View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17680_high_16 (Length: 205)
Name: NF17680_high_16
Description: NF17680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17680_high_16 |
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Alignment Details
Target: chr4 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 18 - 191
Target Start/End: Complemental strand, 26914860 - 26914687
Alignment:
| Q |
18 |
caaaaatgacataagacaatattatatagttatattctcccatgataaagcattcgtacatagtagggcaaaaagctactaaacctagcaagttcaaaca |
117 |
Q |
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| T |
26914860 |
caaaaatggcataagacaatattatatagttatattctcccatgataaagcattcgtacatagtagggcaaaaagctactaaacctagcaagttcaaaca |
26914761 |
T |
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| Q |
118 |
aacatcataatcaaatttcattacgaacacaaacatcatagaaaagactaaaccgaaccaaaccctcattcatc |
191 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26914760 |
aacatcataatcaaatttcattacgaacacaaacatcatagaaaagactaaaccgaaccaaaccctcattcatc |
26914687 |
T |
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