View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17680_low_20 (Length: 203)
Name: NF17680_low_20
Description: NF17680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17680_low_20 |
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Alignment Details
Target: chr6 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 13 - 182
Target Start/End: Original strand, 25210223 - 25210392
Alignment:
| Q |
13 |
aagaatatgaaggaccacgttatgcaataaaatatataaagaataaagagcaccaccagacaaccaagagcacgttttctaacataagttttgtaaccaa |
112 |
Q |
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| T |
25210223 |
aagaaaatgaaggaccacgttatgcaataaaatatataaagaataaagagcaccaccaaacaaccaagagcacgttttctaacataagttttgtaaccaa |
25210322 |
T |
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| Q |
113 |
ccatctaacccaaaaaataaagcatttactatttataatttattattataagcaagaaatgtgtctcaca |
182 |
Q |
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|||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
25210323 |
ccatctaaccaaaaaaatatagcatttacaatttataatttattattataagcaagaaatgtgtctcaca |
25210392 |
T |
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