View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17681_high_8 (Length: 365)
Name: NF17681_high_8
Description: NF17681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17681_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 15 - 350
Target Start/End: Complemental strand, 38013894 - 38013563
Alignment:
| Q |
15 |
aaataaaaatctagttggtaaaatgaattaaaatagagagtacttagaagatagcaaacgaaccttaggataagaatatagaaagatataccaccatgcg |
114 |
Q |
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| T |
38013894 |
aaataaaaatctagttagtaaaatgaattaaaatagagagta-----------gcaaacgaaccttaggataagaatatagaaagatataccaccatgcg |
38013806 |
T |
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| Q |
115 |
aatatgagtaaggatatagctgaagtaacaaagatagagttgaaaattaaccagctaatggaaattattgaaaccccagttagcgtaattgtccatggct |
214 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38013805 |
aatatgagtaaggatatagctgaagttacaaagatagagttgaaaattaaccagctaatggaaattattgaaaccccagttagcgtaattgtccatggct |
38013706 |
T |
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| Q |
215 |
gacacctaaaa----------caaatacatcaaatttagttctaaaaattgaagaaaatgattaaggaatgaagatgaaccataccaagatggtttggtg |
304 |
Q |
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||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
38013705 |
gacacctaaaacaaaacatgacaaatacatcaaatttagttctaaaaatt---gaaaatgattaagtaatgaagatgaaccataccaagatggtttggtg |
38013609 |
T |
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| Q |
305 |
tcccaaacagattcgtattcgagggaaaggttgttgaggtaaccgt |
350 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38013608 |
tcccaaacagattcgtattcgagggaaaggttgttgaggtaaccgt |
38013563 |
T |
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