View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17681_low_34 (Length: 235)

Name: NF17681_low_34
Description: NF17681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17681_low_34
NF17681_low_34
[»] chr7 (35 HSPs)
chr7 (21-235)||(34487100-34487314)
chr7 (69-235)||(42516873-42517039)
chr7 (69-235)||(13426503-13426669)
chr7 (69-235)||(34595530-34595696)
chr7 (57-235)||(44219505-44219683)
chr7 (59-235)||(19157691-19157865)
chr7 (59-235)||(20757090-20757264)
chr7 (69-235)||(44483235-44483402)
chr7 (69-223)||(22364874-22365028)
chr7 (69-235)||(35026451-35026616)
chr7 (72-235)||(24567-24732)
chr7 (128-235)||(40729128-40729235)
chr7 (60-235)||(19476390-19476566)
chr7 (59-235)||(31579642-31579819)
chr7 (71-201)||(22954576-22954706)
chr7 (126-232)||(19476608-19476714)
chr7 (59-232)||(19157907-19158080)
chr7 (59-232)||(20757306-20757479)
chr7 (59-232)||(35026658-35026830)
chr7 (80-232)||(42517081-42517233)
chr7 (69-232)||(24362-24525)
chr7 (58-232)||(40729277-40729451)
chr7 (69-232)||(44219300-44219463)
chr7 (74-231)||(44483441-44483598)
chr7 (69-232)||(34595324-34595488)
chr7 (126-232)||(22954403-22954509)
chr7 (74-232)||(22364668-22364822)
chr7 (126-201)||(829926-830001)
chr7 (126-201)||(1195106-1195181)
chr7 (130-232)||(31579498-31579600)
chr7 (126-232)||(34487356-34487462)
chr7 (59-109)||(40729088-40729138)
chr7 (74-167)||(827110-827202)
chr7 (74-167)||(829121-829213)
chr7 (144-188)||(46101435-46101479)
[»] chr4 (48 HSPs)
chr4 (69-235)||(2184605-2184772)
chr4 (59-235)||(989286-989462)
chr4 (55-235)||(22487212-22487392)
chr4 (60-235)||(5720950-5721124)
chr4 (60-235)||(43749944-43750119)
chr4 (60-235)||(13683001-13683176)
chr4 (69-235)||(37815347-37815513)
chr4 (55-235)||(17107424-17107604)
chr4 (69-235)||(11021679-11021845)
chr4 (69-235)||(46081585-46081751)
chr4 (60-235)||(16959975-16960150)
chr4 (59-235)||(9301780-9301955)
chr4 (69-235)||(39385372-39385539)
chr4 (69-235)||(26314686-26314852)
chr4 (59-235)||(16491643-16491819)
chr4 (99-235)||(17865012-17865148)
chr4 (60-235)||(4712176-4712350)
chr4 (59-232)||(4712392-4712564)
chr4 (128-235)||(46480982-46481089)
chr4 (69-235)||(32592954-32593116)
chr4 (60-230)||(13493100-13493271)
chr4 (69-232)||(17865190-17865353)
chr4 (134-235)||(12792783-12792884)
chr4 (74-232)||(32592754-32592912)
chr4 (58-232)||(17107646-17107819)
chr4 (59-232)||(37815555-37815729)
chr4 (69-232)||(13492890-13493053)
chr4 (69-232)||(16959769-16959933)
chr4 (57-232)||(16491861-16492035)
chr4 (74-228)||(26314487-26314640)
chr4 (134-232)||(43750161-43750259)
chr4 (86-201)||(12792595-12792710)
chr4 (126-232)||(22487434-22487540)
chr4 (69-232)||(989083-989244)
chr4 (69-232)||(11021887-11022050)
chr4 (74-232)||(13683218-13683369)
chr4 (143-235)||(20045882-20045974)
chr4 (128-201)||(2184460-2184532)
chr4 (144-232)||(46481131-46481219)
chr4 (117-232)||(9301624-9301739)
chr4 (133-218)||(6100534-6100619)
chr4 (60-141)||(17864944-17865025)
chr4 (134-232)||(20046016-20046114)
chr4 (56-149)||(42239370-42239463)
chr4 (145-232)||(5721166-5721254)
chr4 (60-163)||(39385179-39385282)
chr4 (74-175)||(46081437-46081537)
chr4 (59-109)||(46480942-46480992)
[»] chr3 (37 HSPs)
chr3 (59-235)||(27934447-27934623)
chr3 (69-235)||(38807544-38807710)
chr3 (69-235)||(52835551-52835717)
chr3 (69-222)||(27284976-27285129)
chr3 (60-235)||(29838505-29838680)
chr3 (60-235)||(46962793-46962968)
chr3 (60-235)||(49499840-49500015)
chr3 (69-235)||(16056355-16056520)
chr3 (69-235)||(26582823-26582989)
chr3 (69-235)||(50645478-50645644)
chr3 (69-235)||(14546047-14546213)
chr3 (60-235)||(33162531-33162706)
chr3 (69-235)||(7029391-7029557)
chr3 (69-235)||(32315587-32315752)
chr3 (69-235)||(42093606-42093771)
chr3 (59-235)||(55092201-55092379)
chr3 (69-235)||(49121721-49121888)
chr3 (69-232)||(21323101-21323265)
chr3 (58-232)||(17109846-17110020)
chr3 (74-232)||(32315387-32315545)
chr3 (49-232)||(49500057-49500240)
chr3 (58-232)||(55092421-55092595)
chr3 (59-232)||(50645686-50645859)
chr3 (59-231)||(42093391-42093563)
chr3 (69-235)||(17110062-17110228)
chr3 (69-232)||(29838300-29838463)
chr3 (59-201)||(46962578-46962720)
chr3 (69-232)||(52835759-52835922)
chr3 (74-201)||(14545846-14545974)
chr3 (85-232)||(26582635-26582781)
chr3 (59-201)||(27934696-27934838)
chr3 (69-232)||(38807752-38807915)
chr3 (117-232)||(889182-889297)
chr3 (130-232)||(33162387-33162489)
chr3 (125-232)||(27285183-27285290)
chr3 (60-157)||(19590435-19590532)
chr3 (126-230)||(51182065-51182170)
[»] chr1 (36 HSPs)
chr1 (59-235)||(20062009-20062185)
chr1 (60-235)||(50624763-50624938)
chr1 (60-235)||(14602007-14602182)
chr1 (60-235)||(26244546-26244721)
chr1 (60-235)||(28031644-28031819)
chr1 (60-235)||(33619107-33619282)
chr1 (69-235)||(50096139-50096305)
chr1 (80-235)||(33574-33729)
chr1 (71-231)||(18963617-18963777)
chr1 (74-235)||(39288365-39288527)
chr1 (58-235)||(43191867-43192044)
chr1 (60-235)||(12322089-12322264)
chr1 (69-235)||(10913781-10913946)
chr1 (58-235)||(47828958-47829134)
chr1 (69-235)||(37172459-37172625)
chr1 (128-235)||(42154815-42154922)
chr1 (74-232)||(50096347-50096505)
chr1 (59-232)||(20061794-20061967)
chr1 (59-232)||(28031861-28032034)
chr1 (58-233)||(42154963-42155137)
chr1 (82-232)||(26244763-26244913)
chr1 (69-232)||(43191662-43191825)
chr1 (92-232)||(10913988-10914128)
chr1 (86-232)||(33771-33917)
chr1 (59-232)||(37172244-37172417)
chr1 (60-232)||(50624980-50625150)
chr1 (58-185)||(39027606-39027733)
chr1 (60-233)||(14602223-14602394)
chr1 (60-166)||(50616936-50617042)
chr1 (69-232)||(47829176-47829337)
chr1 (74-189)||(39027492-39027607)
chr1 (60-231)||(39288149-39288322)
chr1 (140-232)||(33618973-33619065)
chr1 (126-232)||(12322306-12322412)
chr1 (134-210)||(51999546-51999622)
chr1 (127-235)||(44561602-44561709)
[»] scaffold0817 (2 HSPs)
scaffold0817 (59-235)||(3979-4155)
scaffold0817 (58-201)||(4227-4370)
[»] chr6 (34 HSPs)
chr6 (59-235)||(31717171-31717347)
chr6 (59-235)||(19661560-19661736)
chr6 (69-235)||(8926193-8926359)
chr6 (69-235)||(8936450-8936616)
chr6 (60-235)||(3345230-3345405)
chr6 (69-235)||(5923832-5923999)
chr6 (69-235)||(30609077-30609243)
chr6 (69-234)||(33783609-33783775)
chr6 (69-235)||(3484789-3484956)
chr6 (69-235)||(28853490-28853657)
chr6 (128-235)||(29819451-29819558)
chr6 (74-232)||(17238248-17238406)
chr6 (69-235)||(17238038-17238206)
chr6 (69-219)||(16525202-16525349)
chr6 (69-232)||(19661356-19661518)
chr6 (59-232)||(5404784-5404957)
chr6 (59-232)||(30608862-30609035)
chr6 (69-232)||(3345026-3345189)
chr6 (57-232)||(26272194-26272369)
chr6 (50-232)||(16525407-16525589)
chr6 (74-201)||(28853730-28853857)
chr6 (159-235)||(5404666-5404742)
chr6 (69-232)||(5924041-5924205)
chr6 (69-232)||(8926401-8926566)
chr6 (69-232)||(8936658-8936823)
chr6 (74-201)||(3485019-3485146)
chr6 (69-169)||(5140696-5140796)
chr6 (128-232)||(31717389-31717493)
chr6 (60-215)||(9571627-9571782)
chr6 (59-171)||(5409170-5409282)
chr6 (79-228)||(33783412-33783562)
chr6 (117-232)||(29819600-29819715)
chr6 (60-109)||(29819412-29819461)
chr6 (69-137)||(5404606-5404674)
[»] chr5 (33 HSPs)
chr5 (59-235)||(10461556-10461732)
chr5 (69-235)||(18786192-18786357)
chr5 (60-235)||(15969427-15969602)
chr5 (58-233)||(43197114-43197289)
chr5 (69-234)||(3598419-3598584)
chr5 (69-235)||(41137147-41137313)
chr5 (59-235)||(5933336-5933512)
chr5 (59-235)||(24491054-24491230)
chr5 (69-235)||(6497198-6497364)
chr5 (69-233)||(14868683-14868843)
chr5 (69-235)||(22394335-22394501)
chr5 (69-235)||(4122788-4122954)
chr5 (69-235)||(6542470-6542635)
chr5 (69-235)||(29991110-29991274)
chr5 (69-235)||(40588861-40589026)
chr5 (72-232)||(18785991-18786150)
chr5 (58-232)||(22394119-22394293)
chr5 (74-231)||(3598628-3598785)
chr5 (69-218)||(40589481-40589629)
chr5 (60-232)||(6497406-6497578)
chr5 (69-232)||(14868887-14869049)
chr5 (74-230)||(24490855-24491010)
chr5 (60-235)||(7133123-7133297)
chr5 (69-232)||(10461351-10461514)
chr5 (85-232)||(7133339-7133489)
chr5 (117-232)||(15969644-15969759)
chr5 (59-232)||(6542255-6542428)
chr5 (69-201)||(43196907-43197039)
chr5 (134-232)||(5933196-5933294)
chr5 (134-232)||(4122648-4122746)
chr5 (69-232)||(25329103-25329266)
chr5 (134-228)||(29991320-29991414)
chr5 (159-232)||(41137355-41137428)
[»] chr2 (52 HSPs)
chr2 (69-235)||(19204598-19204764)
chr2 (69-235)||(14379324-14379490)
chr2 (59-235)||(28921190-28921365)
chr2 (69-235)||(6880184-6880350)
chr2 (69-235)||(41594162-41594328)
chr2 (59-235)||(18369224-18369399)
chr2 (69-235)||(3371308-3371474)
chr2 (69-233)||(7877537-7877702)
chr2 (60-235)||(12806545-12806721)
chr2 (59-235)||(13572468-13572643)
chr2 (59-235)||(30432806-30432982)
chr2 (60-235)||(2395154-2395329)
chr2 (60-235)||(29683173-29683346)
chr2 (69-235)||(38873480-38873644)
chr2 (69-235)||(17457929-17458095)
chr2 (69-222)||(25318518-25318671)
chr2 (59-235)||(6164109-6164285)
chr2 (69-235)||(3948575-3948742)
chr2 (53-235)||(33940888-33941069)
chr2 (58-223)||(37609178-37609343)
chr2 (69-235)||(32521480-32521647)
chr2 (60-235)||(10748705-10748877)
chr2 (135-235)||(4171597-4171697)
chr2 (74-232)||(4171739-4171897)
chr2 (69-232)||(29683388-29683551)
chr2 (144-235)||(30771149-30771240)
chr2 (59-232)||(18369009-18369182)
chr2 (59-232)||(28921407-28921580)
chr2 (69-232)||(42705166-42705329)
chr2 (59-232)||(12806763-12806936)
chr2 (69-232)||(3948370-3948533)
chr2 (69-232)||(10748500-10748663)
chr2 (58-232)||(2395371-2395545)
chr2 (69-232)||(7877329-7877493)
chr2 (69-232)||(14379119-14379282)
chr2 (82-232)||(41593970-41594120)
chr2 (164-235)||(42705053-42705124)
chr2 (59-232)||(19204806-19204980)
chr2 (74-232)||(30432607-30432764)
chr2 (117-232)||(3371516-3371631)
chr2 (58-232)||(37608952-37609125)
chr2 (60-201)||(33940678-33940819)
chr2 (112-232)||(25318365-25318485)
chr2 (134-232)||(6163969-6164067)
chr2 (128-232)||(6880038-6880142)
chr2 (84-232)||(13572685-13572833)
chr2 (134-232)||(17457789-17457887)
chr2 (126-228)||(32521693-32521795)
chr2 (56-108)||(13278057-13278110)
chr2 (59-134)||(42704985-42705059)
chr2 (181-235)||(4726010-4726064)
chr2 (144-233)||(35510901-35510990)
[»] chr8 (38 HSPs)
chr8 (60-235)||(13154236-13154411)
chr8 (60-235)||(31403124-31403299)
chr8 (69-235)||(31685676-31685842)
chr8 (58-235)||(6943652-6943829)
chr8 (60-235)||(9180042-9180217)
chr8 (69-235)||(26479505-26479671)
chr8 (60-235)||(2835122-2835297)
chr8 (69-233)||(6891785-6891948)
chr8 (60-235)||(220510-220684)
chr8 (60-235)||(689665-689839)
chr8 (60-235)||(734133-734307)
chr8 (60-235)||(858029-858203)
chr8 (69-235)||(24332267-24332434)
chr8 (69-235)||(31186380-31186545)
chr8 (69-235)||(18764496-18764662)
chr8 (69-235)||(37586228-37586393)
chr8 (60-235)||(13405445-13405620)
chr8 (74-232)||(3272934-3273092)
chr8 (83-232)||(13405662-13405811)
chr8 (51-232)||(18764274-18764454)
chr8 (159-235)||(3272816-3272892)
chr8 (60-232)||(6943871-6944043)
chr8 (69-232)||(13154453-13154616)
chr8 (57-232)||(31402906-31403082)
chr8 (80-201)||(9180290-9180411)
chr8 (126-232)||(24332476-24332581)
chr8 (60-198)||(2835342-2835479)
chr8 (128-201)||(31685916-31685989)
chr8 (128-232)||(31186587-31186691)
chr8 (144-233)||(27993490-27993579)
chr8 (144-233)||(28050792-28050881)
chr8 (130-198)||(26479392-26479460)
chr8 (181-221)||(20112533-20112573)
chr8 (158-233)||(37586113-37586187)
chr8 (159-232)||(6891992-6892065)
chr8 (59-131)||(3272745-3272817)
chr8 (127-211)||(20112651-20112735)
chr8 (69-109)||(31186681-31186721)
[»] scaffold0167 (2 HSPs)
scaffold0167 (69-235)||(4598-4764)
scaffold0167 (176-232)||(4500-4556)
[»] scaffold0006 (2 HSPs)
scaffold0006 (58-235)||(212623-212800)
scaffold0006 (54-232)||(212403-212581)
[»] scaffold0147 (2 HSPs)
scaffold0147 (59-235)||(25119-25295)
scaffold0147 (117-232)||(25325-25440)
[»] scaffold0103 (2 HSPs)
scaffold0103 (69-224)||(43500-43655)
scaffold0103 (74-232)||(43288-43446)
[»] scaffold0170 (2 HSPs)
scaffold0170 (60-235)||(8753-8928)
scaffold0170 (69-232)||(8547-8711)
[»] scaffold0126 (2 HSPs)
scaffold0126 (74-235)||(36205-36365)
scaffold0126 (82-232)||(36013-36163)
[»] scaffold0021 (2 HSPs)
scaffold0021 (69-233)||(118035-118198)
scaffold0021 (82-201)||(118277-118396)
[»] scaffold0137 (3 HSPs)
scaffold0137 (60-232)||(36764-36934)
scaffold0137 (159-235)||(36976-37052)
scaffold0137 (57-137)||(37044-37124)
[»] scaffold0028 (3 HSPs)
scaffold0028 (69-230)||(74130-74290)
scaffold0028 (155-235)||(74007-74087)
scaffold0028 (69-131)||(73939-74001)
[»] scaffold0045 (1 HSPs)
scaffold0045 (60-124)||(43907-43971)


Alignment Details
Target: chr7 (Bit Score: 163; Significance: 3e-87; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 21 - 235
Target Start/End: Original strand, 34487100 - 34487314
Alignment:
Q  21 aaagtggtcatatagaaatggattgaggataaaaatataaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaa 120  Q
    |||||||||||||||||||||||||||||||||||| ||||||| || |||| ||||||| |||||||||||||| ||||||||||||| ||||||||||    
T  34487100 aaagtggtcatatagaaatggattgaggataaaaatgtaaggcttaaatatgaaaatggttcctgcaaatatctgccgttttggttttagctcttataaa 34487199  T
Q  121 aataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattgg 220  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34487200 aatatttttttggttttagtctctgcaaatatagaatatttggtttttgtctttggtattttgttttaatcgttgtaaaatcatttcatattgaaattgg 34487299  T
Q  221 tccctgtaatattca 235  Q
    || || |||||||||    
T  34487300 tctctataatattca 34487314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 42516873 - 42517039
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||||||||||||| | |||||||||||  || |||||||||| |||||||||||||||| ||||||||||||||||||| ||||||    
T  42516873 tatggaaatggtccctgcaaatatctggcattttggttttagttcctataaaaatatttttttggttttagtccctgcaaatatagaatatttagttttg 42516972  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42516973 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 42517039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 13426669 - 13426503
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||| |||||||||||||||||||||||||||| ||||||   | | |||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  13426669 tatgggaatggtccctgcaaatatctgacgttttagttttagtccctctaaaaatatttttttggttttagtccctgcaaatatagaatatttggttttg 13426570  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13426569 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 13426503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 34595696 - 34595530
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||||||||||| |||||||||||||||||||||||   | |||||||||| |||||||| ||||||| ||||||||||||||||||||||||||    
T  34595696 tatgaaaatggtccctgtaaatatctgacgttttggttttagtccctataaaaatatttttttggctttagtccctgcaaatatagaatatttggttttg 34595597  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34595596 gtccttggtatattgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 34595530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 44219683 - 44219505
Alignment:
Q  57 ataaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaa 156  Q
    |||||||| || ||||||||| ||||||||||||||||  ||||||||||||||  | |||||||||| |||||||||||||||| ||||||| ||||||    
T  44219683 ataaggcttaaatatggaaatagtccctgcaaatatcttgcgttttggttttattccctataaaaatatttttttggttttagtccctgcaaaaatagaa 44219584  T
Q  157 tatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  44219583 tatttggttttggcccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctctagtattca 44219505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 19157691 - 19157865
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || ||||||||||||||||||||||||||| ||| |||||||||   |||||||   |  |||||||||||||||| ||||||||||||||||    
T  19157691 aaggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtccttataatttt--ttttttggttttagtccctgcaaatatagaata 19157788  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19157789 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 19157865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 20757090 - 20757264
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || ||||||||||||||||||||||||||| ||| |||||||||   |||||||   |  |||||||||||||||| ||||||||||||||||    
T  20757090 aaggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtccttataatttt--ttttttggttttagtccctgcaaatatagaata 20757187  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20757188 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 20757264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 44483235 - 44483402
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttgg-ttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||||||||||||||||||||||||||||||||||||||||   | |||||||||| |||||| | ||||| || |||||||||||||||||||||||||    
T  44483235 tatggaaatggtccctgcaaatatctgacgttttggttttagtccctataaaaatattttttttgattttaatccctgcaaatatagaatatttggtttt 44483334  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
     ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  44483335 agtccttgatattttgttttaatccttgtaaaatcatttcatattgaaattagtccctataatattca 44483402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 69 - 223
Target Start/End: Complemental strand, 22365028 - 22364874
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||||||||||| | |||||||||||  | ||||||||||| ||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  22365028 tatggaaatggttcttgcaaatatcttgcattttggttttagtct-ttataaaaatatttttttggttttagtccctgcaaatatagaatatttggtttt 22364930  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtcc 223  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22364929 gatccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtcc 22364874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 35026451 - 35026616
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||||||| |||||||||||||||||||   | | |||||||  |||||| |||||||||  |||||||||||||||||||||||||    
T  35026451 tatggaaatggtccctgcaaacatctgacgttttggttttagtccctgtaaaaat-ttttttttgttttagtccatgcaaatatagaatatttggttttg 35026549  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
     || |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  35026550 atcattggtattttgttttaatccttgtaaaatcatttcatattaaaattggtccctataatattca 35026616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 72 - 235
Target Start/End: Complemental strand, 24732 - 24567
Alignment:
Q  72 ggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataatttttt--ggttttagtctctgcaaatatagaatatttggttttgg 169  Q
    |||||||||||| ||||||||||  |||||||||||||   | ||||||  |  ||||||  |||||||||| ||||||| |||||||||||||||||||    
T  24732 ggaaatggtccccgcaaatatcttgcgttttggttttagtccctataaatttttttttttttggttttagtccctgcaaaaatagaatatttggttttgg 24633  T
Q  170 tccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  24632 tccttggtattttgttttaatccttgtaaaatcatttcttattgaaattggtccctataatattca 24567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 40729128 - 40729235
Alignment:
Q  128 ttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgt 227  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  40729128 tttttgttttagtccctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattaaaattggtccctat 40729227  T
Q  228 aatattca 235  Q
    ||||||||    
T  40729228 aatattca 40729235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 19476390 - 19476566
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttg--gttttagtctctgcaaatatagaat 157  Q
    ||||| || |||||||||||||||||| ||||| || |||||||||||||   | |||||||||| ||||||   ||||||||| |||||||||||||||    
T  19476390 aggcttaaatatggaaatggtccctgccaatatttggcgttttggttttagtccctataaaaatattttttttttgttttagtccctgcaaatatagaat 19476489  T
Q  158 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||||| ||||||||| |||||||||    
T  19476490 atttggttttggttcttggtatttaattttaat-cttgtaaaatcatttcatattgaagttggtccctataatattca 19476566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 59 - 235
Target Start/End: Complemental strand, 31579819 - 31579642
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataatttttt-ggttttagtctctgcaaatatagaa 156  Q
    |||||| || ||| |||||||||| ||||||| |||  ||||||| ||||| |||||  |||||||| |||||| |||||||||| ||||||||||| ||    
T  31579819 aaggcttaaatatagaaatggtccttgcaaatttctagcgttttgattttagtctctc-taaaaatattttttttggttttagtccctgcaaatataaaa 31579721  T
Q  157 tatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  31579720 tatttgattttggtctttggtattttgttttaatccttgtaaaatcatttcatattaaaattggtccctataatattca 31579642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 71 - 201
Target Start/End: Complemental strand, 22954706 - 22954576
Alignment:
Q  71 tggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttgg 169  Q
    |||||||||| |||| ||||||||| | |||| |||||| ||||| ||||||||| |||||||||||||||| |||||||||||||||||||| ||||||    
T  22954706 tggaaatggttcctgtaaatatctggcattttagttttaatctct-ataaaaatatttttttggttttagtccctgcaaatatagaatatttgattttgg 22954608  T
Q  170 tccttggtattttgttttaatccttgtaaaat 201  Q
    || |||||||||||||||||||||||||||||    
T  22954607 tctttggtattttgttttaatccttgtaaaat 22954576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 19476714 - 19476608
Alignment:
Q  126 ttttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccct 225  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||| | ||||||| |    
T  19476714 tttttttgttttagtccctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaattgattcatattggatttggtcctt 19476615  T
Q  226 gtaatat 232  Q
    |||||||    
T  19476614 gtaatat 19476608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 232
Target Start/End: Complemental strand, 19158080 - 19157907
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| |||| ||||||||||||||||||| |||||||||||   | | |||||||| |||||| ||||||||| ||||||||||| ||      
T  19158080 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttagttttagtccctgcaaatataaaaat 19157981  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||||||||||||||||||||||| ||| ||||||||   ||||||||| | | ||||| ||||||||    
T  19157980 tttggttttggtccttggtattttgttttagtccctgtaaaattgattcatattggattcggtccttgtaatat 19157907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 232
Target Start/End: Complemental strand, 20757479 - 20757306
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| |||| ||||||||||||||||||| |||||||||||   | | |||||||| |||||| ||||||||| ||||||||||| ||      
T  20757479 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttagttttagtccctgcaaatataaaaat 20757380  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||||||||||||||||||||||| ||| ||||||||   ||||||||| | | ||||| ||||||||    
T  20757379 tttggttttggtccttggtattttgttttagtccctgtaaaattgattcatattggattcggtccttgtaatat 20757306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 232
Target Start/End: Complemental strand, 35026830 - 35026658
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| |||| ||||||| |||||| |||| |||||||||||  || | |||||||| |||||||||||||||||||| ||||||| || |    
T  35026830 aaggcttaaatatgaaaatagtccctgtaaatat-tgacattttggttttagttcatgtaaaaatatttttttggttttagtctctgtaaatataaaaaa 35026732  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
     |||||||||||||||| |||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  35026731 attggttttggtccttgatattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 35026658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 80 - 232
Target Start/End: Complemental strand, 42517233 - 42517081
Alignment:
Q  80 tccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtat 179  Q
    |||| ||||||||||||| |||||||||||   | | |||||||| |||||||||||||||| ||||||||||| || ||||| |||| |||||||||||    
T  42517233 tccccgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttgattttagtccttggtat 42517134  T
Q  180 tttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  42517133 tttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 42517081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 24362 - 24525
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||| ||||| ||||||||||||| |||||||||||   | | |||||||| |||||||||||||||| ||||||||||| || ||| |||||||    
T  24362 tatgaaaatagtcccggcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaattgggttttg 24461  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    | |||| ||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  24462 gacctttgtattttgttttattccttgtaaaattgattcatattggatttggtccttgtaatat 24525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 58 - 232
Target Start/End: Complemental strand, 40729451 - 40729277
Alignment:
Q  58 taaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaat 157  Q
    ||||||| || |||| |||| |||  |||||||||||||| |||||||||||   | | |||||||| |||||||||||||||| ||||||||||| ||     
T  40729451 taaggcttaaatatgaaaatagtctttgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaa 40729352  T
Q  158 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||| |||||||||||||||| |||||||||| ||||||||||||   ||||||||  | ||||||| ||||||||    
T  40729351 attgggttttggtccttggtgttttgttttagtccttgtaaaattgattcatattcgatttggtccttgtaatat 40729277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 44219300 - 44219463
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||| |||| ||||||||||||||||||| ||||||||||| || ||  |||||||| ||||||| |||||||| ||  ||||||| || ||||||||||    
T  44219300 tatgaaaatagtccctgcaaatatctgacattttggttttagtcactg-taaaaatatttttttgtttttagtccctataaatataaaaaatttggtttt 44219398  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||| ||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  44219399 ggtcctttgtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 44219463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 74 - 231
Target Start/End: Complemental strand, 44483598 - 44483441
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcct 173  Q
    |||| ||||| |||||||| | || |||||||||||   | | |||||||| |||||||||||||||| ||||||||||| ||  ||||||||||||| |    
T  44483598 aaatagtccccgcaaatatttaacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaattttggttttggtcat 44483499  T
Q  174 tggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaata 231  Q
    ||||||||||||||| ||||||||||||   ||||||||| | ||||||| |||||||    
T  44483498 tggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaata 44483441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 34595324 - 34595488
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacg-ttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||| |||| ||||| | |||||||||||  |||||||||||   | | |||||||| ||||||| |||||||| ||||||||  | || ||||||||||    
T  34595324 tatgaaaatagtccccgtaaatatctgacaattttggttttaatccctgtaaaaatatttttttgattttagtccctgcaaattaaaaaaatttggtttt 34595423  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||||||||||| ||||||||||||   ||||||||  | ||||||| ||||||||    
T  34595424 ggtccttggtattttgttttagtccttgtaaaattgattcatattagatttggtccttgtaatat 34595488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 22954403 - 22954509
Alignment:
Q  126 ttttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccct 225  Q
    |||||| ||||||||| ||||||||||| || | |||||| ||||||||| |||||||||||| ||||||||||||   ||||||||||| ||||||| |    
T  22954403 tttttttgttttagtccctgcaaatataaaaaaattggttgtggtccttgatattttgttttagtccttgtaaaattgattcatattgaatttggtcctt 22954502  T
Q  226 gtaatat 232  Q
    |||||||    
T  22954503 gtaatat 22954509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 74 - 232
Target Start/End: Original strand, 22364668 - 22364822
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcct 173  Q
    |||| ||||||||||||||||||| |||||||||||   | | |||   |  |||||||||||||||| ||||||||||| || ||||||||| ||||||    
T  22364668 aaatagtccctgcaaatatctgacattttggttttagtccctgtaa---tttttttttggttttagtccctgcaaatataaaaaatttggttt-ggtcct 22364763  T
Q  174 tggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    || |||||||||||| |||||| |||||   ||||||||| | ||||||| ||||||||    
T  22364764 tgatattttgttttagtccttgcaaaattgattcatattggatttggtccttgtaatat 22364822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 830001 - 829926
Alignment:
Q  126 ttttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaat 201  Q
    |||||| |||| |||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||    
T  830001 ttttttagtttcagtccctgcaaatataaaaaatttggttttggtccttggtattttgttttagtccttgtaaaat 829926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 1195181 - 1195106
Alignment:
Q  126 ttttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaat 201  Q
    |||||| |||| |||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||    
T  1195181 ttttttagtttcagtccctgcaaatataaaaaatttggttttggtccttggtattttgttttagtccttgtaaaat 1195106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 232
Target Start/End: Original strand, 31579498 - 31579600
Alignment:
Q  130 ttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaa 229  Q
    |||||||||||| ||||||||||| || | ||| ||||||||||||||||||||||||  ||||||||||||   ||||||||| | ||||||| |||||    
T  31579498 ttggttttagtccctgcaaatataaaaaaattgattttggtccttggtattttgtttttgtccttgtaaaattgattcatattggatttggtccttgtaa 31579597  T
Q  230 tat 232  Q
    |||    
T  31579598 tat 31579600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 34487462 - 34487356
Alignment:
Q  126 ttttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccct 225  Q
    ||||||| |||||||| || |||||||| || ||||||||| ||||||||||||||||||||| ||||||||||||   ||||||||| | ||||||  |    
T  34487462 ttttttgattttagtccctccaaatataaaaaatttggtttcggtccttggtattttgttttagtccttgtaaaattgattcatattggatttggtcatt 34487363  T
Q  226 gtaatat 232  Q
    |||||||    
T  34487362 gtaatat 34487356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 40729088 - 40729138
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggtttta 109  Q
    |||||| || ||||||||||||||||||||||||||| |||||| ||||||    
T  40729088 aaggcttaaatatggaaatggtccctgcaaatatctggcgtttttgtttta 40729138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 827110 - 827202
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    ||||||||| |||||||||||||| ||||| || ||   | | |||||||| ||||| |||||||||| |||||||| || |||||||||||||    
T  827110 aaatggtccttgcaaatatctgacattttgattctagtccctctaaaaatattttttgggttttagtccctgcaaat-tataatatttggtttt 827202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 167
Target Start/End: Original strand, 829121 - 829213
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    ||||||||| |||||||||||||| ||||| || ||   | | |||||||| ||||| |||||||||| |||||||| || |||||||||||||    
T  829121 aaatggtccttgcaaatatctgacattttgattctagtccctctaaaaatattttttgggttttagtccctgcaaat-tataatatttggtttt 829213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 46101435 - 46101479
Alignment:
Q  144 tgcaaatatagaatatttggttttggtccttggtattttgtttta 188  Q
    |||||||||||||||||| |||||||| |||||| |||| |||||    
T  46101435 tgcaaatatagaatattttgttttggttcttggtgttttatttta 46101479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 4e-71; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 2184772 - 2184605
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    ||||||||||||||||||||||||||||||||||||||||| | || |||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  2184772 tatggaaatggtccctgcaaatatctgacgttttggttttagtgtcctataaaaatatttttttggttttagtccctgcaaatatagaatatttggtttt 2184673  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  2184672 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccatataatattca 2184605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 59 - 235
Target Start/End: Complemental strand, 989462 - 989286
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||   | |||||||||| |||||||||||||||| ||||| ||||||||||    
T  989462 aaggcttaaatatggaaatggtccctgcaaatatctgacgttttggttttagtccctataaaaatatttttttggttttagtccctgcagatatagaata 989363  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  989362 tttggttttggtctttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 989286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 55 - 235
Target Start/End: Original strand, 22487212 - 22487392
Alignment:
Q  55 atataaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatag 154  Q
    |||| ||||| || ||||||||||||||| |||||||||||  ||||||||||||   |||||||||||| ||||||| |||||||||||||||||||||    
T  22487212 atattaggcttaaatatggaaatggtccccgcaaatatctggtgttttggttttagtccttataaaaatatttttttgtttttagtctctgcaaatatag 22487311  T
Q  155 aatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22487312 aatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 22487392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 5720950 - 5721124
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || ||||||||||||||||||||||||||| |||||||||||||   | |||||||||| |||||||||||||||| |||||||||||||||||    
T  5720950 aggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaata-ttttttggttttagtccctgcaaatatagaatat 5721048  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5721049 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 5721124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 43749944 - 43750119
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||||||||||||||||||||||||||  |||||| |||||  || |||||||||| |||||||||||||||| |||||||||||||||||    
T  43749944 aggcttaaatatggaaatggtccctgcaaatatctggtgttttgattttagttcctataaaaatatttttttggttttagtccctgcaaatatagaatat 43750043  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43750044 ttggttttggtccttggtattttgctttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 43750119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 13683001 - 13683176
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||||||||| |||||||||||||||||| |||||||||||   | |||||||||| |||||||||||||||| ||| |||||||||||||    
T  13683001 aggcttaaatatggaaatgatccctgcaaatatctgacattttggttttagtccctataaaaatatttttttggttttagtccctgtaaatatagaatat 13683100  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13683101 ttggttttggtccttggtattttgctttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 13683176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 37815347 - 37815513
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||| ||||||||| | |||||| ||||   | |||||||||| ||||||||||||||||  |||||||||||||||||||||||||    
T  37815347 tatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaatatttttttggttttagtccatgcaaatatagaatatttggttttg 37815446  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37815447 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 37815513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 55 - 235
Target Start/End: Original strand, 17107424 - 17107604
Alignment:
Q  55 atataaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatag 154  Q
    |||||||||| || ||||||||||||||||| |||||| || |||||| ||||||   | | | |||||| |||||||||||||||| ||||||||||||    
T  17107424 atataaggcttaaatatggaaatggtccctgaaaatatttggcgttttagttttagtccctgttaaaatatttttttggttttagtccctgcaaatatag 17107523  T
Q  155 aatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  17107524 aatatttggttttggtccttggtattttgttttaatccttgtacaatcatttcatattgaaattggtccctataatattca 17107604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 11021679 - 11021845
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| ||||||||||| |||||||||| |||||||||||||   | |||||||||| ||||||| |||| ||| ||||||||||| ||||||||||||||    
T  11021679 tatgaaaatggtccctacaaatatctggcgttttggttttagtccctataaaaatatttttttgattttggtccctgcaaatataaaatatttggttttg 11021778  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11021779 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 11021845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 46081751 - 46081585
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| ||||||| || |||||||||||||||||||||||||   ||||| | ||||  ||||| |||||||| |||||||||||||||||||||||||||    
T  46081751 tatgaaaatggttcccgcaaatatctgacgttttggttttaatccttatgagaatatattttttgttttagtttctgcaaatatagaatatttggttttg 46081652  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  46081651 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 46081585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 16960150 - 16959975
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || ||||||||||||||||||||||||||  | |||||||||||   | |||||||||| ||||||||||||||||  |||||| |||||||||    
T  16960150 aggcttaaatatggaaatggtccctgcaaatatcttgcattttggttttagtccctataaaaatatttttttggttttagtccttgcaaaaatagaatat 16960051  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16960050 ttggttttgatccttagtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 16959975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 59 - 235
Target Start/End: Complemental strand, 9301955 - 9301780
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaat 157  Q
    |||||| || ||||||||||||||  ||||||||||| ||||||| ||||| ||||| ||||||||| ||||||||||||||||  ||||||||||||||    
T  9301955 aaggcttaaatatggaaatggtcca-gcaaatatctggcgttttgattttagtctct-ataaaaatatttttttggttttagtccatgcaaatatagaat 9301858  T
Q  158 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  9301857 atttgattttggtccttggtattttgttttaatccttgtaaaatcatttcatattgatattggtccgtataatattca 9301780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 39385539 - 39385372
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaata-attttttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||||||||||||||| |||||||||||||||||| |||||   | |||||||||| ||| ||| ||||||||| ||||||||||| |||||||||||||    
T  39385539 tatggaaatggtccctacaaatatctgacgttttgcttttaatccctataaaaatatattattttgttttagtccctgcaaatataaaatatttggtttt 39385440  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
     ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39385439 tgtctttggtatattgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 39385372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 26314852 - 26314686
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||||||||| |||  ||||||||||| |||||||||||||   | |||||||||| |||||||||||||||| |||||||||||||||||||||||| |    
T  26314852 tatggaaatgttcctggcaaatatctggcgttttggttttaatccctataaaaatatttttttggttttagtccctgcaaatatagaatatttggtttag 26314753  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
     |||||||||||||||||||||||  ||||||||||||||||||||||||||||| | |||||||||    
T  26314752 atccttggtattttgttttaatccacgtaaaatcatttcatattgaaattggtccatataatattca 26314686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 16491643 - 16491819
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| ||||||||| || ||||||||| | ||||  |||||  || |||||||||| ||||||||||||| || ||||||||||||||||    
T  16491643 aaggcttaaatatgaaaatggtccttgtaaatatctggcattttaattttagttcctataaaaatatttttttggttttaatccctgcaaatatagaata 16491742  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| | |||||||    
T  16491743 tttggttttggtccttggtattttattttaatccttataaaatcatttcatattgaaattggtccctatgatattca 16491819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 99 - 235
Target Start/End: Original strand, 17865012 - 17865148
Alignment:
Q  99 ttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaa 198  Q
    |||||||||||   | |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17865012 ttttggttttagtccatataaaaatatttttttggttttagtccctgcaaatatagaatatttggttttggtccttgatattttgttttaatccttgtaa 17865111  T
Q  199 aatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||| |||||||| |||||||||    
T  17865112 aatcatttcatattgaaaatggtccctataatattca 17865148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 4712176 - 4712350
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||| ||||||||||||||||||| || |||||||||||||  || |||||   |  ||||||||| |||||| |||||||||||||||||    
T  4712176 aggcttaaatatgaaaatggtccctgcaaatatttggcgttttggttttagttcctataattttttttttttggtattagtccctgcaaatatagaatat 4712275  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  4712276 ttggttttggtccttggtattttg-tttaatccttataaaatcatttcatattgaaattggtccctataatattca 4712350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 59 - 232
Target Start/End: Complemental strand, 4712564 - 4712392
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| |||| ||||||||||||||||||| |||||||||||   | |||||||||| |||||||||||||||| ||||||||||| || |    
T  4712564 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctataaaaata-ttttttggttttagtccctgcaaatataaaaaa 4712466  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||||||||||||||||||||||||||||||||||||   ||||||||| | ||||||| ||||||||    
T  4712465 tttggttttggtccttggtattttgttttaatccttgtaaaattgattcatattggatttggtccttgtaatat 4712392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 46480982 - 46481089
Alignment:
Q  128 ttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgt 227  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  46480982 ttttggttttagtccctacaaatatagaatatttggttttggtccttggtattttgttttaatcattgtaaaatcatttcatattgaaattggtccctat 46481081  T
Q  228 aatattca 235  Q
    ||||||||    
T  46481082 aatattca 46481089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 32593116 - 32592954
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||||||||||| || |||||||||| || |||||||||||   ||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||    
T  32593116 tatggaaatggttccagcaaatatcttacattttggttttaatccttataaaa-taattttttggttttagtccctgcaaatatagaatatttagttttg 32593018  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||   |||||||||||||||||||| ||||||||||||||||||| |||||| | | |||||||||    
T  32593017 gtc---ggtattttgttttaatccttataaaatcatttcatattgatattggttcatataatattca 32592954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 60 - 230
Target Start/End: Complemental strand, 13493271 - 13493100
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataatttt---ttggttttagtctctgcaaatatagaa 156  Q
    ||||| || |||||||||||||||||||||||| |  |||||||||||||  ||| ||||||||||  |    |||||||||||| ||||||||||||||    
T  13493271 aggcttaaatatggaaatggtccctgcaaatatttagcgttttggttttag-tct-ataaaaataaaataaaattggttttagtccctgcaaatatagaa 13493174  T
Q  157 tatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaat 230  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  13493173 tatttggttttgatccatggtattttgttttaatccttgtaaaaccatttcatattgaaattggtccctataat 13493100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 232
Target Start/End: Complemental strand, 17865353 - 17865190
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||| ||||||||||||||||||| |||||||||||   | | |||||||| |||||||||||||||| ||||||||||| || |||||||||||    
T  17865353 tatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttggttttg 17865254  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||| |||||||||||||||||||||||||||||   ||||||||| | ||||||| ||||||||    
T  17865253 gtctttggtattttgttttaatccttgtaaaattgattcatattggatttggtccttgtaatat 17865190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 134 - 235
Target Start/End: Complemental strand, 12792884 - 12792783
Alignment:
Q  134 ttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatatt 233  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||    
T  12792884 ttttagtccctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaattatttcatattgaaattggtcactataatatt 12792785  T
Q  234 ca 235  Q
    ||    
T  12792784 ca 12792783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 74 - 232
Target Start/End: Original strand, 32592754 - 32592912
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcct 173  Q
    |||| |||||||||||||| |||| |||||||||||   ||| |||||||| |||||||||||||||| ||||||||||| ||  |||||||||||||||    
T  32592754 aaatagtccctgcaaatatttgacattttggttttagtccttgtaaaaatatttttttggttttagtccctgcaaatataaaaattttggttttggtcct 32592853  T
Q  174 tggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    || |||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  32592854 tgatattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 32592912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 58 - 232
Target Start/End: Complemental strand, 17107819 - 17107646
Alignment:
Q  58 taaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaat 157  Q
    ||||||| || |||| |||| ||||||||||||||||||| |||||||||||  || | |||||||| ||||||| |||||||| ||||||||||| ||     
T  17107819 taaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttag-tcatgtaaaaatatttttttgattttagtccctgcaaatataaaaa 17107721  T
Q  158 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    | ||| ||||||||||||||||||||||||| |||||||| |||   ||||||||| | ||||||| ||||||||    
T  17107720 aattgattttggtccttggtattttgttttagtccttgtagaattgattcatattggatttggtccttgtaatat 17107646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 59 - 232
Target Start/End: Complemental strand, 37815729 - 37815555
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataatttttt-ggttttagtctctgcaaatatagaat 157  Q
    |||||| || |||| |||| ||||| ||||||||||||| |||||||||||   | | |||||||| |||||| |||||||||| ||||||||||| ||     
T  37815729 aaggcttaaatatgaaaattgtcccagcaaatatctgacattttggttttagtccctgtaaaaatattttttttggttttagtccctgcaaatataaaaa 37815630  T
Q  158 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  37815629 atttggttttggtccttggtattttattttagtccttgtaaaattgattcatattggatttggtccttgtaatat 37815555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 13492890 - 13493053
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||| ||||||||||||||||||| |||||||||||   | | |||||||| |||||||||||||||| ||||||||| | || | |||||||||    
T  13492890 tatgaaaatagtccctgcaaatatctgactttttggttttagtccctctaaaaatatttttttggttttagtccctgcaaataaaaaaaaattggttttg 13492989  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||| |||||||||||||||| ||||||||||||   ||||||||| | ||||| | ||||||||    
T  13492990 gtctttggtattttgttttattccttgtaaaattgattcatattggatttggttcttgtaatat 13493053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 16959769 - 16959933
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataatttt-ttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||| |||| ||||||||||||||||||| |||| ||||||   | |||||||||| |||| ||||||||||||  |||||||||| || ||||||||||    
T  16959769 tatgaaaatagtccctgcaaatatctgacattttagttttagtccctataaaaatattttttttggttttagtccatgcaaatataaaaaatttggtttt 16959868  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||| |||||||| |||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  16959869 ggtcctttgtattttgatttagtccttgtaaaattgattcatattggatttggtccttgtaatat 16959933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 232
Target Start/End: Complemental strand, 16492035 - 16491861
Alignment:
Q  57 ataaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaa 156  Q
    |||||||| || |||| |||| ||| ||||||||||||||| |||||||||||   | | |||||||| |||||| ||||||| || |||||||||| ||    
T  16492035 ataaggcttaaatatgaaaatagtcactgcaaatatctgacattttggttttaatccctgtaaaaatatttttttagttttagcct-tgcaaatataaaa 16491937  T
Q  157 tatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
     | ||||||||||||||||||||||||||||| ||||||||||||   ||||||||| | ||||| | ||||||||    
T  16491936 aaattggttttggtccttggtattttgttttagtccttgtaaaattgattcatattggatttggttcttgtaatat 16491861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 228
Target Start/End: Original strand, 26314487 - 26314640
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcct 173  Q
    |||| ||||||||||||||||||| |||||||||||   | | ||||| || |||||||||||||||| ||||||||||| || ||| | ||||||||||    
T  26314487 aaatagtccctgcaaatatctgacattttggttttagtccctgtaaaactatttttttggttttagtccctgcaaatataaaaaatt-gtttttggtcct 26314585  T
Q  174 tggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgta 228  Q
    ||||||||||||||| |||||||||| |   ||||||||| | ||||||| ||||    
T  26314586 tggtattttgttttagtccttgtaaagttgattcatattggatttggtccttgta 26314640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 43750259 - 43750161
Alignment:
Q  134 ttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||  |||||||||| | ||||||| ||||||||    
T  43750259 ttttagtccctgcaaatataaaaaatttggttttggtccttggtattttgttttagtccttgtaaaattgtttcatattggatttggtccttgtaatat 43750161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 12792595 - 12792710
Alignment:
Q  86 caaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgtt 185  Q
    |||||||||| | |||||||||||   | | |||||||| ||||||| |||||||| ||||||||||| || ||||| |||||||||||| |||||||||    
T  12792595 caaatatctgtcattttggttttagtccctgtaaaaatatttttttgattttagtccctgcaaatataaaaaatttgattttggtccttgatattttgtt 12792694  T
Q  186 ttaatccttgtaaaat 201  Q
    ||||||||||||||||    
T  12792695 ttaatccttgtaaaat 12792710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 22487540 - 22487434
Alignment:
Q  126 ttttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccct 225  Q
    ||||||||||||||||  |||||||||  || ||||||||||||||||||||||||||||||| ||||||||||||   ||||||||| | ||||||| |    
T  22487540 ttttttggttttagtccttgcaaatatgaaaaatttggttttggtccttggtattttgttttagtccttgtaaaattgattcatattggatttggtcctt 22487441  T
Q  226 gtaatat 232  Q
    |||||||    
T  22487440 gtaatat 22487434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 989083 - 989244
Alignment:
Q  69 tatggaaatggtccctgc-aaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||| |||| |||||||| ||||||||||| |||||||||||  || | |||||||| |||||||||||||||| ||| ||||||| || | ||||||||    
T  989083 tatgaaaatagtccctgccaaatatctgacattttggttttag-tcctgtaaaaatatttttttggttttagtc-ctgtaaatataaaaaaattggtttt 989180  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    | |||||| |||||||||| | ||||||||||||   ||||||||||| ||||||| ||||||||    
T  989181 gatccttg-tattttgtttcagtccttgtaaaattgattcatattgaatttggtccttgtaatat 989244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 69 - 232
Target Start/End: Complemental strand, 11022050 - 11021887
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||||||||||| | ||||||||  |||| ||||||   | | |||||||| ||||||||||||||||  | |||||||| || ||||| |||||    
T  11022050 tatgaaaatggtccctgtacatatctgatattttcgttttaatccatgtaaaaatatttttttggttttagtccttacaaatataaaaaatttgattttg 11021951  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||| |||||||||||||| || |||||||||   ||||||||| | ||||||| ||||||||    
T  11021950 gtcctcggtattttgttttagtctttgtaaaattgattcatattggatttggtccttgtaatat 11021887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 74 - 232
Target Start/End: Complemental strand, 13683369 - 13683218
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcct 173  Q
    |||| ||||||||||||||||||| ||||| |||||   | | |||||||| |||||||||||||||        ||||| || ||||||||||||||||    
T  13683369 aaatagtccctgcaaatatctgacattttgattttagtccctgtaaaaatatttttttggttttagtt-------atataaaaaatttggttttggtcct 13683277  T
Q  174 tggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||||| ||||||||||||   ||||||||| | ||||||| | ||||||    
T  13683276 tggtattttgttttagtccttgtaaaattgattcatattggatttggtccttataatat 13683218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 20045882 - 20045974
Alignment:
Q  143 ctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||| ||||||| ||||||||| ||||| ||||||||||||| || |||||| |||||||||||||||||| | || |||||||||    
T  20045882 ctgcaaatatataatatttagttttggtctttggtgttttgttttaatctttataaaattatttcatattgaaattggcctctataatattca 20045974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 2184460 - 2184532
Alignment:
Q  128 ttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaat 201  Q
    |||||||||||||| ||||||||||  || ||||||||||||||||||||||||||||||| ||||||||||||    
T  2184460 ttttggttttagtc-ctgcaaatattaaaaatttggttttggtccttggtattttgttttagtccttgtaaaat 2184532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 46481219 - 46481131
Alignment:
Q  144 tgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||| || |||||||| |||||||||||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  46481219 tgcaaatataaaaaatttggttatggtccttggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 46481131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 232
Target Start/End: Original strand, 9301624 - 9301739
Alignment:
Q  117 taaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaa 216  Q
    |||||||| ||||||  |||||||| || |||| ||| || ||||||||||||||||||  ||||||||||| |||||||||||| | ||||||||| |     
T  9301624 taaaaatatttttttaattttagtcccttcaaacataaaaaatttggttttggtccttgaaattttgttttagtccttgtaaaattaattcatattggat 9301723  T
Q  217 ttggtccctgtaatat 232  Q
    ||||||  ||||||||    
T  9301724 ttggtcattgtaatat 9301739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 6100619 - 6100534
Alignment:
Q  133 gttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaatt 218  Q
    |||||||||| ||||||||||||| ||||  ||||||||||||||||||||||||| || || |||||||  |||||||| |||||    
T  6100619 gttttagtctttgcaaatatagaaaatttcattttggtccttggtattttgttttagtctttataaaatctattcatatttaaatt 6100534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 141
Target Start/End: Original strand, 17864944 - 17865025
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtc 141  Q
    ||||| || |||||||||||||| |||||||||||| |||||||||||||   | |||||||||| ||||||||||||||||    
T  17864944 aggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccatataaaaatatttttttggttttagtc 17865025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 20046114 - 20046016
Alignment:
Q  134 ttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||| |||  |||||| || |||||||||||||||||| |||||||||||| | ||||||||||   || |||||| | ||||||| ||||||||    
T  20046114 ttttagtccctgtcaatataaaaaatttggttttggtccttgctattttgttttagttcttgtaaaattgatttatattggatttggtccttgtaatat 20046016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 149
Target Start/End: Complemental strand, 42239463 - 42239370
Alignment:
Q  56 tataaggctcaactatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaa 149  Q
    ||||||| | || |||| |||| ||||||||||||||||||| |||| |||||| |||| | |||||||| |||||||||||||||| |||||||    
T  42239463 tataaggtttaaatatgaaaatagtccctgcaaatatctgacattttagttttagtctc-tgtaaaaatatttttttggttttagtccctgcaaa 42239370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 232
Target Start/End: Complemental strand, 5721254 - 5721166
Alignment:
Q  145 gcaaatatagaatatttggtttt-ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||| || |||||||||| |||| |||||||||||||||| ||||||||||||    |||||||| | ||||||| ||||||||    
T  5721254 gcaaatataaaaaatttggtttttggtcattggtattttgttttagtccttgtaaaattggatcatattggatttggtccttgtaatat 5721166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 39385179 - 39385282
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    ||||| || |||| |||| |||||| ||||||| |||| |||||| |||| |||||  |||||||| |||||||||||||||| ||||||||||| || |    
T  39385179 aggcttaaatatgaaaatcgtccctccaaatatatgacattttggatttaatctctg-taaaaatatttttttggttttagtccctgcaaatataaaaaa 39385277  T
Q  159 tttgg 163  Q
    |||||    
T  39385278 tttgg 39385282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 46081437 - 46081537
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcct 173  Q
    |||| |||||| |||||||||||| |||| ||||||   | |||||||||| |||||||||||| ||| ||||||||||  ||  |||||||||| ||||    
T  46081437 aaatagtccctccaaatatctgacatttttgttttagtccctataaaaatatttttttggtttt-gtccctgcaaatatgaaaattttggttttgatcct 46081535  T
Q  174 tg 175  Q
    ||    
T  46081536 tg 46081537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 109
Target Start/End: Original strand, 46480942 - 46480992
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggtttta 109  Q
    |||||| || |||| ||||||||| |||||||||||| |||||||||||||    
T  46480942 aaggcttaaatatgaaaatggtccttgcaaatatctggcgttttggtttta 46480992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 3e-69; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 27934447 - 27934623
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || ||||||||||||||||||||||||||| |||||||||||||   | |||||||||| |||||||||||||||| || |||||||||||||    
T  27934447 aaggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatttttttggttttagtcccttcaaatatagaata 27934546  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27934547 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 27934623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 38807544 - 38807710
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||||||||||| ||||||||| ||||||||||||| | |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  38807544 tatgaaaatggtccctgtaaatatctggcgttttggttttagcccttataaaaatatttttttggttttagtccctgcaaatatagaatatttggttttg 38807643  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  38807644 gtccttggtattttgtttcaatccttgtaaaatcatttcatattgaaattggtccctataatattca 38807710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 52835551 - 52835717
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||||||||||||| ||||||| |||||   | |||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  52835551 tatggaaatggtccctgcaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgcaaatatagaatatttggttttg 52835650  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  52835651 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 52835717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 69 - 222
Target Start/End: Original strand, 27284976 - 27285129
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||||||||||||| | ||||| |||||  || |||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  27284976 tatggaaatggtccctgcaaatatctggcattttgattttagttcctataaaaatatttttttggttttagtccctgcaaatatagaatatttggttttg 27285075  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27285076 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtc 27285129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 29838680 - 29838505
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || ||||||||||||||||||||||||||  |||||||||||||   | |||||||||| ||||||||||||||||  |||||| |||||||||    
T  29838680 aggcttaaatatggaaatggtccctgcaaatatcttgcgttttggttttagtccatataaaaatatttttttggttttagtccttgcaaaaatagaatat 29838581  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29838580 ttagttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 29838505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 46962968 - 46962793
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || ||||||||||||||||||||||||||| ||| |||||||||   | |||||||||| ||||||||||||| || |||||||||||||||||    
T  46962968 aggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtccctataaaaatatttttttggttttaatccctgcaaatatagaatat 46962869  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  46962868 ttggttttggttcttggtattttgttttaatccttgtaaaatcatttcatattgaaattgatccctataatattca 46962793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 49499840 - 49500015
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||||||||||||| ||||||||||||  ||||||||||||   | |||||||||| ||||| |||||||||| ||||||||||| |||||    
T  49499840 aggcttaaatatggaaatggtccttgcaaatatctggtgttttggttttagtccctataaaaatattttttgggttttagtccctgcaaatatataatat 49499939  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49499940 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 49500015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 16056355 - 16056520
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||| ||||||||||||||||||| |||||||||||||   | |||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  16056355 tatggaattggtccctgcaaatatctggcgttttggttttagtccctataaaaata-ttttttggttttagtccctgcaaatatagaatatttggttttg 16056453  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16056454 gtcattgatattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 16056520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 26582989 - 26582823
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||||||||||||||| ||||| |||||   | | |||||||| ||||||| |||||||| |||||||||||||||||||| |||||    
T  26582989 tatggaaatggtccctgcaaatatctgacattttgattttagtccctgtaaaaatatttttttgattttagtccctgcaaatatagaatatttgattttg 26582890  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26582889 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 26582823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 50645478 - 50645644
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||||||||||||  |||||||||||||  || |||||||||| ||||||||||||||||  |||||| ||||||||||||||||||    
T  50645478 tatggaaatggtccctgcaaatatcttgcgttttggttttagttcctataaaaatatttttttggttttagtccttgcaaaaatagaatatttggttttg 50645577  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
     ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50645578 atccttagtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 50645644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 14546213 - 14546047
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    ||||||||||||||||||||||||||||| ||||||||| | || ||  |||||||| |||||  ||||||||| |||||||||||||||||||||||||    
T  14546213 tatggaaatggtccctgcaaatatctgacattttggtttcagtcactg-taaaaatattttttgagttttagtccctgcaaatatagaatatttggtttt 14546115  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14546114 ggtcctttgtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 14546047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 33162706 - 33162531
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || ||||||||||||||| | |||||||||||||||| ||||||   | |||||||||| ||||||||||||||||  ||||||||||||||||    
T  33162706 aggcttaaatatggaaatggtccccgtaaatatctgacgttttagttttagtccctataaaaatatttttttggttttagtccttgcaaatatagaatat 33162607  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||    
T  33162606 ttggttttggtccttgatattttgtgttaatccttgtaaaatcatttcatattgaaattggtccgtataatattca 33162531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 7029391 - 7029557
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||||||||||| |||||||||||||| |||||| ||| ||   | |||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  7029391 tatggaaatggttcctgcaaatatctggcgtttttgttctagtccctataaaaatatttttttggttttagtccctgcaaatatagaatatttggttttg 7029490  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  7029491 gtcttcggtattttgttttaatccttgtaaaatcatttcatattgaaattgatccctataatattca 7029557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 32315752 - 32315587
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||||||||||||||  |||||||||||   | | |||||||| |||||||||||||| |  | |||||||||||||||||||||||    
T  32315752 tatggaaatggtccctgcaaatatctgatattttggttttagtccctgtaaaaata-ttttttggttttaggccatacaaatatagaatatttggttttg 32315654  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  32315653 gtccttggtattttgttttaatctttgtaaaatcatttcatattgaaattggtccctataatattca 32315587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 42093771 - 42093606
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||||||||||||| ||||||| |||||   | ||||||| || ||||||| ||||| || |||||||||||||||||||| |||||    
T  42093771 tatggaaatggtccctgcaaatatctggcgttttgattttagtccctataaaa-tatttttttgtttttaatccctgcaaatatagaatatttgattttg 42093673  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  42093672 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtcccaataatattca 42093606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 55092201 - 55092379
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggt--tttagtctctgcaaatataga 155  Q
    |||||| || |||| ||||| |||||| ||||||||||||||||||||||| ||||| ||||||||| ||||||  |  |||||||  ||||||||||||    
T  55092201 aaggcttaaatatgaaaatgatccctgtaaatatctgacgttttggttttagtctct-ataaaaatattttttttttattttagtccgtgcaaatataga 55092299  T
Q  156 atatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  55092300 atatttggttttggtccttgatattttgttttaatccttgtaaaatcatttcatattgaaattggtctctataatattca 55092379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 49121721 - 49121888
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataatttt-ttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    ||||||||||||||||||||||||||| | ||||| ||||| | | |||||||||| |||| ||||||||||||  |||||||||| ||||||| |||||    
T  49121721 tatggaaatggtccctgcaaatatctggcattttgattttagcccctataaaaatactttttttggttttagtccatgcaaatataaaatatttagtttt 49121820  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  49121821 ggtccttgatattttgttttaatcattgtaaaattatttcatattgaaattggtccctataatattca 49121888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 69 - 232
Target Start/End: Complemental strand, 21323265 - 21323101
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||||||||||||  |||||||||||||   | ||||||  |  |||||||||||||||| |||||||||||||||||||||||||     
T  21323265 tatggaaatggtccctgcaaatatctagcgttttggttttagtccctataaatttttttttttggttttagtccctgcaaatatagaatatttggtttta 21323166  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattgg-tccctgtaatat 232  Q
     ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  21323165 atccttggtattttgttttaatccttataaaatcatttcatattgaaattggatccctataatat 21323101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 58 - 232
Target Start/End: Original strand, 17109846 - 17110020
Alignment:
Q  58 taaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaat 157  Q
    ||||||| || |||| |||| ||||||||||||||||||| |||||||||||   ||| |||||||| |||||||||||||||  ||||||||||| ||     
T  17109846 taaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttaatccttgtaaaaatatttttttggttttagtgcctgcaaatataaaaa 17109945  T
Q  158 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||||||||||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  17109946 atttggttttggtccttggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 17110020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 74 - 232
Target Start/End: Original strand, 32315387 - 32315545
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcc 172  Q
    |||| ||||||||||||||||||| ||||||||||| |||||  |||||||| ||||||| ||||||||  ||||||||||||| |||||||||||||||    
T  32315387 aaatagtccctgcaaatatctgacattttggttttagtctctg-taaaaatatttttttgattttagtccttgcaaatatagaaaatttggttttggtcc 32315485  T
Q  173 ttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||||||||| |||||||||||    ||||||||| | ||||||| ||||||||    
T  32315486 ttggtattttgttttagtccttgtaaaagtgattcatattggatttggtccttgtaatat 32315545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 49 - 232
Target Start/End: Complemental strand, 49500240 - 49500057
Alignment:
Q  49 ataaaaatataaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaa 148  Q
    ||||||| | |||||| || |||| |||| |||||||||||||| |||  |||||||||||   | | |||||||| ||||||||||||||||  |||||    
T  49500240 ataaaaaaaaaaggcttaaatatgaaaatagtccctgcaaatatttgatattttggttttagtccctgtaaaaatatttttttggttttagtccttgcaa 49500141  T
Q  149 atatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||   || |||||| | ||||||| ||||||||    
T  49500140 atataaaaaatttggttttggtccttggtattttgttttaatccttgtaaaattgatttatattggatttggtccttgtaatat 49500057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 232
Target Start/End: Complemental strand, 55092595 - 55092421
Alignment:
Q  58 taaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctct-tataaaaataattttttggttttagtctctgcaaatatagaa 156  Q
    ||||||| || |||| |||| |||||| |||||||||||| |||||||||||| ||| | |||||||| |||||||||||||||||||||||||||| ||    
T  55092595 taaggcttaaatatgaaaatagtccctccaaatatctgacattttggttttat-tctctgtaaaaatatttttttggttttagtctctgcaaatataaaa 55092497  T
Q  157 tatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
     ||||| |||||||||||||||| ||||||||||| |||||||||   ||||||||| | || |||| ||||||||    
T  55092496 aatttgattttggtccttggtatattgttttaatcattgtaaaattgattcatattggatttagtccttgtaatat 55092421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 232
Target Start/End: Complemental strand, 50645859 - 50645686
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| |||| ||||||| ||||||||||| |||| ||||||   | |||||||||| |||||||||||||||| ||||||||||| || |    
T  50645859 aaggcttaaatatgaaaatagtccctgtaaatatctgacattttagttttagtccctataaaaatatttttttggttttagtccctgcaaatataaaaaa 50645760  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||||||||| |||||||| |||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  50645759 tttggttttggtcctttgtattttgatttagtccttgtaaaattgattcatattggatttggtccttgtaatat 50645686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 59 - 231
Target Start/End: Original strand, 42093391 - 42093563
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| |||| ||| || | |||||||||| |||||| ||||   | | |||||||| |||||||||||||||||||||||||||| || |    
T  42093391 aaggcttaaatatgaaaatagtctctcctaatatctgacattttggatttagtccctgtaaaaatatttttttggttttagtctctgcaaatataaaaaa 42093490  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaata 231  Q
    |||||||||| ||||||||||||||||||| ||||||||||||   ||||||||| | ||||||| |||||||    
T  42093491 tttggttttgatccttggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaata 42093563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 17110228 - 17110062
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttg-gttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||| |||||||||  | |||||| |||||||| |||||||   | |||||||||| ||||||| ||||||||| |||  ||||||||||||||||| ||    
T  17110228 tatgaaaatggtcctcgtaaatatatgacgtttcggttttaatacatataaaaatatttttttgtgttttagtc-ctgtgaatatagaatatttggtctt 17110130  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
      || |||||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||    
T  17110129 aatctttggtattttgttttaattcttgtaaaatcatttcatattgaaattggtctctataatattca 17110062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 29838300 - 29838463
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||| ||||||||||||||||||  |||||||||||   | |  ||||||| |||||| ||||||||||||||||||||| || |||||||||||    
T  29838300 tatgaaaatagtccctgcaaatatctgatattttggttttagtccctgcaaaaatatttttttcgttttagtctctgcaaatataaaaaatttggttttg 29838399  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||| ||||||||||||| ||||||||||||   ||||||||| | || |||| ||||||||    
T  29838400 gtcctttgtattttgttttagtccttgtaaaattgattcatattggatttagtccttgtaatat 29838463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 59 - 201
Target Start/End: Original strand, 46962578 - 46962720
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| |||| ||||||||||||||||||  |||||||||||   | | |||||| |||||||||||||||||| ||||||||||| || |    
T  46962578 aaggcttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccctgtaaaaaaaattttttggttttagtccctgcaaatataaaaaa 46962677  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaat 201  Q
    ||||||||||||||||| |||||||||||| ||| ||||||||    
T  46962678 tttggttttggtccttgatattttgttttagtccctgtaaaat 46962720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 69 - 232
Target Start/End: Complemental strand, 52835922 - 52835759
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaata-attttttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||| |||| ||||||||||||||| | | |||||||||||  || | |||||||| |||||||  |||||||| ||||||||||| || ||||||||||    
T  52835922 tatgaaaatagtccctgcaaatatccgtcattttggttttag-tcctgtaaaaatatatttttttattttagtccctgcaaatataaaaaatttggtttt 52835824  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||| ||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  52835823 ggtccttcgtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 52835759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 74 - 201
Target Start/End: Original strand, 14545846 - 14545974
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata-tttggttttggtcc 172  Q
    |||| |||| |||||||||||||| |||||||||||   | | ||||| || ||||||| |||||||| ||||||||||| || | ||||||||||||||    
T  14545846 aaatagtccttgcaaatatctgacattttggttttagtccatgtaaaagtatttttttgattttagtccctgcaaatataaaaaaatttggttttggtcc 14545945  T
Q  173 ttggtattttgttttaatccttgtaaaat 201  Q
    |||||||||||||||| ||||||||||||    
T  14545946 ttggtattttgttttagtccttgtaaaat 14545974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 232
Target Start/End: Original strand, 26582635 - 26582781
Alignment:
Q  85 gcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgt 184  Q
    ||||||||||||  |||||||||||   | | |||||||| ||| ||||| |||||| |||||||||||||| |||||||||||||||||| ||||||||    
T  26582635 gcaaatatctgatattttggttttagtccctgtaaaaatattttgttggtgttagtc-ctgcaaatatagaaaatttggttttggtccttgatattttgt 26582733  T
Q  185 tttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||| ||||||||||||   ||||||||| | ||||||  ||||||||    
T  26582734 tttagtccttgtaaaattgattcatattggatttggtcattgtaatat 26582781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 201
Target Start/End: Complemental strand, 27934838 - 27934696
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| |||| ||||||||||||||||||| || ||||||||   |   |||||||| ||||||| |||||||| ||| ||||||| | |     
T  27934838 aaggcttaaatatgaaaatagtccctgcaaatatctgacattctggttttagtcccagtaaaaatatttttttgattttagtccctgtaaatataaattt 27934739  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaat 201  Q
    ||||||||||||||||| |||||||||||| ||||||||||||    
T  27934738 tttggttttggtccttgttattttgttttagtccttgtaaaat 27934696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 69 - 232
Target Start/End: Complemental strand, 38807915 - 38807752
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||| ||||||| ||||||||||| ||||| |||||   | | ||||||||  | ||||||||||||| ||||||||||| || |||||||||||    
T  38807915 tatggaaatagtccctgtaaatatctgacattttgattttagtccctgtaaaaatatatgtttggttttagtccctgcaaatataaaaaatttggttttg 38807816  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||  ||||||| ||||| || ||| |||||   ||||||||| | ||||||| ||||||||    
T  38807815 gtcctctgtattttattttagtctttgaaaaattgattcatattggatttggtccttgtaatat 38807752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 117 - 232
Target Start/End: Original strand, 889182 - 889297
Alignment:
Q  117 taaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaa 216  Q
    ||||||||  ||||||||||||||  | | ||||||| || ||||||||||||||||||||||||||||||| ||||||||||||   ||||||||| |     
T  889182 taaaaatatatttttggttttagttcccgtaaatataaaaaatttggttttggtccttggtattttgttttagtccttgtaaaattgattcatattggat 889281  T
Q  217 ttggtccctgtaatat 232  Q
    ||||||| | ||||||    
T  889282 ttggtccttataatat 889297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 232
Target Start/End: Original strand, 33162387 - 33162489
Alignment:
Q  130 ttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaa 229  Q
    |||||||||||| ||||||||  | || ||||||||||| ||||||||||||||||||| ||||||||||||   ||||||||| | ||||||| |||||    
T  33162387 ttggttttagtccctgcaaattaaaaaaatttggttttgatccttggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaa 33162486  T
Q  230 tat 232  Q
    |||    
T  33162487 tat 33162489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 125 - 232
Target Start/End: Complemental strand, 27285290 - 27285183
Alignment:
Q  125 attttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccc 224  Q
    ||||||| ||||||||| ||||||||||| ||  ||||||||||||| ||| |||||||||||| || |||||||||   ||||||||| | |||||||     
T  27285290 atttttttgttttagtccctgcaaatataaaaagtttggttttggtcattgatattttgttttagtctttgtaaaattgattcatattggatttggtcct 27285191  T
Q  225 tgtaatat 232  Q
    | ||||||    
T  27285190 tataatat 27285183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 157
Target Start/End: Original strand, 19590435 - 19590532
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaat 157  Q
    ||||| || |||||||| |||| ||||||||||||||||||||| ||||| || | |||||||||| |||||| ||||||||| ||| ||| |||||||    
T  19590435 aggcttaaatatggaaacggtctctgcaaatatctgacgttttgattttagtcgc-tataaaaatattttttttgttttagtccctgtaaaaatagaat 19590532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 51182065 - 51182170
Alignment:
Q  126 ttttttggttttagtctctgcaaatatag-aatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccc 224  Q
    ||||||| |||||||| |||||| ||||  ||| |||| |||||||||||| | |||||||||| || ||| |||||   || ||||| ||| |||||||    
T  51182065 ttttttgtttttagtccctgcaagtataccaatttttgcttttggtccttgttgttttgttttagtctttgcaaaatttattgatatttaaactggtccc 51182164  T
Q  225 tgtaat 230  Q
    ||||||    
T  51182165 tgtaat 51182170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 133; Significance: 3e-69; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 59 - 235
Target Start/End: Complemental strand, 20062185 - 20062009
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || ||||||||||||||||||||||||||| |||||||||||||   | |||||||||| ||||| |||||||||| ||||||||||||||||    
T  20062185 aaggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatattttttgggttttagtccctgcaaatatagaata 20062086  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20062085 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 20062009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 50624763 - 50624938
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || ||||||||||||||||||||||||||| ||| |||||||||   |||||| | ||| |||||||||||||||| |||||||||||||||||    
T  50624763 aggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtccttatatatatatttttttggttttagtccctgcaaatatagaatat 50624862  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50624863 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 50624938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 14602007 - 14602182
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || ||||||||||||||||||||||||||| |  ||||||||||   | |||||||||| |||||| ||||||||| |||||||||||||||||    
T  14602007 aggcttaaatatggaaatggtccctgcaaatatctggcactttggttttagtccatataaaaatatttttttagttttagtccctgcaaatatagaatat 14602106  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14602107 ttggttttgatccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 14602182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 26244546 - 26244721
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || ||||||||||||||||||||||||||||| |||||||||||   | | |||||||| |||||||| ||||||| |||||||||||||||||    
T  26244546 aggcttaaatatggaaatggtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggatttagtccctgcaaatatagaatat 26244645  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26244646 ttgattttggtccttggtatttagttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 26244721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 28031644 - 28031819
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || ||||||||||||||||||||||||||| |||||| ||||||   ||||||||| || |||||||||||||||| ||||||||||| |||||    
T  28031644 aggcttaaatatggaaatggtccctgcaaatatctggcgttttagttttagtccttataaaattatttttttggttttagtccctgcaaatatataatat 28031743  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  28031744 ttggttttggtccttgatattttgttttaatccttgtaaaatcatttcatattgaaattggtccttataatattca 28031819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 33619282 - 33619107
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||||||||||||||||||||||||||  ||||||||||||  || |||||||||| |||||||||||||||| || ||||||||||||||    
T  33619282 aggcttaaatatggaaatggtccctgcaaatatctggtgttttggttttagttcctataaaaatatttttttggttttagtccctacaaatatagaatat 33619183  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||    
T  33619182 ttggttttggtcctttgtattttgttttaatccttgtaaaatcatttcttattgagattggtccctataatattca 33619107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 50096139 - 50096305
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||| ||||||||||||||||||| |||||||||||   | | |||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  50096139 tatggaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatatagaatatttggttttg 50096238  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
     ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  50096239 atccttggtattttgttttaatccttgtaaaatcattttatattgaaattggtccctataatattca 50096305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 80 - 235
Target Start/End: Original strand, 33574 - 33729
Alignment:
Q  80 tccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtat 179  Q
    ||||||||||||||||||||||||||||||   | |||||||||| |||| | ||||||||||||||||||||| |||||||||||||||||||||||||    
T  33574 tccctgcaaatatctgacgttttggttttagtccctataaaaatatttttctagttttagtctctgcaaatataaaatatttggttttggtccttggtat 33673  T
Q  180 tttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  33674 tttgttttaatccttgtaaaatcatttcatattgaaaatggtccctataatattca 33729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 71 - 231
Target Start/End: Original strand, 18963617 - 18963777
Alignment:
Q  71 tggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggt 170  Q
    ||||||||||||||||||||||| | |||||||||||||   | |||||||||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  18963617 tggaaatggtccctgcaaatatccggcgttttggttttagtccctataaaaatatttttttggttttagtccttgcaaatatagaatatttggttttggt 18963716  T
Q  171 ccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaata 231  Q
    | ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18963717 cattgttattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataata 18963777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 74 - 235
Target Start/End: Complemental strand, 39288527 - 39288365
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaata-attttttggttttagtctctgcaaatatagaatatttggttttggtcc 172  Q
    ||||||||||||||||||||||||||||| ||||||   |||||||||||| ||||||| |||||||||  | |||||| ||||||||||||||||||||    
T  39288527 aaatggtccctgcaaatatctgacgttttagttttaatccttataaaaatatatttttttgttttagtccattcaaataaagaatatttggttttggtcc 39288428  T
Q  173 ttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  39288427 ttggtattttgttttaatctttgtaaaatcatttcatattgaaattggtccctataatattca 39288365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 58 - 235
Target Start/End: Complemental strand, 43192044 - 43191867
Alignment:
Q  58 taaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaat 157  Q
    ||||||| || |||| | ||||||| || ||||||||| | |||||| ||||  || |||||||||| |||||||||||||||  |||||||||||||||    
T  43192044 taaggcttaaatatgaatatggtccatgtaaatatctggcattttggatttagttcctataaaaatatttttttggttttagttcctgcaaatatagaat 43191945  T
Q  158 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  43191944 atttggttttggtccttggtattttgttttgatccttgtaaaatcatttcatattgaaattggtccctataatattca 43191867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 12322089 - 12322264
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||| |||||||| ||| |||||||||||||||||||||||   | |||||||||| ||||||||| |||||| || ||||||||||||||    
T  12322089 aggcttaaatatgaaaatggtctctgtaaatatctgacgttttggttttagtccctataaaaatatttttttggtattagtccctacaaatatagaatat 12322188  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  12322189 ttggttttggtcctaggtatattgttttaatccttgtaaaatcatttcatattgaaattggtctctataatattca 12322264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 10913781 - 10913946
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||||||||||||| ||||||||| ||  ||||||||||||   | |||||| ||| |||||||||||||||| ||||||||||||||||||||||||||    
T  10913781 tatggaaatggtccatgcaaatatttgg-gttttggttttaatccctataaagatatttttttggttttagtccctgcaaatatagaatatttggttttg 10913879  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  10913880 gtcattgatattttgttttaatccttgtaaaatcatttcatattgagattggtccctataatattca 10913946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 58 - 235
Target Start/End: Original strand, 47828958 - 47829134
Alignment:
Q  58 taaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaat 157  Q
    ||||||| || |||||||||| |||||| ||||||  | | |||||| ||||   | |||||||||| ||||||| |||||||| |||||||||||||||    
T  47828958 taaggcttaaatatggaaatgatccctgtaaatatacggcattttggatttagtccctataaaaatatttttttg-ttttagtccctgcaaatatagaat 47829056  T
Q  158 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  47829057 atttggttttggtccttggtattttcttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 47829134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 37172625 - 37172459
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||||| |||||||| | ||||||||| ||||||| |||||   | |||||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  37172625 tatggacatggtcccggtaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgcgaatatagaatatttggttttg 37172526  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||| ||||||||||||||||||| |||||||||||||||||||| | |||||||||| |||||||||    
T  37172525 gtctttggtattttgttttaatcattgtaaaatcatttcatattaatattggtccctataatattca 37172459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 42154815 - 42154922
Alignment:
Q  128 ttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgt 227  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  42154815 ttttggttttagtccctgcaaatatagaatatttagttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaactggtccctat 42154914  T
Q  228 aatattca 235  Q
    ||||||||    
T  42154915 aatattca 42154922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 74 - 232
Target Start/End: Complemental strand, 50096505 - 50096347
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcct 173  Q
    |||| ||||||||||||||||||| |||||||||     | | ||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||    
T  50096505 aaatagtccctgcaaatatctgacattttggtttaggtccgtgtaaaaataattttttggttttagtccctacaaatatagaaaatttggttttggtcct 50096406  T
Q  174 tggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||||| ||||||||||||   ||||||||||| ||||||| ||||||||    
T  50096405 tggtattttgttttagtccttgtaaaattgattcatattgaatttggtccttgtaatat 50096347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 59 - 232
Target Start/End: Original strand, 20061794 - 20061967
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| |||| ||||||||||||||||||| |||||||||||   | | |||||||| |||||||||||||||| ||||||||||| || |    
T  20061794 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaa 20061893  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||| ||||||||||||||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  20061894 tttgattttggtccttggtattttgttttactccttgtaaaattgattcatattggatttggtccttgtaatat 20061967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 59 - 232
Target Start/End: Complemental strand, 28032034 - 28031861
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| |||| ||||||||||||||||||| |||||||||||   | | |||||||| |||||| ||||||||| ||||||||||| ||      
T  28032034 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttagttttagtccctgcaaatataaaaat 28031935  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||||||||||||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  28031934 tttggttttggtccttggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 28031861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 233
Target Start/End: Complemental strand, 42155137 - 42154963
Alignment:
Q  58 taaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaat 157  Q
    ||||||| || |||| |||| ||||||| ||||||||||| |||||||||||  || | |||||||| |||||||||||||||| ||||||||||| ||     
T  42155137 taaggcttaaatatgaaaatagtccctgtaaatatctgacattttggttttagatcctgtaaaaata-ttttttggttttagtccctgcaaatataaaaa 42155039  T
Q  158 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatatt 233  Q
    |||||||||||||||||| |||||||||||| ||||| ||||||   ||||||||| | ||||||| |||||||||    
T  42155038 atttggttttggtccttgatattttgttttagtccttataaaattgattcatattggatttggtccttgtaatatt 42154963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 26244913 - 26244763
Alignment:
Q  82 cctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtatt 180  Q
    |||||||||||||||| ||||||||||| || || | ||||||| ||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||    
T  26244913 cctgcaaatatctgacattttggttttaatccctga-aaaaatatttttttgattttagtccctgcaaatatagaaaatttggttttgatccttggtatt 26244815  T
Q  181 ttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||| || |||||||||   ||||||||| | ||||||| ||||||||    
T  26244814 ttgttttagtcattgtaaaattgattcatattggatttggtccttgtaatat 26244763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 43191662 - 43191825
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||| ||||||||||||||||||  |||| ||||||   | | |||||||| |||||||||||||||| ||||||||||| || | |||||||||    
T  43191662 tatgaaaattgtccctgcaaatatctgatattttagttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaaattggttttg 43191761  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||||||||||||| ||||||||||||   ||||||||| | ||||||  ||||||||    
T  43191762 gtccttggtattttgttttagtccttgtaaaattgattcatattggatttggtctttgtaatat 43191825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 92 - 232
Target Start/End: Complemental strand, 10914128 - 10913988
Alignment:
Q  92 tctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatc 191  Q
    |||||| |||||||||||   | | |||||||| |||||||||||||||| |||||||||||  | ||||||||||||||||||||||||||||| | ||    
T  10914128 tctgacattttggttttagtccgtgtaaaaatatttttttggttttagtccctgcaaatataacaaatttggttttggtccttggtattttgtttcagtc 10914029  T
Q  192 cttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||   ||||||||| ||||||||| ||||||||    
T  10914028 cttgtaaaattgattcatattggaattggtccttgtaatat 10913988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 86 - 232
Target Start/End: Complemental strand, 33917 - 33771
Alignment:
Q  86 caaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgtt 185  Q
    |||||||||||| |||||||||||   | | |||||||| ||||||||||||| |||||| ||||||| || ||||||||||||||||||||||||| ||    
T  33917 caaatatctgacattttggttttagtccctgtaaaaatatttttttggttttattctctgtaaatataaaaaatttggttttggtccttggtattttatt 33818  T
Q  186 ttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||| ||||||||||||   ||||||||| | || |||| ||||||||    
T  33817 ttagtccttgtaaaattgattcatattggattttgtccttgtaatat 33771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 232
Target Start/End: Original strand, 37172244 - 37172417
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| |||| ||| ||||||||||||| | |||||||||||   | | ||||||||  |||||| |||||||| || |||||||| || |    
T  37172244 aaggcttaaatatgaaaatagtctctgcaaatatctgtcattttggttttagtccctgtaaaaatatatttttgattttagtcccttcaaatataaaaaa 37172343  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||| ||||| ||||||||||||||||||||||||||||||||   ||||||||| | ||||||| ||||||||    
T  37172344 tttgattttgatccttggtattttgttttaatccttgtaaaattgattcatattggatttggtccttgtaatat 37172417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 50625150 - 50624980
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||| |||| ||||||||||||||||||| |||||||||||   | | |||||| || |||  |||||||||| ||||||||||| || ||    
T  50625150 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaaaaaattt--ggttttagtccctgcaaatataaaaaat 50625053  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||||||||||||||||||| ||| ||||||||   ||||||||| | | ||||| ||||||||    
T  50625052 ttggttttggtccttggtattttgttttagtccctgtaaaattgattcatattggattcggtccttgtaatat 50624980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 185
Target Start/End: Complemental strand, 39027733 - 39027606
Alignment:
Q  58 taaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaat 157  Q
    ||||||| || |||||||||||||||||||||||| |||  |||| ||||||   |||||||||    ||||||| ||||||||| ||||||||||||||    
T  39027733 taaggcttaaatatggaaatggtccctgcaaatatttgatattttagttttagtccttataaaatattttttttgattttagtctttgcaaatatagaat 39027634  T
Q  158 atttggttttggtccttggtattttgtt 185  Q
    |||||||||| |||||||||||||||||    
T  39027633 atttggttttagtccttggtattttgtt 39027606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 233
Target Start/End: Complemental strand, 14602394 - 14602223
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||| |||| ||||||||||||||||||| |||||||||||   | |||||   |  |||||| ||||||||| ||||||||||| || |     
T  14602394 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttaatccctataatttt--ttttttagttttagtccctgcaaatataaaaaaa 14602297  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatatt 233  Q
    |||||||||||||||| |||||||||||| ||||||||||||   ||||||||| | ||||||| |||||||||    
T  14602296 ttggttttggtccttgttattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatatt 14602223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 166
Target Start/End: Original strand, 50616936 - 50617042
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || ||||||||||||||||||||||||||| ||| |||||||||   |||||| | ||| |||||||||||||||| |||||||||||||||||    
T  50616936 aggcttaaatatggaaatggtccctgcaaatatctggcgtattggttttagtccttatatatatatttttttggttttagtccctgcaaatatagaatat 50617035  T
Q  160 ttggttt 166  Q
    |||||||    
T  50617036 ttggttt 50617042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 232
Target Start/End: Complemental strand, 47829337 - 47829176
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||| ||||||||||||||||||| |||||||||||  || | |||   |  |||||  ||||||||| ||||||||||| || | |||||||||    
T  47829337 tatgaaaattgtccctgcaaatatctgacattttggttttagttcctgtaatttttgttttt--gttttagtccctgcaaatataaaaaaattggttttg 47829240  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||| |||||||||||| ||||||||||||   ||||||||||| ||||||| ||||||||    
T  47829239 gtccttgatattttgttttagtccttgtaaaattgattcatattgaatttggtccttgtaatat 47829176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 39027492 - 39027607
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcct 173  Q
    |||| ||||| | ||||||||||| ||||| |||||   | | |||||||| |||||||||||||||| ||||||||||| || ||||||||||| ||||    
T  39027492 aaatagtccccggaaatatctgacattttgcttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttggttttgatcct 39027591  T
Q  174 tggtattttgttttaa 189  Q
    ||||||||||||||||    
T  39027592 tggtattttgttttaa 39027607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 231
Target Start/End: Original strand, 39288149 - 39288322
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttgg-ttttagtctctgcaaatatagaat 157  Q
    ||||| || |||| |||| |||||| ||||||| |||| ||||| ||||| |||||  |||||||| |||||| | |||||||| ||||||||||| ||     
T  39288149 aggcttaaatatgaaaatagtccctccaaatatatgacattttgattttagtctctg-taaaaatattttttttgattttagtcactgcaaatataaaaa 39288247  T
Q  158 attt-ggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaata 231  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||   ||||||||| | ||||||  |||||||    
T  39288248 attttggttttggtccttggtattttgttttagtccttgtaaaatagattcatattggatttggtctttgtaata 39288322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 232
Target Start/End: Original strand, 33618973 - 33619065
Alignment:
Q  140 tctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||  || |||||||||   ||||||||| | ||||||| ||||||||    
T  33618973 tctctgcaaatataaaatatttggttttggtcgttggtattttgttttcgtctttgtaaaattgattcatattggatttggtccttgtaatat 33619065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 12322412 - 12322306
Alignment:
Q  126 ttttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccct 225  Q
    ||||||| |||||||| ||||||||  | || |||||||||||||||||| |||||||||||| ||||||||||||   ||||||||  | ||||||| |    
T  12322412 ttttttgattttagtccctgcaaattaaaaaaatttggttttggtccttgatattttgttttagtccttgtaaaattgattcatattagatttggtcctt 12322313  T
Q  226 gtaatat 232  Q
    |||||||    
T  12322312 gtaatat 12322306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 51999546 - 51999622
Alignment:
Q  134 ttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcata 210  Q
    |||||||||||  ||||||| || ||||||||||  |||||| |||||||||||| |||||||||||||||||||||    
T  51999546 ttttagtctctagaaatataaaaaatttggttttaatccttgatattttgttttagtccttgtaaaatcatttcata 51999622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 44561602 - 44561709
Alignment:
Q  127 tttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctg 226  Q
    |||||||||| | ||  ||||||||||||||||||  ||||| ||||| || |||| ||||| | | |||||| ||  |||||||| |||||||||| ||    
T  44561602 tttttggtttcaatccttgcaaatatagaatattttattttgatccttagtgttttattttagtacctgtaaa-tctattcatattaaaattggtccttg 44561700  T
Q  227 taatattca 235  Q
    |||||||||    
T  44561701 taatattca 44561709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817 (Bit Score: 129; Significance: 7e-67; HSPs: 2)
Name: scaffold0817
Description:

Target: scaffold0817; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 3979 - 4155
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || ||||||||||||||||||||||||||| |||||||||||||   | |||||||||| |||||||||||||||| ||| |||||||||| |    
T  3979 aaggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatttttttggttttagtccctgtaaatatagaaaa 4078  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4079 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 4155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 58 - 201
Target Start/End: Complemental strand, 4370 - 4227
Alignment:
Q  58 taaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaat 157  Q
    ||||||| || |||| |||| ||||||||||||||||||| |||||||||||   | | |||||||| |||||||||||||||| ||||||||||| ||     
T  4370 taaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaa 4271  T
Q  158 atttggttttggtccttggtattttgttttaatccttgtaaaat 201  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  4270 atttggttttggtccttggtattttgttttagtccttgtaaaat 4227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 7e-67; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 31717171 - 31717347
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||||||||||||||||||||||| ||||||||||||||||   | |||||||||| ||||||||||||||||  |||||||||||||||    
T  31717171 aaggcttaaatatggaaatggtccctgcaaatatttgacgttttggttttaatccctataaaaatatttttttggttttagtccatgcaaatatagaata 31717270  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  31717271 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccatataatattca 31717347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 59 - 235
Target Start/End: Complemental strand, 19661736 - 19661560
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||||||||||||| |||||||||||| |||||||||||||   | |||||||||| ||||||| |||||||| ||||||||||||||||    
T  19661736 aaggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctataaaaatatttttttgattttagtccctgcaaatatagaata 19661637  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  19661636 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatgttgaaattggtccctataatattca 19661560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 8926193 - 8926359
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||| | |||||||||| ||||||||||||||   | |||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  8926193 tatggaaatggtctccgcaaatatcttacgttttggttttagtccctataaaaatatttttttggttttagtccctgcaaaaatagaatatttggttttg 8926292  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8926293 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 8926359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 8936450 - 8936616
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||| | |||||||||| ||||||||||||||   | |||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  8936450 tatggaaatggtctccgcaaatatcttacgttttggttttagtccctataaaaatatttttttggttttagtccctgcaaaaatagaatatttggttttg 8936549  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8936550 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 8936616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 3345405 - 3345230
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || ||||||||||||||||||||||||||| |||||||||||||   | |||||||||| |||||||||||||||  ||| |||||||||| ||    
T  3345405 aggcttaaatatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatttttttggttttagttcctgtaaatatagaacat 3345306  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3345305 ttggttttggtccttagtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 3345230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 5923832 - 5923999
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataatttt-ttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    ||||||||||||||||||||||||||  |||||||||||||   | |||||||||| |||| |||||||||||| ||||||| |||||||||||||||||    
T  5923832 tatggaaatggtccctgcaaatatcttgcgttttggttttagtccctataaaaatattttttttggttttagtccctgcaaaaatagaatatttggtttt 5923931  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  5923932 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctagaatattca 5923999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 30609243 - 30609077
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| ||||||||||||||||||||||  ||||||||||||   | |||||||||| ||||| ||||||||||  |||||||||| ||||||||||||||    
T  30609243 tatgaaaatggtccctgcaaatatctggtgttttggttttagtccctataaaaatattttttgggttttagtccatgcaaatatataatatttggttttg 30609144  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30609143 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 30609077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 69 - 234
Target Start/End: Complemental strand, 33783775 - 33783609
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataatttttt-ggttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||||||||| |||||||||||||||| ||||| |||||||   |   |||||||| |||||| |||||||||| |||||||||||||||||||||||||    
T  33783775 tatggaaatgatccctgcaaatatctggcgtttcggttttagtccccctaaaaatattttttttggttttagtccctgcaaatatagaatatttggtttt 33783676  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattc 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33783675 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattc 33783609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 3484789 - 3484956
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctct-tataaaaataatttt-ttggttttagtctctgcaaatatagaatatttggttt 166  Q
    |||||||||| ||||||||||||||| || |||||||||||  ||| | |||||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  3484789 tatggaaatgatccctgcaaatatctaacattttggttttag-tctgtgtaaaaatattttttttggttttagtccctgcaaatatagaatatttggttt 3484887  T
Q  167 tggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  3484888 tggtccttggtattttgttttaatcattgtaaaatcatttcatattgaaattggtccctataatattca 3484956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 28853490 - 28853657
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataatttt-ttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    ||||||||||||| || ||||||| || |||||||||||||   | | |||||||| |||| |||||||||||| ||||||||||||||||||| |||||    
T  28853490 tatggaaatggtcactacaaatatttggcgttttggttttagtccctgtaaaaatattttttttggttttagtccctgcaaatatagaatatttagtttt 28853589  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  28853590 ggtccttggtattttgttttaatccttctaaaatcatttcatattgaaattggtccatataatattca 28853657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 29819451 - 29819558
Alignment:
Q  128 ttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgt 227  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  29819451 ttttggttttagtccctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctat 29819550  T
Q  228 aatattca 235  Q
    ||||||||    
T  29819551 aatattca 29819558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 74 - 232
Target Start/End: Complemental strand, 17238406 - 17238248
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcct 173  Q
    |||| ||||||||||||||||||| |||||||||||   | | ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  17238406 aaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaataattttttggttttagtccctgcaaatatagaaaatttggttttggtcct 17238307  T
Q  174 tggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||||| ||||||||||||   ||||||||||| ||||||| ||||||||    
T  17238306 tggtattttgttttagtccttgtaaaattgattcatattgaatttggtccttgtaatat 17238248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 17238038 - 17238206
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctc--tgcaaatatagaatatttggttt 166  Q
    |||||||||| |||||||||||||||||  |||||||||||   | |  |||| |  ||||||||||||||| ||  | |||||||||||||||||||||    
T  17238038 tatggaaatgatccctgcaaatatctgatattttggttttagtccctgcaaaattttttttttggttttagtatccctacaaatatagaatatttggttt 17238137  T
Q  167 tggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  17238138 tggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtcccaataatattca 17238206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 219
Target Start/End: Original strand, 16525202 - 16525349
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||| ||||||||||||||||||||||||| |||||   | |||||   |  |||||||||||||||| ||||||||||| |||||||||||||     
T  16525202 tatggaaatagtccctgcaaatatctgacgttttgcttttaatccctataa---tttttttttggttttagtccctgcaaatataaaatatttggttttt 16525298  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattg 219  Q
     || |||||||||||||||||||||||||||||||||||||||||||||||    
T  16525299 atctttggtattttgttttaatccttgtaaaatcatttcatattgaaattg 16525349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 19661356 - 19661518
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||| ||||||||||||||||||| |||||||||||  |  | |||||||| |||||||||||||||| ||||||||||| || ||||| |||||    
T  19661356 tatgaaaatagtccctgcaaatatctgacattttggttttagtttctgtaaaaata-ttttttggttttagtccctgcaaatataaaaaatttgattttg 19661454  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||||||||||||| || |||||||||   ||||||||||| ||||||| ||||||||    
T  19661455 gtccttggtattttgttttagtctttgtaaaattgattcatattgaatttggtccttgtaatat 19661518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 59 - 232
Target Start/End: Complemental strand, 5404957 - 5404784
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaat 157  Q
    |||||| || |||| |||| ||||||||||||||||||| ||||||||||| ||||| ||||||||| ||||||| |||||||| ||||||||||| ||     
T  5404957 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtctct-ataaaaatatttttttgattttagtccctgcaaatataaaaa 5404859  T
Q  158 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||||||| || ||||||||||||| ||||||||||||   ||||||||| | | ||||| ||||||||    
T  5404858 atttggttttggtcattagtattttgttttagtccttgtaaaattgattcatattggattcggtccttgtaatat 5404784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 232
Target Start/End: Original strand, 30608862 - 30609035
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| |||| |||||||||||||| |||  |||| ||||||   | | |||||||| |||||||||||||||| ||||||||||| || |    
T  30608862 aaggcttaaatatgaaaatagtccctgcaaatatttgatattttagttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaa 30608961  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||||||||||||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  30608962 tttggttttggtccttggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 30609035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 3345026 - 3345189
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||| ||||||||| ||||||||  |||||||||||   ||| |||||||| |||||| ||||||||| ||||||||||| || |||||||||||    
T  3345026 tatgaaaatagtccctgcagatatctgatattttggttttagtccttgtaaaaatatttttttcgttttagtccctgcaaatataaaaaatttggttttg 3345125  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||||||||||||| | ||||||||||   ||||||||| | ||||||| ||||||||    
T  3345126 gtccttggtattttgttttacttcttgtaaaattgattcatattggatttggtccttgtaatat 3345189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 57 - 232
Target Start/End: Complemental strand, 26272369 - 26272194
Alignment:
Q  57 ataaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaa 156  Q
    |||||||| || |||| |||| ||||||| ||||||||||| |||||||||||   | ||||||||||  ||||||||||||||  ||||||||||| ||    
T  26272369 ataaggcttaaatatgaaaatagtccctgtaaatatctgacattttggttttagtccctataaaaatatatttttggttttagttcctgcaaatataaaa 26272270  T
Q  157 tatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
     ||||| |||||||||||||||| |||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  26272269 aatttgattttggtccttggtatattgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 26272194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 232
Target Start/End: Complemental strand, 16525589 - 16525407
Alignment:
Q  50 taaaaatataaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaa 149  Q
    |||||||| | |||| || |||| |||| ||| | ||||||||||||| |||||| ||||   ||| |||||||| |||||| ||||||||| ||| |||    
T  16525589 taaaaataaatggcttaaatatgaaaatcgtctccgcaaatatctgacattttggatttagtccttgtaaaaatattttttttgttttagtccctgtaaa 16525490  T
Q  150 tatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||| || ||||||||||||||||| ||||||||||||||||||||||||||   ||||||||| | ||||||| ||||||||    
T  16525489 tataaaaaatttggttttggtccttcgtattttgttttaatccttgtaaaattgattcatattggatttggtccttgtaatat 16525407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 74 - 201
Target Start/End: Complemental strand, 28853857 - 28853730
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcct 173  Q
    |||| |||||| |||||||||||| |||||||||||   | |||||||||| |||||||||||||||  ||||||||||| || ||||||||||||||||    
T  28853857 aaatagtccctacaaatatctgacattttggttttagtccctataaaaatatttttttggttttagttcctgcaaatataaaaaatttggttttggtcct 28853758  T
Q  174 tggtattttgttttaatccttgtaaaat 201  Q
    || |||||||||||| ||||||||||||    
T  28853757 tgatattttgttttagtccttgtaaaat 28853730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 5404666 - 5404742
Alignment:
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  5404666 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattagtccctataatattca 5404742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 69 - 232
Target Start/End: Complemental strand, 5924205 - 5924041
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttg-gttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||| |||| ||||||||||||||||||| |||||||||||  || | |||||||| ||||||  ||||||||| || |||||||| || ||||||||||    
T  5924205 tatgaaaatagtccctgcaaatatctgacattttggttttagttcctgtaaaaatatttttttatgttttagtccctacaaatataaaaaatttggtttt 5924106  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||| ||||||||||||| ||||||||||||   |||||| || | ||||||| ||||||||    
T  5924105 ggtcctttgtattttgttttagtccttgtaaaattgattcataatggatttggtccttgtaatat 5924041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 69 - 232
Target Start/End: Complemental strand, 8926566 - 8926401
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||| ||||| | ||||||||||| |||||||||||   | | |||||||| |||||||||||||||| ||||||||||| || |||||||||||    
T  8926566 tatgaaaatagtcccggtaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttggttttg 8926467  T
Q  169 gtccttgg--tattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||| |  |||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  8926466 gtcctttgtatattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 8926401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 69 - 232
Target Start/End: Complemental strand, 8936823 - 8936658
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||| ||||| | ||||||||||| |||||||||||   | | |||||||| |||||||||||||||| ||||||||||| || |||||||||||    
T  8936823 tatgaaaatagtcccggtaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttggttttg 8936724  T
Q  169 gtccttgg--tattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||| |  |||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  8936723 gtcctttgtatattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 8936658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 201
Target Start/End: Complemental strand, 3485146 - 3485019
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcct 173  Q
    |||| |||||||||||||| |||| |||||||||||   | |  ||||||| ||||||| |||||||| ||||||||||| || |||||||||||||| |    
T  3485146 aaatagtccctgcaaatatgtgacattttggttttagtccctgcaaaaatatttttttgattttagtccctgcaaatataaaaaatttggttttggtctt 3485047  T
Q  174 tggtattttgttttaatccttgtaaaat 201  Q
    ||||||||||||||| ||||||||||||    
T  3485046 tggtattttgttttagtccttgtaaaat 3485019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 169
Target Start/End: Original strand, 5140696 - 5140796
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||||||||||||||| |||||||||||   | || ||||||| ||||||| |||||||| ||||||||||| ||||||||||||||    
T  5140696 tatggaaatggtccctgcaaatatctgacattttggttttagtccctacaaaaatatttttttgattttagtccctgcaaatatataatatttggttttg 5140795  T
Q  169 g 169  Q
    |    
T  5140796 g 5140796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 31717493 - 31717389
Alignment:
Q  128 ttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgt 227  Q
    |||||||||||||| |||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||||   ||||||||| | ||||||| |||    
T  31717493 ttttggttttagtccctgcaaatataacaaatttggttttggtccttggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgt 31717394  T
Q  228 aatat 232  Q
    |||||    
T  31717393 aatat 31717389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 215
Target Start/End: Complemental strand, 9571782 - 9571627
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||| |||| |||| |||||||||||||| |||| ||||||   | | |||||||| |||||||||||||||| ||||||||||  || ||    
T  9571782 aggcttaaatatgaaaatagtccttgcaaatatctgacattttagttttagtccctgtaaaaatatttttttggttttagtccctgcaaatatgaaaaat 9571683  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaa 215  Q
    ||| ||||| ||||| ||||||||||||| ||||||||||||   |||||||||||    
T  9571682 ttgattttgatccttcgtattttgttttagtccttgtaaaattgattcatattgaa 9571627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 171
Target Start/End: Complemental strand, 5409282 - 5409170
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaat 157  Q
    |||||| || |||| |||| ||||||||||||||||||| ||||||||||| ||||| ||||||||| ||||||| |||||||| ||||||||||| ||     
T  5409282 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtctct-ataaaaatatttttttgattttagtccctgcaaatataaaaa 5409184  T
Q  158 atttggttttggtc 171  Q
    ||||||||||||||    
T  5409183 atttggttttggtc 5409170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 33783412 - 33783562
Alignment:
Q  79 gtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttg-gttttagtctctgcaaatatagaatatttggttttggtccttggt 177  Q
    ||||||||||||||||||  ||||||||| |  || | |||||||| ||||||  |||||||||  |||||||||| || ||||||||||||| |||| |    
T  33783412 gtccctgcaaatatctgatattttggtttcaattcctgtaaaaatattttttttagttttagtccttgcaaatataaaaaatttggttttggttcttgat 33783511  T
Q  178 attttgttttaatccttgtaaaatcatttcatattgaaattggtccctgta 228  Q
    ||||||||||  ||||||||||||   ||||||||||| ||||||| ||||    
T  33783512 attttgtttttgtccttgtaaaattgattcatattgaatttggtccttgta 33783562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 232
Target Start/End: Complemental strand, 29819715 - 29819600
Alignment:
Q  117 taaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaa 216  Q
    |||||| | ||||||| ||||||||   ||||||||| || |||||||||||||| |||||||||||||||| ||||||||||||    |||||||| |     
T  29819715 taaaaacatttttttgattttagtccaagcaaatataaaaaatttggttttggtcattggtattttgttttagtccttgtaaaattggatcatattggat 29819616  T
Q  217 ttggtccctgtaatat 232  Q
    ||||||| ||||||||    
T  29819615 ttggtccttgtaatat 29819600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 29819412 - 29819461
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggtttta 109  Q
    ||||| || ||||||||||||||||||||||||||| |||||||||||||    
T  29819412 aggcttaaatatggaaatggtccctgcaaatatctggcgttttggtttta 29819461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 5404606 - 5404674
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggtttt 137  Q
    ||||||||||||||||||||||||||| | ||||| |||||   | |||||||||| ||||||||||||    
T  5404606 tatggaaatggtccctgcaaatatctggcattttgattttagtccctataaaaatatttttttggtttt 5404674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 7e-67; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 59 - 235
Target Start/End: Complemental strand, 10461732 - 10461556
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || ||||||||||||||||||||||||||| ||||||| |||||   | |||||||||| |||||||||||||||| ||||||||||||||||    
T  10461732 aaggcttaaatatggaaatggtccctgcaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgcaaatatagaata 10461633  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10461632 tttggttttggtcattggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 10461556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 18786357 - 18786192
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||||||||||||| |||||||||||||   | | |||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  18786357 tatggaaatggtccctgcaaatatctggcgttttggttttagtccctgtaaaaatatttttttggttttagtc-ctgcaaatatagaatatttggttttg 18786259  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  18786258 gtccttggtattttgttttaatccttgtaaaatcatttcatattaaaattggtccctataatattca 18786192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 15969427 - 15969602
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||||||||||||| | ||||||| || |||||||||||||   | ||||||||||  |||||||||||||||||||||||||||||||||    
T  15969427 aggcttaaatatggaaatggtccttacaaatatttggcgttttggttttagtccctataaaaatatatttttggttttagtctctgcaaatatagaatat 15969526  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  15969527 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccttataatattca 15969602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 58 - 233
Target Start/End: Complemental strand, 43197289 - 43197114
Alignment:
Q  58 taaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaat 157  Q
    ||||||| || |||||||||||||||||||||||||||  ||||| ||||||   | |||||||||| ||||||| |||||||| |||||||||||||||    
T  43197289 taaggcttaaatatggaaatggtccctgcaaatatctggtgtttttgttttagtccctataaaaatatttttttgtttttagtccctgcaaatatagaat 43197190  T
Q  158 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatatt 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  43197189 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattaaaattggtccctataatatt 43197114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 69 - 234
Target Start/End: Original strand, 3598419 - 3598584
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||||||||||||||||||||||| |||||| ||||   | | |||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  3598419 tatgaaaatggtccctgcaaatatctgacattttggatttagtccctgtaaaaatatttttttggttttagtccctgcaaatatagaatatttggttttg 3598518  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattc 234  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  3598519 gtccttggtattttgttttaattcttgtaaaatcatttcatattgaaattggtccctataatattc 3598584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 41137147 - 41137313
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||||||||| || ||||||||||||| |||||||||||||   | |||||||||| ||||||||||||||||  |||||||||||||||||| ||||||    
T  41137147 tatggaaatgatcactgcaaatatctggcgttttggttttaatacctataaaaatatttttttggttttagtccttgcaaatatagaatatttagttttg 41137246  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  41137247 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaatcggtccctataatattca 41137313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 59 - 235
Target Start/End: Complemental strand, 5933512 - 5933336
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| |||||||||||| ||||||||  |||||||| ||||  || ||||||||||  ||||| ||||||||| ||||||||||||||||    
T  5933512 aaggcttaaatatgaaaatggtccctgtaaatatctagcgttttggatttagttcctataaaaatatattttttgttttagtccctgcaaatatagaata 5933413  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  5933412 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaatcggtccctataatattca 5933336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 59 - 235
Target Start/End: Complemental strand, 24491230 - 24491054
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || ||||||||||||||||||||  ||||||| |||||||||||   | | |||||||| || ||||||||||||| ||||||||||||||||    
T  24491230 aaggcttaaatatggaaatggtccctgcaataatctgacattttggttttagtccctgtaaaaatatttgtttggttttagtccctgcaaatatagaata 24491131  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  24491130 tttggttttggtccttgatattttgttttagtccttgtaaaatcatttcatattgaaattggtccctataatattca 24491054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 6497198 - 6497364
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||| ||| |||||| || |||||||  ||||   |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||    
T  6497198 tatggaaatggtctctgtaaatatttggcgttttgaatttagtccttataaaaatatttttttgattttagtccctgcaaatatagaatatttggttttg 6497297  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  6497298 gtccttggtattttgttttaatccttataaaatcatttcatattgaaattggtccctataatattca 6497364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 69 - 233
Target Start/End: Original strand, 14868683 - 14868843
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||||||| ||||||| |||||||||| |||||||||||||   | |||||||| ||    |||||||||||| ||||||||||||||||||||||||||    
T  14868683 tatggaaacggtccctccaaatatctggcgttttggttttagtccctataaaaaaaa----ttggttttagtcactgcaaatatagaatatttggttttg 14868778  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatatt 233  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14868779 gtccttagtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatatt 14868843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 22394501 - 22394335
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||| ||||| | ||||||||  |||||||| ||||  || |||||||||| ||||||||||||||||  |||||||||||||||||||||||||    
T  22394501 tatgaaaatagtcccggtaaatatctagcgttttggatttagttcctataaaaatatttttttggttttagtccatgcaaatatagaatatttggttttg 22394402  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||    
T  22394401 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaacttgatccctataatattca 22394335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 4122954 - 4122788
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||||||||| |||  | ||||||||| ||||||| |||||   | |||||||||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  4122954 tatggaaatgttcctcgtaaatatctggcgttttgcttttagtccctataaaaatatttttttggttttagtccctgtaaatatagaatatttggttttg 4122855  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||    
T  4122854 gtccttgatattttgttttaatcctagtaaaatcatttcatattgaaattggcccctataatattca 4122788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 6542635 - 6542470
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||| ||||||||| | |||||| ||||   | |||||||| ||   |||| |||||||| |||||||||||||||||||||||||     
T  6542635 tatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaaaaaaaatttg-ttttagtccctgcaaatatagaatatttggtttta 6542537  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6542536 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 6542470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 29991110 - 29991274
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| ||||||||||| ||||||| || |||||  ||||||   | |||||||||| ||||||| ||||| || ||||||||||| ||||||||||||||    
T  29991110 tatgaaaatggtccctccaaatatttggcgttt--gttttagtccatataaaaatatttttttgattttaatccctgcaaatataaaatatttggttttg 29991207  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29991208 gttcttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 29991274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 40589026 - 40588861
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||||||||||||||||||||||||||  |||||| |||||   | |||||||| ||||||||| |||||||| ||||||||||| ||||||||| ||||    
T  40589026 tatggaaatggtccctgcaaatatctggagttttgcttttaatccctataaaaaaaattttttgtttttagtccctgcaaatataaaatatttgg-tttg 40588928  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
     ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| || |||||||||    
T  40588927 atccttggtattttgttttaattcttgtaaaatcatttcatattaaaattggtctctataatattca 40588861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 18785991 - 18786150
Alignment:
Q  72 ggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtc 171  Q
    ||||||||| ||||||||||| || | |||||||||||   | |||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||    
T  18785991 ggaaatggttcctgcaaatat-tggcattttggttttagtccctataaaaatatttttttggttttagtccttgcaaatatagaatatttggttttggtc 18786089  T
Q  172 cttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  18786090 cttggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 18786150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 58 - 232
Target Start/End: Original strand, 22394119 - 22394293
Alignment:
Q  58 taaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaat 157  Q
    ||||||| || |||| |||| ||||||||||||||||||| |||||||||||   | | |||||||| |||||||||||||||| ||||||||||| ||     
T  22394119 taaggcttaaatatgaaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaa 22394218  T
Q  158 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||||| || |||||||||||| |||||||||||  | ||||||||| | ||||||| ||||||||    
T  22394219 atttggttttggtccctgatattttgttttagtccttgtaaaagtaattcatattggatttggtccttgtaatat 22394293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 74 - 231
Target Start/End: Complemental strand, 3598785 - 3598628
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcct 173  Q
    |||| |||| |||||||||||||| |||||||||||   | | |||||||| |||||||||||||||| |||||||||||| | ||||||||||||||||    
T  3598785 aaatagtccttgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataggaaatttggttttggtcct 3598686  T
Q  174 tggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaata 231  Q
    ||||||||||||||| ||||||||||||   ||||||||| | ||| ||| |||||||    
T  3598685 tggtattttgttttagtccttgtaaaattgattcatattggatttgatccttgtaata 3598628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 218
Target Start/End: Complemental strand, 40589629 - 40589481
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||||||||||||| ||||||| |||||   | |||||||| ||   |||| |||||||| ||||||||||| |||||||||||| |    
T  40589629 tatggaaatggtccctgcaaatatctggcgttttgcttttaatccctataaaaaaaaaaatttgtttttagtccctgcaaatataaaatatttggttt-g 40589531  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaatt 218  Q
     ||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  40589530 atccttggtattttgttttaattcttgtaaaatcatttcatattaaaatt 40589481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 6497578 - 6497406
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||| |||| ||||||||||||||||||| |||||||||||   | | |||||||| ||||||| |||||||  ||||||||||| || ||    
T  6497578 aggcttaaatatgaaaattgtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttgattttagttcctgcaaatataaaaaat 6497479  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||| |||||| |||||||||||| |||||||||||| | ||||||||| | ||||||| ||||||||    
T  6497478 ttggttttgatccttgatattttgttttagtccttgtaaaattaattcatattggatttggtccttgtaatat 6497406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 69 - 232
Target Start/End: Complemental strand, 14869049 - 14868887
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||| |||| ||||||||||||||||||| ||||||||||| || ||  |||||||| |||||||||||||||| ||||||||||| || ||||||||||    
T  14869049 tatgaaaatagtccctgcaaatatctgacattttggttttagtcactg-taaaaatatttttttggttttagtccctgcaaatataaaa-atttggtttt 14868952  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    | ||||||||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  14868951 gatccttggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 14868887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 230
Target Start/End: Original strand, 24490855 - 24491010
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcct 173  Q
    |||| ||||||||||||||||||| |||||||||||   | | |||||||| |||||||||||||||| |||||||||||||| ||||||||||| || |    
T  24490855 aaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaata-ttttttggttttagtccctgcaaatatagaaaatttggttttgatcat 24490953  T
Q  174 tggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaat 230  Q
     |||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||    
T  24490954 cggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaat 24491010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 7133123 - 7133297
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    ||||| || |||| ||||||||| || |||||| || | |||| |||||| |||||| |||||||| ||||||||| ||| |  ||  ||||||||||||    
T  7133123 aggcttaaatatgaaaatggtcc-tgtaaatatatggcattttagttttagtctctt-taaaaatatttttttggtattaattcctataaatatagaata 7133220  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||| ||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||    
T  7133221 tttgattttgatccttgatattttgttttaatcattgtaaaatcatttcatattgaaattgatccctataatattca 7133297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 10461351 - 10461514
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||| |||| ||||||||||||||| | | ||||||||||| ||| || |||||||| ||||||  |||||||| ||||||||||| || ||||||||||    
T  10461351 tatgaaaatagtccctgcaaatatccgtcattttggttttagtct-ttgtaaaaatattttttttattttagtccctgcaaatataaaaaatttggtttt 10461449  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||||||||||| ||||||||||||   || |||||| | ||||||| ||||||||    
T  10461450 ggtccttggtattttgttttagtccttgtaaaattgatttatattggatttggtccttgtaatat 10461514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 232
Target Start/End: Complemental strand, 7133489 - 7133339
Alignment:
Q  85 gcaaatatctgacgttttggtttta--tctcttataaaaata-attttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattt 181  Q
    ||||||||||||  |||||||||||  | |  ||||||||||  |||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||    
T  7133489 gcaaatatctgatattttggttttaatttttgtataaaaatattttttttggttttagtccctgcaaatataaaatttttggttttggtccttggtattt 7133390  T
Q  182 tgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    | ||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  7133389 ttttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 7133339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 117 - 232
Target Start/End: Complemental strand, 15969759 - 15969644
Alignment:
Q  117 taaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaa 216  Q
    |||||||||||||||| |||||||| ||||||||||| || ||||||||||||||||||||||||||||| | | ||||||||||   || ||||||||     
T  15969759 taaaaataattttttgattttagtccctgcaaatataaaaaatttggttttggtccttggtattttgtttaagttcttgtaaaattgatttatattgaat 15969660  T
Q  217 ttggtccctgtaatat 232  Q
    ||||||| ||||||||    
T  15969659 ttggtccttgtaatat 15969644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 59 - 232
Target Start/End: Original strand, 6542255 - 6542428
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| |||| || || ||||||||||||  |||||||||||   | | |||||||| |||||||||||||||| ||||||||||| || |    
T  6542255 aaggcttaaatatgaaaattgttcccgcaaatatctgatattttggttttagtccatgtaaaaatatttttttggttttagtccctgcaaatataaaaaa 6542354  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||| ||||| ||||||||||||| ||||| ||||||||||||   || |||||| | ||||||| ||||||||    
T  6542355 tttgattttgatccttggtattttattttagtccttgtaaaattgatttatattggatttggtccttgtaatat 6542428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 201
Target Start/End: Original strand, 43196907 - 43197039
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||| |||| | |||||||||||| |||||||||||   | | |||||||| |||||||||||||||| ||||||||||| || |||| ||||||    
T  43196907 tatgaaaatagtccttacaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttagttttg 43197006  T
Q  169 gtccttggtattttgttttaatccttgtaaaat 201  Q
    |||||| || |||||||||| ||||||||||||    
T  43197007 gtccttagtgttttgttttagtccttgtaaaat 43197039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 5933196 - 5933294
Alignment:
Q  134 ttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||| ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  5933196 ttttagtccctgcaaatataaaatatttggttttggtctttggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 5933294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 4122648 - 4122746
Alignment:
Q  134 ttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||| ||||||||||| || ||||||||||||||||||||||||||||||| || |||||||||   ||||||||| | ||||||| ||||||||    
T  4122648 ttttagtccctgcaaatataaaaaatttggttttggtccttggtattttgttttagtctttgtaaaattgattcatattggatttggtccttgtaatat 4122746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 25329103 - 25329266
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||| ||||| ||||||||||||  ||||| |||||  || | ||||||||  ||||| ||||||||| || |||||||| || ||||| |||||    
T  25329103 tatgaaaatagtccccgcaaatatctgatattttgattttagttcctgtaaaaatatattttttgttttagtccctacaaatataaaaaatttgattttg 25329202  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||| ||||| ||||||| ||||||||||||   ||||||||| | ||| ||| ||||||||    
T  25329203 gtccttcgtattatgttttagtccttgtaaaattgattcatattggatttgatccttgtaatat 25329266  T

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Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 228
Target Start/End: Complemental strand, 29991414 - 29991320
Alignment:
Q  134 ttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgta 228  Q
    |||||||| || |||||||| || ||||| |||||||| ||| |||||||||||| ||||||||||||   ||||||||| ||||||||| ||||    
T  29991414 ttttagtccctacaaatataaaaaatttgattttggtctttgatattttgttttagtccttgtaaaattgattcatattggaattggtccttgta 29991320  T

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Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 41137428 - 41137355
Alignment:
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||| |||||||||||||||||||| ||||||||||||   ||||||||| | ||||| | ||||||||    
T  41137428 tttggttttagtccttggtattttgttttagtccttgtaaaattgattcatattggatttggttcttgtaatat 41137355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 19204598 - 19204764
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||||||||||||||||||||||| |  ||||||| |||||   |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  19204598 tatggaaatggtccctgcaaatatttagcgttttgattttagtccttataaaaatatttttttggttttagtccctgcaaatatagaatatttggttttg 19204697  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  19204698 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 19204764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 14379490 - 14379324
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||||||||||||  |||||||||||||   | |||||||||| ||||||||||||||||  |||||| |||||||||||||||||     
T  14379490 tatggaaatggtccctgcaaatatcttgcgttttggttttagtccctataaaaatatttttttggttttagtccttgcaaaaatagaatatttggttttt 14379391  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14379390 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 14379324  T

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Target: chr2; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 28921190 - 28921365
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| ||||||||||||||||||||||||||||||| |||||||| |||   | |||||||||| |||||||||||||||| ||||||||||||||||    
T  28921190 aaggcttaactatggaaatggtccctgcaaatatctgatgttttggtattagtccctataaaaata-ttttttggttttagtccctgcaaatatagaata 28921288  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  | |||||||||    
T  28921289 tttgattttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaactggtctttataatattca 28921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 6880350 - 6880184
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||| ||||||  ||||||||| |||||||| ||||   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6880350 tatggaaatagtccctataaatatctggcgttttggatttagtccttataaaaatatttttttggttttagtctctgcaaatatagaatatttggttttg 6880251  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||  |||||||||    
T  6880250 gtccttggtattttgttttaatcattgtaaaatcatttcgtattgaaattggtccccataatattca 6880184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 41594328 - 41594162
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||||||||||||||| |||||||||||   | | |||||||| |||||||||||||||| ||||||||||| ||||||||||||||    
T  41594328 tatggaaatggtccctgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaatatttggttttg 41594229  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  41594228 gtcattgatattttgttttaatccttgtaaaatcatttcatattaaaattggtccctataatattca 41594162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 59 - 235
Target Start/End: Complemental strand, 18369399 - 18369224
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||||||||| | |||||||||||||| |||||||||||||   | |||||||||| |||||||||||||||| ||||||||||||||||    
T  18369399 aaggcttaaatatggaaatgatacctgcaaatatctggcgttttggttttagtccctataaaaata-ttttttggttttagtccctgcaaatatagaata 18369301  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  18369300 tttggttttggtcattgatattttgttttaatccttgtaaaatcatttcatattgagattggtccctataatattca 18369224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 3371308 - 3371474
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||  | ||||||||| |||||||||||||   | | |||||||| |||||||||||||||  ||||||||||||||||||| ||||||    
T  3371308 tatggaaatggtccaggtaaatatctggcgttttggttttagtccctgtaaaaatatttttttggttttagttcctgcaaatatagaatatttagttttg 3371407  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3371408 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 3371474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 69 - 233
Target Start/End: Complemental strand, 7877702 - 7877537
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataatttttt-ggttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||| |||||||||||||||||||||| |||||||||| ||   | |||||||||| |||||| |||||||||| |||||||||||||||||||||||||    
T  7877702 tatgaaaatggtccctgcaaatatctggcgttttggttctagtccctataaaaatattttttttggttttagtccctgcaaatatagaatatttggtttt 7877603  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatatt 233  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||    
T  7877602 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattgaaccctataatatt 7877537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 12806545 - 12806721
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaata-attttttggttttagtctctgcaaatatagaata 158  Q
    ||||| || |||||||||||||| || |||||| || |||||||| ||||   | |||||||||| ||||||| ||||||||| ||||||||||||||||    
T  12806545 aggcttaaatatggaaatggtccttgtaaatatttggcgttttggatttagtccctataaaaatatatttttttgttttagtccctgcaaatatagaata 12806644  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12806645 tttggttttgatccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 12806721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 13572468 - 13572643
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || ||||||||||||||||||||||||||| |||||| ||||||   | |||||||||| ||||||| |||||||| |||||||||||||||     
T  13572468 aaggcttaaatatggaaatggtccctgcaaatatctggcgttttagttttagtccctataaaaatatttttttg-ttttagtccctgcaaatatagaatg 13572566  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | |||||||||    
T  13572567 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatgttgaaattggttcttataatattca 13572643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 59 - 235
Target Start/End: Complemental strand, 30432982 - 30432806
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || ||||||||||||||| ||||||||||||| |||||||||||   | | |||||||| |||||||||||||||| |||||||||||||||     
T  30432982 aaggcttaaatatggaaatggtcccggcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatatagaatt 30432883  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||    
T  30432882 tttggttttggtctttgttattttgttttaatccttgtaaaatcatttcatattgaaattggtgcttataatattca 30432806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 2395154 - 2395329
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || ||||||||||||| ||||||||||||| ||||||| |||||   | |||||||||| |||||||||||||||| |||||||||||||||||    
T  2395154 aggcttaaatatggaaatggtcactgcaaatatctggcgttttgattttagtccctataaaaatatttttttggttttagtccctgcaaatatagaatat 2395253  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||| || || |||||||||    
T  2395254 ttggttttagtccttggtattttattttagtccttgtaaaatcatttcatattgaaattgatctctataatattca 2395329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 29683173 - 29683346
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||| |||||||||||||||||||||| |||||||||||||   | |||||||||| |||||||||||||| | |||||||||||||||||    
T  29683173 aggcttaaatatgaaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatttttttggttttagcccctgcaaatatagaatat 29683272  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  29683273 ttgg-tttggcccttggtattttgttttaatccttgtaaaatcatttcatattgaaattgg-ccctataatattca 29683346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 38873480 - 38873644
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||||||||||||||| ||||||||| ||||||||||||||   | |||||||| ||   |||||||||||||  |||||||||||||||||||||||||    
T  38873480 tatggaaatggtccctccaaatatctaacgttttggttttagtccctataaaaaaaa--atttggttttagtccttgcaaatatagaatatttggttttg 38873577  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  38873578 gtccttggtattttgttttaattcttgtaaaatcatttcatattgaaattggtccctataatattca 38873644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 17458095 - 17457929
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| ||||||| |||||||||||||   ||||| ||||||   | |||||||||| ||||||||||||| |||||||||||||| ||||||| ||||||    
T  17458095 tatgaaaatggttcctgcaaatatctagtgttttcgttttagtccctataaaaatatttttttggttttaatctctgcaaatataaaatatttagttttg 17457996  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17457995 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 17457929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 69 - 222
Target Start/End: Complemental strand, 25318671 - 25318518
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||||||||||||| |||||||||||| |||||||||||||   | | |||||||| ||||||| ||||||||||| ||||||||||||||||| |||||    
T  25318671 tatggaaatggtccttgcaaatatctggcgttttggttttagtccctctaaaaatatttttttgattttagtctctacaaatatagaatatttgattttg 25318572  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtc 222  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25318571 gtctttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtc 25318518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 59 - 235
Target Start/End: Complemental strand, 6164285 - 6164109
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||||| |||| |||||| |||||||| ||||||| |||||   | |||||||||| |||||||||||||||| | ||||||||||||||    
T  6164285 aaggcttaaatatggatatggcccctgctaatatctggcgttttgattttaatccctataaaaatatttttttggttttagtcccagcaaatatagaata 6164186  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||    
T  6164185 tttggttttggtccttagtattttgttttaatccttgtaaaatcatttcatattgaaattagtccttataatattca 6164109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 3948742 - 3948575
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    ||||||||||||||    |||||||||||||||| |||||| || || ||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  3948742 tatggaaatggtcctcataaatatctgacgttttagttttagtccctaataaaaatatttttttggttttagtccctgcaaatatagaatatttggtttt 3948643  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  3948642 ggtcctttatattttgttttaatccttgtaaaatcatttcatattgaaattggtcattataatattca 3948575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 53 - 235
Target Start/End: Complemental strand, 33941069 - 33940888
Alignment:
Q  53 aaatataaggctcaactatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaata 151  Q
    ||||| |||||| || ||||||| ||||| ||| | |||||||||||||||| |||| || ||| |||||||| |||||||||||||||| |||||||||    
T  33941069 aaatagaaggcttaaatatggaa-tggtctctggatatatctgacgttttggctttagtccctt-taaaaatatttttttggttttagtccctgcaaata 33940972  T
Q  152 tagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  33940971 tagaatatttggttttggtcattgatattttgttttaatccttataaaatcatttcatattgaaattggtccctataatattca 33940888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 58 - 223
Target Start/End: Complemental strand, 37609343 - 37609178
Alignment:
Q  58 taaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaat 157  Q
    ||||||| || |||||||||||||| |||||||||||| |||||||||||||   | | |||||||| |||||||||||||||| |||||||||||||||    
T  37609343 taaggcttaaatatggaaatggtccttgcaaatatctggcgttttggttttagtccctctaaaaatatttttttggttttagtccctgcaaatatagaat 37609244  T
Q  158 atttggttttggtccttggtattttg-ttttaatccttgtaaaatcatttcatattgaaattggtcc 223  Q
    |||||||||||||||||||| ||| | |||||||||||||||||| |||||||||||||||||||||    
T  37609243 atttggttttggtccttggtttttagtttttaatccttgtaaaat-atttcatattgaaattggtcc 37609178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 32521480 - 32521647
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataatttt-ttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||||||||||| || | |||||| ||||||||||||||||   ||| |||||||| |||| ||||||||||||  || ||||||| |||||||||||||    
T  32521480 tatggaaatggttccggtaaatatatgacgttttggttttagtccttctaaaaatattttttttggttttagtccttgtaaatataaaatatttggtttt 32521579  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||    
T  32521580 ggtctttggtattttgttttaatctttgtaaaatcatttcatattgaaattggtccttataatattca 32521647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 10748877 - 10748705
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||||||||| | ||| ||||||| || ||||||| |||||   |||||||||| || ||   |||||||||| | | |||||||||||||    
T  10748877 aggcttaaatatggaaatgattcctacaaatatttggcgttttgattttagtccttataaaaaaaaatt---ggttttagtcccagtaaatatagaatat 10748781  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  10748780 ttggttttggtcattggtattttgttttaatccttgtaaaatcatttcatattgaaattggtctctataatattca 10748705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 4171597 - 4171697
Alignment:
Q  135 tttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattc 234  Q
    ||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4171597 tttagtccctgcaaatatagaacatttggttttggtctttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattc 4171696  T
Q  235 a 235  Q
    |    
T  4171697 a 4171697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 74 - 232
Target Start/End: Complemental strand, 4171897 - 4171739
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcc 172  Q
    |||| ||||||||||||||||||| ||||||||||| ||||   |||||||| |||||||||||||||| | ||||||||| || |||||||||||||||    
T  4171897 aaatagtccctgcaaatatctgacattttggttttagtctcgg-taaaaatatttttttggttttagtcccagcaaatataaaaaatttggttttggtcc 4171799  T
Q  173 ttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||| |||||||||||||||||||||| | ||||||||| | ||||||| ||||||||    
T  4171798 ttggtaatttgttttaatccttgtaaaattaattcatattggatttggtccttgtaatat 4171739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 69 - 232
Target Start/End: Complemental strand, 29683551 - 29683388
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||| ||||||||||||||||||| ||||| |||||   | | |||||||| |||||||||||||||| ||||||||||| || |||||||||||    
T  29683551 tatggaaatagtccctgcaaatatctgacattttgattttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttggttttg 29683452  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||||||||||||| ||||||||||||   || |||||| | ||||||| ||||||||    
T  29683451 gtccttggtattttgttttagtccttgtaaaattgatttatattggatttggtccttgtaatat 29683388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 30771149 - 30771240
Alignment:
Q  144 tgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30771149 tgcaaaaatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 30771240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 59 - 232
Target Start/End: Original strand, 18369009 - 18369182
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| |||| ||||||||||||||||||| |||||||||||   | | |||||||| ||||| |||||||||| ||||||||||| || |    
T  18369009 aaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatattttttgggttttagtccctgcaaatataaaaaa 18369108  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||| |||||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  18369109 tttggttttggtctttggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 18369182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 59 - 232
Target Start/End: Complemental strand, 28921580 - 28921407
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| |||| |||||||||||||| |||| |||||||||||   | | |||||||| |||||||||||||||| ||||||||||| || |    
T  28921580 aaggcttaaatatgaaaatagtccctgcaaatatatgacattttggttttaatccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaa 28921481  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||||||| |||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  28921480 tttggttttggtccttgatattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 28921407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 69 - 232
Target Start/End: Complemental strand, 42705329 - 42705166
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||| |||| ||||||||||||||||||| |||||| |||| |||||  |||||||| ||||||||||||||||  |||||||||| || ||||||||||    
T  42705329 tatgaaaatagtccctgcaaatatctgacattttggatttagtctctg-taaaaatatttttttggttttagtcagtgcaaatataaaaaatttggtttt 42705231  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    || |||||||||||||||||||||||||||||||   ||||||||| | ||||||| ||||||||    
T  42705230 ggaccttggtattttgttttaatccttgtaaaattgattcatattggatttggtccttgtaatat 42705166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 59 - 232
Target Start/End: Complemental strand, 12806936 - 12806763
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| |||| |||||||||||||||| || |||||||||||   |   |||||||| |||||||||||||||| ||||||||||| || |    
T  12806936 aaggcttaaatatgaaaattgtccctgcaaatatctaacattttggttttagtccccgtaaaaatatttttttggttttagtcactgcaaatataaaaaa 12806837  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||||||||||||||||||||||| ||||||||||||   ||||||||| | ||||||  ||||||||    
T  12806836 tttggttttggtccttggtattttgttttagtccttgtaaaattgattcatattggatttggtcattgtaatat 12806763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 3948370 - 3948533
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||| |||| |||||||| ||||| ||||  |||||   | |||||||||| |||||||||||||||| ||||||||||| || ||||||||| |    
T  3948370 tatgaaaatagtccatgcaaatacctgacattttaattttagtccctataaaaatatttttttggttttagtccctgcaaatataaaaaatttggtttcg 3948469  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  3948470 gtccttggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 3948533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 10748500 - 10748663
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||| ||| ||||||| ||||||| |||||||||||   | | |||||||| ||||||||||||| || ||||||||||| || |||||||||||    
T  10748500 tatgaaaatagtctctgcaaacatctgacattttggttttagtccctgtaaaaatatttttttggttttaatccctgcaaatataaaaaatttggttttg 10748599  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||| ||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  10748600 gtccttggtactttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 10748663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 58 - 232
Target Start/End: Complemental strand, 2395545 - 2395371
Alignment:
Q  58 taaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaat 157  Q
    ||||||| || |||| |||| ||||||||||||||||||| |||||||||||   | | |||||||| |||||| |||||| || ||||||||||| ||     
T  2395545 taaggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctgtaaaaatattttttttgttttaatccctgcaaatataaaaa 2395446  T
Q  158 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||| |||||||||||| |||||||||| | ||||||||||||   ||||||||| | ||||||| ||||||||    
T  2395445 atttgattttggtccttgatattttgtttaagtccttgtaaaattgattcatattggatttggtccttgtaatat 2395371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 7877329 - 7877493
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataatttt-ttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||| |||| |||||||||||||||  || ||||| || ||  || | |||||||| |||| |||||||||||| ||||||||||| || ||||||||||    
T  7877329 tatgaaaatagtccctgcaaatatcatacattttgattgtagttcctgtaaaaatattttttttggttttagtccctgcaaatataaaaaatttggtttt 7877428  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  7877429 ggtccttggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 7877493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 14379119 - 14379282
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||| |||| |||||||||||||| |||||||||||   | | |||||||| |||||||||||||||| |||||||| || || |||||||||||    
T  14379119 tatgaaaatagtccttgcaaatatctgacattttggttttagtccctgtaaaaatatttttttggttttagtccctgcaaatgtaaaaaatttggttttg 14379218  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||| |||||||| |||| ||||||||||||   ||||||||| | ||||||  ||||||||    
T  14379219 gtcctttgtattttgatttagtccttgtaaaattgattcatattggatttggtcattgtaatat 14379282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 41593970 - 41594120
Alignment:
Q  82 cctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattt 181  Q
    |||||||||||||||  |||||||||||   | | |||||||| |||||||||||||||  |||||||||||||| |||||||||||||||||| |||||    
T  41593970 cctgcaaatatctgatattttggttttagtccctgtaaaaatatttttttggttttagttcctgcaaatatagaaaatttggttttggtccttgatattt 41594069  T
Q  182 tgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||| || |||||||||   || |||||| | ||||||| ||||||||    
T  41594070 tgttttagtctttgtaaaattgatttatattggatttggtccttgtaatat 41594120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 164 - 235
Target Start/End: Original strand, 42705053 - 42705124
Alignment:
Q  164 ttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42705053 ttttggtccttcgtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 42705124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 232
Target Start/End: Complemental strand, 19204980 - 19204806
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttgg-ttttagtctctgcaaatatagaat 157  Q
    |||||| || |||| |||| ||||||| ||||||| | | |||||||||||   ||| |||||||| ||||||   |||||||| ||||||||||| ||     
T  19204980 aaggcttaaatatgaaaatagtccctgtaaatatccgtcattttggttttagtccttgtaaaaatatttttttttattttagtccctgcaaatataaaaa 19204881  T
Q  158 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||||||||||||||||||||||| |||||||||    || |||||||| ||||||| ||||||||    
T  19204880 atttggttttggtccttggtattttgttttaatacttgtaaaaatgattaatattgaatttggtccttgtaatat 19204806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 232
Target Start/End: Original strand, 30432607 - 30432764
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcct 173  Q
    |||| ||||||||||||||||||| |||||||||||   | | ||||| || ||||||| |||||||| ||| ||| | | || ||||||||||||||||    
T  30432607 aaatagtccctgcaaatatctgacattttggttttagtccctgtaaaagtatttttttgattttagtccctgtaaaaacaaaa-atttggttttggtcct 30432705  T
Q  174 tggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  30432706 tggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 30432764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 232
Target Start/End: Complemental strand, 3371631 - 3371516
Alignment:
Q  117 taaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaa 216  Q
    |||||||| |||||| ||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||| ||||||||||||   ||||||||| |     
T  3371631 taaaaatatttttttagttttagtccctgcaaatataaaaaatttggttttgatccttggtattttgttttagtccttgtaaaattgattcatattggat 3371532  T
Q  217 ttggtccctgtaatat 232  Q
    ||||| | ||||||||    
T  3371531 ttggttcttgtaatat 3371516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 232
Target Start/End: Original strand, 37608952 - 37609125
Alignment:
Q  58 taaggctcaactatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaa 156  Q
    ||||||| || |||| |||  ||||||||||| ||||||| ||||||||||| || ||   |||||||||||||||  |||||||  |||||||||| ||    
T  37608952 taaggcttaaatatgaaaaaagtccctgcaaa-atctgacattttggttttagtcactgg-aaaaataattttttgtgtttagtccttgcaaatataaaa 37609049  T
Q  157 tatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
     ||||||||||||||||||||||||||||||  ||||||||||||   ||||||||| | ||||||| ||||||||    
T  37609050 aatttggttttggtccttggtattttgtttttgtccttgtaaaattgattcatattggatttggtccttgtaatat 37609125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 201
Target Start/End: Original strand, 33940678 - 33940819
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||| |||| |||||||||||||||| || ||||| |||||   | | |||||||| |||||| ||||||||  ||||||||||| || ||    
T  33940678 aggcttaaatatgaaaatagtccctgcaaatatcttacattttgattttagtccctgtaaaaatatttttttagttttagttcctgcaaatataaaaaat 33940777  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaat 201  Q
    |||||||||||||||| |||||||||||  ||||||||||||    
T  33940778 ttggttttggtccttgatattttgtttttgtccttgtaaaat 33940819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 232
Target Start/End: Original strand, 25318365 - 25318485
Alignment:
Q  112 tcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatat 211  Q
    |||| |||||||| ||||||||||||||| || ||||||||| || | |||||||||||||||| |||||||||||  ||||| ||||||   |||||||    
T  25318365 tcttgtaaaaatatttttttggttttagtttcagcaaatataaaaaaattggttttggtccttgatattttgtttttgtccttataaaattgattcatat 25318464  T
Q  212 tgaaattggtccctgtaatat 232  Q
    |||| ||||||| ||||||||    
T  25318465 tgaatttggtccttgtaatat 25318485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 6163969 - 6164067
Alignment:
Q  134 ttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||| ||||||||||||||| || |||| |||||||||||||||||||||||||| ||||||||||||   ||||||||||| ||||| | ||||||||    
T  6163969 tttttgtctctgcaaatataaaaaatttagttttggtccttggtattttgttttagtccttgtaaaattgattcatattgaatttggttcttgtaatat 6164067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 6880038 - 6880142
Alignment:
Q  128 ttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgt 227  Q
    |||||||||||||| ||||||||||| || ||||| ||||||||||||||||||||||||| ||| ||||||||   ||||||||| | ||||||| | |    
T  6880038 ttttggttttagtccctgcaaatataaaaaatttgattttggtccttggtattttgttttagtccatgtaaaatttattcatattggatttggtccttat 6880137  T
Q  228 aatat 232  Q
    |||||    
T  6880138 aatat 6880142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 84 - 232
Target Start/End: Complemental strand, 13572833 - 13572685
Alignment:
Q  84 tgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttg 183  Q
    ||||||||| |||| |||||||||||   | | |||||||| |||||||||||||||| | ||||||||| || ||||| ||||||  ||| |||| |||    
T  13572833 tgcaaatatatgacattttggttttaatccctgtaaaaatatttttttggttttagtcccagcaaatataaaaaatttgattttggcactttgtatattg 13572734  T
Q  184 ttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  13572733 ttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 13572685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 17457789 - 17457887
Alignment:
Q  134 ttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||  ||||||||||| || ||| |||||||||||||| |||||||||||| |||||||||||| | ||||||||| | ||||||| ||||||||    
T  17457789 ttttagttcctgcaaatataaaaaattaggttttggtccttgatattttgttttagtccttgtaaaattaattcatattggatttggtccttgtaatat 17457887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 228
Target Start/End: Complemental strand, 32521795 - 32521693
Alignment:
Q  126 ttttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccct 225  Q
    |||||| |||||| || ||||||||||| || |||||||||||||||||| |||||||||||  ||||||||||||   ||||||||||| || |||| |    
T  32521795 ttttttagttttaatccctgcaaatataaaaaatttggttttggtccttgatattttgtttttgtccttgtaaaattgattcatattgaatttagtcctt 32521696  T
Q  226 gta 228  Q
    |||    
T  32521695 gta 32521693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 13278057 - 13278110
Alignment:
Q  56 tataaggctcaactatggaaatggtccc-tgcaaatatctgacgttttggtttt 108  Q
    ||||||||| || ||||||||||||||| |||||||||||||||||||||||||    
T  13278057 tataaggcttaaatatggaaatggtcccctgcaaatatctgacgttttggtttt 13278110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 42704985 - 42705059
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggt 134  Q
    |||||| || |||| |||||||||||||||||||||| ||||||| ||||| | | ||||| |||| |||||||||    
T  42704985 aaggcttaaatatgaaaatggtccctgcaaatatctggcgttttgcttttagc-cctataataatatttttttggt 42705059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 4726010 - 4726064
Alignment:
Q  181 ttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||||||| |  |||||||||  |||||||||| |||||    
T  4726010 ttgttttaatccttgtaaaatcatattgtattgaaatcagtccctgtaacattca 4726064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 35510990 - 35510901
Alignment:
Q  144 tgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatatt 233  Q
    |||||||||||| | ||| |||||| ||||| || ||||||| || ||| |||||||||  |||||||| |||||| | ||| |||||||    
T  35510990 tgcaaatatagatttttttgttttgatccttagtgttttgttctagtccatgtaaaatctattcatattaaaattgattcctataatatt 35510901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 6e-64; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 13154236 - 13154411
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||||||||||||||||||||||||||  ||||||||||||   | | |||||||| |||||||||||||||| |||||||||||||||||    
T  13154236 aggcttaaatatggaaatggtccctgcaaatatctggtgttttggttttagtccctctaaaaatatttttttggttttagtccctgcaaatatagaatat 13154335  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13154336 ttgattttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 13154411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 31403299 - 31403124
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||||||||||||||||||||||||||  ||||||||||||  ||||||||||||| |||||||||||||||| || ||||||||||||||    
T  31403299 aggcttaaatatggaaatggtccctgcaaatatctggtgttttggttttagttcttataaaaatatttttttggttttagtcccttcaaatatagaatat 31403200  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||    
T  31403199 ttggttttggtcctttgtattttgttttaatccttgtaaaatcatttcttattgagattggtccctataatattca 31403124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 31685676 - 31685842
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||||||| |||||||||||||||||  |||||||||||||   | |||||||||| ||||||||||||||||  |||||||||||||||||||||||||    
T  31685676 tatggaaaaggtccctgcaaatatctagcgttttggttttaatccctataaaaatatttttttggttttagtccatgcaaatatagaatatttggttttg 31685775  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31685776 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 31685842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 58 - 235
Target Start/End: Original strand, 6943652 - 6943829
Alignment:
Q  58 taaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaat 157  Q
    ||||||| || ||||||||||||||| |||||||| || |||||||||||||   | |||||||||| ||||||| |||||||| |||||||||||||||    
T  6943652 taaggcttaaatatggaaatggtccccgcaaatatttggcgttttggttttagtccctataaaaatatttttttgattttagtccctgcaaatatagaat 6943751  T
Q  158 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  6943752 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattagtccctataatattca 6943829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 9180042 - 9180217
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||| |||||||||||||||||||||| ||||||| |||||  || |||||||||| ||||||||||||||||  ||||||||||||||||    
T  9180042 aggcttaaatatgaaaatggtccctgcaaatatctggcgttttgattttaattcctataaaaatatttttttggttttagtccatgcaaatatagaatat 9180141  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9180142 ttggttgtggtccttggttttttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 9180217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 26479671 - 26479505
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||||||||||||| |||||||||||||   | |||||||| ||   ||||||||||||| ||||||||||||||||||||||||||    
T  26479671 tatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaaaaaaaatttggttttagtccctgcaaatatagaatatttggttttg 26479572  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  26479571 gtccttagtattttgttttaatccttgtaaaatcatttcatattgaaattagtccctataatattca 26479505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 2835122 - 2835297
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || ||||||||||||| |||||||||||||| ||||||||||||  |  |||||||||| |||||||||||||||||||| ||||||| |||||    
T  2835122 aggcttaaatatggaaatggtctctgcaaatatctgatgttttggttttagtttctataaaaatatttttttggttttagtctctgtaaatataaaatat 2835221  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||||| |||||||||    
T  2835222 ttggttttggtcctcggtattttgttttaatcattgtaaaatcatttcgtactgaaattggtccctataatattca 2835297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 69 - 233
Target Start/End: Original strand, 6891785 - 6891948
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaata-attttttggttttagtctctgcaaatatagaatatttggttt 166  Q
    ||||||||||||||||||||||||||| |||||| |||||| ||||   ||||||||  ||||||| |||||||| ||||||||||||||||||||||||    
T  6891785 tatggaaatggtccctgcaaatatctggcgtttttgttttagtctc---taaaaatattttttttgtttttagtccctgcaaatatagaatatttggttt 6891881  T
Q  167 tggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatatt 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  6891882 tggtccttggtattttgttttaatccttgtaaaatcatttcatattaaaattggtccctataatatt 6891948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 220510 - 220684
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || ||||||||||||||||| ||||||||| | |||||| ||||   | |||||||||| |||||||||||||||| |||||||||||||||||    
T  220510 aggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaata-ttttttggttttagtccctgcaaatatagaatat 220608  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| || |||||||||    
T  220609 ttggttttggtccttggtattttgttttaatccttataaaatcattttatattgaaattggtcactataatattca 220684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 689665 - 689839
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || ||||||||||||||||| ||||||||| | |||||| ||||   | |||||||||| |||||||||||||||| |||||||||||||||||    
T  689665 aggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaata-ttttttggttttagtccctgcaaatatagaatat 689763  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| || |||||||||    
T  689764 ttggttttggtccttggtattttgttttaatccttataaaatcattttatattgaaattggtcactataatattca 689839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 734133 - 734307
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || ||||||||||||||||| ||||||||| | |||||| ||||   | |||||||||| |||||||||||||||| |||||||||||||||||    
T  734133 aggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaata-ttttttggttttagtccctgcaaatatagaatat 734231  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| || |||||||||    
T  734232 ttggttttggtccttggtattttgttttaatccttataaaatcattttatattgaaattggtcactataatattca 734307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 858029 - 858203
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || ||||||||||||||||| ||||||||| | |||||| ||||   | |||||||||| |||||||||||||||| |||||||||||||||||    
T  858029 aggcttaaatatggaaatggtccctgtaaatatctggcattttggatttagtccctataaaaata-ttttttggttttagtccctgcaaatatagaatat 858127  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| || |||||||||    
T  858128 ttggttttggtccttggtattttgttttaatccttataaaatcattttatattgaaattggtcactataatattca 858203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 24332267 - 24332434
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataatttt-ttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||| ||||| ||| || |||||| ||||||||||||||||   | |||||||||| |||| |||||||||||| ||||||||||||||||||||||||     
T  24332267 tatgaaaatgatccttgtaaatatatgacgttttggttttaatccctataaaaatattttttttggttttagtccctgcaaatatagaatatttggtttg 24332366  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24332367 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 24332434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 31186380 - 31186545
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||||||||||||| |||||||||||||   | |||||||||| ||||||| |||||||| ||||||||||||||||||||||||||    
T  31186380 tatggaaatggtccctgcaaatatctggcgttttggttttagtccctataaaaatatttttttgattttagtccctgcaaatatagaatatttggttttg 31186479  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||| |||||||||||||||||| ||||||||||||||||||||| |||| ||||| | |||||||||    
T  31186480 gtcattggtattttgttttaat-cttgtaaaatcatttcatattaaaatcggtccttataatattca 31186545  T

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Target: chr8; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 18764662 - 18764496
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||||||||||||||||||||| |||||||||| ||   | ||||||  |  ||| || ||||||||| ||||||||||||||||||||||||||    
T  18764662 tatgaaaatggtccctgcaaatatctggcgttttggttatagtccctataaattttgtttatttgttttagtccctgcaaatatagaatatttggttttg 18764563  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  18764562 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataaaattca 18764496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 37586393 - 37586228
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||||||||||||| | |||||||||| ||||||||||||||   |||||||||||  |||||||||||||||| || |||||| | |||||||||||||    
T  37586393 tatggaaatggtccttacaaatatctggcgttttggttttattctttataaaaatatatttttggttttagtct-tgtaaatattggatatttggttttg 37586295  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||    
T  37586294 gtccttggtattttgttttaatcctggtaaaatcatttcatattgaaattggtccatataatattca 37586228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 13405445 - 13405620
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||| ||||||||||||||||||||||   ||||| |||||  | ||||||||||| || ||||||||||| | ||| |||||||||||||    
T  13405445 aggcttaaatatgcaaatggtccctgcaaatatctggtattttgattttagtttttataaaaatatttgtttggttttagaccctgtaaatatagaatat 13405544  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    || ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||    
T  13405545 tttgttttggtctttggtattttgttttaatcattgtaaaatcatttcatattgaaattggtccttataatattca 13405620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 74 - 232
Target Start/End: Complemental strand, 3273092 - 3272934
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcct 173  Q
    |||| ||||||||||||||||||| |||||||||||   | |||||||||| ||||||| |||||||| ||||||||||| || | ||||||||||||||    
T  3273092 aaatagtccctgcaaatatctgacattttggttttagtccctataaaaatatttttttgattttagtccctgcaaatataaaaaacttggttttggtcct 3272993  T
Q  174 tggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||||| ||||||||||||   ||||||||| | ||||||  ||||||||    
T  3272992 tggtattttgttttagtccttgtaaaattgattcatattggatttggtctttgtaatat 3272934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 83 - 232
Target Start/End: Complemental strand, 13405811 - 13405662
Alignment:
Q  83 ctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtatttt 182  Q
    |||||||||| |||| |||||||||||   | | |||||||| |||||||||||||||| || |||||||| || |||||||||||||||||||||||||    
T  13405811 ctgcaaatatttgacattttggttttaatccctgtaaaaatatttttttggttttagtcccttcaaatataaaaaatttggttttggtccttggtatttt 13405712  T
Q  183 gttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  13405711 gttttattccttgtaaaattgattcatattggatttggtccttgtaatat 13405662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 51 - 232
Target Start/End: Original strand, 18764274 - 18764454
Alignment:
Q  51 aaaaatataaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaat 150  Q
    ||||||||| |||| || |||| |||| ||||||||||||||||||| |||||||||||   ||| |||||||| ||||||||||| |||| || |||||    
T  18764274 aaaaatata-ggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccttgtaaaaatatttttttggtttgagtcccttcaaat 18764372  T
Q  151 atagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||| ||  ||||||||||||| |||||||||||||||  ||||||||||||   ||||||||| | ||||||| ||||||||    
T  18764373 ataaaaactttggttttggtctttggtattttgtttttgtccttgtaaaattgattcatattggatttggtccttgtaatat 18764454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 3272816 - 3272892
Alignment:
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3272816 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 3272892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 6944043 - 6943871
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || |||| |||| ||||||||||||||||||| |||||||||||  || | |||||||| |||||||||||||||| ||||||||||  || ||    
T  6944043 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagttcctgtaaaaatatttttttggttttagtccctgcaaatatgaaaaat 6943944  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||| ||||||| |||| |||||| ||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  6943943 ttgattttggttcttgatattttattttagtccttgtaaaattgattcatattggatttggtccttgtaatat 6943871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 69 - 232
Target Start/End: Complemental strand, 13154616 - 13154453
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||| |||||| |||||||||||| ||||| |||||   | | |||||||| |||||||||||||||| ||||||||||| || | |||||||||    
T  13154616 tatgaaaatagtccctacaaatatctgacattttgattttaatccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaaattggttttg 13154517  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||||||||||||  ||||||||||||   ||||||||| | ||||||| ||||||||    
T  13154516 gtccttggtattttgtttttgtccttgtaaaattgattcatattggatttggtccttgtaatat 13154453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 57 - 232
Target Start/End: Original strand, 31402906 - 31403082
Alignment:
Q  57 ataaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttgg-ttttagtctctgcaaatataga 155  Q
    |||||||| || |||| |||| ||||||||||||||||||  |||||||||||   ||| |||||||| ||||| || |||||||| ||||||||||| |    
T  31402906 ataaggcttaaatatgaaaatagtccctgcaaatatctgatattttggttttagtccttgtaaaaatattttttggggttttagtccctgcaaatataaa 31403005  T
Q  156 atatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||||||||| |||||| ||||||||  || |||||||||   ||||||||| | ||||||| ||||||||    
T  31403006 atatttggttttggtcgttggtaatttgttttcgtctttgtaaaattgattcatattggatttggtccttgtaatat 31403082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 80 - 201
Target Start/End: Complemental strand, 9180411 - 9180290
Alignment:
Q  80 tccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtat 179  Q
    |||||||||||||||||| |||||||||||   | | |||||||| | ||||||||||||||  |||||||||| || |||||||||||||||||| |||    
T  9180411 tccctgcaaatatctgacattttggttttaatccctgtaaaaatattgttttggttttagtccttgcaaatataaaaaatttggttttggtccttgatat 9180312  T
Q  180 tttgttttaatccttgtaaaat 201  Q
    ||||||||| ||||||||||||    
T  9180311 tttgttttagtccttgtaaaat 9180290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 24332581 - 24332476
Alignment:
Q  126 ttttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccct 225  Q
    |||||| ||||||||| |||||| |||| || ||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||| ||||||| |    
T  24332581 tttttttgttttagtccctgcaa-tataaaaaatttggttttggtccttggtattttgttttagtccttgtaaaattgattcatattgaatttggtcctt 24332483  T
Q  226 gtaatat 232  Q
    |||||||    
T  24332482 gtaatat 24332476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 198
Target Start/End: Complemental strand, 2835479 - 2835342
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    ||||| || |||| |||| ||||| ||||||||||||| ||||||||||| || ||  |||||||| ||||||| |||||||| ||||||||||| || |    
T  2835479 aggcttaaatatgaaaatagtccccgcaaatatctgacattttggttttagtcgctg-taaaaatatttttttgattttagtccctgcaaatataaaaaa 2835381  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaa 198  Q
    || ||||||||| ||||||||||||||||| |||||||||    
T  2835380 tt-ggttttggttcttggtattttgttttagtccttgtaa 2835342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 201
Target Start/End: Complemental strand, 31685989 - 31685916
Alignment:
Q  128 ttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaat 201  Q
    |||||||||||||| ||||||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||    
T  31685989 ttttggttttagtccctgcaaatataaaaaatttggttttggtccttagtattttgttttagtccttgtaaaat 31685916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 31186691 - 31186587
Alignment:
Q  128 ttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgt 227  Q
    |||||||||||||| ||| |||| || || |||||||||||||||||||||||||||| || ||||||||||||   ||||||||| | ||||||| | |    
T  31186691 ttttggttttagtccctgtaaatctaaaaaatttggttttggtccttggtattttgttgtagtccttgtaaaattgattcatattggatttggtccttat 31186592  T
Q  228 aatat 232  Q
    |||||    
T  31186591 aatat 31186587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 27993579 - 27993490
Alignment:
Q  144 tgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatatt 233  Q
    |||||||||  |||| || ||||||||||||||| |||||||||| ||| |||||||||  |||||| |||||||||||||| |||||||    
T  27993579 tgcaaatatgaaataatttgttttggtccttggtgttttgttttagtccctgtaaaatccattcataatgaaattggtccctataatatt 27993490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 28050881 - 28050792
Alignment:
Q  144 tgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatatt 233  Q
    |||||||||  |||| || ||||||||||||||| |||||||||| ||| |||||||||  |||||| |||||||||||||| |||||||    
T  28050881 tgcaaatatgaaataatttgttttggtccttggtgttttgttttagtccctgtaaaatccattcataatgaaattggtccctataatatt 28050792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 26479392 - 26479460
Alignment:
Q  130 ttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaa 198  Q
    |||||||||||| ||||||||||| ||  ||||||||||||| |||||||||||||||| |||||||||    
T  26479392 ttggttttagtcactgcaaatataaaaattttggttttggtcattggtattttgttttagtccttgtaa 26479460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 20112533 - 20112573
Alignment:
Q  181 ttgttttaatccttgtaaaatcatttcatattgaaattggt 221  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20112533 ttgttttaatccttgtaaaatcatttcatattgaaattggt 20112573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 37586113 - 37586187
Alignment:
Q  158 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatatt 233  Q
    |||| |||||||||||||||||||||||||| ||||||||||||   ||||||||| | ||||||| |||||||||    
T  37586113 atttagttttggtccttggtattttgttttagtccttgtaaaatttattcatattg-atttggtccttgtaatatt 37586187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 6892065 - 6891992
Alignment:
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||||||||| |||||||||| ||||||||||||   ||||||||  | ||||||| ||||||||    
T  6892065 tttggttttggtccttggtgttttgttttagtccttgtaaaattgattcatattcgatttggtccttgtaatat 6891992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 3272745 - 3272817
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataatttttt 131  Q
    |||||| || |||| ||||| |||||||||||||||| |||||||||||||   | ||||||||| |||||||    
T  3272745 aaggcttaaatatgtaaatgatccctgcaaatatctggcgttttggttttagtccctataaaaattatttttt 3272817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 20112735 - 20112651
Alignment:
Q  127 tttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatat 211  Q
    ||||||||||||||  ||  ||||||| || ||||| ||||  |||||| |||||||||||| ||||| |||||| | |||||||    
T  20112735 tttttggttttagttcctctaaatataaaaaatttgattttaatccttgatattttgttttagtccttctaaaattaattcatat 20112651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 109
Target Start/End: Complemental strand, 31186721 - 31186681
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggtttta 109  Q
    |||| |||| ||||||||||||||||||| |||||||||||    
T  31186721 tatgaaaatagtccctgcaaatatctgacattttggtttta 31186681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 119; Significance: 6e-61; HSPs: 2)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 4764 - 4598
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||||||||||||||||||||||| ||||||||||||||||   | ||||||  |  |||||||||||||||| ||||||||||| ||||||||||||||    
T  4764 tatggaaatggtccctgcaaatatttgacgttttggttttagtccctataaatttttttttttggttttagtccctgcaaatatataatatttggttttg 4665  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4664 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctataatattca 4598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 4500 - 4556
Alignment:
Q  176 gtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  4500 gtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 4556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 118; Significance: 2e-60; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 58 - 235
Target Start/End: Complemental strand, 212800 - 212623
Alignment:
Q  58 taaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaat 157  Q
    ||||||| || ||||||||||||||| | |||||||||| ||||||||||||   | |||||||||| |||||||||||||||| |||||||||||||||    
T  212800 taaggcttaaatatggaaatggtccccgtaaatatctgatgttttggttttagtccctataaaaatatttttttggttttagtccctgcaaatatagaat 212701  T
Q  158 atttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  212700 atttggttttggtctttcgtattttgttttaatccttgtaaaatcatttcatattgaaattggttcctataatattca 212623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 54 - 232
Target Start/End: Original strand, 212403 - 212581
Alignment:
Q  54 aatataaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatata 153  Q
    ||||| ||||| || |||| |||| ||||| ||||||||| ||| |||||||||||   | | |||||||| ||||||||||| |||| ||||||||  |    
T  212403 aatattaggcttaaatatgaaaatagtccccgcaaatatcagacattttggttttagtccctgtaaaaatatttttttggtttaagtccctgcaaattaa 212502  T
Q  154 gaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
     ||  |||||||||||||||||||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  212503 aaaattttggttttggtccttggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 212581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 59 - 235
Target Start/End: Original strand, 25119 - 25295
Alignment:
Q  59 aaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    |||||| || |||| ||||||||||   |||||| ||||||||||||||||   | |||||||||| |||||||||||||||| ||| ||||||||||||    
T  25119 aaggcttaaatatgaaaatggtcccaataaatatttgacgttttggttttagtccctataaaaatatttttttggttttagtccctgtaaatatagaata 25218  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  25219 tttggttttggtccttcgtattttgttttaatccttgtaaaatcatttcatattgaaattggttcctataatattca 25295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 232
Target Start/End: Complemental strand, 25440 - 25325
Alignment:
Q  117 taaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaa 216  Q
    ||||||||||||||||||||||||| ||||||||  | ||| |||||||||||||||||||||||| ||||| ||||||||||||   ||||||||| |     
T  25440 taaaaataattttttggttttagtccctgcaaattaaaaatttttggttttggtccttggtattttattttagtccttgtaaaattgattcatattggat 25341  T
Q  217 ttggtccctgtaatat 232  Q
    ||| ||| ||||||||    
T  25340 ttgatccttgtaatat 25325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 69 - 224
Target Start/End: Complemental strand, 43655 - 43500
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||||||||||| | |||||||||||| |||||||||||||  || ||||||  |  |||||||||||||||| ||||||||||||||||||||||||||    
T  43655 tatggaaatggttcttgcaaatatctggcgttttggttttagttcctataaatttttttttttggttttagtccctgcaaatatagaatatttggttttg 43556  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccc 224  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43555 atccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccc 43500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 74 - 232
Target Start/End: Original strand, 43288 - 43446
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcct 173  Q
    |||| |||||||||||||| |||| |||||||||||   | | ||||||||  ||||| ||||||||| ||||||||||| || ||||||||||||||||    
T  43288 aaatagtccctgcaaatatttgacattttggttttagtccctgtaaaaatatattttttgttttagtccctgcaaatataaaaaatttggttttggtcct 43387  T
Q  174 tggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||||| | ||||||||||   ||||||||| | ||||||| ||||||||    
T  43388 tggtattttgttttagtacttgtaaaattgattcatattggatttggtccttgtaatat 43446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 8928 - 8753
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatat 159  Q
    ||||| || ||||||||||||||| | | |||| || |||||||| ||||   | |||||||||| |||||| ||||||||| |||||||||||||||||    
T  8928 aggctgaaatatggaaatggtccccgtatatatttggcgttttggatttagtccctataaaaatattttttttgttttagtccctgcaaatatagaatat 8829  T
Q  160 ttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||    
T  8828 ttggttttgatccttggtattttgttttaatctttgtaaaatcatttcatattgaaattggtccctaaaatattca 8753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 8547 - 8711
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctct-tataaaaataattttttggttttagtctctgcaaatatagaatatttggtttt 167  Q
    |||| |||| |||||||||||||||| || ||||||||||   ||  | |||||||| |||||||||||||||| ||||||||||| || ||||||||||    
T  8547 tatgaaaattgtccctgcaaatatctaacattttggtttttagtccctgtaaaaatatttttttggttttagtccctgcaaatataaaaaatttggtttt 8646  T
Q  168 ggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    ||||||||||||||||||||| ||||||||||||   ||||||||| | || |||| ||||||||    
T  8647 ggtccttggtattttgttttagtccttgtaaaattgattcatattggatttagtccttgtaatat 8711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 74 - 235
Target Start/End: Complemental strand, 36365 - 36205
Alignment:
Q  74 aaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtcct 173  Q
    |||| |||||||||||||||||||||||| ||||||   | ||||||| || ||||||| |||||||  |||||||||||||||||||||||||| ||||    
T  36365 aaatagtccctgcaaatatctgacgttttagttttagtccctataaaattatttttttg-ttttagttcctgcaaatatagaatatttggttttgatcct 36267  T
Q  174 tggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||    
T  36266 tggtattttgttttaatccttgtaaaatcatttcatattaaaattggtccttataatattca 36205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 36013 - 36163
Alignment:
Q  82 cctgcaaatatctgacgttttggtttt-atctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtatt 180  Q
    |||||||||||||||| |||| ||||| |||| || ||| |||| | ||||||||||||||  |||||||||| || ||||| |||||||| ||| ||||    
T  36013 cctgcaaatatctgacattttcgttttgatct-ttgtaagaatattgttttggttttagtccttgcaaatataaaaaatttgattttggtctttgatatt 36111  T
Q  181 ttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||| ||||||||||||   ||||||||| | | ||||| ||||||||    
T  36112 ttgttttagtccttgtaaaattgattcatattggattcggtccttgtaatat 36163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 69 - 233
Target Start/End: Original strand, 118035 - 118198
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    ||||||||||||||||| ||||||||| |||||||| ||||   |  ||| ||||| |||||||||||||||| |||||||||||||||||||  |||||    
T  118035 tatggaaatggtccctgtaaatatctggcgttttggatttagtccccatataaatatttttttggttttagtccctgcaaatatagaatatttaattttg 118134  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatatt 233  Q
     ||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||    
T  118135 atcctttgtattttgttttaatcc-tgtaaagtcatttcatattgaaattggtccctataatatt 118198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 201
Target Start/End: Complemental strand, 118396 - 118277
Alignment:
Q  82 cctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttggtccttggtattt 181  Q
    |||||||||||||||  ||||||||||    | | |||||||| |||||||||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  118396 cctgcaaatatctgatattttggttttcgtccctgtaaaaatatttttttggttttagtcactgcaaatataaaaaatttggttttggtccttggtattt 118297  T
Q  182 tgttttaatccttgtaaaat 201  Q
    ||||||| ||||||||||||    
T  118296 tgttttagtccttgtaaaat 118277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 80; Significance: 1e-37; HSPs: 3)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 36764 - 36934
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggtttta-tctcttataaaaataattttttggttttagtctctgcaaatatagaata 158  Q
    ||||| || |||| |||| ||||||||||||||||||| ||||||||||| || || |   ||||| |||||||||||||||| ||||||||||| || |    
T  36764 aggcttaaatatgaaaatagtccctgcaaatatctgacattttggttttagtccctga---aaatatttttttggttttagtccctgcaaatataaaaaa 36860  T
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatat 232  Q
    |||||||||||||||||||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||||    
T  36861 tttggttttggtccttggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaatat 36934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 37052 - 36976
Alignment:
Q  159 tttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  37052 tttggttttggtccttggtattttgttttaatccttgtaaaattatttcatattgaaattggtccctataatattca 36976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 37124 - 37044
Alignment:
Q  57 ataaggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggtttt 137  Q
    |||||||| || ||||||||||||||||||||||||||  |||||||||||||   | |||||||||| ||||||||||||    
T  37124 ataaggcttaaatatggaaatggtccctgcaaatatctagcgttttggttttagtccctataaaaatatttttttggtttt 37044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 74; Significance: 4e-34; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 69 - 230
Target Start/End: Complemental strand, 74290 - 74130
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataattttttggttttagtctctgcaaatatagaatatttggttttg 168  Q
    |||| |||| |||||||||||||||| || |||||||||  || |||  ||||||| |||||||||||||||| ||||||||||| || |||||| ||||    
T  74290 tatgaaaatagtccctgcaaatatctaacattttggtttagtc-cttcaaaaaatatttttttggttttagtccctgcaaatataaaaaatttggctttg 74192  T
Q  169 gtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaat 230  Q
    |||||||||||||||||||| ||||||||||||   ||||||||| | ||||||| ||||||    
T  74191 gtccttggtattttgttttagtccttgtaaaattgattcatattggatttggtccttgtaat 74130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 74007 - 74087
Alignment:
Q  155 aatatttggttttggtccttggtattttgttttaatccttgtaaaatcatttcatattgaaattggtccctgtaatattca 235  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| |||||||| |||||||||    
T  74007 aatatttggttttggtccttcgtattttgttttaatccttataaaatcatttcatattaaaactggtccctataatattca 74087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 73939 - 74001
Alignment:
Q  69 tatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaataatttttt 131  Q
    ||||||||||||||||||||||||| | ||||||||||||||  | |||||||||| ||||||    
T  73939 tatggaaatggtccctgcaaatatccggcgttttggttttattccctataaaaatattttttt 74001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 43907 - 43971
Alignment:
Q  60 aggctcaactatggaaatggtccctgcaaatatctgacgttttggttttatctcttataaaaata 124  Q
    ||||| || ||||||||| ||||| ||||||||||| |||||||||||||   ||||||||||||    
T  43907 aggcttaaatatggaaatagtcccggcaaatatctgtcgttttggttttagtccttataaaaata 43971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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