View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17682_high_15 (Length: 302)
Name: NF17682_high_15
Description: NF17682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17682_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 4 - 283
Target Start/End: Complemental strand, 31612127 - 31611848
Alignment:
| Q |
4 |
ttatcagtaactaaattttatttacacacatttgaaccacatatatctagatttcagtgttttagattctaatttgtaactcaagaggacgaaagagata |
103 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31612127 |
ttatcagtaactaaattttatttacacacatttgaactacatatatctagatttcagtgttttagattctaatttgtaactcaagaggacgaaagagata |
31612028 |
T |
|
| Q |
104 |
ctattttattcatttcttacatccttgttaattgtatttcaattataatttgtttgcaaggtcannnnnnngaagagcaaatgaagaagttttattaaat |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
31612027 |
ctattttattcatttcttacatccttgttaattgtatttcaattataatttgtttgcaaggtcatttttttgaagagcaaatgaagaagttttattaaat |
31611928 |
T |
|
| Q |
204 |
catttgtaaagaaactacaaatagtactagacctacaaaaatagatgaaatacaagtagtactatattcacccaactcaa |
283 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
31611927 |
catttgtaaagaaactacaaatagtactagacctacaaaaatagatgaaatacaagaagtactatattcacccaactcaa |
31611848 |
T |
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