Q  174 atgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    ||||||||||||||||||||||||||||||||||| | |||||| || |||| || || ||||||| ||||||||||||    
T  33279790 atgctcttttgaccccctaacataagggaaatatgctcttttgatcccttatatttac-aaaagttacgattatgaccc 33279713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 140
Target Start/End: Original strand, 32960633 - 32960702
Alignment:
Q  71 atataaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctatt 140  Q
    ||||||| | ||||||||||| || |||||||||| || |||||||||| |||| |||||||||||||||    
T  32960633 atataaattttaggctaaactgcatttttcgccccctatgtttcaaaatgttgcaattttggcccctatt 32960702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 32960823 - 32960774
Alignment:
Q  198 agggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  32960823 agggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 32960774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 3821004 - 3821060
Alignment:
Q  198 agggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||| | ||||||||| ||||||| |||||||||||||||||||||||||    
T  3821004 agggaaatatgctcttttgaccctttatctttacaaaaagttgcgattatgacccct 3821060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 22447738 - 22447793
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||||| ||||||||||||| || |||||||||| |||| |||||||||||    
T  22447738 taggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggcccc 22447793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 137
Target Start/End: Complemental strand, 25179884 - 25179825
Alignment:
Q  78 atataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccct 137  Q
    |||||||||||| | ||||||||||||| || |||||||||| ||||||| |||||||||    
T  25179884 atataggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgatattggcccct 25179825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 26628023 - 26628078
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||||| ||||||||||||| || |||||||||| |||| |||||||||||    
T  26628023 taggctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggcccc 26628078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 34878527 - 34878582
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||||| ||||| ||||||| || |||||||||| ||||||||||||||||    
T  34878527 taggctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggcccc 34878582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 1743344 - 1743417
Alignment:
Q  170 aaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgat 243  Q
    |||||| |||||||||||||||||||||| |||||| || | ||||||||| |||||||  ||||||||||||||    
T  1743344 aaatatactcttttgaccccctaacataa-ggaaatgtgatcttttgaccccttatcttctcaaaaagttgcgat 1743417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 20002012 - 20001959
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||| |||||||| ||||| |||||||||||| ||||||||||||||||    
T  20002012 aggctaaactgcacttttctcccct-aagtttcaaaatgttgcgattttggcccc 20001959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 3328805 - 3328866
Alignment:
Q  75 aaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||| |||||||||| ||||||||||||| || |||||||||| || | |||||||||||    
T  3328805 aaaataaaggctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggcccc 3328866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 4775942 - 4776023
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||||| |||||||||||| ||||| |||||||||| |  ||||| || |||||||   |||||||||||||||||    
T  4775942 gggaaatatgctattttgaccccctcacatacgggaaatatgatcctttgatcccttatcttcttaaaaagttgcgattatg 4776023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 210
Target Start/End: Complemental strand, 18389005 - 18388869
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctattnnnnnnnntggcaaaagtgaccccct------gggaaat 173  Q
    |||| |||||| ||| |||| |||||||||||| ||||| ||| |||||||| ||||||||        || ||||||||||||||       |||||||    
T  18389005 taggttaaactgcacctttcaccccttaagttttaaaatattgtgattttggtcccctattaaaaaaaatgacaaaagtgacccccatgttaagggaaat 18388906  T
Q  174 atgctcttttgaccccctaacataagggaaatatgtt 210  Q
    ||||||||||||||||||| ||||||  |||||||||    
T  18388905 atgctcttttgaccccctaccataagataaatatgtt 18388869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 22500592 - 22500649
Alignment:
Q  79 tataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||||||| ||||||||| ||| || |||||||||| |||| |||||||||||    
T  22500592 tataggctaaactgcacttttcggcccctatgtttcaaaatattgcaattttggcccc 22500649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 28154882 - 28154935
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||| ||||||||||||| || |||||||||| |||| |||||||||||    
T  28154882 ggctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggcccc 28154935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 32315011 - 32315088
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaata-tgttttttgacccgttatcttaacaaaaagttgcgat 243  Q
    |||||||||| ||||||||||||||||||| ||||||||| | | ||||||||| ||||||   ||||||| ||||||    
T  32315011 gggaaatatgttcttttgaccccctaacatgagggaaatattatattttgaccccttatctcctcaaaaagctgcgat 32315088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 166
Target Start/End: Complemental strand, 32960920 - 32960830
Alignment:
Q  73 ataaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctattnnnnnnnntggcaaaagtgaccccct 166  Q
    ||||||| ||||||||||| |||||||||||    |||||||||||| |||||||||||| ||||||||        ||||||||||||||||||    
T  32960920 ataaaatttaggctaaacttcacttttcgcc----aagtttcaaaatgttgcgattttggtcccctattaaaaaaaatggcaaaagtgaccccct 32960830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 1743555 - 1743495
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctatt 140  Q
    ||||||||||| |||||||||| || ||||||| ||||| |||||||||||| ||||||||    
T  1743555 taggctaaactgcacttttcgctccctaagttttaaaatgttgcgattttggtcccctatt 1743495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 46387785 - 46387745
Alignment:
Q  168 ggaaatatgctcttttgaccccctaacataagggaaatatg 208  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  46387785 ggaaacatgctcttttgatcccctaacataagggaaatatg 46387745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 28173727 - 28173782
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||| | ||||||||||||| || |||||| ||| ||||||||||||||||    
T  28173727 taggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggcccc 28173782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 140
Target Start/End: Complemental strand, 32315219 - 32315164
Alignment:
Q  85 ctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctatt 140  Q
    ||||||| ||||||||| ||||||||||| ||||| |||||||||| | |||||||    
T  32315219 ctaaactgcacttttcgtcccttaagttttaaaatgttgcgattttcgtccctatt 32315164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 243
Target Start/End: Complemental strand, 35201207 - 35201131
Alignment:
Q  166 tgggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgat 243  Q
    ||||||| ||||||||||||  ||||||||||| ||||||||| | ||||||||| |||||||  ||||||||| ||||    
T  35201207 tgggaaacatgctcttttga--ccctaacataaaggaaatatgatattttgaccccttatcttctcaaaaagttacgat 35201131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 1743254 - 1743308
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||| |||||||||| || ||||||||||||| || ||||||| |||||    
T  1743254 aggctaaactgcacttttcgcaccctaagtttcaaaatgtttcgattttagcccc 1743308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 20626751 - 20626805
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccct 137  Q
    |||||||||  |||||||| ||| ||||||||||||| || ||||||||||||||    
T  20626751 ggctaaactgtacttttcgtcccctaagtttcaaaatgttacgattttggcccct 20626805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 26633360 - 26633413
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||| ||||||||||||| ||||||| ||||| ||||||||||| ||||    
T  26633360 aggctaaactgcacttttcgcccc-taagttttaaaatgttgcgattttgacccc 26633413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 8338940 - 8338993
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||| | ||||||||||||| || |||||||||| ||||||||||| ||||    
T  8338940 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgacccc 8338993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 34296592 - 34296531
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatctt 227  Q
    |||||||||||||||||||||| ||||| | | ||||||||| | ||||||||| |||||||    
T  34296592 gggaaatatgctcttttgaccctctaactttatggaaatatgctcttttgaccctttatctt 34296531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 49657992 - 49657952
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg 208  Q
    ||||||||||||||||||| |||||||||||||| |||||||    
T  49657992 gggaaatatgctcttttga-cccctaacataaggaaaatatg 49657952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 19984846 - 19984902
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||| | |||||||| |||| ||||||||||||  |||| |||||||||||    
T  19984846 ataggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggcccc 19984902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 19986175 - 19986119
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccct 137  Q
    ||||||||| | |||||||| || ||||||||||||||  |||| ||||||||||||    
T  19986175 taggctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccct 19986119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 25022661 - 25022717
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||| | ||||||| ||||| || |||||| ||| ||||||||||||||||    
T  25022661 ataggctaaagtgcactttttgccccatatgtttcataatattgcgattttggcccc 25022717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 33279585 - 33279633
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgatttt 130  Q
    |||||||||| |||||||||||| ||||||||  |||| ||||||||||    
T  33279585 aggctaaactgcacttttcgccctttaagttttgaaatgttgcgatttt 33279633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 40836181 - 40836229
Alignment:
Q  84 gctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg 132  Q
    |||||||| ||||||||| ||| ||||||| ||||| ||||||||||||    
T  40836181 gctaaactacacttttcgtcccctaagttttaaaatgttgcgattttgg 40836229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 3e-41; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 81 - 253
Target Start/End: Complemental strand, 25557180 - 25557001
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    |||||||||||| |||||||||||| ||||||||||||| ||||||||||| ||||   |        ||||||||||||||||||       |||||||    
T  25557180 taggctaaactctacttttcgccccctaagtttcaaaatgttgcgattttgaccccctattaaaaaaatggcaaaagtgaccccctatgtttagggaaat 25557081  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| |||||    
T  25557080 atgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcaattatggcccct 25557001  T

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Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 251
Target Start/End: Original strand, 38408627 - 38408804
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| ||||        ||||||||||||||||||       | ||||    
T  38408627 taggctaaactccacttttcgtcccctaagtttcaaaatattgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagagaaa 38408726  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  38408727 tatgctcttttgaccac-taacataagggaaatatgttttttgaccccttatctttacaaaaagttgctattatgaccc 38408804  T

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Target: chr5; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 40428941 - 40428765
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct------gggaaatatg 176  Q
    ||||||||| ||||||||||||  ||||||||||||| ||||||||||| ||||||||        |||||||||| |||||        ||||||||||    
T  40428941 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgacccctattaaaaaatatggcaaaagtcacccctgtgtttagggaaatatg 40428842  T
Q  177 ctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
     |||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||| |||||||||||||||||    
T  40428841 ttcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaaattgcgattatgacccct 40428765  T

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Target: chr5; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 80 - 253
Target Start/End: Original strand, 36641140 - 36641321
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctattnnnnnnnntggcaaaagtgaccccct-------gggaa 171  Q
    |||||||||||| |||||||||||   ||||||||||||| ||| |||||||| ||||||||        |||||||||||| |||||       | |||    
T  36641140 ataggctaaacttcacttttcgccttctaagtttcaaaatattgtgattttggtcccctattaaaaaaaatggcaaaagtgagcccctatgtttagagaa 36641239  T
Q  172 atatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||| ||||    
T  36641240 atatgctcttttgacctcctaacataagggaaatatgctttttgacccgttatctttataaaaagttgcgattatgatccct 36641321  T

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Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 16901209 - 16901123
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  16901209 gggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatggcccct 16901123  T

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Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 18695004 - 18695181
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct------gggaaatat 175  Q
    ||||||||| ||||||||||||  ||||||| ||||| ||||||||||| |||| ||||        ||||||||||||||||        |||||||||    
T  18695004 ggctaaacttcacttttcgccctctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgacccctatgtttagggaaatat 18695103  T
Q  176 gctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||||    
T  18695104 gctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccct 18695181  T

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Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 31055526 - 31055440
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||    
T  31055526 gggaaatatgctcttttgaccccttaacataagggaaatatgttttttgaccccttatctttacaaaaaattgcgattatgacccct 31055440  T

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Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 253
Target Start/End: Original strand, 245594 - 245772
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct------gggaaata 174  Q
    |||| |||||| ||||||||||||  ||||||||||||| |||| |||||||||||   |        ||||||||||||||||        ||||||||    
T  245594 taggttaaacttcacttttcgccctctaagtttcaaaatattgcaattttggccccctattaaaaaaatggcaaaagtgacccctatgtttagggaaata 245693  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||||    
T  245694 tgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccct 245772  T

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Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 10379377 - 10379459
Alignment:
Q  170 aaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  10379377 aaatatgctcttttgacccc-taacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgacccct 10379459  T

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Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 253
Target Start/End: Complemental strand, 16307787 - 16307602
Alignment:
Q  77 aatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggc-ccctattnnnnnnnntggcaaaagtgaccccct-------gg 168  Q
    |||| |||||||  |||||||||||||| |||||||| ||||| |||||||||| || |||||||        | ||||||||||||||||       ||    
T  16307787 aataaaggctaaggtccacttttcgccctttaagttttaaaatgttgcgattttagctccctattaaaaaaaattgcaaaagtgaccccctatgtttagg 16307688  T
Q  169 gaaatatgctcttttgaccccc-taacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||| | ||||||| |||||||||||| ||||||||||||    
T  16307687 gaaatatgctcttttgacccccctaacataaggaaaatatgttttttgactccttatctttacaaaaagttgcaattatgacccct 16307602  T

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Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 10293300 - 10293216
Alignment:
Q  166 tgggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacc 250  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||  |||||||||||||||||||||    
T  10293300 tgggaaatatgctcttttgacctcctaacataagggaaatatgttttttgactccttatctttccaaaaagttgcgattatgacc 10293216  T

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Target: chr5; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 82 - 247
Target Start/End: Complemental strand, 26639342 - 26639169
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    |||||||||| ||||||||| ||  ||||||||||||| |||||||||||| ||||| ||        |||||||||||||||| |       |||||||    
T  26639342 aggctaaacttcacttttcgtcctctaagtttcaaaatgttgcgattttggtcccctgttaaaaaaaatggcaaaagtgaccccatatgtttagggaaat 26639243  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||||||| ||||||||||||||||||||  ||||||||| ||||||| |||||||||||| ||||||    
T  26639242 atgctcttttgacctcctaacataagggaaatatgcgttttgaccccttatctttacaaaaagttgcaattatg 26639169  T

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Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 38476682 - 38476597
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    ||||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||||||  ||||||||||||||||||||||    
T  38476682 gggaaatatgctcttttgaccccataacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatgaccc 38476597  T

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Target: chr5; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 23765602 - 23765522
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||| |  ||||||| |||||||||||||||||||    
T  23765602 gggaaatatgctcttttgacctcctaacataagggaaatatgctttttgatcatttatctttacaaaaagttgcgattatg 23765522  T

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Target: chr5; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 23815450 - 23815370
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||| |  ||||||| |||||||||||||||||||    
T  23815450 gggaaatatgctcttttgacctcctaacataagggaaatatgctttttgatcatttatctttacaaaaagttgcgattatg 23815370  T

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Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 7187281 - 7187365
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    |||||||||  ||||||||||| ||||||||||||||||||||||| |||||  |||| || |||||||||||||||||||||||    
T  7187281 gggaaatatattcttttgaccctctaacataagggaaatatgttttatgaccaattatttttacaaaaagttgcgattatgaccc 7187365  T

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Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 23040163 - 23040076
Alignment:
Q  167 gggaaatatgctcttttgacc--ccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    |||||||||||||||||||||  ||||||||||||||||||||| | ||||||||| |||||||  ||||||||||||||||||||||    
T  23040163 gggaaatatgctcttttgacctcccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatgaccc 23040076  T

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Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 17825709 - 17825623
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| ||||||||| |||||||  |||||||||||||||||| |||||    
T  17825709 gggaaatatgctcttttgacccc-taacataagagaaatatgttcttttgaccctttatcttgtcaaaaagttgcgattatggcccct 17825623  T

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Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 19169438 - 19169515
Alignment:
Q  170 aaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||| ||||||| | |||||||||||||||||| |||||||||| ||||||| |||||||||||| ||||||    
T  19169438 aaatatgctcatttgacctcttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatg 19169515  T

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Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 15885375 - 15885297
Alignment:
Q  168 ggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||| ||||||||||| | ||||||||||||||||||||| ||||||| ||||||| |||||||||| ||||||||    
T  15885375 ggaaatattctcttttgacctcttaacataagggaaatatgtttgttgaccc-ttatctttacaaaaagtttcgattatg 15885297  T

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Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 41663736 - 41663649
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||| | |||| ||  |||||| ||||||||||| |||||    
T  41663736 gggaaatatgctcttttgaccccataacataagggaaatatgattttttgactctttattttctcaaaaaattgcgattatggcccct 41663649  T

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Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 34125151 - 34125236
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |  |||||||  |||||||  ||||||||||||||||||||||    
T  34125151 gggaaatatgctcttttgatcccctaacataaggaaaatatgatcatttgacctcttatcttctcaaaaagttgcgattatgaccc 34125236  T

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Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 7835802 - 7835881
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||||||||||||||||  |||||||||| |||||||||||||||||| ||||||| ||||| || || |||||||    
T  7835802 gggaaatatgctcttttgaccca-taacataaggaaaatatgttttttgaccccttatctttacaaagaggtgggattatg 7835881  T

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Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 35302217 - 35302040
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggccc-ctattnnnnnnnntggcaaaagtgaccccct------gggaaatat 175  Q
    ||||||||| || ||||| |||||||||||||||||| ||||||||||| ||| |||||        |||||||||||||||||       |||||||||    
T  35302217 ggctaaactgcatttttctccccttaagtttcaaaatgttgcgattttgaccctctattataaaaa-tggcaaaagtgacccccatatttagggaaatat 35302119  T
Q  176 gctcttttgaccccctaacataagggaaatatg--ttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||||| | |||||||   |||||||||| |||||||   |||||| |||||||||| |||||    
T  35302118 gctcttttgaccccctaacataatgtaaatatgatctttttgaccc-ttatcttctaaaaaagctgcgattatggcccct 35302040  T

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Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 253
Target Start/End: Complemental strand, 17704795 - 17704713
Alignment:
Q  170 aaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||||||  |||||||||||||||||  |||||||||| ||||||| |||||||||||  |||||| |||||    
T  17704795 aaatatgctcttttgaccca-taacataagggaaatatactttttgaccctttatctttacaaaaagttgaaattatggcccct 17704713  T

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Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 8645796 - 8645935
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    |||||||||| ||||||||||||  | ||||||||||| ||||||||||| |||| ||||        |||||||| ||||||||        |||||||    
T  8645796 aggctaaacttcacttttcgccctcttagtttcaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaattgacccccaatgtttagggaaat 8645895  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttt 213  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  8645896 atgctcttttgacctcctaacataagggaaatatgatttt 8645935  T

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Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 86 - 253
Target Start/End: Complemental strand, 37961549 - 37961374
Alignment:
Q  86 taaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaatatgct 178  Q
    |||||| |||||||| |||| ||||||||||||| |||| |||||||| ||||||        | |||||||||| ||||        |||||||| |||    
T  37961549 taaactgcacttttcaccccctaagtttcaaaatgttgcaattttggctcctattaaaaaaaatagcaaaagtgatcccccatgtttagggaaatacgct 37961450  T
Q  179 cttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||| |||||||||||||||| ||| | ||||||||| ||| |||  ||||||||||| |||||| |||||    
T  37961449 cttttgaccgcctaacataagggaaaaatgatcttttgaccccttaacttctcaaaaagttgcaattatggcccct 37961374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 136
Target Start/End: Original strand, 31648046 - 31648109
Alignment:
Q  73 ataaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||| |||||||||||||||||||| ||| ||| ||||||||| |||||||||| |||||    
T  31648046 ataaaataaaggctaaactccacttttcgtcccataaatttcaaaatgttgcgattttcgcccc 31648109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 462885 - 462941
Alignment:
Q  195 ataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacc 250  Q
    ||||| |||||||||| ||||||||| ||||||| ||||||||||||||||||||||    
T  462885 ataagagaaatatgttcttttgaccccttatctttacaaaaagttgcgattatgacc 462941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 253
Target Start/End: Original strand, 2373240 - 2373323
Alignment:
Q  170 aaatatgctcttttgaccccctaacataagggaaatatgttttt-tgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||||||  |||||||||||||||||| | || |||||| |||| ||  |||||| |||||||||||||||||    
T  2373240 aaatatgctcttttgaccca-taacataagggaaatatgatattatgaccccttattttctcaaaaatttgcgattatgacccct 2373323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 18695309 - 18695253
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||| | ||||||||||||| || |||||||||| ||||||||||||||||    
T  18695309 ataggctaaagtgcacttttcgccccctatgtttcaaaatattgcgattttggcccc 18695253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 23765418 - 23765474
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccct 137  Q
    ||||||||||| ||||||||||||| || |||||||||| |||| ||||||||||||    
T  23765418 taggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggcccct 23765474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 23815266 - 23815322
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccct 137  Q
    ||||||||||| ||||||||||||| || |||||||||| |||| ||||||||||||    
T  23815266 taggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggcccct 23815322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 17704887 - 17704833
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||| ||||| ||||||||| ||| ||||||||||||| ||||||||||||||||    
T  17704887 aggccaaactacacttttcgtcccctaagtttcaaaatattgcgattttggcccc 17704833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 208
Target Start/End: Complemental strand, 23040347 - 23040210
Alignment:
Q  76 aaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-----ggga 170  Q
    |||||||||||||| | ||||||||  ||||||||||| ||||  ||||||||||| |||||| |         | ||||||||||||| |     ||||    
T  23040347 aaatataggctaaagtacacttttcatcccttaagttttaaaaagttgcgattttgaccccta-taaaaaaaaagacaaaagtgaccccatatttaggga 23040249  T
Q  171 aatatgctcttttga-ccccctaacataagggaaatatg 208  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  23040248 aatatgctcttttgacccccctaacataagggaaatatg 23040210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 24025020 - 24025074
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||| | |||| |||||||| ||||||||||||| ||||||||||||||||    
T  24025020 aggctaaagtgcactattcgccccctaagtttcaaaatattgcgattttggcccc 24025074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 20654100 - 20654047
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcc 134  Q
    ||||||||||| ||||||||| ||| ||||||||||||| ||| ||||||||||    
T  20654100 taggctaaactgcacttttcgacccctaagtttcaaaatgttgtgattttggcc 20654047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 31648290 - 31648237
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcc 134  Q
    ||||||||||| ||||||||| ||| || |||||||||| ||||||||||||||    
T  31648290 taggctaaactgcacttttcgtcccctatgtttcaaaatgttgcgattttggcc 31648237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 2373458 - 2373398
Alignment:
Q  74 taaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcc 134  Q
    |||||| ||||||||||| ||||||||  ||| ||||||||||||  ||||||||||||||    
T  2373458 taaaatttaggctaaactgcacttttcaacccctaagtttcaaaaagttgcgattttggcc 2373398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 7836014 - 7835962
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggc 133  Q
    ||||||||||| ||||||||||| |||| |||| ||||| |||||||||||||    
T  7836014 taggctaaactgcacttttcgcctcttatgttttaaaatattgcgattttggc 7835962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 140
Target Start/End: Original strand, 7835722 - 7835777
Alignment:
Q  85 ctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctatt 140  Q
    ||||||| ||||||||||||  ||||||| ||||| ||| ||||||||||||||||    
T  7835722 ctaaacttcacttttcgccctctaagttttaaaatgttgtgattttggcccctatt 7835777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 140
Target Start/End: Complemental strand, 8646043 - 8645996
Alignment:
Q  93 cacttttcgccccttaagtttcaaaattttgcgattttggcccctatt 140  Q
    |||||||||||||||| |||| ||||| |||||||||||||| |||||    
T  8646043 cacttttcgccccttatgttttaaaatgttgcgattttggcctctatt 8645996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 31055313 - 31055368
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||||| ||||||||||||| || |||||| ||| |||| |||||||||||    
T  31055313 taggctaaactgcacttttcgccccctatgtttcataatgttgcaattttggcccc 31055368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 3597315 - 3597377
Alignment:
Q  75 aaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccct 137  Q
    ||||||||||||||||| || |||| ||||| |||||||   ||| |||||||||||||||||    
T  3597315 aaaatataggctaaactacagttttggccccctaagtttactaatgttgcgattttggcccct 3597377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 16900996 - 16901050
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||| ||||||||||| | || |||||||||| ||||||||||| ||||    
T  16900996 aggctaaactgcacttttcgcctcctatgtttcaaaatgttgcgattttgacccc 16901050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 20653912 - 20653952
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg 208  Q
    ||||||||||||||||||| ||||||||||||| ||||||||    
T  20653912 gggaaatatgctcttttga-cccctaacataagtgaaatatg 20653952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 31576493 - 31576542
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg 132  Q
    ||||||||| ||||||||| ||| ||||||||||||| |||| |||||||    
T  31576493 ggctaaactgcacttttcgacccctaagtttcaaaatgttgcaattttgg 31576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 17704592 - 17704640
Alignment:
Q  88 aactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||| ||||||||| ||| ||||||||||| |||||||||||| |||||    
T  17704592 aactgcacttttcgtcccctaagtttcaaagttttgcgattttagcccc 17704640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 23765695 - 23765635
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctatt 140  Q
    ||||||||||| ||||||||||||  ||||||| ||||| |||| ||||||| ||||||||    
T  23765695 taggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttggccccctatt 23765635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 23815543 - 23815483
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctatt 140  Q
    ||||||||||| ||||||||||||  ||||||| ||||| |||| ||||||| ||||||||    
T  23815543 taggctaaacttcacttttcgccctctaagttttaaaatgttgcaattttggccccctatt 23815483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 140
Target Start/End: Original strand, 40428649 - 40428697
Alignment:
Q  93 cacttttcgccccttaagtttcaaaattttgcgattttgg-cccctatt 140  Q
    ||||||||||||| || |||||||||| |||||||||||| ||||||||    
T  40428649 cacttttcgccccctatgtttcaaaatgttgcgattttggtcccctatt 40428697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 82 - 247
Target Start/End: Complemental strand, 5954 - 5781
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    |||||||||| ||||||||| ||  ||||||||||||| |||||||||||||||| ||||        ||||||||||||||||||       |||||||    
T  5954 aggctaaacttcacttttcggcctctaagtttcaaaatattgcgattttggccccctatttaaaaaaatggcaaaagtgaccccctatgtttagggaaat 5855  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  5854 atgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 5781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 5647 - 5701
Alignment:
Q  80 ataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcc 134  Q
    |||||||||||| ||||||||||||| || |||||||||| || | |||||||||    
T  5647 ataggctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggcc 5701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 83 - 247
Target Start/End: Complemental strand, 30784568 - 30784396
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccct-attnnnnnnnntggcaaaagtgaccccct-------gggaaata 174  Q
    ||||||||| ||||||||||||  ||||||||||||| ||||||||||||||||| |||        |||||||||||||||| |       ||||||||    
T  30784568 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccttattaaaaaaaatggcaaaagtgaccccgtatgtttagggaaata 30784469  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  30784468 tgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 30784396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 82 - 253
Target Start/End: Complemental strand, 4519172 - 4518993
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggc-ccctattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    |||||||||| ||||||||| ||  ||||||||||||| ||||||||||||| |||||||        ||||||||||||||||||       |||||||    
T  4519172 aggctaaacttcacttttcgtcctctaagtttcaaaatgttgcgattttggctccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 4519073  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||| | ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  4519072 atgctcttttgatctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatggcccct 4518993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 82 - 252
Target Start/End: Original strand, 17648242 - 17648420
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggc-ccctattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    |||||||||| ||||||||||||  ||||||||||||| ||| ||||||||| |||||||        ||||||||||||||||||       |||||||    
T  17648242 aggctaaacttcacttttcgccctctaagtttcaaaatgttgtgattttggctccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 17648341  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccc 252  Q
    |||||||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| ||||    
T  17648342 atgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccc 17648420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 87 - 247
Target Start/End: Complemental strand, 12723561 - 12723393
Alignment:
Q  87 aaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaatatgct 178  Q
    ||||| ||||||||||||  ||||||||||||| |||||||||||||||| ||||        |||||||| |||||||||       | ||||||||||    
T  12723561 aaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaaatgaccccctatgtttagagaaatatgct 12723462  T
Q  179 cttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12723461 cttttgacctcctaacataagggaaatatgttttttgacccgttatctttacaaaaagttgcgattatg 12723393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 75 - 253
Target Start/End: Original strand, 38630047 - 38630233
Alignment:
Q  75 aaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctattnnnnnnnntggcaaaagtgaccccct------- 166  Q
    |||| ||||| |||||| || |||||||||  ||||||||||||| |||||||||||  ||||||||        ||| ||||||||| ||||           
T  38630047 aaaagataggttaaacttcatttttcgccctctaagtttcaaaatgttgcgattttgatcccctattaaaaaaaatggtaaaagtgactccctatgttta 38630146  T
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  38630147 gggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgacccct 38630233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 19391599 - 19391513
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||    
T  19391599 gggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatggcccct 19391513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 74 - 253
Target Start/End: Complemental strand, 8802712 - 8802526
Alignment:
Q  74 taaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct------ 166  Q
    |||| ||| |||||||||  |||||||||||  ||||||||||||| |||||||||||||||| ||||        ||||||||||||||| ||          
T  8802712 taaattattggctaaactttacttttcgccctctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccctctatgttt 8802613  T
Q  167 -gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
     ||||||||||||||||||||| |||||||||||||||||| | |||||||||| ||||||| ||||||||||||||||||| |||||    
T  8802612 agggaaatatgctcttttgacctcctaacataagggaaata-gctttttgaccccttatctttacaaaaagttgcgattatggcccct 8802526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 19924265 - 19924443
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccct-attnnnnnnnntggcaaaagtgaccccct-------gggaaata 174  Q
    ||||||||  ||||||||||||  ||||||| ||||| |||| |||||||||||| |||        ||||||||||||||||||       ||||||||    
T  19924265 ggctaaacctcacttttcgccctctaagttttaaaatgttgcaattttggccccttattaaaaaaaatggcaaaagtgaccccctatgtttagggaaata 19924364  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    | ||||| ||||| |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  19924365 tactcttctgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgacccct 19924443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 73 - 253
Target Start/End: Original strand, 44146962 - 44147148
Alignment:
Q  73 ataaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct----- 166  Q
    |||||||  |||||||||| ||||||||||||   |||||||||||| |||||||||||||||| ||||        ||||||||||||||||           
T  44146962 ataaaattaaggctaaacttcacttttcgccctccaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgacccctatgttt 44147061  T
Q  167 -gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
     |||||||||||| |||||||| |||||||||||||||||||| |||||||||| ||||||| || ||||||||||||||||||||||    
T  44147062 agggaaatatgctattttgacctcctaacataagggaaatatgctttttgaccccttatctttac-aaaagttgcgattatgacccct 44147148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 86 - 253
Target Start/End: Complemental strand, 5192572 - 5192397
Alignment:
Q  86 taaactccacttttcgccccttaagtttcaaaattttgcgattttggccc-ctattnnnnnnnntggcaaaagtgaccccct-------gggaaatatgc 177  Q
    |||||| ||||||||||||  ||||||| ||||| |||||||||||| || |||||        |||||||||||||| |||       |||||||||||    
T  5192572 taaacttcacttttcgccctctaagttttaaaatgttgcgattttggtcctctattaaaaaaaatggcaaaagtgacctcctatgtttagggaaatatgc 5192473  T
Q  178 tcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||| | ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| |||||    
T  5192472 tcttttgacctcttaacataagggaaatatgttttttgacctcttatctttacaaaaagttgcgattatggcccct 5192397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 253
Target Start/End: Complemental strand, 4807907 - 4807726
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattt-tggcccctattnnnnnnnntggcaaaagtgaccccc---tg-----ggaa 171  Q
    ||||||||||| |||||||||||  |||||||||||||| ||||||||| || ||||||||        | ||||||||||||||    ||     ||||    
T  4807907 taggctaaacttcacttttcgccttttaagtttcaaaatgttgcgatttatgccccctattaaaaaaaatagcaaaagtgacccctctatgtttaaggaa 4807808  T
Q  172 atatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||| |||||||||| |||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||||    
T  4807807 atatgttcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccct 4807726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 242
Target Start/End: Complemental strand, 22452479 - 22452310
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctattnnnnnnnntggcaaaagtgaccccct-------gggaaa 172  Q
    ||||||||||||||||||| ||||| ||| ||||||||| |||||||||||| ||||||||         ||||||||||||| | |       ||||||    
T  22452479 taggctaaactccacttttagccccctaaatttcaaaatattgcgattttggtcccctattaaaaaaaacggcaaaagtgacctcatatatttagggaaa 22452380  T
Q  173 tatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcga 242  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||  ||||||| ||||||||||||||    
T  22452379 tatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcga 22452310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 33895466 - 33895546
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||    
T  33895466 gggaaatatgctcttttgacctcctaacataagggaaatatgttttttaaccccttatctttacaaaaagttgcaattatg 33895546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 83 - 253
Target Start/End: Complemental strand, 21666577 - 21666400
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaatat 175  Q
    |||| |||| ||||||| ||||| | ||||||||||| ||||||||||||||||   |        |||||||||||||||||        |||||||||    
T  21666577 ggctgaactgcactttttgcccccttagtttcaaaatgttgcgattttggccccctattaaaaaaatggcaaaagtgaccccccatgtttagggaaatat 21666478  T
Q  176 gctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| | | |||||||| |||||| |||||    
T  21666477 gctctcttgaccccctaacataagggaaatatgttttttgaccccttatctttagataaagttgcaattatggcccct 21666400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 32400532 - 32400448
Alignment:
Q  169 gaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||| ||||||||||||||||||||||||||||||  ||||||||  ||||||| |||||||||||| ||||||||||||    
T  32400532 gaaatatgcgcttttgaccccctaacataagggaaatatgccttttgaccatttatctttacaaaaagttgcaattatgacccct 32400448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 247
Target Start/End: Complemental strand, 7117429 - 7117246
Alignment:
Q  71 atataaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcc-cctattnnnnnnnntggcaaaagtgaccccctgg- 168  Q
    ||||||| | ||||||||||| ||||| || || ||||||||||||||  ||||||||||| || ||||||        |||||||||||||||| ||      
T  7117429 atataaattttaggctaaactgcacttatcaccacttaagtttcaaaaagttgcgattttgaccacctattaaaaaaaatggcaaaagtgaccccatgtt 7117330  T
Q  169 ----gaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
        |||||||||||||||||||| |||||| ||||| ||| |||| |||| |||| ||||||| |||||||||||| ||||||    
T  7117329 tagagaaatatgctcttttgacccactaacagaaggggaatgtgttcttttaaccccttatctttacaaaaagttgcaattatg 7117246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 3208072 - 3208156
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    |||||||||| |||||||||||| |||||||||||||||||| | ||||||||| |||||||   |||||||||||||||||||||    
T  3208072 gggaaatatgttcttttgacccc-taacataagggaaatatgatattttgaccccttatcttcttaaaaagttgcgattatgaccc 3208156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 21930107 - 21929967
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct------gggaaata 174  Q
    ||||||||||| ||||||||||||  ||||||||||||| ||||||||||| ||||   |        ||||||||||||||||        ||||||||    
T  21930107 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgaccccctattaaaaaaatggcaaaagtgacccctatgtttagggaaata 21930008  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttg 215  Q
    ||||||||||||| |||||||||||||||||||| ||||||    
T  21930007 tgctcttttgacctcctaacataagggaaatatgctttttg 21929967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 18881716 - 18881629
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||| |||||| |  ||||||||||||||||| | | ||||||||| ||||||| |||||||||||| ||||||||||||    
T  18881716 gggaaatatgctattttgagcttctaacataagggaaatacgctcttttgaccccttatctttacaaaaagttgcaattatgacccct 18881629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 3380293 - 3380363
Alignment:
Q  170 aaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgc 240  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||||||||  ||||||  ||||||||||||    
T  3380293 aaatatgctcttttgtccctctagcataagggaaatatgttttttgacctcttatctctacaaaaagttgc 3380363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 19392872 - 19392817
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||||| ||||||||||||  ||||||||||||| ||||||||||||||||    
T  19392872 taggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggcccc 19392817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 251
Target Start/End: Complemental strand, 41688321 - 41688238
Alignment:
Q  169 gaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    |||||||| |||||||||||| |||||||||  |||| || | ||||||||| |||||||  ||||||||||||||||||||||    
T  41688321 gaaatatgttcttttgaccccttaacataagaaaaatctgatattttgaccccttatcttctcaaaaagttgcgattatgaccc 41688238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 41385700 - 41385622
Alignment:
Q  170 aaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||| |||||||||| | ||||||||||||||||||| ||||||||||| ||||| |  |||||||||| |||||||    
T  41385700 aaatatactcttttgactctctaacataagggaaatatgattttttgaccccttatcatctcaaaaagttgtgattatg 41385622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 4423242 - 4423157
Alignment:
Q  168 ggaaatatgctcttttgaccccc-taacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    ||||||||| |||||| ||| || |||||||||||||||||| | ||||||||| |||||||  |||||| |||||||||||||||    
T  4423242 ggaaatatgttcttttaacctccataacataagggaaatatgatcttttgaccccttatcttttcaaaaaattgcgattatgaccc 4423157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 18253098 - 18253018
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||| | |||||||||  |||||||||||||||||| ||||||||||| |||||||  |||||||||| |||||||    
T  18253098 gggaaatatgtttttttgaccca-taacataagggaaatatgattttttgaccccttatcttctcaaaaagttgtgattatg 18253018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 23565214 - 23565261
Alignment:
Q  200 ggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  23565214 ggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 23565261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 44147276 - 44147221
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||| | ||||||||||||| || |||||||||| ||||||||||||||||    
T  44147276 taggctaaagtgcacttttcgccccatatgtttcaaaatattgcgattttggcccc 44147221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 5192271 - 5192325
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||| ||||||||||||| || |||||||||| |||| |||||||||||    
T  5192271 aggctaaacttcacttttcgccccctatgtttcaaaatgttgcaattttggcccc 5192325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 4807596 - 4807653
Alignment:
Q  79 tataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||||||| ||||||||||| | || |||||||||| |||| |||||||||||    
T  4807596 tataggctaaactgcacttttcgcctcctatgtttcaaaatgttgcaattttggcccc 4807653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 7116393 - 7116453
Alignment:
Q  73 ataaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggc 133  Q
    ||||||| |||||||||||  |||||| |||||||||||||  |||| |||||||||||||    
T  7116393 ataaaatttaggctaaactgaactttttgccccttaagttttgaaatgttgcgattttggc 7116453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 15869639 - 15869580
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctatt 140  Q
    ||||||||||| ||||||| || || ||||||||||||| ||| |||||| |||||||||    
T  15869639 taggctaaactgcacttttggctccctaagtttcaaaatgttgtgattttagcccctatt 15869580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 18881502 - 18881557
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||||| | ||||||| |||||||||||  |||| ||||||||||||||||    
T  18881502 taggctaaactgcgcttttcgacccttaagttttgaaatgttgcgattttggcccc 18881557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 19391383 - 19391445
Alignment:
Q  78 atataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctatt 140  Q
    |||||||||||||| ||||||||||||| || |||||||||| |||| ||||||| ||||||||    
T  19391383 atataggctaaactgcacttttcgcccc-tatgtttcaaaatgttgcaattttggtcccctatt 19391445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 23565119 - 23565174
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||||  ||||||||||||||| |||||||||| |||| |||||| ||||    
T  23565119 taggctaaactagacttttcgccccttatgtttcaaaatgttgcaattttgacccc 23565174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 133
Target Start/End: Original strand, 3380199 - 3380249
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggc 133  Q
    ||||||||| || ||||| ||| |||||||||||||| |||||||||||||    
T  3380199 ggctaaactgcatttttcaccctttaagtttcaaaatgttgcgattttggc 3380249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 3819507 - 3819545
Alignment:
Q  102 ccccttaagtttcaaaattttgcgattttggcccctatt 140  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  3819507 ccccttaagtttcaaaatgttgcaattttggcccctatt 3819545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 31268371 - 31268451
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatga 248  Q
    |||||||||||||||||| |||| ||||||||||| |||||| | ||| ||||| ||||||| | ||||||||| ||||||||    
T  31268371 gggaaatatgctcttttg-ccccataacataaggg-aatatgctctttagaccctttatctttataaaaagttgtgattatga 31268451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 1824697 - 1824737
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg 208  Q
    ||||||||||||||||||| |||||||||||||| |||||||    
T  1824697 gggaaatatgctcttttga-cccctaacataaggaaaatatg 1824737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 1859142 - 1859182
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg 208  Q
    ||||||||||||||||||| |||||||||||||| |||||||    
T  1859142 gggaaatatgctcttttga-cccctaacataaggaaaatatg 1859182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 10007868 - 10007811
Alignment:
Q  79 tataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||||| | |||||||| |||||||| ||||||||  |||| |||||||||||    
T  10007868 tataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggcccc 10007811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 21666273 - 21666321
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgatttt 130  Q
    |||||||||| ||||||||| |||||||||||| |||| ||| ||||||    
T  21666273 aggctaaactgcacttttcgtcccttaagtttcgaaatgttgtgatttt 21666321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1202 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 2079 - 1902
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    |||| |||||| |||||||| |||  ||||||||||||| |||||||||||  |||| ||        ||||||||||||||||||       |||||||    
T  2079 taggttaaacttcacttttcaccctctaagtttcaaaatgttgcgattttgatcccttttaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 1980  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||    
T  1979 atgctattttgaccccctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccc 1902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 74; Significance: 5e-34; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 82 - 253
Target Start/End: Original strand, 61813 - 61992
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaat 173  Q
    |||||||||| |||||||||||   ||||||||||||| |||||||||||||||| ||||        ||||||||||||||||||       |||||||    
T  61813 aggctaaacttcacttttcgccttctaagtttcaaaatgttgcgattttggccccctattaaaaaaaatggcaaaagtgaccccctatgtttagggaaat 61912  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||  |||||||||||||||||||| |||||||||| ||||||| |||||||||||| |||||| |||||    
T  61913 atgctcttttgacatcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggcccct 61992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 253
Target Start/End: Original strand, 19285 - 19460
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct------gggaaatatg 176  Q
    |||||||||| |||||||||| | ||||||||||||| ||||||||||| ||||   |        ||||||||||||||||        ||||||||||    
T  19285 ggctaaactctacttttcgcctcctaagtttcaaaatgttgcgattttgaccccctattaaaaaaatggcaaaagtgacccctatgtttagggaaatatg 19384  T
Q  177 ctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||||| |||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||| |||||    
T  19385 ctcttttgacccc-taacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccct 19460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 19585 - 19532
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||| || |||||||||||||||||||||| | || |||||||||||||    
T  19585 ggctaaactgcatttttcgccccttaagtttcaaactgtttcgattttggcccc 19532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 246
Target Start/End: Original strand, 1997 - 2162
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-gggaaatatgctct 180  Q
    |||||||||  |||||||||||  ||||||| ||||| ||||||||||| |||| ||||        |||||||||||||||| | ||||||||||||||    
T  1997 ggctaaactttacttttcgccctctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatggcaaaagtgaccccttagggaaatatgctct 2096  T
Q  181 tttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattat 246  Q
    ||||||| |||||||||||||||| ||| ||||||||||  |||||| ||||||||||||||||||    
T  2097 tttgacctcctaacataagggaaacatgctttttgaccccatatctttacaaaaagttgcgattat 2162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 85 - 246
Target Start/End: Complemental strand, 3866 - 3701
Alignment:
Q  85 ctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccctg-----ggaaatatgctc 179  Q
    ||||||| ||||||| || || ||||||||||||| ||| ||||||| ||||||||        |||||||||||||||| ||     ||||||||||||    
T  3866 ctaaactgcactttttgctccataagtttcaaaatattgtgattttgacccctattaaaaaaa-tggcaaaagtgaccccatgtttagggaaatatgctc 3768  T
Q  180 ttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattat 246  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||| |||||||    
T  3767 ttttgaccccctaacataagggaaatatgctttttgaccccttatctttacaaaaagtttcgattat 3701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 79 - 253
Target Start/End: Complemental strand, 2355 - 2175
Alignment:
Q  79 tataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctattnnnnnnnntggcaaaagtgaccccct-------gggaa 171  Q
    ||||||||||| |||||||||||||   ||||||| |||| || ||||||||||||||   |        ||||||||||||||||||       |||||    
T  2355 tataggctaaagtccacttttcgccttctaagttttaaaagtt-gcgattttggccccctattaaaaaaatggcaaaagtgaccccctatgtttagggaa 2257  T
Q  172 atatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||| ||||||||||||| |||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  2256 atatgctcttttgacctcctaacataagggcaatatgctttttgaccccttatctttacaaaaagttgcgattatgacccct 2175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 136
Target Start/End: Original strand, 2047 - 2101
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||||| ||||||||||||| || |||| ||||| |||| |||||||||||    
T  2047 aggctaaactgcacttttcgccccctatgttttaaaatgttgcaattttggcccc 2101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 247
Target Start/End: Complemental strand, 3264 - 3092
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc-tattnnnnnnnntggcaaaagtgaccccct-------gggaaata 174  Q
    ||||||||  ||||||||||||  ||||||||||||| |||| |||||| |||| ||||        |||||||||||||| |||       ||||||||    
T  3264 ggctaaacctcacttttcgccctctaagtttcaaaatgttgcaattttgaccccctattaaaaaaaatggcaaaagtgacctcctatgtttagggaaata 3165  T
Q  175 tgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||| ||||||    
T  3164 tgctcttttgacctcctaacataagggaaatatgttttttgacctcttatctttacaaaaagttgcaattatg 3092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 2961 - 3014
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||| | ||||||||||||| || |||||||||| ||||||||||||||||    
T  2961 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggcccc 3014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 66266 - 66352
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||| |||||||| ||||||||||||||| |||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  66266 gggaaatatgctattttgacctcctaacataagggaactatgctttttgaccccttatctttacaaaaagttgcgattatgacccct 66352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 66478 - 66420
Alignment:
Q  82 aggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccctatt 140  Q
    |||||||||| ||||||||||||| || |||||||||| |||  |||||||||||||||    
T  66478 aggctaaactgcacttttcgccccctatgtttcaaaatgttgtaattttggcccctatt 66420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 142252 - 142079
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttgg-cccctattnnnnnnnntggcaaaagtgaccccct------gggaaat 173  Q
    |||| |||||| ||||||||||||  ||||||| ||||| |||| ||||||| ||||||||        ||||||||||||||||        |||||||    
T  142252 taggttaaacttcacttttcgccctctaagttttaaaatgttgcaattttggtcccctattaaaaaaaatggcaaaagtgacccctatgtttagggaaat 142153  T
Q  174 atgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||||||| |||||||||||||||||||| |||||||||  ||||||| |||||||||||||||||||    
T  142152 atgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatg 142079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 25176 - 25090
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |  |||||||| ||||||| |||||    
T  25176 gggaaatatgctcttttgaccccctaacataagggaaatatgctttttgaccccttatctttaacaaaagttgtgattatggcccct 25090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 5923 - 6007
Alignment:
Q  167 gggaaatatgctcttttgacccc-ctaacataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacc 250  Q
    |||||||||||| |||||||||| ||||||||||||||||||| |||||||||| ||||||| | ||||||||||||||||||||    
T  5923 gggaaatatgctattttgacccccctaacataagggaaatatgctttttgaccccttatctttataaaaagttgcgattatgacc 6007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 170 - 251
Target Start/End: Original strand, 455121 - 455203
Alignment:
Q  170 aaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgaccc 251  Q
    ||||||| |||||| |||||||||||||||||||||||| | ||||||||| |||||||  | ||||||||||||||||||||    
T  455121 aaatatgttcttttaaccccctaacataagggaaatatgatcttttgaccccttatcttctctaaaagttgcgattatgaccc 455203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 455022 - 455108
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatgacccc 252  Q
    ||||||||||||||||| |||||||||||||| ||||||| | | ||||||||| |||||||  | |||||||  ||||||||||||    
T  455022 gggaaatatgctcttttaaccccctaacataaaggaaatacgatcttttgaccccttatcttctctaaaagttttgattatgacccc 455108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 455331 - 455279
Alignment:
Q  84 gctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    |||||||| |||||||||  || ||||||||||||| ||||||||||||||||    
T  455331 gctaaactgcacttttcgaaccctaagtttcaaaatgttgcgattttggcccc 455279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 969 - 882
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||| ||||||| ||||||||  ||||||||||| ||||||| | ||||||||| ||||||| |||||||||||| ||||||||||||    
T  969 gggatatatgctattttgaccttctaacataaggtaaatatgctcttttgaccccttatctttacaaaaagttgcaattatgacccct 882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 754 - 809
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||||| |||||||| ||||||||||||| |||| ||||||||||||||||    
T  754 taggctaaactgcacttttcaccccttaagtttcgaaatgttgcgattttggcccc 809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 250703 - 250644
Alignment:
Q  194 cataagggaaatatgttttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| |||||    
T  250703 cataagggaaatatgttttttgaccccttatctttacaaaaagttgtgattatggcccct 250644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 29808 - 29888
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||||||||| |||||| |||||||||||||||||| | ||||||||| |||||||  ||||||||||| ||||||    
T  29808 gggaaatatgctctttggacccc-taacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcaattatg 29888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 29991 - 29937
Alignment:
Q  83 ggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccct 137  Q
    ||||||||| ||||||| | ||||||||||| ||||| |||| ||||||||||||    
T  29991 ggctaaactacactttttgtcccttaagttttaaaatgttgcaattttggcccct 29937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 3121 - 3055
Alignment:
Q  187 cccctaacataagggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacccc 252  Q
    |||||||||||||| ||||||| | ||||||||| |||| || ||||||||||||||||||||||||    
T  3121 cccctaacataaggtaaatatgctattttgaccccttatttttacaaaaagttgcgattatgacccc 3055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 112218 - 112299
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattatg 247  Q
    |||||||||||  |||||||| |||||||||||||||||||| | ||||||| | |||||||  |||||||||||| |||||    
T  112218 gggaaatatgcctttttgacctcctaacataagggaaatatgatcttttgactccttatcttctcaaaaagttgcggttatg 112299  T

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Target: scaffold0291 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 10013 - 10092
Alignment:
Q  167 gggaaatatgctcttttgaccccctaacataagggaaatatg-ttttttgacccgttatcttaacaaaaagttgcgattat 246  Q
    ||||||||||||||||||| ||| |||||||||| ||||||| | ||| ||||| |||||||  |||||||||||||||||    
T  10013 gggaaatatgctcttttga-cccataacataaggaaaatatgatctttagaccccttatcttctcaaaaagttgcgattat 10092  T

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Target: scaffold0683 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 5288 - 5343
Alignment:
Q  81 taggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||||||| ||||| |||||| ||| |||||||||| |||| |||||||||||    
T  5288 taggctaaactacacttctcgccctttatgtttcaaaatgttgcaattttggcccc 5343  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 43815 - 43877
Alignment:
Q  74 taaaatataggctaaactccacttttcgccccttaagtttcaaaattttgcgattttggcccc 136  Q
    ||||||| ||| |||||| ||||||||||| | ||||||||||||| || | |||||||||||    
T  43815 taaaataaaggttaaactgcacttttcgcctcctaagtttcaaaatgtttcaattttggcccc 43877  T

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Target: scaffold0171 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 252
Target Start/End: Original strand, 9168 - 9209
Alignment:
Q  211 ttttgacccgttatcttaacaaaaagttgcgattatgacccc 252  Q
    ||||||||| |||||||  |||||||||||||||||||||||    
T  9168 ttttgacccattatcttttcaaaaagttgcgattatgacccc 9209  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 54492 - 54548
Alignment:
Q  198 agggaaatatgtt-ttttgacccgttatcttaacaaaaagttgcgattatgacccct 253  Q
    ||||||||||| | ||||| ||| ||||||| ||||||||||||||||||| |||||    
T  54492 agggaaatatgctcttttggccccttatctttacaaaaagttgcgattatggcccct 54548  T

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